View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_high_82 (Length: 246)
Name: NF19097_high_82
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_high_82 |
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Alignment Details
Target: chr1 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 32101858 - 32101667
Alignment:
| Q |
43 |
tcatgcaagctgcaaaaattgaataaacatatatactagctagtacgaattatgctaagttaggttttgaaatatctttcctttaacacnnnnnnntaaa |
142 |
Q |
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| T |
32101858 |
tcatgcaagctgcaaaaattgaataaacatatatactagctagtacgaattatgctaagttaggttttgaaatatctttcctttaacacaaaaaaataaa |
32101759 |
T |
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| Q |
143 |
ttttgtgataaaagaggtattgctaaaagttatcatatgaagtagcagtatacatattatcaatgcagtttttcccccggttagatatgcat |
234 |
Q |
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| T |
32101758 |
ttttgtgataaaagaggtattgctaaaagttatcatatgaagtagcagtatacatattatcaatgcagtttttcccccggttagatatgcat |
32101667 |
T |
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