View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19099_high_28 (Length: 289)

Name: NF19099_high_28
Description: NF19099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19099_high_28
NF19099_high_28
[»] chr7 (62 HSPs)
chr7 (102-242)||(39979623-39979763)
chr7 (102-243)||(40847433-40847574)
chr7 (102-224)||(36636506-36636628)
chr7 (102-231)||(23232039-23232168)
chr7 (116-242)||(4514779-4514905)
chr7 (116-242)||(1824199-1824325)
chr7 (102-231)||(22486394-22486523)
chr7 (116-232)||(26577279-26577395)
chr7 (102-241)||(31425511-31425650)
chr7 (102-225)||(47523666-47523789)
chr7 (102-244)||(15014402-15014544)
chr7 (102-241)||(1907355-1907494)
chr7 (110-241)||(36993828-36993959)
chr7 (102-232)||(24140450-24140580)
chr7 (102-231)||(21917344-21917473)
chr7 (102-231)||(27806018-27806147)
chr7 (102-231)||(28800878-28801007)
chr7 (102-232)||(20174020-20174150)
chr7 (102-231)||(7733322-7733451)
chr7 (102-231)||(18217829-18217958)
chr7 (102-231)||(23577199-23577328)
chr7 (102-231)||(24605838-24605967)
chr7 (102-231)||(37135295-37135424)
chr7 (107-231)||(1842899-1843023)
chr7 (102-232)||(2457670-2457798)
chr7 (102-231)||(816201-816330)
chr7 (102-231)||(11036507-11036636)
chr7 (102-242)||(48933136-48933276)
chr7 (102-231)||(6849221-6849350)
chr7 (102-231)||(23750746-23750875)
chr7 (115-231)||(11852021-11852137)
chr7 (108-244)||(14786632-14786768)
chr7 (107-231)||(38057637-38057761)
chr7 (116-231)||(3872197-3872312)
chr7 (116-231)||(3904488-3904603)
chr7 (102-231)||(9698548-9698677)
chr7 (102-211)||(10050866-10050975)
chr7 (102-231)||(20429465-20429594)
chr7 (112-231)||(21623031-21623149)
chr7 (116-231)||(33427704-33427818)
chr7 (110-231)||(20923968-20924089)
chr7 (102-227)||(22501594-22501719)
chr7 (118-231)||(23539248-23539361)
chr7 (102-231)||(23699835-23699964)
chr7 (108-232)||(27304878-27305000)
chr7 (102-225)||(42926435-42926559)
chr7 (102-225)||(31042251-31042374)
chr7 (114-231)||(15969796-15969914)
chr7 (102-211)||(11890177-11890286)
chr7 (102-199)||(45664768-45664865)
chr7 (107-227)||(32267352-32267471)
chr7 (124-231)||(2650838-2650945)
chr7 (145-231)||(21871611-21871697)
chr7 (102-231)||(26415424-26415553)
chr7 (116-241)||(1821996-1822118)
chr7 (116-231)||(2093372-2093487)
chr7 (112-223)||(10222648-10222758)
chr7 (175-241)||(38090336-38090402)
chr7 (107-231)||(27130339-27130461)
chr7 (107-225)||(25777128-25777246)
chr7 (134-232)||(1841792-1841889)
chr7 (145-231)||(27132731-27132817)
[»] chr4 (61 HSPs)
chr4 (102-246)||(33914057-33914201)
chr4 (102-235)||(25147719-25147852)
chr4 (102-241)||(5399607-5399746)
chr4 (119-241)||(9058952-9059074)
chr4 (102-231)||(22168266-22168395)
chr4 (102-241)||(1638445-1638584)
chr4 (102-231)||(32175747-32175876)
chr4 (102-225)||(2275694-2275817)
chr4 (102-231)||(55309222-55309352)
chr4 (110-231)||(8878889-8879010)
chr4 (102-243)||(12071960-12072101)
chr4 (102-231)||(19839177-19839306)
chr4 (102-231)||(22128322-22128451)
chr4 (102-231)||(27040035-27040164)
chr4 (102-231)||(37378633-37378762)
chr4 (102-231)||(46286239-46286368)
chr4 (116-231)||(38619859-38619974)
chr4 (102-231)||(5473847-5473976)
chr4 (102-231)||(36689675-36689804)
chr4 (107-231)||(44783485-44783610)
chr4 (102-242)||(45532578-45532718)
chr4 (112-231)||(4586768-4586887)
chr4 (116-231)||(38645762-38645877)
chr4 (116-241)||(12105995-12106119)
chr4 (102-231)||(18051837-18051966)
chr4 (116-231)||(7111956-7112071)
chr4 (116-231)||(9670489-9670604)
chr4 (116-231)||(29625337-29625452)
chr4 (116-231)||(30507999-30508114)
chr4 (112-242)||(25026565-25026695)
chr4 (107-225)||(38223513-38223631)
chr4 (102-231)||(13564925-13565054)
chr4 (102-231)||(30268998-30269127)
chr4 (102-231)||(30283062-30283191)
chr4 (145-241)||(9238625-9238721)
chr4 (107-231)||(19680434-19680558)
chr4 (102-190)||(22156652-22156740)
chr4 (112-231)||(13028826-13028945)
chr4 (112-231)||(18714910-18715029)
chr4 (124-231)||(24682337-24682444)
chr4 (102-231)||(39234940-39235068)
chr4 (112-231)||(54539294-54539413)
chr4 (107-225)||(9913261-9913379)
chr4 (110-232)||(29238429-29238551)
chr4 (145-231)||(42055438-42055524)
chr4 (116-225)||(9239297-9239406)
chr4 (110-231)||(16915375-16915496)
chr4 (110-231)||(30568009-30568130)
chr4 (128-211)||(313611-313694)
chr4 (116-242)||(4606828-4606954)
chr4 (107-171)||(37761912-37761976)
chr4 (112-231)||(4627088-4627207)
chr4 (116-211)||(6553816-6553911)
chr4 (116-211)||(14944758-14944853)
chr4 (125-231)||(30420043-30420149)
chr4 (102-211)||(18744100-18744209)
chr4 (126-241)||(3613017-3613133)
chr4 (145-225)||(34557224-34557304)
chr4 (111-231)||(25225106-25225224)
chr4 (112-168)||(45091282-45091338)
chr4 (127-198)||(23104371-23104442)
[»] chr3 (89 HSPs)
chr3 (102-242)||(30219334-30219474)
chr3 (107-241)||(19610339-19610473)
chr3 (102-241)||(16299857-16299996)
chr3 (102-241)||(29215988-29216127)
chr3 (116-242)||(15063991-15064117)
chr3 (116-241)||(50665636-50665761)
chr3 (102-242)||(25882566-25882706)
chr3 (102-231)||(27449084-27449213)
chr3 (102-242)||(19269863-19270003)
chr3 (102-241)||(18091547-18091686)
chr3 (102-241)||(49915447-49915586)
chr3 (116-241)||(5744426-5744551)
chr3 (116-241)||(5781385-5781510)
chr3 (102-231)||(11915754-11915883)
chr3 (132-241)||(37283549-37283658)
chr3 (102-231)||(5260933-5261062)
chr3 (102-231)||(18104540-18104669)
chr3 (112-247)||(13921331-13921466)
chr3 (116-231)||(26098823-26098938)
chr3 (112-231)||(48404866-48404985)
chr3 (102-231)||(18539800-18539929)
chr3 (102-231)||(19223445-19223574)
chr3 (102-226)||(17762638-17762762)
chr3 (102-226)||(19063958-19064082)
chr3 (112-243)||(21088758-21088887)
chr3 (102-225)||(8428167-8428290)
chr3 (102-241)||(21020061-21020200)
chr3 (102-231)||(1628211-1628340)
chr3 (102-231)||(8110335-8110464)
chr3 (114-231)||(10941675-10941792)
chr3 (102-231)||(11007693-11007822)
chr3 (102-231)||(26390644-26390773)
chr3 (102-231)||(29704042-29704171)
chr3 (102-231)||(36543745-36543874)
chr3 (107-231)||(1310969-1311093)
chr3 (107-231)||(11837224-11837348)
chr3 (107-231)||(29956373-29956497)
chr3 (107-231)||(30005528-30005652)
chr3 (112-231)||(21816727-21816846)
chr3 (107-241)||(23217208-23217342)
chr3 (116-241)||(1745488-1745612)
chr3 (102-231)||(4393360-4393489)
chr3 (102-231)||(7623541-7623670)
chr3 (102-231)||(9652574-9652703)
chr3 (102-231)||(11085352-11085481)
chr3 (102-211)||(17582331-17582440)
chr3 (102-231)||(28389969-28390098)
chr3 (112-241)||(29236050-29236179)
chr3 (102-241)||(26830441-26830581)
chr3 (116-231)||(13905048-13905163)
chr3 (102-211)||(19545506-19545615)
chr3 (102-231)||(36564449-36564578)
chr3 (107-227)||(31250089-31250209)
chr3 (116-231)||(5565732-5565847)
chr3 (116-231)||(17269614-17269729)
chr3 (116-231)||(23773487-23773602)
chr3 (116-231)||(43329773-43329888)
chr3 (116-231)||(46012738-46012853)
chr3 (102-231)||(10803716-10803846)
chr3 (126-231)||(8546265-8546370)
chr3 (102-231)||(11219134-11219263)
chr3 (102-199)||(27212823-27212920)
chr3 (110-231)||(27968919-27969040)
chr3 (112-225)||(28859597-28859710)
chr3 (116-231)||(3461320-3461435)
chr3 (102-241)||(15490031-15490169)
chr3 (111-198)||(20088405-20088492)
chr3 (145-242)||(6447245-6447342)
chr3 (146-231)||(20761960-20762045)
chr3 (111-243)||(27182656-27182786)
chr3 (119-211)||(6718723-6718815)
chr3 (102-242)||(20615344-20615482)
chr3 (33-81)||(22921928-22921976)
chr3 (107-231)||(46942488-46942612)
chr3 (102-241)||(8543465-8543603)
chr3 (102-241)||(31433733-31433872)
chr3 (102-231)||(18380020-18380149)
chr3 (102-231)||(29451090-29451219)
chr3 (116-231)||(6088238-6088353)
chr3 (116-231)||(21490044-21490159)
chr3 (112-231)||(47263275-47263394)
chr3 (112-189)||(10772106-10772183)
chr3 (116-211)||(50240756-50240851)
chr3 (116-190)||(23233214-23233288)
chr3 (112-230)||(45304340-45304458)
chr3 (124-173)||(27711236-27711285)
chr3 (107-231)||(26963259-26963383)
chr3 (206-243)||(23233182-23233219)
chr3 (112-161)||(35579605-35579654)
[»] scaffold0058 (1 HSPs)
scaffold0058 (102-244)||(74538-74680)
[»] chr8 (63 HSPs)
chr8 (102-231)||(17824626-17824755)
chr8 (102-231)||(17103875-17104004)
chr8 (102-244)||(18844541-18844683)
chr8 (102-231)||(8555314-8555443)
chr8 (102-242)||(3823131-3823271)
chr8 (114-246)||(27869248-27869380)
chr8 (116-231)||(10917839-10917954)
chr8 (102-232)||(37992097-37992227)
chr8 (102-231)||(24576034-24576163)
chr8 (102-231)||(33652565-33652694)
chr8 (102-231)||(4330976-4331105)
chr8 (102-231)||(17810296-17810425)
chr8 (102-231)||(18010070-18010199)
chr8 (102-231)||(19240865-19240994)
chr8 (102-231)||(19314049-19314178)
chr8 (102-231)||(27910774-27910903)
chr8 (102-231)||(27957193-27957322)
chr8 (145-241)||(8789881-8789977)
chr8 (112-231)||(11938753-11938871)
chr8 (112-231)||(19256220-19256339)
chr8 (116-231)||(19488071-19488186)
chr8 (116-231)||(32247921-32248036)
chr8 (114-231)||(22939323-22939440)
chr8 (102-231)||(24193206-24193335)
chr8 (102-231)||(43431569-43431698)
chr8 (102-241)||(6816383-6816522)
chr8 (116-231)||(13060941-13061056)
chr8 (112-231)||(30466964-30467083)
chr8 (112-231)||(30687944-30688063)
chr8 (102-231)||(21350476-21350605)
chr8 (116-220)||(26399028-26399132)
chr8 (102-231)||(29350921-29351051)
chr8 (102-231)||(16061949-16062078)
chr8 (112-216)||(5670194-5670298)
chr8 (112-228)||(24636660-24636776)
chr8 (119-231)||(25655868-25655980)
chr8 (102-242)||(32961657-32961797)
chr8 (116-243)||(23752284-23752411)
chr8 (102-231)||(9631401-9631531)
chr8 (102-231)||(4647765-4647894)
chr8 (102-231)||(9915051-9915179)
chr8 (107-231)||(29345074-29345198)
chr8 (112-231)||(25000441-25000560)
chr8 (116-231)||(25273338-25273452)
chr8 (102-225)||(40289437-40289559)
chr8 (116-201)||(19493695-19493781)
chr8 (102-231)||(6817052-6817181)
chr8 (134-231)||(8824855-8824952)
chr8 (110-231)||(15251608-15251728)
chr8 (123-231)||(21219250-21219358)
chr8 (102-201)||(5879202-5879301)
chr8 (102-241)||(31344172-31344311)
chr8 (116-231)||(31399518-31399633)
chr8 (152-245)||(17003310-17003403)
chr8 (161-231)||(25274654-25274724)
chr8 (116-225)||(33412992-33413095)
chr8 (145-232)||(2265388-2265474)
chr8 (145-231)||(6084256-6084340)
chr8 (116-211)||(41527730-41527825)
chr8 (155-231)||(42700667-42700743)
chr8 (102-198)||(3692214-3692310)
chr8 (145-193)||(15289683-15289731)
chr8 (145-193)||(15470052-15470100)
[»] chr6 (76 HSPs)
chr6 (102-242)||(22083838-22083978)
chr6 (102-241)||(12951708-12951847)
chr6 (102-241)||(18033526-18033664)
chr6 (102-243)||(11530225-11530366)
chr6 (102-247)||(28364911-28365056)
chr6 (116-231)||(11077663-11077778)
chr6 (102-231)||(9892963-9893092)
chr6 (102-242)||(22579348-22579488)
chr6 (102-241)||(2992615-2992754)
chr6 (116-232)||(14872133-14872249)
chr6 (102-243)||(6978279-6978418)
chr6 (102-231)||(6598464-6598593)
chr6 (102-231)||(15364468-15364597)
chr6 (102-231)||(24661019-24661148)
chr6 (102-231)||(25398002-25398131)
chr6 (102-231)||(26224428-26224557)
chr6 (102-231)||(495637-495766)
chr6 (102-231)||(12200694-12200823)
chr6 (102-223)||(12845003-12845124)
chr6 (102-231)||(14886561-14886690)
chr6 (131-241)||(14772690-14772800)
chr6 (102-231)||(1939252-1939381)
chr6 (114-231)||(11049761-11049878)
chr6 (102-231)||(27796844-27796973)
chr6 (124-231)||(5360431-5360538)
chr6 (102-241)||(18048788-18048927)
chr6 (102-217)||(23281786-23281901)
chr6 (102-231)||(21140939-21141068)
chr6 (114-226)||(33250723-33250835)
chr6 (116-231)||(5192199-5192314)
chr6 (116-231)||(6605506-6605621)
chr6 (112-231)||(9885253-9885372)
chr6 (112-231)||(15448395-15448514)
chr6 (102-231)||(2669309-2669438)
chr6 (102-223)||(12351604-12351725)
chr6 (102-231)||(20182145-20182274)
chr6 (102-231)||(21990185-21990313)
chr6 (102-231)||(22153717-22153846)
chr6 (114-231)||(26939599-26939716)
chr6 (110-231)||(30833970-30834091)
chr6 (116-232)||(1954895-1955010)
chr6 (116-244)||(6065451-6065579)
chr6 (116-231)||(12499230-12499345)
chr6 (116-231)||(12506559-12506674)
chr6 (116-231)||(12509556-12509671)
chr6 (102-201)||(27705422-27705521)
chr6 (102-232)||(22055621-22055751)
chr6 (134-231)||(28668132-28668229)
chr6 (116-201)||(33547560-33547645)
chr6 (102-241)||(21691495-21691635)
chr6 (116-232)||(11350196-11350309)
chr6 (110-231)||(9060099-9060219)
chr6 (114-231)||(12160857-12160973)
chr6 (102-231)||(16250812-16250941)
chr6 (102-231)||(18492369-18492498)
chr6 (116-200)||(13145016-13145100)
chr6 (132-231)||(15509186-15509285)
chr6 (116-231)||(20692821-20692936)
chr6 (145-231)||(12157386-12157472)
chr6 (102-211)||(343593-343702)
chr6 (102-231)||(12680195-12680323)
chr6 (134-231)||(17919568-17919665)
chr6 (124-231)||(12205195-12205302)
chr6 (116-231)||(15961417-15961532)
chr6 (145-231)||(10458807-10458893)
chr6 (102-190)||(14036620-14036708)
chr6 (102-190)||(19175828-19175915)
chr6 (102-242)||(11431638-11431779)
chr6 (112-243)||(16118156-16118287)
chr6 (157-240)||(28221647-28221730)
chr6 (158-231)||(5250195-5250268)
chr6 (124-232)||(10929505-10929614)
chr6 (102-211)||(5270392-5270502)
chr6 (145-190)||(3673184-3673229)
chr6 (148-211)||(2396249-2396313)
chr6 (159-231)||(9878525-9878596)
[»] scaffold0047 (1 HSPs)
scaffold0047 (102-241)||(58582-58721)
[»] chr2 (51 HSPs)
chr2 (102-241)||(30783334-30783473)
chr2 (102-231)||(41637614-41637743)
chr2 (107-242)||(27327617-27327752)
chr2 (102-241)||(31266350-31266489)
chr2 (102-231)||(29749413-29749542)
chr2 (102-242)||(28841341-28841481)
chr2 (102-231)||(32300447-32300576)
chr2 (107-231)||(28319589-28319713)
chr2 (102-231)||(22140374-22140503)
chr2 (102-241)||(18551253-18551392)
chr2 (112-231)||(37552233-37552352)
chr2 (102-231)||(1141532-1141661)
chr2 (102-231)||(15636745-15636874)
chr2 (102-235)||(18916407-18916539)
chr2 (102-231)||(37724002-37724131)
chr2 (112-231)||(12779606-12779725)
chr2 (108-231)||(13613103-13613226)
chr2 (116-231)||(43408521-43408636)
chr2 (116-231)||(44476385-44476500)
chr2 (102-244)||(13788052-13788194)
chr2 (102-231)||(32008948-32009078)
chr2 (102-231)||(8430292-8430421)
chr2 (102-231)||(20065084-20065213)
chr2 (102-231)||(23388388-23388517)
chr2 (102-230)||(26687701-26687830)
chr2 (102-231)||(41736168-41736297)
chr2 (116-231)||(7093578-7093693)
chr2 (114-244)||(36550844-36550973)
chr2 (114-231)||(14757131-14757248)
chr2 (102-231)||(21293721-21293850)
chr2 (102-231)||(32185828-32185957)
chr2 (107-231)||(44722933-44723057)
chr2 (112-231)||(23857968-23858086)
chr2 (102-181)||(27523007-27523086)
chr2 (126-224)||(35697475-35697573)
chr2 (102-232)||(44366006-44366136)
chr2 (146-231)||(27039918-27040003)
chr2 (102-231)||(28262360-28262489)
chr2 (116-231)||(26243331-26243446)
chr2 (124-231)||(38362281-38362388)
chr2 (102-241)||(37802379-37802517)
chr2 (112-229)||(8763640-8763757)
chr2 (109-242)||(18609517-18609650)
chr2 (112-215)||(40018808-40018911)
chr2 (112-215)||(13134646-13134749)
chr2 (145-242)||(2556134-2556231)
chr2 (102-167)||(29998633-29998698)
chr2 (118-211)||(31966555-31966647)
chr2 (102-242)||(36373896-36374034)
chr2 (102-190)||(9004359-9004447)
chr2 (159-231)||(22192232-22192304)
[»] chr5 (53 HSPs)
chr5 (102-231)||(33818571-33818700)
chr5 (116-242)||(25397787-25397913)
chr5 (102-242)||(23423755-23423895)
chr5 (102-242)||(618294-618434)
chr5 (102-231)||(16121849-16121978)
chr5 (102-213)||(33816786-33816897)
chr5 (102-241)||(27428012-27428151)
chr5 (107-242)||(35620343-35620477)
chr5 (102-231)||(17039641-17039770)
chr5 (107-231)||(2472724-2472848)
chr5 (116-231)||(746878-746993)
chr5 (102-231)||(8886861-8886990)
chr5 (102-231)||(23975635-23975764)
chr5 (102-242)||(25673228-25673367)
chr5 (102-231)||(8108870-8108999)
chr5 (102-231)||(12045727-12045856)
chr5 (102-231)||(12328236-12328365)
chr5 (102-231)||(36196394-36196523)
chr5 (116-231)||(16631884-16631999)
chr5 (112-227)||(26708599-26708714)
chr5 (112-227)||(26978333-26978448)
chr5 (116-231)||(38837681-38837796)
chr5 (126-232)||(33734982-33735088)
chr5 (102-231)||(7888797-7888926)
chr5 (110-231)||(13620137-13620258)
chr5 (102-231)||(15060973-15061102)
chr5 (102-231)||(36831900-36832029)
chr5 (116-231)||(10494751-10494866)
chr5 (112-243)||(24138839-24138970)
chr5 (116-231)||(36597350-36597465)
chr5 (107-241)||(25652583-25652717)
chr5 (102-231)||(17986729-17986858)
chr5 (102-231)||(20959508-20959637)
chr5 (107-231)||(28265485-28265609)
chr5 (102-241)||(11927786-11927925)
chr5 (116-231)||(17771978-17772093)
chr5 (116-231)||(40484058-40484173)
chr5 (102-231)||(7003740-7003867)
chr5 (102-244)||(10420249-10420391)
chr5 (102-231)||(23408980-23409110)
chr5 (112-237)||(3080700-3080825)
chr5 (107-231)||(5982650-5982775)
chr5 (107-244)||(17036409-17036546)
chr5 (116-231)||(4125198-4125313)
chr5 (112-241)||(20187941-20188070)
chr5 (110-235)||(32726732-32726857)
chr5 (102-201)||(17079405-17079504)
chr5 (116-231)||(35778155-35778270)
chr5 (102-231)||(13974088-13974217)
chr5 (126-198)||(31853131-31853203)
chr5 (145-231)||(16472191-16472277)
chr5 (155-211)||(9024267-9024323)
chr5 (102-169)||(18413556-18413623)
[»] chr1 (75 HSPs)
chr1 (112-231)||(50845340-50845459)
chr1 (102-231)||(14760867-14760996)
chr1 (102-241)||(13102316-13102455)
chr1 (102-231)||(12720809-12720938)
chr1 (102-241)||(7830031-7830170)
chr1 (102-231)||(6459217-6459346)
chr1 (102-231)||(9109985-9110114)
chr1 (102-231)||(45839292-45839421)
chr1 (102-244)||(18894897-18895039)
chr1 (102-231)||(6412063-6412192)
chr1 (102-231)||(41752433-41752562)
chr1 (116-231)||(46790014-46790129)
chr1 (112-242)||(4340417-4340547)
chr1 (102-232)||(16913586-16913716)
chr1 (102-216)||(41071860-41071974)
chr1 (102-231)||(9464103-9464232)
chr1 (102-231)||(15243085-15243214)
chr1 (102-231)||(20408170-20408299)
chr1 (102-231)||(22603548-22603677)
chr1 (102-231)||(29549418-29549547)
chr1 (102-231)||(38531180-38531309)
chr1 (102-231)||(52183678-52183807)
chr1 (107-231)||(46339455-46339579)
chr1 (116-247)||(13308814-13308945)
chr1 (116-231)||(19865258-19865373)
chr1 (102-225)||(22789607-22789730)
chr1 (116-231)||(28229465-28229580)
chr1 (112-231)||(41120747-41120866)
chr1 (102-231)||(22158802-22158931)
chr1 (102-231)||(48522518-48522647)
chr1 (107-231)||(51973429-51973553)
chr1 (102-241)||(17661050-17661189)
chr1 (102-241)||(19081728-19081867)
chr1 (102-241)||(19129616-19129755)
chr1 (112-231)||(46785968-46786087)
chr1 (102-231)||(9985337-9985466)
chr1 (102-231)||(12161814-12161943)
chr1 (102-231)||(17200020-17200149)
chr1 (102-231)||(18890559-18890688)
chr1 (102-231)||(23457897-23458026)
chr1 (107-199)||(12174808-12174900)
chr1 (111-231)||(50092308-50092428)
chr1 (102-241)||(12989852-12989991)
chr1 (102-244)||(7181552-7181694)
chr1 (102-200)||(13523002-13523100)
chr1 (133-231)||(25788007-25788105)
chr1 (102-231)||(41063197-41063326)
chr1 (112-231)||(9177110-9177229)
chr1 (115-242)||(11917799-11917925)
chr1 (102-232)||(30928387-30928517)
chr1 (116-201)||(41359001-41359087)
chr1 (102-231)||(9259193-9259322)
chr1 (102-179)||(12370003-12370080)
chr1 (112-241)||(39748943-39749072)
chr1 (102-231)||(46865243-46865372)
chr1 (126-241)||(12806836-12806952)
chr1 (116-231)||(8941004-8941119)
chr1 (102-232)||(17733962-17734093)
chr1 (145-231)||(27253865-27253951)
chr1 (102-211)||(32046876-32046985)
chr1 (152-231)||(18787923-18788001)
chr1 (108-231)||(26825246-26825369)
chr1 (102-232)||(16258495-16258625)
chr1 (107-227)||(13195588-13195708)
chr1 (102-231)||(20290331-20290459)
chr1 (116-241)||(49881058-49881182)
chr1 (111-231)||(6775896-6776015)
chr1 (102-241)||(20580909-20581049)
chr1 (117-232)||(45918913-45919028)
chr1 (102-175)||(14486698-14486771)
chr1 (111-166)||(25687355-25687410)
chr1 (102-200)||(52621154-52621252)
chr1 (116-211)||(9882070-9882162)
chr1 (102-199)||(29093596-29093693)
chr1 (112-193)||(30673504-30673585)
[»] scaffold0069 (1 HSPs)
scaffold0069 (102-232)||(10158-10288)
[»] scaffold0717 (1 HSPs)
scaffold0717 (102-231)||(928-1058)
[»] scaffold0599 (1 HSPs)
scaffold0599 (102-231)||(7505-7634)
[»] scaffold0219 (1 HSPs)
scaffold0219 (102-231)||(19603-19732)
[»] scaffold0576 (1 HSPs)
scaffold0576 (102-231)||(9239-9368)
[»] scaffold0108 (1 HSPs)
scaffold0108 (102-231)||(12653-12781)
[»] scaffold0076 (1 HSPs)
scaffold0076 (102-231)||(26483-26612)
[»] scaffold0001 (3 HSPs)
scaffold0001 (102-231)||(8120-8249)
scaffold0001 (102-231)||(21852-21981)
scaffold0001 (102-231)||(84303-84432)
[»] scaffold0007 (3 HSPs)
scaffold0007 (107-231)||(3747-3871)
scaffold0007 (102-231)||(202774-202903)
scaffold0007 (102-168)||(276207-276273)
[»] scaffold0502 (1 HSPs)
scaffold0502 (102-241)||(10892-11031)
[»] scaffold0603 (1 HSPs)
scaffold0603 (102-231)||(5989-6118)
[»] scaffold0087 (1 HSPs)
scaffold0087 (102-231)||(37797-37926)
[»] scaffold0240 (1 HSPs)
scaffold0240 (112-231)||(15000-15119)
[»] scaffold0128 (1 HSPs)
scaffold0128 (112-231)||(10673-10792)
[»] scaffold0014 (1 HSPs)
scaffold0014 (112-231)||(22221-22340)
[»] scaffold0009 (3 HSPs)
scaffold0009 (114-231)||(219648-219765)
scaffold0009 (134-231)||(182562-182659)
scaffold0009 (162-241)||(215663-215742)
[»] scaffold0006 (2 HSPs)
scaffold0006 (116-231)||(84684-84799)
scaffold0006 (107-241)||(120987-121121)
[»] scaffold0019 (1 HSPs)
scaffold0019 (114-241)||(173456-173584)
[»] scaffold0655 (1 HSPs)
scaffold0655 (107-231)||(3172-3294)
[»] scaffold0062 (1 HSPs)
scaffold0062 (102-231)||(43917-44046)
[»] scaffold0161 (1 HSPs)
scaffold0161 (108-231)||(6801-6924)
[»] scaffold0035 (1 HSPs)
scaffold0035 (114-227)||(74731-74845)
[»] scaffold0023 (1 HSPs)
scaffold0023 (102-231)||(39713-39842)
[»] scaffold0184 (1 HSPs)
scaffold0184 (107-231)||(7461-7585)
[»] scaffold0284 (1 HSPs)
scaffold0284 (116-211)||(1549-1644)
[»] scaffold0011 (1 HSPs)
scaffold0011 (153-231)||(17627-17705)
[»] scaffold0038 (1 HSPs)
scaffold0038 (157-240)||(22145-22228)
[»] scaffold0002 (1 HSPs)
scaffold0002 (116-231)||(439977-440092)
[»] scaffold0114 (1 HSPs)
scaffold0114 (116-211)||(36316-36411)
[»] scaffold0211 (1 HSPs)
scaffold0211 (116-201)||(19178-19263)


Alignment Details
Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 39979763 - 39979623
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  39979763 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 39979664  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     |||||||||||||||||||||||||||||| |||||||||    
T  39979663 tcacaaatttccctccctaattttgcttttcctaatagtgt 39979623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 243
