View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_low_63 (Length: 258)
Name: NF19097_low_63
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 55981603 - 55981822
Alignment:
| Q |
24 |
taatttttaatatactcaaaataaggtagtagtactgaatgttacaaattgataatcaaatacaaagtaatttttcacgtttcctaaatctatgagcatc |
123 |
Q |
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| T |
55981603 |
taatttttaatatactcaaaataaggtagtagtactgaatgttacaaattgataatcaaatacaaagtaatttttcacgtttcctaaatctatgagcatc |
55981702 |
T |
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| Q |
124 |
taaaattcaacctggatttccttttaaattaatctcagcttacatgtttaaggaaaagaaatctaattagactgccatggacatataaatcatactttgc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
55981703 |
taaaattcaacctggatttccttttaaattaatctcagcttacatgtttaaggaaaagaaatctaattagactgccatggacatataaatcatactttgc |
55981802 |
T |
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| Q |
224 |
caacaaactccacatcgaat |
243 |
Q |
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|||||||||||||||||||| |
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| T |
55981803 |
caacaaactccacatcgaat |
55981822 |
T |
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