View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_high_81 (Length: 247)
Name: NF19097_high_81
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_81 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 32102076 - 32102317
Alignment:
| Q |
1 |
caaacttgagctatatatattactctactttactcaaaaattaactttacttatctctaggacatttgaatt-------------atctagttaaaactc |
87 |
Q |
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| T |
32102076 |
caaacttgagctatatatattactctactttactcaaaaattaactttacttatctctaggacatttgaatttgttatttaaattatctagttaaaactc |
32102175 |
T |
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| Q |
88 |
atatatattatatgacttttgattggtcgattgtgcaaacattttttccactcaaaatgtaacaaaattaaactcataatatgaggttgaatatgaaatt |
187 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32102176 |
atatatattatatgacttttgattggtcgattgtgcaaacattttttccactcaaaatgtaacaaaattaaactcataatatgaggttgaatatgaaatt |
32102275 |
T |
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| Q |
188 |
agtgagaaaatcaattagtataaatagtttttacacacccaat |
230 |
Q |
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||||||||||||||||||||| |||||||||||||||| |||| |
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| T |
32102276 |
agtgagaaaatcaattagtat-aatagtttttacacactcaat |
32102317 |
T |
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