Target Start/End: Complemental strand, 40847574 - 40847433
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40847574 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccg 40847475  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgta 243  Q
     ||||||||||||||||||||||| |||||| || |||||||    
T  40847474 tcacaaatttccctccctaattttacttttcctagtagtgta 40847433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 102 - 224
Target Start/End: Original strand, 36636506 - 36636628
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  36636506 ttagtgaggcaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 36636605  T
Q  202 acacaaatttccctccctaattt 224  Q
     ||||||||||||||||||||||    
T  36636606 tcacaaatttccctccctaattt 36636628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 23232039 - 23232168
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  23232039 ttagtgagggatatttagtgagggaaaacatgaaatccctttctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 23232138  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  23232139 tcactaatttccctctctaattttgctttt 23232168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 4514779 - 4514905
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||| ||||||||||| | ||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  4514779 ttagtgagggaaaatatgaaatccctctctaattccttcactaaattttgcgaccaaagaatttgtgagaaattttatgttttccgtcacaaatttccct 4514878  T
Q  216 ccctaattttgcttttcttaatagtgt 242  Q
    ||||||||||||||||| || ||||||    
T  4514879 ccctaattttgcttttcctagtagtgt 4514905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 1824325 - 1824199
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  1824325 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccgtcacaaatttccct 1824226  T
Q  216 ccctaattttgcttttcttaatagtgt 242  Q
    ||||||||||||||||| || ||||||    
T  1824225 ccctaattttgcttttcctagtagtgt 1824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 22486394 - 22486523
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  22486394 ttagtgagggaaatttagtgacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 22486493  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  22486494 tcactaatttccctcgctaattttgctttt 22486523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 26577279 - 26577395
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||| |||||||    
T  26577279 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaagtttccct 26577378  T
Q  216 ccctaattttgcttttc 232  Q
     ||||||||||||||||    
T  26577379 tcctaattttgcttttc 26577395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 31425650 - 31425511
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||    
T  31425650 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccacagaatttgtgaggaatttcattttttccg 31425551  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| ||||||||||||||  ||||||||    
T  31425550 tcactaatttccctcgctaattttgctttttctaatagtg 31425511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 47523789 - 47523666
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  47523789 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 47523690  T
Q  202 acacaaatttccctccctaatttt 225  Q
     ||| |||||||||| ||||||||    
T  47523689 tcactaatttccctcgctaatttt 47523666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 15014544 - 15014402
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  15014544 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 15014445  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     ||| |||||||||| |||||||| |||||  || ||||||||    
T  15014444 tcaccaatttccctcgctaattttactttttctagtagtgtaa 15014402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 1907355 - 1907494
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||| |||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||||||    
T  1907355 ttagtgaggaaaatctagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccg 1907454  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| ||||||||||||||| || |||||    
T  1907455 tcactaatttccctcgctaattttgcttttcctagtagtg 1907494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 36993828 - 36993959
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| | ||||||||||||| |||| |||||||||||||||||||| |||| ||  ||||| ||||||||||||| ||||||  |||||||    
T  36993828 ggaaatttagtgaggaaaaacatgaaatctctttctaattccgtcactaaattttacgactaagaaatttgtgaggaattttatattttccatcacaaat 36993927  T
Q  210 ttccctccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||||||||| || |||||    
T  36993928 ttccctccctaattttgcttttcctagtagtg 36993959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 24140450 - 24140580
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||||| |||||| | |  |||||||||| |||||||| |||||||||||||| ||||||||||||| |||||||    
T  24140450 ttagtgagggaaatttagtgagggaaaacataaaatccttctccaattccgtcattaaattttacgaccaaagaatttgtgaggaattttatattttccg 24140549  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||||||||| ||||||||||||| ||||||    
T  24140550 tcacaaattttcctccctaattttacttttc 24140580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 21917473 - 21917344
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  21917473 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21917374  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  21917373 tcactaatttccctcactaattttgctttt 21917344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 27806018 - 27806147
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  27806018 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 27806117  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| ||||||||||||||    
T  27806118 tcactaattttcctcgctaattttgctttt 27806147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 28800878 - 28801007
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||| |    
T  28800878 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttctg 28800977  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  28800978 tcactaatttccctcgctaattttgctttt 28801007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 20174020 - 20174150
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  20174020 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20174119  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| |||||||||| |||||||||||||||    
T  20174120 tcactaatttccctcgctaattttgcttttc 20174150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 7733451 - 7733322
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| | |||||||||||||||| | |||||||||| ||||||||||||||||| |||||| |||||||||| || |||||||    
T  7733451 ttagtgagggatatttagtgaggtaaaacatgaaatccctctctaattccgtctctaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 7733352  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||| ||||||    
T  7733351 tcactaatttccctcgctaatttcgctttt 7733322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18217829 - 18217958
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||| | |||||||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  18217829 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 18217928  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  18217929 tcactaatttccctcgctaattttgctttt 18217958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 23577328 - 23577199
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  23577328 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 23577229  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| || ||||| |||||    
T  23577228 tcactaatttctctcgctgatttttctttt 23577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 24605838 - 24605967
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  24605838 ttagtgaggaaaatttagtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 24605937  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| || ||||| |||||    
T  24605938 tcactaatttccctcgctgatttttctttt 24605967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 37135424 - 37135295
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||  ||||||||||||||||| || |||||||    
T  37135424 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatggaatttatgaggaatttcattttttccg 37135325  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  37135324 tcactaatttccctcactaattttgttttt 37135295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 1842899 - 1843023
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||| | ||||||||   |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  1842899 gagggaaatttagtgagggaaaacgtaaaatccctccctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 1842998  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||||||  |||||||||||||    
T  1842999 aatttccctcgttaattttgctttt 1843023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 2457670 - 2457798
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||| |||| |||||||||||||||||| |  |||||||||||||||||||||||| ||||||||| ||||  ||||||| ||||| |    
T  2457670 ttagtgaggaaaattttgtgagggaaaacatgaaatccctctcaaattccgtcactaaattttgcgacaaaagaatttgtgag--attttatattttctg 2457767  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| ||||||||||||||||||||||||||    
T  2457768 tcactaatttccctccctaattttgcttttc 2457798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 816330 - 816201
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| ||||  ||||| | |||||||    
T  816330 ttagtgaggaaaatttagagatggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagagattttgttttttccg 816231  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||||||| |||| ||||    
T  816230 tcactaatttccctccctaaatttgttttt 816201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 11036507 - 11036636
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  11036507 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 11036606  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  11036607 tcactaatttcccttgctaattttgctttt 11036636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 48933136 - 48933276
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| ||||   ||||| |||||| ||| | |||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||    
T  48933136 ttagtgagggaaattttgtgagaaaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 48933235  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| ||||| |||| ||||||||||||||  |||||||||    
T  48933236 tcactaattttcctcgctaattttgctttttctaatagtgt 48933276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 6849350 - 6849221
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||| | ||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || || ||||    
T  6849350 ttagcgagggaaatttagtgaggtaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttctccg 6849251  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  6849250 tcactaatttccctcgctaattttgctttt 6849221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 23750875 - 23750746
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||  | |||||||| | |||||||||||||||||||| ||||||| |||||| |||| ||||| || |||||||    
T  23750875 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaatttcattttttccg 23750776  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  23750775 tcactaatttccctcgctaattttgttttt 23750746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 11852021 - 11852137
Alignment:
Q  115 tttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccc 214  Q
    ||||| || ||||||| |||||||| | | ||||||||||||||||||||| ||||||||||||| ||||  ||||||| ||||| | |||||||||| |    
T  11852021 tttagagagggaaaacctgaaatccttctctaattccgtcactaaattttgtgaccaaagaatttgtgagacattttattttttctgtcacaaatttctc 11852120  T
Q  215 tccctaattttgctttt 231  Q
    |||||||||||||||||    
T  11852121 tccctaattttgctttt 11852137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 14786768 - 14786632
Alignment:
Q  108 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 207  Q
    |||||||||||  || ||||||| | |||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||||| || ||||| | ||| |    
T  14786768 agggaaatttaacgagggaaaacgtaaaattcctttttaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttctgtcacta 14786669  T
Q  208 atttccctccctaattttgcttttcttaatagtgtaa 244  Q
    |||| |||| ||||||||| ||||  |||||||||||    
T  14786668 attttcctcactaattttgttttttctaatagtgtaa 14786632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 38057637 - 38057761
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||| |||||||||| | |||||||||||||||| ||||||||||| |||||| ||||||||||||| ||||||  |||     
T  38057637 gagggaaatttagcgagggaaaacgtgaaatccctctttaattccgtcactaaactttgcgaccaaggaatttgtgaggaattttattttttccatcact 38057736  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| ||||  | |||||||||||    
T  38057737 aattttcctcgttgattttgctttt 38057761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 3872312 - 3872197
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | ||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  3872312 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 3872213  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  3872212 cgctaattttgctttt 3872197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 3904603 - 3904488
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||  ||||||||| || ||||||| ||| |||||||||    
T  3904603 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgcgaggaatttcattttttccgtcactaatttccct 3904504  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  3904503 cgctaattttgctttt 3904488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9698677 - 9698548
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||  |||||| |||||| ||| |||||| ||  ||||||    
T  9698677 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 9698578  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  9698577 tcactaatttccctcgctaattttgctttt 9698548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 10050975 - 10050866
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  10050975 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccg 10050876  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  10050875 tcactaattt 10050866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 20429465 - 20429594
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||   ||||| |||||||||| || |||||||    
T  20429465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgtgaggaatttcattttttccg 20429564  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||   |||||||||||||    
T  20429565 tcactaatttcccttgttaattttgctttt 20429594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 21623031 - 21623149
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||| ||||||||||||||| |||| |||||| |||||||||| || ||||||| ||| |||||    
T  21623031 aaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgcccaaggaatttgtgaggaatttcattttttccgtcactaattt 21623130  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| || |||||||||||    
T  21623131 ccctcgct-attttgctttt 21623149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 33427704 - 33427818
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||  | ||| |||||||||    
T  33427704 ttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcat-tttttggtcactaatttccct 33427802  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||| ||||    
T  33427803 cgctaattttgttttt 33427818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 20924089 - 20923968
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| |||||||||||||||||| | |||||| |||||||||||||| ||||||  ||||| | ||  ||||||| ||||||  ||| |||    
T  20924089 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgtgaccaacaaatttgtaagagattttattttttccatcactaat 20923990  T
Q  210 ttccctccctaattttgctttt 231  Q
    |||||||| ||||||| |||||    
T  20923989 ttccctccataattttactttt 20923968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 22501594 - 22501719
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| |||||||||| | ||||||||||| ||||||||||| ||||||||||| |||   ||||||| |||||||    
T  22501594 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcattaaattttgcggccaaagaatttgtgaaagattttattttttccg 22501693  T
Q  202 acacaaatttccctccctaattttgc 227  Q
     ||| ||||| | ||| |||||||||    
T  22501694 tcactaattttcatccttaattttgc 22501719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 23539248 - 23539361
Alignment:
Q  118 agtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctcc 217  Q
    ||||| |||| || |||||||||| | ||||||||||| ||||||||||||| |  |||||| |||||||||| || ||||||| ||| ||||||||||     
T  23539248 agtgagggaatacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgaggaatttcattttttccgtcactaatttccctcg 23539347  T
Q  218 ctaattttgctttt 231  Q
    ||||||||||||||    
T  23539348 ctaattttgctttt 23539361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 23699964 - 23699835
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| |||| ||||||  |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23699964 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctttaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23699865  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  23699864 tcactaatttccctcgctaatttttctttt 23699835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 232
Target Start/End: Original strand, 27304878 - 27305000
Alignment:
Q  108 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 207  Q
    |||||||||| |||||||||| | ||| |||||| | ||||||||||||||||||||||| |||| |||||| || || ||||||| ||||| | ||| |    
T  27304878 agggaaattt-gtgaaggaaa-cgtgacatccctctctaattccgtcactaaattttgcggccaaggaatttgtgggggattttattttttctgtcacta 27304975  T
Q  208 atttccctccctaattttgcttttc 232  Q
    ||||||||||||||||||| |||||    
T  27304976 atttccctccctaattttgtttttc 27305000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 42926559 - 42926435
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||| ||||||||| | |||||||||||||||| | ||||||||||||||||||||||||| ||  ||||| |||||||||| | | ||||||    
T  42926559 ttagtgagggatatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgtgaggaatttcatttttttcc 42926460  T
Q  201 gacacaaatttccctccctaatttt 225  Q
    | ||| ||||| |||| ||||||||    
T  42926459 gtcactaattttcctcgctaatttt 42926435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 31042251 - 31042374
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||||||||||| |||||| |||| |||||||| ||||||     
T  31042251 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaattttattttttcca 31042350  T
Q  202 acacaaatttccctccctaatttt 225  Q
      || ||||| |||| ||||||||    
T  31042351 taactaattttcctctctaatttt 31042374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 15969796 - 15969914
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacacaaatttc 212  Q
    ||||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||| ||||| | | ||||||| ||| ||| ||    
T  15969796 atttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgagaaatttcatttttttccgtcactaatatc 15969895  T
Q  213 cctccctaattttgctttt 231  Q
    ||||  ||||||| |||||    
T  15969896 cctcattaattttactttt 15969914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 11890286 - 11890177
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||| |||| ||||||   ||| | ||||||||||||||| ||||||||||||||||||| ||||||| |||||||    
T  11890286 ttagtgaggaaaatttagtgagggaaaatatgatatccctcgctaacttcgtcactaaattttgagaccaaagaatttatgagggattttattttttccg 11890187  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  11890186 tcactaattt 11890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 199
Target Start/End: Original strand, 45664768 - 45664865
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 199  Q
    |||| ||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||    
T  45664768 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttc 45664865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 32267352 - 32267471
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || |||||||   |||||||| | |||||| ||||||||||||||||| |||  ||||| ||||| ||||||| ||||||| |||     
T  32267352 gagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgatcaagaaatttgtgagggattttat-ttttccgtcact 32267450  T
Q  207 aatttccctccctaattttgc 227  Q
    ||| |||||||||||||||||    
T  32267451 aatctccctccctaattttgc 32267471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 2650945 - 2650838
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 223  Q
    ||||||| | |||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| || ||||||| ||||||    
T  2650945 ggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaaattccctcactaatt 2650846  T
Q  224 ttgctttt 231  Q
    || |||||    
T  2650845 tttctttt 2650838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 21871611 - 21871697
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| |||  |||| |||| ||||||||| ||||    
T  21871611 taattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgccactgattttcctcgctaattttgttttt 21871697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 26415424 - 26415553
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || | ||||| | |||||||| | ||||| |||||||||||||| ||| |||| ||||| |||| |||||||| ||||||     
T  26415424 ttagtgagggaattttagagaggaaaaacgtaaaatccctctttaatttcgtcactaaattttacgatcaaaaaatttgtgagaaattttattttttcca 26415523  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||| || |||||||| |||||    
T  26415524 tcactaatttccttctctaattttactttt 26415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 1822118 - 1821996
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| | ||||||||||||| || | ||||||| ||| ||||||||  || | | |||||| ||||||||||||| ||||||| ||| ||||   ||    
T  1822118 ttagtgaggaaaaacatgaaatctctctctaattccttcagtaaattttaagatcgaggaatttgtgaggaattttatattttccgtcactaatt---ct 1822022  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||| || |||||    
T  1822021 ccctaattttgcttttcatagtagtg 1821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 2093487 - 2093372
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | ||||| || | |||||||||||||||||||| ||| ||||   ||| |||||||||| || ||||||| ||| |||||||||    
T  2093487 ttagtgagggaaaacgtcaaatctctctctaattccgtcactaaatttttcgatcaaattttttttgaggaatttcattttttccgtcactaatttccct 2093388  T
Q  216 ccctaattttgctttt 231  Q
    | || ||||| |||||    
T  2093387 cgctgatttttctttt 2093372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 10222758 - 10222648
