View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19097_high_75 (Length: 251)
Name: NF19097_high_75
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_75 |
 |  |
|
| [»] scaffold0692 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 18 - 246
Target Start/End: Original strand, 9498854 - 9499082
Alignment:
| Q |
18 |
atacatgtgttttcccaaacaagcacagcttatagaagctgtgggaatacaaaagatagtatatttactggaatctaggaagaatttcagttatataaga |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9498854 |
atacatgtgttttcccaaacaagcacagcttatagaagctgtgggaatacaaaagatagtatatttactggaatctaggaagaatttcagttatataaga |
9498953 |
T |
 |
| Q |
118 |
gtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagctctggtaggagttctc |
217 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9498954 |
gagggaagcctagagggtgagacattaagaaagtttgttaagagttgtttaggagagaagttctctctggtctaggagcttagctctggtaggagttctc |
9499053 |
T |
 |
| Q |
218 |
tgaactctggtttatcctttcatttcagt |
246 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
9499054 |
tgaactctggtttatcctttcatttcagt |
9499082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 56201173 - 56201220
Alignment:
| Q |
166 |
ttaggagagaagttctctctggtctaggagcttagctctggtaggagt |
213 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
56201173 |
ttaggagagatgttctctctggtctaggagcctagctctggtaggagt |
56201220 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 18846325 - 18846185
Alignment:
| Q |
98 |
agaatttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagct |
197 |
Q |
| |
|
||||||||||||||| ||||| ||| || ||||||| | || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18846325 |
agaatttcagttataaaagaggggggagtctagagg-taaggcattcagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagct |
18846227 |
T |
 |
| Q |
198 |
tagctctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| ||||| |
|
|
| T |
18846226 |
tagctctggtaggagttctcagaactctggtttatcttttca |
18846185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 15660280 - 15660420
Alignment:
| Q |
98 |
agaatttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagct |
197 |
Q |
| |
|
|||||||| |||||| ||||| ||| || |||||| | || |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
15660280 |
agaatttccgttataaaagaggggggagtctagaga-taaggcattcagaaagtttgttaagagttgtttaggagagaagttctttctggtctaggagct |
15660378 |
T |
 |
| Q |
198 |
tagctctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
15660379 |
tagctctggtaggagttctctgaactctggtttatcttttca |
15660420 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 50 - 207
Target Start/End: Complemental strand, 47790458 - 47790300
Alignment:
| Q |
50 |
tagaagctgtgggaatacaaa-agatagtatatttactggaatctaggaagaatttcagttatataagagtgggaagcctagagggtgagacattaagaa |
148 |
Q |
| |
|
||||||||||||||| ||||| | ||| ||| ||| ||||||| |||||||||||||||||| || || ||||| |||||||||||| || | |||| |
|
|
| T |
47790458 |
tagaagctgtgggaacacaaacatttagaataattattggaatcaaggaagaatttcagttattaaacagagggaatcctagagggtgaagcagtcagaa |
47790359 |
T |
 |
| Q |
149 |
agttttttaagagttgtttaggagagaagttctctctggtctaggagcttagctctggt |
207 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
47790358 |
agtttcttaagagttgtttaggagagaagttctctctggtctaggagcttaactctggt |
47790300 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 242
Target Start/End: Original strand, 36692251 - 36692331
Alignment:
| Q |
162 |
ttgtttaggagagaagttctctctggtctaggagcttagctctggtaggagttctctgaactctggtttatcctttcattt |
242 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
36692251 |
ttgtttaggagagaagttctctctgttctaggagcttagctctggtaggagttcatagaactctggttacccctttcattt |
36692331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 148
Target Start/End: Original strand, 15660179 - 15660278
Alignment:
| Q |
50 |
tagaagctgtgggaatacaaa-agatagtatatttactggaatctaggaagaatttcagttatataagagtgggaagcctagagggtgagacattaagaa |
148 |
Q |
| |
|
||||||||||||||||||||| || || ||| ||| |||||| |||| |||||| ||||||| ||||| |||||||||||||||| || ||||||||| |
|
|
| T |
15660179 |
tagaagctgtgggaatacaaacagttataataattattggaatttaggcagaattgcagttattgaagagagggaagcctagagggtcagtcattaagaa |
15660278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 34624350 - 34624211
Alignment:
| Q |
98 |
agaatttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagct |
197 |
Q |
| |
|
||||||| ||||||| ||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
34624350 |
agaattttagttataaaagagagggaagcctagagggtgaggcattaagaaagtttgt-aagagttgtttaggagaaaagttgtctctggtctaggagct |
