View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19097_low_80 (Length: 247)
Name: NF19097_low_80
Description: NF19097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19097_low_80 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 19 - 247
Target Start/End: Original strand, 41811803 - 41812032
Alignment:
| Q |
19 |
tgaagtgaattgaaaattcagtaagccaacagaaacaacaaatgacattttcagaatatctaacttcaattgtgaggaaaatcatgatttctctacattt |
118 |
Q |
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| T |
41811803 |
tgaagtgaattgaaaattcagtaagccaacagaaacaacaaatgacattttcagaatatctaacttcaattgtgaggaaaatcatgatttctctacattt |
41811902 |
T |
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| Q |
119 |
tcaatttttcaagcactaagttccatcagtaaatctcacaaggatagaaacaaa-cagaactagtatttggaggaagtgatgagaaatcataccaatgat |
217 |
Q |
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| T |
41811903 |
tcaatttttcaagcactaagttccatcagtaaatctcacaaggatagaaacaaagcagagctagtatttggaggaagtgatgagaaatcataccaatgat |
41812002 |
T |
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| Q |
218 |
gaggtaaaattacagtgctaaactttgatt |
247 |
Q |
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| T |
41812003 |
gaggtaaaattacagtgctaaactttgatt |
41812032 |
T |
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