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||| ||| |||||| | |||||||| | |||||| |||| |||||||||||| |||| |||||||||| |||||||  ||||| | ||| |||||    
T  10222758 aaatttagagaaagaaaacgtaaaatccctctctaattctgtcattaaattttgcgatcaaa-aatttatgagaaattttactttttctgtcactaattt 10222660  T
Q  212 ccctccctaatt 223  Q
     |||||||||||    
T  10222659 tcctccctaatt 10222648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 38090336 - 38090402
Alignment:
Q  175 aatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
    ||||| ||||| ||||||| ||||||| |||||||||||||||||||||||||| ||| || |||||    
T  38090336 aatttgtgagggattttattttttccgtcacaaatttccctccctaattttgctattcctagtagtg 38090402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 27130339 - 27130461
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||  |||||||||| ||  ||||||||||||| ||||||||  || |||||| ||||| ||||||| ||||||  |||     
T  27130339 gagggaaatttagagagggaaaatgtgaaatccctcta--attccgtcactaacttttgcgattaacgaatttgtgaggcattttatattttccatcact 27130436  T
Q  207 aatttccctccctaattttgctttt 231  Q
     ||||| ||| | ||||||||||||    
T  27130437 gatttctctctcgaattttgctttt 27130461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 225
Target Start/End: Complemental strand, 25777246 - 25777128
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||| ||||||| || | ||||| | |||||||||||| ||| |||| ||||| ||||| ||||||| || |  | |||     
T  25777246 gagggaaatttagagagggaaaacgtgaaatcactctctaatttcatcactaaattttacgatcaaaaaatttgtgagggattttattttattggtcact 25777147  T
Q  207 aatttccctccctaatttt 225  Q
    ||||| | |||||||||||    
T  25777146 aattttcttccctaatttt 25777128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 1841889 - 1841792
Alignment:
Q  134 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttc 232  Q
    |||||||| | ||||||| ||| |||||||||| | ||| |||||| ||||| ||||||| |||||  | || |||||| || ||||||||||||||||    
T  1841889 aaatccctctctaattccttcagtaaattttgcaatcaaggaatttgtgagggattttattttttctta-actaatttctcttcctaattttgcttttc 1841792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 27132817 - 27132731
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||| ||||||||||||||| || ||  ||||| ||| | ||||||| |||||||  || |||||||||| |||||||| |||||    
T  27132817 taattctgtcactaaattttgcaacaaacaaatttgtgatggattttattttttccgttaccaatttccctctctaattttactttt 27132731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 246
Target Start/End: Original strand, 33914057 - 33914201
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33914057 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 33914156  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaata 246  Q
     |||||||||||||||||||||||||||||| || ||||| ||||    
T  33914157 tcacaaatttccctccctaattttgcttttcctagtagtgaaata 33914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 235
Target Start/End: Original strand, 25147719 - 25147852
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25147719 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 25147818  T
Q  202 acacaaatttccctccctaattttgcttttctta 235  Q
     || ||||||||||| ||||||||||||||||||    
T  25147819 tcataaatttccctctctaattttgcttttctta 25147852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 5399607 - 5399746
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  5399607 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgttttccg 5399706  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||| ||||||||| |||||||||| || |||||    
T  5399707 tcacaaattttcctccctaagtttgcttttcctagtagtg 5399746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 119 - 241
Target Start/End: Complemental strand, 9059074 - 9058952
Alignment:
Q  119 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccc 218  Q
    |||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| |||||||||||||| | ||||||||||||||||    
T  9059074 gtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttcagtcacaaatttccctccc 9058975  T
Q  219 taattttgcttttcttaatagtg 241  Q
    |||||||||||||| || |||||    
T  9058974 taattttgcttttcctagtagtg 9058952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 22168266 - 22168395
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||| ||| | |||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||    
T  22168266 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccggcactaaattttgcgaccaaggaatttatgaggaatttcattttttccg 22168365  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  22168366 tcactaatttccctcgctaattttgctttt 22168395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 1638445 - 1638584
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||||||||||| |||   ||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||    
T  1638445 ttagtgaggaaaatttagtgagggaaaacatgaaattcctccctaattccgtcactaaattttgcgaccaaagaatatgtgagggattttattttttccg 1638544  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||||||||||||| ||||| || |||||    
T  1638545 tcactaatttccctccctaattttgtttttcctagtagtg 1638584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 32175876 - 32175747
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||| |||||||    
T  32175876 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccg 32175777  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  32175776 tcactaatttccctcgttaattttgctttt 32175747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 2275817 - 2275694
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  2275817 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 2275718  T
Q  202 acacaaatttccctccctaatttt 225  Q
     ||| |||||||||| ||||||||    
T  2275717 tcactaatttccctcgctaatttt 2275694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 55309352 - 55309222
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||    
T  55309352 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 55309253  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||| |||||||||| ||||||||||||||    
T  55309252 gtcactaatttccctcgctaattttgctttt 55309222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 8878889 - 8879010
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||    
T  8878889 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgaccaacgaatttctgagagattttattttttccgtcactaat 8878988  T
Q  210 ttccctccctaattttgctttt 231  Q
    ||||||| || |||||||||||    
T  8878989 ttccctctctgattttgctttt 8879010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 12071960 - 12072101
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||||||||||||| |||||||| | |||||||||||||||||||||||| ||| |||||||||| |||||| || |||||      
T  12071960 ttagtgagggatatttagtgaaggaaaacataaaatccctctctaattccgtcactaaattttgcgatcaaggaatttatgaagaatttcattttttcga 12072059  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgta 243  Q
     ||| |||||| ||| ||||||||||||||  ||||||||||    
T  12072060 tcactaatttcgctcgctaattttgctttttctaatagtgta 12072101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 19839177 - 19839306
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  19839177 ttagcgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccg 19839276  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  19839277 tcactaatttccctcgctaattttgctttt 19839306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 22128451 - 22128322
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||||||||||| |||||| ||||  ||||||| |||||||    
T  22128451 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccg 22128352  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||||| |||||| ||||    
T  22128351 tcactaatttccctccctgattttgttttt 22128322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 27040164 - 27040035
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||| | |||||||    
T  27040164 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttcttttttccg 27040065  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  27040064 tcactaatttccctcgctaattttgctttt 27040035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 37378762 - 37378633
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  37378762 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 37378663  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  ||||| |||| ||||||||||||||    
T  37378662 tcaataattttcctcgctaattttgctttt 37378633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 46286368 - 46286239
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  46286368 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 46286269  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||| || ||||||||||||||    
T  46286268 tcactaatttccgtcactaattttgctttt 46286239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 38619859 - 38619974
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||  |||||||||    
T  38619859 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttatgaggaatttcattttttccgtcattaatttccct 38619958  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  38619959 cgctaattttgctttt 38619974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 5473847 - 5473976
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||  |||||||||| || ||| |||    
T  5473847 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaattggtgaggaatttcatttttcccg 5473946  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  5473947 tcactaatttccctcgctaattttgctttt 5473976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 36689675 - 36689804
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||  ||||||| |||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||||| || ||||||     
T  36689675 ttagcgagggaaatttagtgtgggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgagaaatttcattttttcca 36689774  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||| ||||    
T  36689775 tcactaatttccctcgttaattttgttttt 36689804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 44783485 - 44783610
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccct-ttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacac 205  Q
    |||||| |||||  ||||||||||||||||||||| || ||||||||||| |||||||||||||||| |||||| |||||||||| || ||||||| |||    
T  44783485 gagggatatttatcgaaggaaaacatgaaatccctcttctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcac 44783584  T
Q  206 aaatttccctccctaattttgctttt 231  Q
     |||||||||| ||| ||||||||||    
T  44783585 taatttccctcgctagttttgctttt 44783610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 45532718 - 45532578
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||| |||||||||||| |||  ||||| |||||||||| || |||||||    
T  45532718 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 45532619  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| ||||||||||  |||||||||||||  |||||||||    
T  45532618 tcactaatttccctcgttaattttgctttttctaatagtgt 45532578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 4586887 - 4586768
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||| ||| ||| |||||| |||||||||| || ||||||| ||| |||||    
T  4586887 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgatcaaggaatttgtgaggaatttcattttttccgtcactaattt 4586788  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  4586787 ccctcgctaattttgctttt 4586768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 38645762 - 38645877
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||| || ||||||| ||  |||||||||    
T  38645762 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcaataatttccct 38645861  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  38645862 cgctaattttgctttt 38645877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 12105995 - 12106119
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||||||| |||| | ||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||  ||  |||||||||    
T  12105995 ttagtgagggaaaacatgaaacccctctctaattccgtcactaaattt-gcgaccaaagaatttatgagaaattttattttttccatcaataatttccct 12106093  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    | |||||||| |||||  ||||||||    
T  12106094 cgctaattttactttttctaatagtg 12106119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18051837 - 18051966
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||    ||||| |||| ||||| || |||||||    
T  18051837 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 18051936  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  18051937 tcactaatttccctcactaattttgctttt 18051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 7112071 - 7111956
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | |||||||| |||||||||||||||||||||| |||||||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  7112071 ttagtgagggaaaatgtaaaatccctctataattccgtcactaaatttttcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 7111972  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  7111971 cgctaattttgctttt 7111956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 9670604 - 9670489
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  9670604 ttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 9670505  T
Q  216 ccctaattttgctttt 231  Q
    | |||||||| |||||    
T  9670504 cgctaatttttctttt 9670489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 29625337 - 29625452
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| |  |||||| |||||||||| || ||||||| ||  |||||||||    
T  29625337 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatggaatttgtgaggaatttcattttttccgtcattaatttccct 29625436  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  29625437 cgctaattttgctttt 29625452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 30507999 - 30508114
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| |||| || |||| |||| |||    
T  30507999 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatttttttcgtcacagattttcct 30508098  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  30508099 cgctaattttgctttt 30508114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 25026565 - 25026695
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | ||||| || | ||||||||||||||||||||||||| || |||||| |||| ||||| || ||||||| ||| |||||    
T  25026565 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgagaaatttcattttttccgtcactaattt 25026664  T
Q  212 ccctccctaattttgcttttcttaatagtgt 242  Q
    ||||| |||||||| |||||  |||||||||    
T  25026665 ccctcactaattttactttttctaatagtgt 25026695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 38223513 - 38223631
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || |||||||   |||||||| | |||||| ||||||||||||||||||||| |||||| | ||||||||||| ||||||| |||     
T  38223513 gagggaaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtaaggaattttattttttccgtcact 38223612  T
Q  207 aatttccctccctaatttt 225  Q
    ||| |||||||||||||||    
T  38223613 aatctccctccctaatttt 38223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 13565054 - 13564925
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||  |||||| |||||| ||| |||||| ||  ||||||    
T  13565054 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttatgaccaaggaatttgtgatgaatttcattatttccg 13564955  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  13564954 tcactaatttccctcgctaattttgctttt 13564925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 30269127 - 30268998
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||  | ||||| || | ||||||||||||||||||||||||||||| |||||  ||||||||| || |||||||    
T  30269127 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30269028  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  ||||||||| ||||||||||||||    
T  30269027 tcactgatttccctcgctaattttgctttt 30268998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 30283062 - 30283191
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||  | ||||| || | ||||||||||||||||||||||||||||| |||||  ||||||||| || |||||||    
T  30283062 ttagtgagggaaatttagcgagggaaaatgtaaaatctctctctaattccgtcactaaattttgcgaccaaataatttgcgaggaatttcattttttccg 30283161  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  ||||||||| ||||||||||||||    
T  30283162 tcactgatttccctcgctaattttgctttt 30283191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 9238721 - 9238625
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||| |||||||||||||| ||| |||||    
T  9238721 taattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgctttttttagtagtg 9238625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 19680558 - 19680434
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| ||||||| | |||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| |||     
T  19680558 gagggaaattttgtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcact 19680459  T
Q  207 aatttccctccctaattttgctttt 231  Q
    || ||||||| |||||||| |||||    
T  19680458 aaattccctcactaatttttctttt 19680434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 22156740 - 22156652
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| |||||    
T  22156740 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaattt 22156652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 13028945 - 13028826
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||  || ||||||| ||| |||||    
T  13028945 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattgcattttttccgtcactaattt 13028846  T
Q  212 ccctccctaattttgctttt 231  Q
     |||| |||| |||||||||    
T  13028845 tcctcgctaagtttgctttt 13028826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 18714910 - 18715029
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||| | | ||||| | |||||||| | ||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||| |||  ||||    
T  18714910 aaatttagtaaggaaaaacgtaaaatccctctctaattccgtcactaaattttgagaccaaggaatttgtgaggaattttattttttccgtcacttattt 18715009  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||| ||||||||    
T  18715010 ccctcgctaatattgctttt 18715029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 24682444 - 24682337
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 223  Q
    ||||||| |||||||||| | |||||||  ||||||||||||||||||  |||||| ||||||||||||| ||||||| ||  |||||||||||||||||    
T  24682444 ggaaaacgtgaaatccctctctaattccaccactaaattttgcgaccatggaatttgtgaggaattttattttttccgtcattaatttccctccctaatt 24682345  T
Q  224 ttgctttt 231  Q
    || |||||    
T  24682344 tttctttt 24682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 39234940 - 39235068
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatg-ttttcc 200  Q
    |||| ||||||||||||| |||||||||| ||||||| || ||  |||  || ||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  39234940 ttagtgagggaaatttagagaaggaaaacgtgaaatctctcta--attttgttactaaattttgcgaccaaaaaatttgtgagaaattttatgtttttcc 39235037  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    |  |||| |||||||||||||||||| ||||    
T  39235038 gttacaagtttccctccctaattttggtttt 39235068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 54539294 - 54539413
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | ||||| || | ||||| ||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  54539294 aaatttagtgagggaaaacgtaaaatcactctttaattgcgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 54539393  T
Q  212 ccctccctaattttgctttt 231  Q
     |||  ||||||||||||||    
T  54539394 tccttgctaattttgctttt 54539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 225
Target Start/End: Original strand, 9913261 - 9913379
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||| ||||| || ||||||| |||||||||| | |||||| |||||||||||||||||||||  || || ||||| |||| || ||||||| |||     
T  9913261 gagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttccgtcact 9913360  T
Q  207 aatttccctccctaatttt 225  Q
    ||||| |||||||||||||    
T  9913361 aattttcctccctaatttt 9913379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 110 - 232
Target Start/End: Original strand, 29238429 - 29238551
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| | ||||||| ||||| || | |||||| ||||||||||||||  |||||||||||| ||||  ||||||| ||||||| ||  |||    
T  29238429 ggaaatttagtgaggaaaaacataaaatctctatctaattctgtcactaaattttgaaaccaaagaatttgtgagagattttattttttccgtcaataat 29238528  T
Q  210 ttccctccctaattttgcttttc 232  Q
    ||||||||||| ||||| |||||    
T  29238529 ttccctccctagttttgtttttc 29238551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 42055438 - 42055524
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||| || |||| || |||| ||||||||| ||||||||||||||    
T  42055438 taattccgttactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcgtcacagatttccctcgctaattttgctttt 42055524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 9239406 - 9239297
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | ||||||||||| | |||||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||    
T  9239406 ttagtgagggaaaacgtgaaatccctctctaattccgtcattcaattttgcgaccaaggaatttgtgagcaatttcattttttccgtcactaatttccct 9239307  T
Q  216 ccctaatttt 225  Q
    |  |||||||    
T  9239306 cgttaatttt 9239297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 16915375 - 16915496
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| |||||| |||||||| || | |||||  |||||||||||||||||||||  ||||| ||||  ||||||| ||||||  ||| |||    
T  16915375 ggaaatttagtgagggaaaatatgaaatctctctctaattttgtcactaaattttgcgaccaacaaatttgtgagagattttattttttccatcactaat 16915474  T
Q  210 ttccctccctaattttgctttt 231  Q
    || ||||||| |||||||||||    
T  16915475 tttcctccctgattttgctttt 16915496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 30568130 - 30568009
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    |||||||| |||| ||||||| | ||||| || | ||||||||||| |||||||| |||||| ||||||| |||||||||| || ||||||| ||| |||    
T  30568130 ggaaattttgtgagggaaaacgtaaaatctctctctaattccgtcattaaattttacgaccatagaatttgtgaggaatttcattttttccgtcactaat 30568031  T
Q  210 ttccctccctaattttgctttt 231  Q
    ||| ||| ||||||||| ||||    
T  30568030 ttcgctcgctaattttgttttt 30568009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 211
Target Start/End: Original strand, 313611 - 313694
Alignment:
Q  128 aacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||||||||| | |||||  || ||||||||||||||||||||||||||||||| ||||||| ||||||| ||| |||||    
T  313611 aacatgaaatccctctctaattatgttactaaattttgcgaccaaagaatttatgagggattttattttttccgtcactaattt 313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 4606954 - 4606828
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  ||||||| || | ||||||||||||||||||||||| ||||  ||||| |||   ||||||| || |||| ||| |||||||||    
