View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_low_71 (Length: 252)
Name: NF19097_low_71
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_low_71 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 2643795 - 2644001
Alignment:
| Q |
27 |
tacctgcaagccaaaatccagtagaaaacatataagggcacagtgataaacaccacagcctgaaatacaaatgcatattttcttatgaattctatgattc |
126 |
Q |
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| T |
2643795 |
tacctgcaagccaaaatccagtagaaaacatacaagggcacagtaataaacaccacagcctgaaatacaaatgcatattttcttattaattctatgattc |
2643894 |
T |
|
| Q |
127 |
aagaataactaattaaacactaataactagaaactttcattagattaagttaaattaatatgcatcccttacaagatacataatgcgagaacacatatcc |
226 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2643895 |
aagaataactaattaaacaccaataactagaaactttcattagattaagttaaattaatatgcatcccttacaagatacataatgcgagaacacatatcc |
2643994 |
T |
|
| Q |
227 |
tccttgg |
233 |
Q |
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||||||| |
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| T |
2643995 |
tccttgg |
2644001 |
T |
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