View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_low_59 (Length: 264)
Name: NF19097_low_59
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_low_59 |
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Alignment Details
Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 34680250 - 34680500
Alignment:
| Q |
8 |
tgagatgaagagagcctcaagtgaattccacccaaaatgattctttctgtctagtttcaatactatgcaaaacgaggaaagcattatatagtcagcacaa |
107 |
Q |
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| T |
34680250 |
tgagaagaagagagcctcaagtgaattccacccaaaatgattctttctgtctagtttcaatactatgcaaaacgagaaaagcattatatagtcagcacaa |
34680349 |
T |
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| Q |
108 |
tccaatttgggtaagaaaatttatgtttatttttatttacaatgttagaaaattatgtgc----------atagtttgtaaaaataagttatgttaaatt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
34680350 |
tccaatttgggtaagaaaatttatgtttatttttatttacaatgttagaaaattatgtgcatttcgatatatagtttgtaaaaataagttatgttaaatt |
34680449 |
T |
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| Q |
198 |
ttaccaattttacgatcagccaatgatccactacttaactatacaactttt |
248 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34680450 |
ttaccaattttacgatcagccaatgatccactacttaactatacaactttt |
34680500 |
T |
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