T  4606954 ttagtgagggaaaaagtgaaatcactctctaattccgtcactaaattttgcggccaagaaatttgtgacagattttattttgtccgtcactaatttccct 4606855  T
Q  216 ccctaattttgcttttcttaatagtgt 242  Q
    |||||||||| |||||| || ||||||    
T  4606854 ccctaattttacttttcctagtagtgt 4606828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 171
Target Start/End: Complemental strand, 37761976 - 37761912
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgacca 171  Q
    |||| ||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  37761976 gaggaaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacca 37761912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 4627207 - 4627088
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||  | ||||| || | ||||| |||||||||||||| ||| |||  ||||| |||||||||| || ||||||| ||  |||||    
T  4627207 aaatttagtgagggaaaatgtaaaatctctctctaatttcgtcactaaattttacgatcaagaaatttgtgaggaatttcattttttccgtcattaattt 4627108  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  4627107 ccctcgctaattttgctttt 4627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 6553816 - 6553911
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| |||||||||||||| | |||||  || ||||||||||||||||||  ||||||||||| ||||||| ||||||| ||| |||||    
T  6553816 ttagtgagggataacatgaaatccctctctaattatgttactaaattttgcgaccaagaaatttatgagggattttattttttccgtcactaattt 6553911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 14944758 - 14944853
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||| || ||| |||||    
T  14944758 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttacgtcactaattt 14944853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 231
Target Start/End: Complemental strand, 30420149 - 30420043
Alignment:
Q  125 gaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattt 224  Q
    ||||||||||||| ||| | ||||| |||||||||||  | |||||||  ||||| | | ||||||||| ||||||| ||| ||||| ||||||||||||    
T  30420149 gaaaacatgaaattcctctctaatttcgtcactaaatgcttcgaccaagtaatttgtaatgaattttattttttccgtcactaattttcctccctaattt 30420050  T
Q  225 tgctttt 231  Q
    |||||||    
T  30420049 tgctttt 30420043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 18744209 - 18744100
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||  |||||   ||||| |||| ||||| || |||||||    
T  18744209 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttatgaccatgaaatttgtgagaaatttcattttttccg 18744110  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  18744109 tcactaattt 18744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 241
Target Start/End: Original strand, 3613017 - 3613133
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc-gacacaaatttccctccctaattt 224  Q
    ||||| |||||| ||| | ||||| |||||||||| ||||||||||| |||||| ||||| | ||||| ||||   | ||| || |||||||||||||||    
T  3613017 aaaacgtgaaattcctctctaatttcgtcactaaaatttgcgaccaaggaatttgtgagggaatttattttttttagccaccaaattccctccctaattt 3613116  T
Q  225 tgcttttcttaatagtg 241  Q
    |||||||  ||||||||    
T  3613117 tgctttttctaatagtg 3613133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 145 - 225
Target Start/End: Original strand, 34557224 - 34557304
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 225  Q
    ||||||||||| ||||||||| |||||| |||||| ||| | ||||||| ||||||| ||| ||||| |||| ||||||||    
T  34557224 taattccgtcattaaattttgtgaccaaggaatttgtgaaggattttattttttccgtcactaattttcctcactaatttt 34557304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 25225106 - 25225224
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 210  Q
    ||||||||| ||| |||| | |||||||||| | |||||| || | |||||||||||| ||||||||||   ||  ||||||| ||||||| ||   |||    
T  25225106 gaaatttagagaaagaaatcgtgaaatccctctctaattctgttattaaattttgcgatcaaagaatttgacag--attttatattttccgtcattgatt 25225203  T
Q  211 tccctccctaattttgctttt 231  Q
    ||||||||||||||| |||||    
T  25225204 tccctccctaatttttctttt 25225224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 45091282 - 45091338
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga 168  Q
    ||||||||||| ||||||| | |||||| | | ||||||||||||||||||||||||    
T  45091282 aaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcga 45091338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 23104371 - 23104442
Alignment:
Q  127 aaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 198  Q
    ||||||||||||||| | ||||   ||| |||||||||||||||| ||||||| ||| ||||||||| ||||    
T  23104371 aaacatgaaatccctctctaatcatgtccctaaattttgcgaccatagaatttgtgatgaattttatttttt 23104442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 30219334 - 30219474
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30219334 ttagtgagggaaatttagtgaggaaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttatgaggaattttatgttttccg 30219433  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     |||||||||||||||||||||||||||||| || ||||||    
T  30219434 tcacaaatttccctccctaattttgcttttcctagtagtgt 30219474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 241
Target Start/End: Original strand, 19610339 - 19610473
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  19610339 gagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcaca 19610438  T
Q  207 aatttccctccctaattttgcttttcttaatagtg 241  Q
    |||||||||||||||||||||||||| || |||||    
T  19610439 aatttccctccctaattttgcttttcctagtagtg 19610473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 16299857 - 16299996
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  16299857 ttagtgagggaaatttggtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 16299956  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     |||||||||| ||||||||||||||||||| || |||||    
T  16299957 tcacaaatttcgctccctaattttgcttttcctagtagtg 16299996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 29215988 - 29216127
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29215988 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 29216087  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||| ||||| |||||||||||||| || |||||    
T  29216088 tcacaaattttcctccataattttgcttttcctagtagtg 29216127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 15064117 - 15063991
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  15064117 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 15064018  T
Q  216 ccctaattttgcttttcttaatagtgt 242  Q
    ||||||||||||||||| || ||||||    
T  15064017 ccctaattttgcttttcctagtagtgt 15063991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 50665761 - 50665636
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||    
T  50665761 ttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgatcaaagaatttgtgaggaattttatgttttccgtcataaatttccct 50665662  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    | |||||||||||||||||| |||||    
T  50665661 ctctaattttgcttttcttagtagtg 50665636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 25882566 - 25882706
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||||| || |||||||    
T  25882566 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccg 25882665  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  25882666 tcactaatttccctcgctaattttgctttttctaatagtgt 25882706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 27449084 - 27449213
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  27449084 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 27449183  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  27449184 tcactaatttccctcgctaattttgctttt 27449213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 19270003 - 19269863
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19270003 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19269904  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  19269903 tcactaatttccctcgctaattttgctttttctaatagtgt 19269863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 18091686 - 18091547
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||| |||||||||| || |||||||    
T  18091686 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccg 18091587  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| |||||||||||||| ||| |||||    
T  18091586 tcactaatttccctcgctaattttgctttttttagtagtg 18091547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 49915447 - 49915586
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||  ||||| | ||| |||||||||||||||    
T  49915447 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgactaagaaatttgttagggattttatgttttccg 49915546  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||||||||  ||||||| ||||||||| |||||    
T  49915547 tcacaaatttccctctttaattttacttttcttagtagtg 49915586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 5744426 - 5744551
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||| ||||||||| |||    
T  5744426 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5744525  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||| || |||||    
T  5744526 ccctaattttgcttttcctagtagtg 5744551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 5781385 - 5781510
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||| ||||||||| |||    
T  5781385 ttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggcattttatgttttccgtcacaaattttcct 5781484  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||| || |||||    
T  5781485 ccctaattttgcttttcctagtagtg 5781510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 11915754 - 11915883
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  11915754 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 11915853  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  11915854 tcactaatttccctcgctaattttgctttt 11915883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 37283549 - 37283658
Alignment:
Q  132 tgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||| | ||||||||||||||||||||  |||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37283549 tgaaatccctctctaattccgtcactaaattttatgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccctccctaattttgctttt 37283648  T
Q  232 cttaatagtg 241  Q
    | ||||||||    
T  37283649 cctaatagtg 37283658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 5260933 - 5261062
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||| |||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  5260933 ttagtgagggaaatatagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 5261032  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  5261033 tcactaatttccctcactaattttgctttt 5261062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 18104669 - 18104540
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| |||||||||||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  18104669 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttaattttttccg 18104570  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  |||||||||| ||||||||||||||    
T  18104569 tcaataatttccctcgctaattttgctttt 18104540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 112 - 247
Target Start/End: Original strand, 13921331 - 13921466
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  13921331 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 13921430  T
Q  212 ccctccctaattttgcttttcttaatagtgtaataa 247  Q
     |||| ||||||||||||||  || |||||||||||    
T  13921431 tcctcgctaattttgctttttctagtagtgtaataa 13921466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 26098823 - 26098938
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||  ||| |||||||||    
T  26098823 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccatcactaatttccct 26098922  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  26098923 cgctaattttgctttt 26098938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 48404866 - 48404985
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  48404866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 48404965  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  48404966 ccctcgctaattttgctttt 48404985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18539800 - 18539929
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  18539800 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttttgaggaatttcattttttccg 18539899  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  18539900 tcactaatttccctctctaattttgctttt 18539929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 19223445 - 19223574
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||  ||||||| | |||||||| | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  19223445 ttagtgagggaaatttagtgggggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 19223544  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  19223545 tcaccaatttccctcgctaattttgctttt 19223574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 17762638 - 17762762
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  17762638 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 17762737  T
Q  202 acacaaatttccctccctaattttg 226  Q
     ||| |||||||||| |||||||||    
T  17762738 tcactaatttccctcgctaattttg 17762762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 19063958 - 19064082
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  19063958 ttagtgagggatatttagtgagggaaaacatgaaatcgctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 19064057  T
Q  202 acacaaatttccctccctaattttg 226  Q
     ||| |||||||||| |||||||||    
T  19064058 tcactaatttccctcgctaattttg 19064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 21088758 - 21088887
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| |||||||||||||||||| |  ||||||||||  ||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||    
T  21088758 aaatttagtgagggaaaacatgaaatccctctcgaattccgtcatcaaattttgcgaccaaggaatttgtgag--attttattttttccgtcactaattt 21088855  T
Q  212 ccctccctaattttgcttttcttaatagtgta 243  Q
    |||||||||| ||||||||||||| |||||||    
T  21088856 ccctccctaactttgcttttcttagtagtgta 21088887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 225
Target Start/End: Original strand, 8428167 - 8428290
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||||||||| || | |||||||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  8428167 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 8428266  T
Q  202 acacaaatttccctccctaatttt 225  Q
     ||| |||||||||| ||||||||    
T  8428267 tcactaatttccctcgctaatttt 8428290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 21020061 - 21020200
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||| | |||||||| ||||||||| |||||| | | |||||||||||||||||||||| ||||| |||||| ||||  ||||||| |||||||    
T  21020061 ttagtgagggcagtttagtgagggaaaacataaaatccttctctaattccgtcactaaattttgcaaccaaggaatttgtgagagattttattttttccg 21020160  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||||||||||||||||||| || |||||    
T  21020161 tcactaatttccctccctaattttgcttttcctagtagtg 21020200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 1628211 - 1628340
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| |||||||||| | ||||| |||||||||||||| |||| || |||||||||||||||||||| ||||||     
T  1628211 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaatttcgtcactaaattttacgactaaggaatttatgaggaattttattttttcca 1628310  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  ||||||||||||||||||| |||||    
T  1628311 tcattaatttccctccctaattttactttt 1628340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 8110335 - 8110464
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||| |||||||| ||||||| |||||| |||||||||| || |||||||    
T  8110335 ttagtgagggaaatttagtgagggaaaacgtaaaattcctctctaattccgtcattaaattttccgaccaaggaatttgtgaggaatttcattttttccg 8110434  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  8110435 tcactaatttccctcactaattttgctttt 8110464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 10941792 - 10941675
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||| ||| |||||||||||||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  10941792 atttaatgagggaaaacatgaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 10941693  T
Q  214 ctccctaattttgctttt 231  Q
    ||  ||||||||||||||    
T  10941692 cttactaattttgctttt 10941675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 11007822 - 11007693
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||| |||||| || |||||||    
T  11007822 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgacgaatttcattttttccg 11007723  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  11007722 tcactaatttcccttactaattttgctttt 11007693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 26390773 - 26390644
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| |||| |||| ||| |||||||||||||| | ||||||||||||||||||||| |||||| |||||| |||||||||| || |||||||    
T  26390773 ttagtgagggatattttgtgagggataacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccg 26390674  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| ||||||||||||||    
T  26390673 tcactaatttctctcgctaattttgctttt 26390644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 29704171 - 29704042
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | |||||||||||||||||||||||| || | ||||| |||||||||| || |||||||    
T  29704171 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctttaattccgtcactaaattttgcgatcataaaatttgtgaggaatttcattttttccg 29704072  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  29704071 tcactaatttccctcgctaattttgctttt 29704042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 36543745 - 36543874
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||  ||||||| ||||||     
T  36543745 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatctgtgagagattttattttttcca 36543844  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| ||||||||||||| |||||    
T  36543845 tcactaattttcctccctaatttttctttt 36543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 1311093 - 1310969
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||| ||| || ||||||| |||     
T  1311093 gagggaaatttagtgatggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggattttcattttttccgtcact 1310994  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| |||  ||||||||||||||    
T  1310993 aattttccttgctaattttgctttt 1310969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 11837348 - 11837224
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||| | ||||||| |||||||||||||| ||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||||  |||     
T  11837348 gagggatacttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccatcacg 11837249  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| ||||||||| ||||    
T  11837248 aatttccctcgctaattttgttttt 11837224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 29956373 - 29956497
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||  |||     
T  29956373 gagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcact 29956472  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| |||||||| |||||    
T  29956473 aatttccctcgctaattttactttt 29956497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 30005528 - 30005652
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| ||||||  |||||||||||| |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||  |||     
T  30005528 gagggaaattttgtgagggaaaatgtgaaatccctttctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccatcact 30005627  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| |||||||| |||||    
T  30005628 aatttccctcgctaattttactttt 30005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 21816727 - 21816846
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  21816727 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 21816826  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| |||||||| |||||    
T  21816827 ccctcgctaatttttctttt 21816846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 23217342 - 23217208
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||| ||||| ||||||| |||||||||| || ||||||  ||      
T  23217342 gaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgggaccatagaatttgtgaggaatttgattttttccctcatt 23217243  T
Q  207 aatttccctccctaattttgcttttcttaatagtg 241  Q
    ||||||||||||||||||| ||||| ||| |||||    
T  23217242 aatttccctccctaatttttctttttttagtagtg 23217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 116 - 241
Target Start/End: Complemental strand, 1745612 - 1745488
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  1745612 ttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaatttccct 1745514  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
    | |||||||||||||| ||| |||||    
T  1745513 cgctaattttgctttttttagtagtg 1745488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 4393489 - 4393360
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||    ||||| |||| ||||| || |||||||    
T  4393489 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccgtgaaatttgtgagaaatttcattttttccg 4393390  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  4393389 tcactaatttccctcactaattttgctttt 4393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 7623670 - 7623541
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||||||||||||||| | |||| ||||| || |||||||    
T  7623670 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatctgtgagaaatttcattttttccg 7623571  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| || ||||| |||||    
T  7623570 tcactaatttccctcgctgatttttctttt 7623541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 9652574 - 9652703
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||| |   ||||| |||||||||| || |||||||    
T  9652574 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 9652673  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| | ||||||||||||    
T  9652674 tcactaatttccctcgccaattttgctttt 9652703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 11085481 - 11085352
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| |||||||||||| |||||   |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  11085481 ttagtgagagaaatttagtgagggaaattgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttatgaggaatttcattttttccg 11085382  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
      ||  ||||| ||| |||||||| |||||    
T  11085381 ttactgatttctctcgctaattttactttt 11085352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 17582440 - 17582331
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| ||||||||||||| |||||||    