34624252 |
T |
 |
| Q |
198 |
tagctctggtaggagttctctgaactctggtttatcctttc |
238 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||| |||| |
|
|
| T |
34624251 |
tagctctggtaggagttctctgaactatggttaatcatttc |
34624211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 102 - 246
Target Start/End: Complemental strand, 29403769 - 29403624
Alignment:
| Q |
102 |
tttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagc |
201 |
Q |
| |
|
||||||||||| |||| |||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
29403769 |
tttcagttataaaagatagggaagtctagagggtgattcattcagaaagtttattaagagttgtttaggagagaagttctctctggtcttggagcttggc |
29403670 |
T |
 |
| Q |
202 |
tctggtaggagttctctgaactctggtttatccttt-catttcagt |
246 |
Q |
| |
|
|| ||||| |||||||||||| |||||||||| ||| ||||||||| |
|
|
| T |
29403669 |
tcgggtagaagttctctgaaccctggtttatcatttccatttcagt |
29403624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 238
Target Start/End: Original strand, 20039505 - 20039641
Alignment:
| Q |
102 |
tttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagc |
201 |
Q |
| |
|
||||||||||| ||||| | |||||||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
20039505 |
tttcagttataaaagagagagaagcctagagggtgatgcatacagaaaatttagtaagagttgtctaggagagaagttctttctggtctaggagcttagc |
20039604 |
T |
 |
| Q |
202 |
tctggtaggagttctctgaactctggtttatcctttc |
238 |
Q |
| |
|
||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
20039605 |
tctggtaggagttctctaaactctggtttatcatttc |
20039641 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 29403900 - 29403830
Alignment:
| Q |
78 |
atatttactggaatctaggaagaatttcagttatataagagtgggaagcctagagggtgagacattaagaa |
148 |
Q |
| |
|
||||||| ||||||||||||||| |||||||||| ||||| ||||||||| |||||| || ||||||||| |
|
|
| T |
29403900 |
atatttattggaatctaggaagagtttcagttattaaagagagggaagccttgagggttagtcattaagaa |
29403830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 20039431 - 20039499
Alignment:
| Q |
80 |
atttactggaatctaggaagaatttcagttatataagagtgggaagcctagagggtgagacattaagaa |
148 |
Q |
| |
|
||||| ||||||||||||||| |||||||||| ||||| ||||||||||||||| || ||||||||| |
|
|
| T |
20039431 |
atttattggaatctaggaagagtttcagttattcaagagaaggaagcctagagggttagtcattaagaa |
20039499 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 11375487 - 11375456
Alignment:
| Q |
205 |
ggtaggagttctctgaactctggtttatcctt |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
11375487 |
ggtaggagttctctgaactctggtttatcctt |
11375456 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 20293343 - 20293201
Alignment:
| Q |
98 |
agaatttcagttatataagagtgggaagcc-tagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagc |
196 |
Q |
| |
|
||||||||||||||| | ||| || ||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
20293343 |
agaatttcagttatagaggagaggaaagccctagagggggaggcattcagaaagtttgctaagagttgtttaggagagaagttctctcttgtataggagc |
20293244 |
T |
 |
| Q |
197 |
ttagctctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20293243 |
ttagctctggtaggagttctctgaactctggtttatcctttca |
20293201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 21079974 - 21079832
Alignment:
| Q |
98 |
agaatttcagttatataagagtgggaagcc-tagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagc |
196 |
Q |
| |
|
||||||||||||||| | ||| || ||||| ||||||| ||| |||| ||||||||| |||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
21079974 |
agaatttcagttatagaggagaggaaagccctagagggggaggcattcagaaagtttgctaagagttgtttaggagagaagttctctcttgtataggagc |
21079875 |
T |
 |
| Q |
197 |
ttagctctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21079874 |
ttagctctggtaggagttctctgaactctggtttatcctttca |
21079832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 102 - 239
Target Start/End: Complemental strand, 13955888 - 13955753
Alignment:
| Q |
102 |
tttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagc |
201 |
Q |
| |
|
||||||||||| ||||| ||| || ||||||| | || |||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13955888 |
tttcagttataaaagaggggggagtctagagg-taaggcattcagaaagttgct-aagagttgtttaggagagaagttctctctggtctaggagcttagc |
13955791 |
T |
 |
| Q |
202 |
tctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13955790 |
tctggtaggagttctctgaactctggttaatcctttca |
13955753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 229
Target Start/End: Complemental strand, 2108409 - 2108287
Alignment:
| Q |
108 |
ttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagctctgg- |
