View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_low_64 (Length: 256)
Name: NF19097_low_64
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_low_64 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 19 - 256
Target Start/End: Original strand, 2452736 - 2452973
Alignment:
| Q |
19 |
ccatgagcattacccaagaaagtcaaataacaaacaatcgtaaactctaaaatatgaaactttacgtgttcaattagacatgtaaacaatgtacttgttg |
118 |
Q |
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| T |
2452736 |
ccatgagcattacccaagaaagtcaaataaccaacaatcgtaaactctaaaatatgaaactttacgtgttcaattagacatgtaaacaatgtacttgttg |
2452835 |
T |
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| Q |
119 |
tttttgtttcaacttgaataggataatctacagaatgaggctctaaaaggtacttaggcccatattgtacactcatatatgttaattaagtagcacttgt |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2452836 |
tttttgtttcaacttgaataggataatctacagaatgaggcactaaaaggtacttaggctcatattgtacactcatatatgttaattaagtagcacttgt |
2452935 |
T |
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| Q |
219 |
ggcacattctaagagtagtggaccttcttatgggtgcc |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
2452936 |
ggcacattctaagagtagtggaccttcttatgggtgcc |
2452973 |
T |
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