T  17582440 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttattttttccg 17582341  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  17582340 tcactaattt 17582331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 28389969 - 28390098
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||| | | |||||||||||||||||||||||||||| |||||| ||||  ||||||| |||||||    
T  28389969 ttagtgagggaaatttagtgagggaaaacgtgaaatccttctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccg 28390068  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| || ||||| |||||    
T  28390069 tcactaattttcctctctgattttactttt 28390098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 29236050 - 29236179
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  | ||| |||| ||||| || ||||||| ||| |||||    
T  29236050 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaattttgtgagaaatttcattttttccgtcactaattt 29236149  T
Q  212 ccctccctaattttgcttttcttaatagtg 241  Q
    ||||| ||||||||||||||  ||||||||    
T  29236150 ccctcgctaattttgctttttctaatagtg 29236179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 26830581 - 26830441
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| ||||||||||||| || ||||||| |||||||||| | |||||||||||| ||||||||||||||  |||||| |||||||||||| | ||||||    
T  26830581 ttagtgagggaaatttagagagggaaaacgtgaaatccctctctaattccgtcacaaaattttgcgaccatggaatttgtgaggaattttatttttttcc 26830482  T
Q  201 gacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
    | ||  ||||| ||||||||||||| |||||  ||||||||    
T  26830481 gtcattaattttcctccctaatttttctttttctaatagtg 26830441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 13905163 - 13905048
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||| ||    
T  13905163 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttcgct 13905064  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  13905063 ctctaattttgctttt 13905048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 19545506 - 19545615
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19545506 ttagtgagggaaatttagtgaggaaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19545605  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  19545606 tcactaattt 19545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 36564578 - 36564449
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||| |||||||||||| | ||||| |||||||||||| |||||||||||||| | | ||| ||||||| ||||||     
T  36564578 ttagtgagggaaattttgtgagggaaagcatgaaatccctctctaatttcgtcactaaattctgcgaccaaagaatctgtcagggattttattttttcca 36564479  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| ||||||||||||| |||||    
T  36564478 tcactaattttcctccctaatttttctttt 36564449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 31250089 - 31250209
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||||  |||||||| | |||||| |||||||||||||||||||||  ||||| | ||||||||||| ||||||| |||     
T  31250089 gagggaaatttagagagggaaaacacaaaatccctctctaattctgtcactaaattttgcgaccaagaaatttgtaaggaattttattttttccgtcact 31250188  T
Q  207 aatttccctccctaattttgc 227  Q
    ||| | |||||||||||||||    
T  31250189 aatcttcctccctaattttgc 31250209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 5565732 - 5565847
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | |||||  |||||||||||||||||||||  ||||| ||||  ||||||| ||||||| ||| |||||||||    
T  5565732 ttagtgagggaaaacgtgaaatccctctctaattatgtcactaaattttgcgaccaagaaatttgtgagagattttattttttccgtcactaatttccct 5565831  T
Q  216 ccctaattttgctttt 231  Q
    |||| |||||||||||    
T  5565832 ccctgattttgctttt 5565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 17269729 - 17269614
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| | |||| ||||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||  |   ||||||| |    
T  17269729 ttagtgaggaaaaatatgaaatccctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaattttattttttccatcgttaatttccat 17269630  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  17269629 cgctaattttgctttt 17269614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 23773487 - 23773602
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || | ||||| ||| |||||||||    
T  23773487 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttcttccgtcactaatttccct 23773586  T
Q  216 ccctaattttgctttt 231  Q
      ||||||||| ||||    
T  23773587 tactaattttgttttt 23773602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 43329888 - 43329773
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | |||||| | | |||||||||||||||||||| ||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  43329888 ttagtgagggaaaatgtaaaatccttctctaattccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 43329789  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  43329788 cgctaattttgctttt 43329773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 46012853 - 46012738
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||||  ||||||||||||||||| ||| |||||| ||||  ||||||| ||||||| ||| ||||| |||    
T  46012853 ttagtgagggaaaacatgaaatccctctctaattttgtcactaaattttgcgatcaaggaatttgtgagagattttattttttccgtcactaattttcct 46012754  T
Q  216 ccctaattttgctttt 231  Q
    |||| |||||||||||    
T  46012753 ccctgattttgctttt 46012738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 10803716 - 10803846
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||||||||||||| ||||||| | |||| ||| | ||||||||||| ||||||||||||||||  ||||| |||||||||| | | ||||||    
T  10803716 ttagcgagggaaatttagtgagggaaaacgtaaaattcctctttaattccgtcattaaattttgcgaccaagaaatttgtgaggaatttcatttttttcc 10803815  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||  |||||||||||||||||| ||||||    
T  10803816 gtcattaatttccctccctaatttggctttt 10803846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 8546265 - 8546370
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 225  Q
    ||||| |||||||||| | |||||||||||||||||||||||| ||  |||||| |||||||||| || ||||||| ||| ||||| |||| ||||||||    
T  8546265 aaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatggaatttgtgaggaatttcattttttccgtcactaattttcctcgctaatttt 8546364  T
Q  226 gctttt 231  Q
    ||||||    
T  8546365 gctttt 8546370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 11219134 - 11219263
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | ||||||||||| ||||||||||||| |  |||||| |||| ||||| || |||||||    
T  11219134 ttagtgaggaaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgactatggaatttgtgagaaatttcattttttccg 11219233  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  11219234 tcactaatttccctcgctaattttgttttt 11219263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 27212920 - 27212823
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 199  Q
    |||| ||||||||||||| || | ||||| |||||||||| | ||||||||||||||||||||||||| ||||||||| ||||| ||||||| |||||    
T  27212920 ttagtgagggaaatttagagaggaaaaacgtgaaatccctctttaattccgtcactaaattttgcgactaaagaatttgtgagggattttattttttc 27212823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 27968919 - 27969040
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| |||||||||||||||||| | |||||| |||| ||||||||||||||||  ||  | ||||  ||||||| | ||||| ||| |||    
T  27968919 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcattaaattttgcgaccaacaaaggtgtgagagattttatttgttccgtcactaat 27969018  T
Q  210 ttccctccctaattttgctttt 231  Q
    |||||||||| |||||||||||    
T  27969019 ttccctccctgattttgctttt 27969040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 28859597 - 28859710
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| | ||||| | |||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||| || ||||||| ||| |||||    
T  28859597 aaatttagtgaggtaaaacgtaaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccgtcactaattt 28859696  T
Q  212 ccctccctaatttt 225  Q
     |||| ||||||||    
T  28859697 tcctcgctaatttt 28859710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 3461435 - 3461320
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||||||| |||||||||||| |||  ||||| ||||||||||||| ||||| | ||| ||||||| |    
T  3461435 ttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgatcaagaaatttgtgaggaattttattttttctgtcactaatttcctt 3461336  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  3461335 cgctaattttgctttt 3461320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 15490031 - 15490169
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||||||  |||||| |||||||||| | |||||  |||||||||||||||||||||| ||||| ||||  ||||||| |||| ||    
T  15490031 ttagtgagggaaatttagtgagagaaaacgtgaaatccctctttaattt-gtcactaaattttgcgaccaaaaaatttgtgagagattttatttttttcg 15490129  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||  |||||| ||||||||||| ||| |||||    
T  15490130 tcactaatttttctccctgattttgctttttttagtagtg 15490169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 20088405 - 20088492
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 198  Q
    |||||||||||| | |||||||||||||| | | ||||||| ||||||||||||| |||||||||||||||||| |||||||| ||||    
T  20088405 gaaatttagtgaggcaaaacatgaaatccttctctaattccatcactaaattttgtgaccaaagaatttatgagaaattttatttttt 20088492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 242
Target Start/End: Complemental strand, 6447342 - 6447245
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
    |||||| ||||||||| |||| ||||||||||| |  |||||||||||| ||||||  ||| |||||||||||||||||||||||||| || ||||||    
T  6447342 taattctgtcactaaactttgagaccaaagaatctgcgaggaattttattttttccatcactaatttccctccctaattttgcttttcctagtagtgt 6447245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 20762045 - 20761960
Alignment:
Q  146 aattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| ||||||||||||| |||||||||||    
T  20762045 aattctgtcactaaattttgcgaccaaggaatttgtgagagattttattttttccgtcactaatttccctccctgattttgctttt 20761960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 111 - 243
Target Start/End: Complemental strand, 27182786 - 27182656
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 210  Q
    |||||||||||| |||||||| |||||| || | ||||| ||||||||||| ||| |||||| | |||| ||||| ||||||| ||||  | ||| ||||    
T  27182786 gaaatttagtgagggaaaacaagaaatctctctctaatttcgtcactaaatcttgtgaccaagggatttgtgagggattttatttttt--gtcactaatt 27182689  T
Q  211 tccctccctaattttgcttttcttaatagtgta 243  Q
    |||||||||||||||| ||||| || |||||||    
T  27182688 tccctccctaattttgtttttcctagtagtgta 27182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 6718723 - 6718815
Alignment:
Q  119 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||| ||||||| |||||||||||| |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| |||||    
T  6718723 gtgagggaaaacgtgaaatccctttctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaattt 6718815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 20615482 - 20615344
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| |||||||||| |||||| ||| | |||||| |||| |||||||| |||||||| ||||| ||||  ||||||| |||||||    
T  20615482 ttagtgagggaaatttagagaaggaaaacgtgaaattcctctctaattctgtcattaaattttacgaccaaaaaatttgtgagatattttattttttccg 20615383  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     | | ||||| ||||| ||||||| |||||| |||||||||    
T  20615382 tctctaattttcctccttaatttt-cttttc-taatagtgt 20615344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 22921928 - 22921976
Alignment:
Q  33 caaagtttaacaagataccataatctttcaacttcattcactcatataa 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  22921928 caaagtttaacaagataccataatctttcaacttcattcactcatataa 22921976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 46942488 - 46942612
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||| ||||| || ||||||| |||||||||| | |||||| |||||||||||||||||||||  || || ||||| |||| || ||||| | |||     
T  46942488 gagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccaagaaaattgtgagggatttaattttttctgtcact 46942587  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||| |||||||||||| ||||    
T  46942588 aatttccttccctaattttgatttt 46942612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 8543465 - 8543603
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||| |||||||||||||||   || || | |||||||| || ||||||     
T  8543465 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcattaaattttgcgaccatgaaacttgttaggaatttcat-ttttcca 8543563  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| ||||||||| ||||  ||||||||    
T  8543564 tcactaatttccctcgctaattttgttttttctaatagtg 8543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 31433733 - 31433872
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| |||||  | ||||||| |||||| ||| | |||||||||||||||||||| ||||||| |||||| |||| |||||||| |||||      
T  31433733 ttagtgagggaattttagaaagggaaaacgtgaaattcctctctaattccgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcta 31433832  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||  |||||||| ||||| ||| |||||    
T  31433833 tcactaatttccctatctaattttactttttttagtagtg 31433872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18380020 - 18380149
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||| ||| ||||||  | |||||||| | |||||||||||||||||||| ||| |||  ||||| ||| |||||| || |||||||    
T  18380020 ttagtgagggaaatttaatgagggaaaatgtaaaatccctctttaattccgtcactaaattttacgatcaagaaatttgtgaagaatttcattttttccg 18380119  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  ||||||||| |||||||| |||||    
T  18380120 tcactgatttccctcgctaattttactttt 18380149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 29451090 - 29451219
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| |||||||||||| ||||||| | |||||||| | |||||||||| | ||||||||| ||  | ||||||||||| ||||| || |||||||    
T  29451090 ttagcgagagaaatttagtgagggaaaacgtaaaatccctctctaattccgtcccaaaattttgcaactgaggaatttatgagaaatttcattttttccg 29451189  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||| ||||    
T  29451190 tcactaatttccctcgttaattttgttttt 29451219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 6088353 - 6088238
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||| | | ||||||||| | ||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  6088353 ttagtgagggaaaacgtaaaatccatctctaattccgttattaaattttgtgaccaaggaatttctgaggaatttcattttttccgtcactaatttccct 6088254  T
Q  216 ccctaattttgctttt 231  Q
      || |||||||||||    
T  6088253 tacttattttgctttt 6088238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 21490159 - 21490044
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | |||||||| | |||||| ||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||   ||||||||    
T  21490159 ttagtgagggaaaatgtaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcattgatttccct 21490060  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||| ||||    
T  21490059 cactaattttgttttt 21490044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 47263394 - 47263275
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | ||||  || | ||| || ||||||||||||||||||||| |||||| |||||||||| || ||||| | ||| |||||    
T  47263394 aaatttagtgagggaaaacgtaaaatttctatctaactctgtcactaaattttgcgaccaaggaatttgtgaggaatttaattttttctgtcaccaattt 47263295  T
Q  212 ccctccctaattttgctttt 231  Q
    || ||  |||||||||||||    
T  47263294 ccttcgttaattttgctttt 47263275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 189
Target Start/End: Complemental strand, 10772183 - 10772106
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatt 189  Q
    ||||||||||| |||||| ||||||||||| | ||||| ||||| ||||||||||||| ||| ||||| ||| |||||    
T  10772183 aaatttagtgagggaaaatatgaaatccctctctaatttcgtcattaaattttgcgactaaaaaatttgtgaagaatt 10772106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 50240756 - 50240851
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| ||||||||||| || | |||||  || ||||||||||||| |||| |||||||||||  ||||||| ||||||| ||| |||||    
T  50240756 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgcgtccaaggaatttatgagagattttattttttccgtcactaattt 50240851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 190
Target Start/End: Complemental strand, 23233288 - 23233214
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    ||||||| ||||||| |||||| ||| |  |||||| |||||||||||||||||||||| |||| |||| |||||    
T  23233288 ttagtgagggaaaacgtgaaattcctctcaaattccttcactaaattttgcgaccaaagtatttgtgagaaattt 23233214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 45304340 - 45304458
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| | |||| |||||||  ||||  |||||||||| |||||||||  || |||||| || | ||||||||||| ||||||| ||  |||||    
T  45304340 aaatttagtgaggaaaaatatgaaatttcttttaaattccgtcattaaattttgtaactaaagaaattgttaggaattttattttttccgtcattaattt 45304439  T
Q  212 ccctccctaattttgcttt 230  Q
    | |||| | ||||||||||    
T  45304440 ctctccttgattttgcttt 45304458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 27711285 - 27711236
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaa 173  Q
    ||||||||||||||  || | |||||||||||||||||||||||||||||    
T  27711285 ggaaaacatgaaatttctctctaattccgtcactaaattttgcgaccaaa 27711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 26963383 - 26963259
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||  | |||| ||| | ||||||||| |||||||||| | ||||||| |||| | |  ||||| || |||| || |||     
T  26963383 gagggaaatttagtgagggaaaatgtaaaattcctctctaattccgttactaaattttacaaccaaagtatttgtaaaaaatttcattttttacgtcact 26963284  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||||||  |||||||| ||||    
T  26963283 aatttccctcgttaattttgttttt 26963259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 23233219 - 23233182
Alignment:
Q  206 aaatttccctccctaattttgcttttcttaatagtgta 243  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  23233219 aaatttccctccctaattttgctttttctaatagtgta 23233182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 35579654 - 35579605
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaat 161  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||    
T  35579654 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaat 35579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 74680 - 74538
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  74680 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaattttatgttttccg 74581  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     ||||||||||||||||||||||| |||||| || ||||||||    
T  74580 tcacaaatttccctccctaattttacttttcctagtagtgtaa 74538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 17824755 - 17824626
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17824755 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17824656  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||||||||||||| ||||||||||||||    
T  17824655 tcacaaatttccctctctaattttgctttt 17824626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 17104004 - 17103875
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17104004 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 17103905  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||||||||| ||| ||||||||| ||||    
T  17103904 tcacaaatttctctctctaattttgttttt 17103875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 18844683 - 18844541
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||||||||||||||||||||||||| | |||||  || | ||||||||||||||||| ||||| ||||||||||||||||||||     
T  18844683 ttagtgagggaaatttagtgaaggaaaacatgaaatccctctctaattttgttattaaattttgcgaccaaaaaatttgtgaggaattttatgttttcca 18844584  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     |||||||| || |||||||||||||||||| || ||||||||    
T  18844583 tcacaaattaccatccctaattttgcttttcctagtagtgtaa 18844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 8555443 - 8555314
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||||| ||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  8555443 ttagtgagggaaatttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 8555344  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  8555343 tcactaatttccctcgctaattttgctttt 8555314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 3823131 - 3823271
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||    
T  3823131 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaatttcattttttccg 3823230  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  3823231 tcactaatttccctcgctaattttgctttttctaatagtgt 3823271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 27869248 - 27869380
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||  ||| |||||||    
T  27869248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccatcactaatttcc 27869347  T
Q  214 ctccctaattttgcttttcttaatagtgtaata 246  Q
    ||| ||||||||||||||  || ||||||||||    
T  27869348 ctcgctaattttgctttttctagtagtgtaata 27869380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 10917839 - 10917954
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| | |||||||| ||||||| | |||||||||||||||||||||| | |||  ||||||||||||||||||||||||||| |||||||||||||    
T  10917839 ttagtgaggaaaaacatgcaatccctctctaattccgtcactaaattttgcaatcaagaaatttatgaggaattttatgttttccgtcacaaatttccct 10917938  T
Q  216 ccctaattttgctttt 231  Q
    ||||||||||||||||    
T  10917939 ccctaattttgctttt 10917954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 37992097 - 37992227
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||||||||||| || | ||||||||||||||||||||||||| ||||||| | ||| | |||||||||||||||    
T  37992097 ttagtgaggaaaatttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaagaatatgtgaaggattttatgttttccg 37992196  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| ||||| ||||||||||||||||||||    
T  37992197 tcactaattttcctccctaattttgcttttc 37992227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 24576163 - 24576034
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| |||||| || ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  24576163 ttagtgagggatatttagcgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 24576064  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  24576063 tcactaatttccctcgctaattttgctttt 24576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 33652565 - 33652694
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||| | | ||| |||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  33652565 ttagtgagggatatttagtgagggaaaacatgaaatccttctctaactccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 33652664  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  33652665 tcactaatttccctcgctaattttgctttt 33652694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 4330976 - 4331105