206 |
Q |
| |
|
||||| ||||| ||||||||||| | ||||| |||| |||||| ||||||||||| ||||||||||| || |||||||||||||||| ||||||||| |
|
|
| T |
2108409 |
ttatagaagagagggaagcctagtgagtgagtcattgggaaagtattttaagagtttgttaggagagaaattttctctggtctaggagcctagctctggt |
2108310 |
T |
 |
| Q |
207 |
taggagttctctgaactctggtt |
229 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
2108309 |
taggagttcatagaactctggtt |
2108287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 29355460 - 29355339
Alignment:
| Q |
107 |
gttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagctctgg |
206 |
Q |
| |
|
|||||| ||||| || |||||||||| || || |||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
29355460 |
gttataaaagagaggaaagcctagagagtaaggcattcataaagtttgttaagagttgtttaggagagaagttctatctggtctaggagcttagctctgg |
29355361 |
T |
 |
| Q |
207 |
taggagttctctgaactctggt |
228 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
29355360 |
taggagttctctgagctctggt |
29355339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 19058986 - 19058850
Alignment:
| Q |
100 |
aatttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagctta |
199 |
Q |
| |
|
||||||||||| | ||||| ||||||||||||||||| | ||||| |||||| ||||||||||||||||||| |||| ||||||||||||||| || |
|
|
| T |
19058986 |
aatttcagttaaaaaagagacggaagcctagagggtgaatcgttaaggaagtttgttaagagttgtttaggagataagt---ctctggtctaggagccta |
19058890 |
T |
 |
| Q |
200 |
gctctggtaggagttctctgaactctggtttatcctttca |
239 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19058889 |
gctctggtaggagttctcttccctctggtttatcctttca |
19058850 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 7492158 - 7492223
Alignment:
| Q |
178 |
ttctctctggtctaggagcttagctctggtaggagttctctgaactctggtttatcctttcatttc |
243 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||||||||| ||| ||||||| |||| |||| |
|
|
| T |
7492158 |
ttctctctggtctacgagcttagctctggtaggtattctctgaattctagtttatcttttcgtttc |
7492223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 19059060 - 19058990
Alignment:
| Q |
78 |
atatttactggaatctaggaagaatttcagttatataagagtgggaagcctagagggtgagacattaagaa |
148 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| || ||||||||| |
|
|
| T |
19059060 |
atattcactggaatctaggaagaatttcagttattaaagagaaggaatcctagagggctagtcattaagaa |
19058990 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 126 - 238
Target Start/End: Complemental strand, 23219105 - 23218993
Alignment:
| Q |
126 |
cctagagggtgagacattaagaaagttttttaagagttgtttaggagagaagttctctctggtctaggagcttagctctggtaggagttctctgaactct |
225 |
Q |
| |
|
||||||| |||| |||| ||||||||| | | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23219105 |
cctagagaatgaggcattcagaaagtttgtcatgagttgtttaggagagaagttctctctgatctaggagcttagctctggtaggagttctctgaactct |
23219006 |
T |
 |
| Q |
226 |
ggtttatcctttc |
238 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
23219005 |
ggtttatcatttc |
23218993 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 44672821 - 44672756
Alignment:
| Q |
179 |
tctctctggtctaggagcttagctctgg-taggagttctctgaactctggtttatc-ctttcattt |
242 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
44672821 |
tctctctggtctaggagcatagctctggttaggagttcatagaactctggtttatctctttcattt |
44672756 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 28914472 - 28914400
Alignment:
| Q |
102 |
tttcagttatataagagtgggaagcctagagggtgagacattaagaaagttttttaagagttgtttaggagag |
174 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||| ||||| ||| |||||| ||||||| ||||| |
|
|
| T |
28914472 |
tttcagttatataagagagggaagcctagagggtgattcattcagaaactttattaagaattgtttaagagag |
28914400 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0692 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0692
Description:
Target: scaffold0692; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 5053 - 5006
Alignment:
| Q |
166 |
ttaggagagaagttctctctggtctaggagcttagctctggtaggagt |
213 |
Q |
| |
|
|||| ||||| ||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
5053 |
ttagcagagatgttctctctagtctaggagcctagctctggtaggagt |
5006 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 233
Target Start/End: Original strand, 43575459 - 43575487
Alignment:
| Q |
205 |
ggtaggagttctctgaactctggtttatc |
233 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
43575459 |
ggtaggagttctctgaactctggtttatc |
43575487 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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