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||| ||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  4330976 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 4331075  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  4331076 tcactaatttccctcgctaattttgctttt 4331105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 17810296 - 17810425
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  17810296 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 17810395  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| ||||||||||||||    
T  17810396 tcactaattttcctcgctaattttgctttt 17810425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 18010199 - 18010070
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  18010199 ttagtgagggatatttattgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 18010100  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| ||||||||||||||    
T  18010099 tcactaatttctctcgctaattttgctttt 18010070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 19240865 - 19240994
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19240865 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19240964  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  19240965 tcactaatttccctcgctaattttgctttt 19240994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 19314049 - 19314178
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19314049 ttagtgagggaaattttgtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19314148  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  19314149 tcactaatttccctcgctaattttgctttt 19314178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 27910903 - 27910774
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||||||||||||| ||| || |||||| |||||||||| || |||||||    
T  27910903 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccg 27910804  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  27910803 tcactaatttccctcgctaattttgctttt 27910774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 27957322 - 27957193
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||| ||| |||||||||||||||||| | ||||||||||||||||||||| ||| || |||||| |||||||||| || |||||||    
T  27957322 ttagtgagggatatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgactaaggaatttgtgaggaatttcattttttccg 27957223  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  27957222 tcactaatttccctcgctaattttgctttt 27957193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 145 - 241
Target Start/End: Original strand, 8789881 - 8789977
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||| || |||||    
T  8789881 taattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttcagtcacaaattttcctccctaattttgcttttcctagtagtg 8789977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 11938753 - 11938871
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  11938753 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-ttttccgtcactaattt 11938851  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  11938852 ccctcgctaattttgctttt 11938871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 19256220 - 19256339
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| ||||||||||||| ||||||| ||| |||||    
T  19256220 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttattttttccgtcactaattt 19256319  T
Q  212 ccctccctaattttgctttt 231  Q
    |||||  |||||||||||||    
T  19256320 ccctcgttaattttgctttt 19256339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 19488186 - 19488071
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||| ||||||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  19488186 ttagtgagggaaaatatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 19488087  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  19488086 cgctaattttgctttt 19488071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 32247921 - 32248036
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||||| ||| |||||||||    
T  32247921 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccgtcactaatttccct 32248020  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||||||||    
T  32248021 cgttaattttgctttt 32248036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 22939323 - 22939440
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||||    
T  22939323 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgacaaaggaatttgtgaggaatttcattttttccgtcactaatttcc 22939422  T
Q  214 ctccctaattttgctttt 231  Q
     || ||||||||||||||    
T  22939423 ttcactaattttgctttt 22939440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 24193335 - 24193206
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| |||| ||||||||||||||| || | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  24193335 ttagtgagagaaattttgtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 24193236  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  24193235 tcactaatttccctcgctaattttgctttt 24193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 43431698 - 43431569
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||| |||||||||||||||| ||||| |||||| |||||||||| || |||||||    
T  43431698 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcaaccaaggaatttgtgaggaatttcattttttccg 43431599  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  43431598 tcactaatttccctcactaatttttctttt 43431569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 6816522 - 6816383
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||| ||||||||||||| ||||| |||||| |||| |||||||| |||| |     
T  6816522 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgccactaaattttgcaaccaaggaatttgtgagaaattttatttttttca 6816423  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| |||||| |||||||| || |||||    
T  6816422 tcactaatttccctcgctaattatgcttttcctagtagtg 6816383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 13061056 - 13060941
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||||| |||||||||||||||||| || |||||| |||||||||| || ||||||| ||| ||||| |||    
T  13061056 ttagtgagggaaaacatgaaatccctctctaattctgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaatttacct 13060957  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  13060956 cgctaattttgctttt 13060941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 30467083 - 30466964
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | ||||| || | ||||||| ||||||||||||||||||||  ||||||||||||||||||  ||||||| ||| |||||    
T  30467083 aaatttagtgagggaaaacgtaaaatctctctctaattccatcactaaattttgcgaccaagaaatttatgaggaattttaatttttccgtcactaattt 30466984  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  30466983 ccctcgctaattttgctttt 30466964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 30687944 - 30688063
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||||||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||| | |||  ||||    
T  30687944 aaatttagtgaaggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcggtcactgattt 30688043  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  30688044 ccctcgctaattttgctttt 30688063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 21350476 - 21350605
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  21350476 ttagtgagggaaatttagtgaggaaaaacgtaaaatccatctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 21350575  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  || |||||||||||    
T  21350576 tcactaatttcccttgcttattttgctttt 21350605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 26399132 - 26399028
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| ||||  ||||||| ||||||| ||| |||||||||    
T  26399132 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaacgaatttgtgagagattttattttttccgtcactaatttccct 26399033  T
Q  216 cccta 220  Q
    |||||    
T  26399032 cccta 26399028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 29350921 - 29351051
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc-c 200  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||| |||||||||||||||||||||   ||||| |||||||||| || |||||      
T  29350921 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattgcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcta 29351020  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||| |||||||||| ||||||||||||||    
T  29351021 gtcactaatttccctcgctaattttgctttt 29351051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 16062078 - 16061949
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||  ||| | ||||| ||||||| || | |||||||||||||| |||||||||||| ||||||| |||||||||| || |||||||    
T  16062078 ttagtgagggaaattttttgaggaaaaacgtgaaatcactctctaattccgtcactacattttgcgaccatagaatttgtgaggaatttcattttttccg 16061979  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  16061978 tcactaatttccctcgctaattttactttt 16061949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 112 - 216
Target Start/End: Complemental strand, 5670298 - 5670194
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||  || ||||||| ||| |||||    
T  5670298 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattccattttttccgtcactaattt 5670199  T
Q  212 ccctc 216  Q
    |||||    
T  5670198 ccctc 5670194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 24636660 - 24636776
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || ||||||| ||| |||||    
T  24636660 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaattt 24636759  T
Q  212 ccctccctaattttgct 228  Q
    |||||  ||||||||||    
T  24636760 ccctcgttaattttgct 24636776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 25655980 - 25655868
Alignment:
Q  119 gtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccc 218  Q
    |||| ||||||| |||||||||| | ||||||  |||||||||||||||||||  |||||| |||||||||| || ||||||| ||| |||||||||| |    
T  25655980 gtgagggaaaacgtgaaatccctctctaattctatcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcactaatttccctcac 25655881  T
Q  219 taattttgctttt 231  Q
    |||||||||||||    
T  25655880 taattttgctttt 25655868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 32961657 - 32961797
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||  | |||| ||| | |||||||||||||||| |||||||||||  ||||| |||||||||| || ||||| |    
T  32961657 ttagtgagggaaatttagtgagggaaaatgtaaaattcctctctaattccgtcactaaactttgcgaccaagaaatttgtgaggaatttcattttttctg 32961756  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     |||  ||||||||| |||||||||||||| ||| ||||||    
T  32961757 tcactgatttccctcgctaattttgctttttttagtagtgt 32961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 243
Target Start/End: Complemental strand, 23752411 - 23752284
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | ||||| || | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| ||| |||||    
T  23752411 ttagtgagggaaaatgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatatccct 23752312  T
Q  216 ccctaattttgcttttcttaatagtgta 243  Q
    | ||||||||||||||  ||||||||||    
T  23752311 cgctaattttgctttttctaatagtgta 23752284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 9631401 - 9631531
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattcc-gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 200  Q
    |||| ||||||||||| |||||||||||| ||||||  || | ||||||| |||||||||||||||||  | ||||||| ||||||||||||| ||||||    
T  9631401 ttagcgagggaaattttgtgaaggaaaacgtgaaatttctctctaattcccgtcactaaattttgcgagtatagaatttgtgaggaattttattttttcc 9631500  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||| ||||| |||  ||||||||||||||    
T  9631501 gtcactaattttccttgctaattttgctttt 9631531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 4647894 - 4647765
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||||||| |   ||||| |||||||||| || |||||||    
T  4647894 ttagtgagagaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgactatgaaatttgtgaggaatttcattttttccg 4647795  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  4647794 tcactaatttccctcgctaattttgttttt 4647765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9915179 - 9915051
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||| | ||||||||||||||||| ||  |||||| |||||||||| || |||||||    
T  9915179 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatcctgtcactaaattttgcga-catggaatttgtgaggaatttcattttttccg 9915081  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| ||||||||||||||    
T  9915080 tcactaatttctctcgctaattttgctttt 9915051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 29345074 - 29345198
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||| ||||||||||   |||||||||||||||||||||| || ||  ||||| |||   ||||||| ||||||| |||     
T  29345074 gagggaaatttagagagggaaaacgtgaaatccctccctaattccgtcactaaattttgccactaagaaatttgtgaaagattttattttttccgtcact 29345173  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||||||||||||||| |||||    
T  29345174 aatttccctccctaatttttctttt 29345198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 25000560 - 25000441
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | | |||||| | |||||||||||| ||||| |||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  25000560 aaatttagtgagggaaaacgtaacatccctctctaattccgtcacaaaattctgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 25000461  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| |||||||| |||||    
T  25000460 ccctcactaattttactttt 25000441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 25273452 - 25273338
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||| |||||||||||||||||||||||||||| |||||| ||| || |||| || ||| |||||||||    
T  25273452 ttagtgagggaaaacgtaaaatccctctctaattctgtcactaaattttgcgaccaaagaatttgtgaggactttcat-tttttcgtcactaatttccct 25273354  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||||||||    
T  25273353 cgttaattttgctttt 25273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 40289559 - 40289437
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | ||||||||   |||||||||||||||||||||||||||| |||||| |||| || || || |||||||    
T  40289559 ttagtgagggaaatttagtgagggaaaacgtaaaatccctcc-taattccgtcactaaattttgcgaccaaggaatttgtgagaaaattcattttttccg 40289461  T
Q  202 acacaaatttccctccctaatttt 225  Q
     ||| ||||| |||| ||||||||    
T  40289460 tcactaattttcctcgctaatttt 40289437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 19493781 - 19493695
Alignment:
Q  116 ttagtgaaggaaaacatgaaa-tccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    ||||||| ||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  19493781 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 19493695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 6817052 - 6817181
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||  | ||||| || | ||||||||||||||||||||| ||||||  ||||| |||||||||| || |||||||    
T  6817052 ttagtgagggaaatttagtgagggaaaatgtaaaatctctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccg 6817151  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  |||| |||  ||||||||||||||    
T  6817152 tcactgattttccttgctaattttgctttt 6817181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 8824855 - 8824952
Alignment:
Q  134 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||| | ||||||||||||||||||||||||| || |||| | |||||||||| || ||||||  ||| |||||||||| ||||||||||||||    
T  8824855 aaatccctctctaattccgtcactaaattttgcgactaaggaatctgtgaggaatttgattttttccatcactaatttccctcgctaattttgctttt 8824952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 15251608 - 15251728
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    |||||||||  || ||||||| |||||||| | | |||||| |||||||||||||||||||||| |||   ||||  ||||||| ||||||| ||| |||    
T  15251608 ggaaatttaaagagggaaaacgtgaaatccttctctaattctgtcactaaattttgcgaccaaaaaatcg-tgagagattttattttttccgtcactaat 15251706  T
Q  210 ttccctccctaattttgctttt 231  Q
    ||||||||||||||||||||||    
T  15251707 ttccctccctaattttgctttt 15251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 123 - 231
Target Start/End: Complemental strand, 21219358 - 21219250
Alignment:
Q  123 aggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaat 222  Q
    ||||| || |||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||| || ||||||| ||| |||||| ||| || ||    
T  21219358 aggaatacgtgaaatccctctctaattccatcactaaattttgcgaccaaaaaatttatgagtaatttcattttttccgtcactaatttctctcgctgat 21219259  T
Q  223 tttgctttt 231  Q
    ||| |||||    
T  21219258 ttttctttt 21219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 5879202 - 5879301
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||| | |||| ||| | |||||||||||||||||||| |||||||  ||||| ||||||||||||| |||||||    
T  5879202 ttagtgagggaaatttagtgaggaaaaacgtaaaatgcctctctaattccgtcactaaattttacgaccaagaaatttgtgaggaattttattttttccg 5879301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 31344311 - 31344172
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || ||||||  |||||| ||| | ||||||||||| |||||||||||| |||  |||||||||| ||||| || ||||||     
T  31344311 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcattaaattttgcgatcaagaaatttatgagaaatttgattttttcca 31344212  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| ||||||| || |||||||| ||||||||| |||||    
T  31344211 tcactaatttccttctctaattttacttttcttagtagtg 31344172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 31399633 - 31399518
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||| | | |||||||||||||||||||||||||||  |||||| |||||||||| || |||| |  ||| |||||||||    
T  31399633 ttagtgagggaaaacgtgaaatccatctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcatttttttcatcactaatttccct 31399534  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||| ||||    
T  31399533 cgttaattttgttttt 31399518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 245
Target Start/End: Original strand, 17003310 - 17003403
Alignment:
Q  152 gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgtaat 245  Q
    |||| ||||||||| || ||| ||||||||||||  |||||| |||||| |||| ||||| |||||||||||||||||||  || |||||||||    
T  17003310 gtcattaaattttgtgatcaaggaatttatgaggggttttattttttcccacactaattttcctccctaattttgctttttctagtagtgtaat 17003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 231
Target Start/End: Original strand, 25274654 - 25274724
Alignment:
Q  161 ttttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||| ||||||||||||||    
T  25274654 ttttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttgctttt 25274724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 225
Target Start/End: Complemental strand, 33413095 - 33412992
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||      |||||| |||||||||| || |||||||  || |||||||||    
T  33413095 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcg------gaatttgtgaggaatttcattttttccgttactaatttccct 33413002  T
Q  216 ccctaatttt 225  Q
    | ||||||||    
T  33413001 cgctaatttt 33412992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 232
Target Start/End: Complemental strand, 2265474 - 2265388
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttc 232  Q
    |||||| |||||||||||||| || |||||||||| ||| | ||||||| ||||||| ||| ||||| | ||||||||||| ||||||    
T  2265474 taattctgtcactaaattttgtgatcaaagaatttgtgaaggattttattttttccgtcactaattt-cgtccctaattttacttttc 2265388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 6084340 - 6084256
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||||||||||||||  |||||| ||||||  |||  ||||||| ||||||| ||| |||||  ||||||||||||||||||    
T  6084340 taattccgtcactaaatttttagaccaaggaatttgggag--attttattttttccgtcactaatttatctccctaattttgctttt 6084256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 41527825 - 41527730
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| ||||||||||| ||   |||||  || |||||||||||||| ||| |||||||||||| ||||||| ||||||| ||| |||||    
T  41527825 ttagtgagggataacatgaaatctctccctaattatgttactaaattttgcgatcaaggaatttatgagggattttattttttccgtcactaattt 41527730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 231
Target Start/End: Complemental strand, 42700743 - 42700667
Alignment:
Q  155 actaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||||||||| || |||||| |||||||||| || ||||||| |||  |||| |||| |||||||| |||||    
T  42700743 actaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactgattttcctcgctaattttactttt 42700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 198
Target Start/End: Complemental strand, 3692310 - 3692214
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 198  Q
    |||| ||||||||||||  || | ||||| | |||||| | | ||||||| | ||||||||||  ||| ||||||||| ||||||||||||| ||||    
T  3692310 ttagtgagggaaatttatagaggtaaaacgtaaaatccttctctaattccattactaaattttatgactaaagaatttgtgaggaattttatttttt 3692214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 15289683 - 15289731
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 193  Q
    ||||||| |||||||||||| |||||||||||||| ||||  |||||||    
T  15289683 taattccatcactaaattttacgaccaaagaatttgtgagagattttat 15289731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 15470052 - 15470100
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 193  Q
    ||||||| |||||||||||| |||||||||||||| ||||  |||||||    
T  15470052 taattccatcactaaattttacgaccaaagaatttgtgagagattttat 15470100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 22083838 - 22083978
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||    
T  22083838 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcacaaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 22083937  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     |||||||||||||||||||||||||||||| || ||||||    
T  22083938 tcacaaatttccctccctaattttgcttttcctagtagtgt 22083978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 12951708 - 12951847
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| ||||||||||||||||    
T  12951708 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgagaaattttatgttttccg 12951807  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     |||||||||||||| ||||||||||||||| || |||||    
T  12951808 tcacaaatttccctctctaattttgcttttcctagtagtg 12951847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 18033664 - 18033526
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| ||| ||||||    
T  18033664 ttagtgagggaaatttaatgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttaatg-tttccg 18033566  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     |||||||||||||||||||||||||||||| || |||||    
T  18033565 tcacaaatttccctccctaattttgcttttcctagtagtg 18033526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 11530225 - 11530366
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||||||||||||| | | |||||||||||||||||||| |||  ||  |||||||||| ||||||||||||||||    
T  11530225 ttagtgaggaaaatttagtgagggaaaacatgaaatccatctctaattccgtcactaaattttacgattaagaaatttatgagaaattttatgttttccg 11530324  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgta 243  Q
     |||||||||||||||||||||||||||||| ||||||||||    
T  11530325 tcacaaatttccctccctaattttgcttttcctaatagtgta 11530366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 247
Target Start/End: Original strand, 28364911 - 28365056
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  28364911 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 28365010  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaataa 247  Q
     ||| |||||||||| ||||||||||||||  || |||||||||||    
T  28365011 tcactaatttccctcgctaattttgctttttctagtagtgtaataa 28365056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 11077663 - 11077778
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  11077663 ttagtgagggaaaacatgaaatccctctctaataccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 11077762  T
Q  216 ccctaattttgctttt 231  Q
    |||||||||| |||||    
T  11077763 ccctaatttttctttt 11077778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 9892963 - 9893092
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  9892963 ttagtgagggaaatttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9893062  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  9893063 tcactaatttccctcgctaattttgctttt 9893092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 22579488 - 22579348
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||    
T  22579488 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatagaatttgtgaggaatttcattttttccg 22579389  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  22579388 tcactaatttccctcgctaattttgctttttctaatagtgt 22579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 2992615 - 2992754
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||     
T  2992615 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttcca 2992714  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| |||||| |||||||| || |||||    
T  2992715 tcactaatttccctcgctaattatgcttttcctagtagtg 2992754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 14872133 - 14872249
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  14872133 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttggaaccaaggaatttgtgaggaattttatgttttccgtcacaaatttccct 14872232  T
Q  216 ccctaattttgcttttc 232  Q
    | |||||||| ||||||    
T  14872233 ctctaatttttcttttc 14872249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 243
Target Start/End: Original strand, 6978279 - 6978418
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| |||||||||  ||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6978279 ttagtgagggatatttagtga--gaaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6978376  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgta 243  Q
      || |||||||||| ||||||||||||||| ||||||||||    
T  6978377 taactaatttccctcgctaattttgcttttcctaatagtgta 6978418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 6598464 - 6598593
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  6598464 ttagtgagggatatttagtgagggaaaacttgaaatccctctctaattccgtcactaaattttgcgaccaagtaatttgtgaggaatttcattttttccg 6598563  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  6598564 tcactaatttccctcgctaattttgctttt 6598593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 15364597 - 15364468
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  15364597 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 15364498  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  15364497 tcactaatttccctcactaattttgctttt 15364468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 24661148 - 24661019
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||||||||| || | ||||||||||| |||||||||||||||| |||||| |||||||||| || |||||||    
T  24661148 ttagtgagggatatttagtgagggaaaacatgaaatctctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 24661049  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  24661048 tcactaatttccctcgctaattttgctttt 24661019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 25398002 - 25398131
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  25398002 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 25398101  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  25398102 tcactaatttccctcgctaatttttctttt 25398131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 26224428 - 26224557
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||||  ||||| |||||||||| || |||||||    
T  26224428 ttagcgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaagaaatttgtgaggaatttcattttttccg 26224527  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  26224528 tcactaatttccctcgctaattttgctttt 26224557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 495766 - 495637
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  495766 ttagtgagggaaatttagtgagggaaaacgtaaaatcactctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 495667  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  495666 tcactaatttcccttgctaattttgctttt 495637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12200694 - 12200823
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||| ||||||||||| | ||||||| |||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  12200694 ttagtgagggatatttagtgagggaaaatatgaaatccctctctaattccctcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 12200793  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  12200794 tcactaatttccctcactaattttgctttt 12200823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 223
Target Start/End: Original strand, 12845003 - 12845124
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||||| || ||||||| ||||||| || | ||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||    
T  12845003 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccaaagaatttgtgagcaattttattttttccg 12845102  T
Q  202 acacaaatttccctccctaatt 223  Q
     ||| |||||||||||||||||    
T  12845103 tcactaatttccctccctaatt 12845124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 14886561 - 14886690
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||||| |||||||| | |||||||||||||||||||| |||||||||||| | ||||| ||||||| ||||| |    
T  14886561 ttagtgaggaaaatttagtgagggaaaacatcaaatccctctctaattccgtcactaaattttacgaccaaagaatatgtgagggattttattttttctg 14886660  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||||||||||||||||||    
T  14886661 tcactaattttcctccctaattttgctttt 14886690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 14772690 - 14772800
Alignment:
Q  131 atgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttt 230  Q
    |||||||| || | |||||||||||||||||||| ||||||| |||||| |||||||||||||||||| || |||||||||| |||||||||||||||||    
T  14772690 atgaaatctctctctaattccgtcactaaattttacgaccaaggaatttgtgaggaattttatgtttttcgtcacaaatttctctccctaattttgcttt 14772789  T
Q  231 tcttaatagtg 241  Q
    |  ||||||||    
T  14772790 ttctaatagtg 14772800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 1939381 - 1939252
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||| |||||  ||||||||||||||||| | ||||||||||| ||||||||||||||||| ||||| |||||||||| || ||||| |    
T  1939381 ttagtgagggatattcagtgagagaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaaaaatttgtgaggaatttcattttttcgg 1939282  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  1939281 tcactaatttccctcgctaattttgctttt 1939252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 11049878 - 11049761
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  11049878 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 11049779  T
Q  214 ctccctaattttgctttt 231  Q
    ||  ||||||||| ||||    
T  11049778 cttgctaattttgttttt 11049761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 27796973 - 27796844
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||| | ||| ||||||||||| ||| | || |||| ||    
T  27796973 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaatcaaggaatttatgagaaatatcatttttttcg 27796874  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  27796873 tcactaatttccctcgctaattttgctttt 27796844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 5360431 - 5360538
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 223  Q
    ||||||| | ||||| || | ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||| |||||||||| ||||||    
T  5360431 ggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaaaaatttgtgaggaattttattttttccgtcactaatttccctcgctaatt 5360530  T
Q  224 ttgctttt 231  Q
    ||||||||    
T  5360531 ttgctttt 5360538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 18048788 - 18048927
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | ||||||||||||||||   ||||||  |||||||||||||||||||| |||||| |||| |||||||| |||||||    
T  18048788 ttagtgagggaaatttagtgaggaaaaacatgaaatccctccctaattctctcactaaattttgcgaccaacgaatttgtgagaaattttattttttccg 18048887  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| ||||| |||| ||||||||| ||||| || |||||    
T  18048888 tcactaattttcctctctaattttgtttttcctagtagtg 18048927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 217
Target Start/End: Original strand, 23281786 - 23281901
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||||||||| | ||||| ||||||||||||| ||||||     
T  23281786 ttagggagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttcca 23281885  T
Q  202 acacaaatttccctcc 217  Q
     ||| |||||||||||    
T  23281886 tcactaatttccctcc 23281901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 21140939 - 21141068
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   |||||  ||||||||| || |||||||    
T  21140939 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgggaggaatttcattttttccg 21141038  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  21141039 tcactaatttccctcgttaattttgctttt 21141068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 33250835 - 33250723
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| |||||||||||||| ||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||    
T  33250835 atttagtgagggaaaacatgaaattcctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttcc 33250736  T
Q  214 ctccctaattttg 226  Q
    |||  ||||||||    
T  33250735 ctcgttaattttg 33250723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 5192314 - 5192199
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||| |||||||||||||| |||||||||| || ||||||  ||| ||||| |||    
T  5192314 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttacgaccaaagaatttgtgaggaatttcattttttccttcactaattttcct 5192215  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  5192214 cgctaattttgctttt 5192199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 6605621 - 6605506
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||||||||| || | |||||||||||||| |||||||||| ||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  6605621 ttagtgagggaaaacatgaaatctctctctaattccgtcactatattttgcgactaagaaatttgtgaggaatttcattttttccgtcactaatttccct 6605522  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  6605521 cgctaattttgctttt 6605506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 9885253 - 9885372
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| |||||||||||||||||| | |||||  ||||||||||||||| |||||  ||||| ||||  ||||||| ||||||| ||| |||||    
T  9885253 aaatttagtgagggaaaacatgaaatccctctttaattttgtcactaaattttgcaaccaacaaatttgtgagagattttattttttccgtcactaattt 9885352  T
Q  212 ccctccctaattttgctttt 231  Q
    |||||||| |||||||||||    
T  9885353 ccctccctgattttgctttt 9885372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 15448395 - 15448514
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||| ||||||||||||  || |||||| |||||||||| || ||||||| ||| |||||    
T  15448395 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgattaaggaatttgtgaggaatttcattttttccgtcactaattt 15448494  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  15448495 ccctcgctaattttgctttt 15448514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 2669309 - 2669438
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||  | ||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||| ||    
T  2669309 ttagtgagggaaatttagtgtggaaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 2669408  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  2669409 tcactaatttccctcgttaattttgctttt 2669438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 223
Target Start/End: Complemental strand, 12351725 - 12351604
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| ||||||  || | ||||||||||| ||||||||||||| || |||||| ||||||||||||| |||||||    
T  12351725 ttagtgagggaaatttagagagggaaaacgtgaaatttctctctaattccgtcattaaattttgcgactaaggaatttgtgaggaattttattttttccg 12351626  T
Q  202 acacaaatttccctccctaatt 223  Q
     ||| ||||||||||| |||||    
T  12351625 tcactaatttccctccttaatt 12351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 20182145 - 20182274
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  20182145 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 20182244  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  20182245 tcactaatttccctcgctaattttactttt 20182274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 21990313 - 21990185
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | ||||||||||||||| ||||||||||||  ||||| |||||||||| || |||||||    
T  21990313 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaatttttgcgaccaagaaatttgtgaggaatttcat-ttttccg 21990215  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  |||||||||| ||||||||||||||    
T  21990214 tcattaatttccctcgctaattttgctttt 21990185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 22153846 - 22153717
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  22153846 ttagtgaggcaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 22153747  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  22153746 tcactaatttccctcgctaattttactttt 22153717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 26939599 - 26939716
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||  | ||| |||||||    
T  26939599 atttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttttgtcactaatttcc 26939698  T
Q  214 ctccctaattttgctttt 231  Q
    |||  ||||||| |||||    
T  26939699 ctcagtaattttactttt 26939716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 30834091 - 30833970
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| ||| ||| | |||||||| | |||||| |||| ||||||||||||||||| ||||  |||||||||| || ||||||| ||| |||    
T  30834091 ggaaatttagtgagggagaacgtaaaatccctctctaattctgtcattaaattttgcgaccaaaaaattagtgaggaatttcattttttccgtcactaat 30833992  T
Q  210 ttccctccctaattttgctttt 231  Q
    ||||||| ||||||||||||||    
T  30833991 ttccctcgctaattttgctttt 30833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 1954895 - 1955010
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    |||||||||||||||||||||||| | ||||||||| |||| |||||||| ||||||  ||||| ||| ||||||||| ||||||| |||  ||||||||    
T  1954895 ttagtgaaggaaaacatgaaatcc-tctataattccatcacaaaattttgtgaccaagaaatttgtgacgaattttattttttccgtcactcatttccct 1954993  T
Q  216 ccctaattttgcttttc 232  Q
     ||||||||||||||||    
T  1954994 tcctaattttgcttttc 1955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 6065451 - 6065579
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||| ||||| ||| | |||||  |||| |||||||||||| |||||||||| ||||  ||||||| ||||||| ||  ||||| |||    
T  6065451 ttagtgagggaaaacaagaaattcctctctaattttgtcattaaattttgcgatcaaagaatttgtgagagattttattttttccgtcattaattttcct 6065550  T
Q  216 ccctaattttgcttttcttaatagtgtaa 244  Q
    ||||||||||||||||| |||||||||||    
T  6065551 ccctaattttgcttttcctaatagtgtaa 6065579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 12499230 - 12499345
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12499230 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12499329  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||| ||||    
T  12499330 cgctaattttgttttt 12499345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 12506559 - 12506674
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12506559 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12506658  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||| ||||    
T  12506659 cgctaattttgttttt 12506674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 12509671 - 12509556
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||| ||||||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| | |||||||    
T  12509671 ttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactactttccct 12509572  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||| ||||    
T  12509571 cgctaattttgttttt 12509556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 27705422 - 27705521
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  27705422 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 27705521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 22055751 - 22055621
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| |||||||| | |||||||||||||||| | ||||||| ||| | ||||||| |||||| |||||| ||||||||||||| ||||| |    
T  22055751 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 22055652  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||  |||||||||| ||||||||| |||||    
T  22055651 tcattaatttccctctctaattttgtttttc 22055621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 28668132 - 28668229
Alignment:
Q  134 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||| ||||||||||| |||||||||||| ||| |||||| ||||||||||||| ||||||| |||  ||||||||| |||||||| |||||    
T  28668132 aaatccctttctaattccgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactgatttccctcgctaattttactttt 28668229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 33547560 - 33547645
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    ||||||| |||||||||||||||||| | |||||  |||||||||||||||||||||||||||| ||||| ||||||| |||||||    
T  33547560 ttagtgagggaaaacatgaaatccctatctaattttgtcactaaattttgcgaccaaagaatttgtgagggattttattttttccg 33547645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 21691635 - 21691495
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || | ||||| |||||||||| | ||||| ||||||||||||||||||||||||||||| |||| |||||||| |||| |     
T  21691635 ttagtgagggaattttagagaggaaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatttgtgagaaattttatttttttca 21691536  T
Q  202 acac-aaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| || |||||||| |||||||| ||||| ||| |||||    
T  21691535 tcactaattttccctctctaattttactttttttagtagtg 21691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 232
Target Start/End: Original strand, 11350196 - 11350309
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||| ||||| || | |||||| |||||||||||||||||  || |||||| |||    |||| ||||||||| |||||||||||||    
T  11350196 ttagtgagggaaaacataaaatcgctctctaattctgtcactaaattttgcgattaaggaatttgtgat---ttttttgttttccgtcacaaatttccct 11350292  T
Q  216 ccctaattttgcttttc 232  Q
    |||||||||||||||||    
T  11350293 ccctaattttgcttttc 11350309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 9060099 - 9060219
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    |||||||||| || ||||| ||||||||  || | |||||| |||||||||||||||||||||| ||||| ||||| ||||||| ||||||| ||| |||    
T  9060099 ggaaatttagcgagggaaa-catgaaatttctctctaattctgtcactaaattttgcgaccaaaaaatttgtgagggattttattttttccgtcactaat 9060197  T
Q  210 ttccctccctaattttgctttt 231  Q
    ||| |||  |||||||||||||    
T  9060198 ttcgctctttaattttgctttt 9060219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 12160973 - 12160857
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| ||||||||| |||||||| | ||||| |||||||||||||| ||| |||| ||||| |||||||||| || |||| || ||| |||||||    
T  12160973 atttagtgagggaaaacataaaatccctctctaatttcgtcactaaatttt-cgatcaaaaaatttgtgaggaatttcattttttacgtcactaatttcc 12160875  T
Q  214 ctccctaattttgctttt 231  Q
    ||| |||||||| |||||    
T  12160874 ctcgctaattttactttt 12160857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 16250941 - 16250812
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| |||| ||||||| ||||||| || | |||||| ||||||||||||||||| ||   ||||| |||||||||| || |||||||    
T  16250941 ttagtgagagaaattttgtgagggaaaacgtgaaatctctctctaattctgtcactaaattttgcgatcatgaaatttgtgaggaatttcattttttccg 16250842  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  16250841 tcactaatttccctcgttaattttgctttt 16250812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 18492369 - 18492498
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| || | ||||||| |||||||||  | |||||||||||||||||||||||||||  |||||| |||| ||||| || |||||||    
T  18492369 ttagtgagagaaattttgtaagggaaaacgtgaaatcccactctaattccgtcactaaattttgcgaccatggaatttgtgagaaatttcattttttccg 18492468  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| | || ||||||||||||||    
T  18492469 tcactaatttgcatcgctaattttgctttt 18492498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 200
Target Start/End: Original strand, 13145016 - 13145100
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 200  Q
    ||||||| ||||||| ||||||| || | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||    
T  13145016 ttagtgagggaaaacgtgaaatctctctttaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttcc 13145100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 15509186 - 15509285
Alignment:
Q  132 tgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||| | |||||||||||||||||||| ||||||   ||||| |||||||||| || ||||||| ||| |||||||||| |||||||| |||||    
T  15509186 tgaaatccctctctaattccgtcactaaattttccgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccctcgctaatttttctttt 15509285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 20692936 - 20692821
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||| ||||||||||||||||||||||| || |||| | ||||||||| ||||||| ||| ||||| |||    
T  20692936 ttagtgagggaaaacgtaaaatccctctctaatttcgtcactaaattttgcgaccaaaaaacttataaagaattttattttttccgtcactaattttcct 20692837  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||| ||||    
T  20692836 cgttaattttgttttt 20692821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 12157472 - 12157386
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||||||||||||||  ||||||||| ||| | ||| ||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  12157472 taattccgtcactaaattttatgaccaaagattttgtaagggattttattttttccgtcactaatttccctccttaattttgctttt 12157386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 343702 - 343593
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||| ||| ||||||| | |||||||| | |||||| ||||||||| |||||||||||| ||||| |||||||||| || |||| ||    
T  343702 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattctgtcactaaaatttgcgaccaaaaaatttgtgaggaatttcattttttacg 343603  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  343602 tcactaattt 343593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 12680323 - 12680195
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||||| || ||||||| |||||| ||| | ||||||||||| |||||||| ||| |||||||||  |||| |||||||| |||||||    
T  12680323 ttagtgaggaaaatttagagagggaaaacgtgaaattcctctctaattccgtcattaaattttacgatcaaagaattcgtgagcaattttattttttccg 12680224  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| ||||| ||||||| |||||    
T  12680223 tcactaattt-cctccttaatttttctttt 12680195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 17919568 - 17919665
Alignment:
Q  134 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||| | |||||||||||||||||||||||||||| |||||||||| |||||| || ||||||| ||   ||||| ||| ||||||||| ||||    
T  17919568 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgatgaatttcattttttccgtcattgatttctctcgctaattttgttttt 17919665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 12205302 - 12205195
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 223  Q
    ||||||| ||||||||||   |||||||||||||||||||| |||   |||||||| |||| ||||| |||||||||| ||| |||||| || |||||||    
T  12205302 ggaaaacgtgaaatccctcactaattccgtcactaaattttacgatttaagaatttgtgagaaatttaatgttttccgtcactaatttctcttcctaatt 12205203  T
Q  224 ttgctttt 231  Q
    || |||||    
T  12205202 ttactttt 12205195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 15961532 - 15961417
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||| ||| | ||||||||| |||||||||||||| |||  ||||| | |||||||| || ||||||| ||| |||||||||    
T  15961532 ttagtgagggaaaacgtaaaattcctctctaattccgttactaaattttgcgatcaagaaatttgtaaggaatttcattttttccgtcactaatttccct 15961433  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||||||||    
T  15961432 cgttaattttgctttt 15961417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 10458807 - 10458893
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||| |||||||||||||| ||||| |||||| ||||||| || || ||||||| ||| |||||||||| |||||||| |||||    
T  10458807 taattccatcactaaattttgcaaccaaggaatttgtgaggaaattcattttttccgtcactaatttccctcactaattttactttt 10458893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 190
Target Start/End: Original strand, 14036620 - 14036708
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||| |||| |||||||||||| ||  |||||| ||||||||||    
T  14036620 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcattaaattttgcgatcatggaatttgtgaggaattt 14036708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 19175915 - 19175828
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    ||||||||||||||| ||||| ||||||  | |||| ||| | ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  19175915 ttagagagggaaatt-agtgagggaaaatgtaaaattcctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattt 19175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 11431779 - 11431638
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta--tgttttc 199  Q
    |||| ||||||||||||| || | |||||  || |||||| | |||||||||||||||||||||| |  ||||||||| ||||  ||||||  | |||||    
T  11431779 ttagtgagggaaatttagagaggaaaaacgcgatatccctctttaattccgtcactaaattttgc-aataaagaatttgtgagagattttattttttttc 11431681  T
Q  200 cgacacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
    || ||| |||||  |||||||||||| ||||||||| ||||||    
T  11431680 cgtcactaatttttctccctaattttacttttcttagtagtgt 11431638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 243
Target Start/End: Original strand, 16118156 - 16118287
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| ||| ||||||||||| || | ||||| ||||| |||||||||||| | | |||||| | ||  ||||||  ||||||| ||| |||||    
T  16118156 aaatttaatgagggagaacatgaaatctctctctaatttcgtcattaaattttgcgatcgaggaatttgtaagagattttagtttttccgtcactaattt 16118255  T
Q  212 ccctccctaattttgcttttcttaatagtgta 243  Q
    || ||||||||||| | |||| ||||||||||    
T  16118256 ccgtccctaattttacctttcctaatagtgta 16118287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 28221647 - 28221730
Alignment:
Q  157 taaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagt 240  Q
    |||| ||||||| |||| |||||||||| |||||||| ||||||  ||| ||||||||||||| |||||| ||||| |||||||    
T  28221647 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 28221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 231
Target Start/End: Original strand, 5250195 - 5250268
Alignment:
Q  158 aaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||||||||  |||||||||||||||| || ||||||| ||| |||||||||| || ||||| |||||    
T  5250195 aaattttgcgaccaagaaatttatgaggaatttcattttttccgtcactaatttccctcgctgatttttctttt 5250268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 124 - 232
Target Start/End: Complemental strand, 10929614 - 10929505
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatga-ggaattttatgttttccgacacaaatttccctccctaat 222  Q
    ||||||||||||||| || | | ||||||||| ||||||||||||| || |||||| ||| || |||| || ||||||| ||| ||||| | ||||||||    
T  10929614 ggaaaacatgaaatctctctttgattccgtcattaaattttgcgacaaaggaatttgtgaggggatttaattttttccgtcactaattttcttccctaat 10929515  T
Q  223 tttgcttttc 232  Q
    |||| |||||    
T  10929514 tttgattttc 10929505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 5270392 - 5270502
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga-ccaaagaatttatgaggaattttatgttttcc 200  Q
    |||| ||||||| ||||| || ||||||  |||||| ||| | |||||||||||||||||||| ||| | ||| ||||| |||| |||||||| ||||||    
T  5270392 ttagtgagggaattttagagagggaaaatgtgaaattcctctctaattccgtcactaaattttacgatcaaaaaaatttgtgagaaattttattttttcc 5270491  T
Q  201 gacacaaattt 211  Q
      |||||||||    
T  5270492 atcacaaattt 5270502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 3673229 - 3673184
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||    
T  3673229 taattccgtcactaaattttacgaccaaaaaatttgtgaggaattt 3673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 2396249 - 2396313
Alignment:
Q  148 ttccgtcactaaattttgcgaccaaagaatttatgaggaa-ttttatgttttccgacacaaattt 211  Q
    |||||||| |||||||| | |||||||||||||||||||| |||||| ||||||| ||| |||||    
T  2396249 ttccgtcattaaattttacaaccaaagaatttatgaggaatttttattttttccgtcactaattt 2396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 9878596 - 9878525
Alignment:
Q  159 aattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||| |||||||||||||| | ||| ||||||| ||||||  ||| || |||||||| |||||||||||||    
T  9878596 aattttacgaccaaagaatttgttagggattttat-ttttccatcactaaattccctccataattttgctttt 9878525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 58582 - 58721
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  58582 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttttgaggaattttatgttttccg 58681  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     |||||||||||||||||||||||||||||| || |||||    
T  58682 tcacaaatttccctccctaattttgcttttcctagtagtg 58721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 30783334 - 30783473
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  30783334 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaatgaatttgtgaggaattttatgttttccg 30783433  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||||||| |||||||||||||||| || |||||    
T  30783434 tcacaaatttcccttcctaattttgcttttcctagtagtg 30783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 41637614 - 41637743
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41637614 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 41637713  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||||||||||||||||||||||||||||    
T  41637714 tcacaaatttccctccctaattttgctttt 41637743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 27327617 - 27327752
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| | || |||||| ||||||||||||||||||||| ||||    
T  27327617 gagggaaatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgtctaaggaatttgtgaggaattttatgttttccgtcaca 27327716  T
Q  207 aatttccctccctaattttgcttttcttaatagtgt 242  Q
    ||||||| |||||||||||||||||| || ||||||    
T  27327717 aatttccatccctaattttgcttttcctagtagtgt 27327752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 31266350 - 31266489
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  31266350 ttagtgagggaaatttagcgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 31266449  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
      | |||||||||||||||||||| |||||| || |||||    
T  31266450 taaaaaatttccctccctaattttacttttcctagtagtg 31266489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 29749542 - 29749413
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  29749542 ttagtgaggaaaatttagtgagggaaaacatgaaatccctccctaattccgtcactaaattttgcgaccaagaaatttgtgaggaattttatgttttccg 29749443  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||||||||||||| |||||||||||||||    
T  29749442 tcacaaatttcccttcctaattttgctttt 29749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 28841481 - 28841341
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  28841481 ttagtgagggatatttagtgtgggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 28841382  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
      || |||||||||| ||||||||||||||| || ||||||    
T  28841381 ttactaatttccctcgctaattttgcttttcctagtagtgt 28841341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 32300447 - 32300576
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  32300447 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 32300546  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  32300547 tcactaatttccctcgctaattttgctttt 32300576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 28319713 - 28319589
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||| |||     
T  28319713 gagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28319614  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| ||||||||||||||    
T  28319613 aatttccctcactaattttgctttt 28319589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 22140503 - 22140374
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| ||||| |||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  22140503 ttagtgagggaaattttgtgaaagaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 22140404  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  22140403 tcactaatttccctcgttaattttgctttt 22140374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 18551392 - 18551253
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||||| |||||||| | ||||||||||||||||||||||||  || |||||| |||||||||| || |||||||    
T  18551392 ttagtgagggatatttagtgagggaaaacataaaatccctctctaattccgtcactaaattttgcgattaaggaatttgtgaggaatttcattttttccg 18551293  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| ||||| |||| |||||||||||||| ||| |||||    
T  18551292 tcactaattttcctcgctaattttgctttttttagtagtg 18551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 37552233 - 37552352
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||  | |||||||| | ||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||| ||| |||||    
T  37552233 aaatttagtgagggaaaatgtaaaatccctctctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaattt 37552332  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  37552333 ccctcgctaattttgctttt 37552352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 1141532 - 1141661
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  1141532 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattctgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 1141631  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  1141632 tcactaatttccctcgctaattttgctttt 1141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 15636874 - 15636745
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||| |||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  15636874 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaatttcgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 15636775  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  15636774 tcactaatttccctcgctaattttgctttt 15636745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 235
Target Start/End: Complemental strand, 18916539 - 18916407
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||||| || |||||||||||||||||| | |||||| ||||||||||||||||| |||| ||||| ||||| ||||||| |||||||    
T  18916539 ttagtgagagaaatttagggagggaaaacatgaaatccctctctaattcagtcactaaattttgcgatcaaaaaatttgtgagggattttat-ttttccg 18916441  T
Q  202 acacaaatttccctccctaattttgcttttctta 235  Q
     ||  ||||||||| |||||||||||||||||||    
T  18916440 tcagtaatttccctgcctaattttgcttttctta 18916407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 37724131 - 37724002
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| |||||||||||| ||||||| ||||||||||   |||| |||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  37724131 ttagtgagagaaatttagtgagggaaaacgtgaaatccctcgctaataccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 37724032  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| || ||||| |||||    
T  37724031 tcactaatttccctcgctgatttttctttt 37724002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 12779606 - 12779725
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||| ||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  12779606 aaatttagtgagggaaaacgtaaaattcctctctaatttcgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccgtcactaattt 12779705  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  12779706 ccctcgctaattttgctttt 12779725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 13613226 - 13613103
Alignment:
Q  108 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 207  Q
    |||||| |||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||| || ||| |    
T  13613226 agggaagtttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcatttttttcgtcacta 13613127  T
Q  208 atttccctccctaattttgctttt 231  Q
    |||| |||| |||||||| |||||    
T  13613126 attttcctcgctaatttttctttt 13613103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 43408636 - 43408521
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||    
T  43408636 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccct 43408537  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  43408536 cactaattttgctttt 43408521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 44476500 - 44476385
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||||||||||| | ||||| || | |||||||||||||||||||||||||||| |||||| ||| |||||| || ||||||| ||| |||||||||    
T  44476500 ttagtgaaggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaaggaatttgtgaagaatttcattttttccgtcactaatttccct 44476401  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  44476400 cgctaattttgctttt 44476385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 13788194 - 13788052
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||  | |||||||| | ||||| |||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  13788194 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 13788095  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     |||  ||||||||| ||||||||||||||  || ||||||||    
T  13788094 tcactgatttccctcgctaattttgctttttctagtagtgtaa 13788052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 32008948 - 32009078
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||||||||| ||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| | | ||||||    
T  32008948 ttagtgagggaaatttaatgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcc 32009047  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||| ||||| |||| ||||||||||||||    
T  32009048 gtcactaattttcctcgctaattttgctttt 32009078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 8430292 - 8430421
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||| || | ||||| ||||||||||||| |||||||    
T  8430292 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgatcataaaatttgtgaggaattttattttttccg 8430391  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||| | ||||||||| ||||    
T  8430392 tcactaatttcccccgctaattttgttttt 8430421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 20065213 - 20065084
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| | ||||| |||||||||| | |||||| ||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  20065213 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattcagtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 20065114  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  20065113 tcactaatttccctcgctaattttgctttt 20065084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 23388517 - 23388388
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||| |||||| || |||||||    
T  23388517 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaagaatttcattttttccg 23388418  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  23388417 tcaccaatttccctcgctaattttgttttt 23388388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 230
Target Start/End: Complemental strand, 26687830 - 26687701
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| ||| |||||||||||| |||||||||||||||| | | |||||||||||||||||||||| ||||| |||||| |||| ||||||| | ||||||    
T  26687830 ttagtgagcgaaatttagtgacggaaaacatgaaatccatctctaattccgtcactaaattttgcaaccaaggaatttgtgagaaattttatttttttcc 26687731  T
Q  201 gacacaaatttccctccctaattttgcttt 230  Q
    | ||  ||||||||||| ||||||||||||    
T  26687730 gtcattaatttccctccttaattttgcttt 26687701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 41736168 - 41736297
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||  | |||||||| | ||||| |||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  41736168 ttagtgaggaaaatttagtgagggaaaatgtaaaatccctctctaatttcgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 41736267  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  41736268 tcactaatttccctcgctaattttgctttt 41736297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 7093578 - 7093693
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||  |||||||||||||||||||||| ||||| |||||||||| || ||||||| ||| |||||||||    
T  7093578 ttagtgagggaaaacgtaaaatccctctctaattttgtcactaaattttgcgaccaaaaaatttgtgaggaatttcattttttccgtcactaatttccct 7093677  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  7093678 cgctaattttgctttt 7093693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 36550844 - 36550973
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||| | ||||| ||||||  ||| |||||||    
T  36550844 atttagtgagggaaaacatgaaatccctctataattccatcactaaattttgcgaccaaataacttgtgaggga-tttattttttccatcactaatttcc 36550942  T
Q  214 ctccctaattttgcttttcttaatagtgtaa 244  Q
    ||| ||||||||| ||||  || ||||||||    
T  36550943 ctctctaattttgttttttctagtagtgtaa 36550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 14757248 - 14757131
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| ||||||||||||||| || | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||  ||||| |    
T  14757248 atttagtgagggaaaacatgaaatctctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcattaattttc 14757149  T
Q  214 ctccctaattttgctttt 231  Q
     || ||||||||||||||    
T  14757148 ttcgctaattttgctttt 14757131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 21293850 - 21293721
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||| ||||||  |||||| |||| ||||| || |||||||    
T  21293850 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttacgaccatggaatttgtgagaaatttcattttttccg 21293751  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  21293750 tcactaatttccctcgctaattttgttttt 21293721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 32185828 - 32185957
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||| ||||||   |||||  ||||||||| || |||||||    
T  32185828 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttacgaccatgaaatttgcgaggaatttcattttttccg 32185927  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  32185928 tcactaatttccctcgctaattttgttttt 32185957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 44722933 - 44723057
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||| |||||||||  ||||| ||||||||||| | ||||||||||||||||||||||||| || |||||| | |||||||| || ||||||  ||      
T  44722933 gagggatatttagtgagagaaaatatgaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtaaggaatttcattttttccatcatt 44723032  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| ||||||||||||||    
T  44723033 aatttccctcgctaattttgctttt 44723057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 23858086 - 23857968
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||  | | |||||||||||||||||||||||||||| |||||| |||||||||| || ||| ||| ||| |||||    
T  23858086 aaatttagtgagggaaaacgtaaaatcattctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcat-tttcccgtcactaattt 23857988  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  23857987 ccctcgctaattttgctttt 23857968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 181
Target Start/End: Original strand, 27523007 - 27523086
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttat 181  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||    
T  27523007 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttat 27523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 35697475 - 35697573
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattt 224  Q
    |||||||||||| ||| | ||||||||||||||||||||||||||||| ||||| ||||  ||||||| |||||||  || ||||||||||||||||||    
T  35697475 aaaacatgaaattcctctctaattccgtcactaaattttgcgaccaaaaaatttgtgagagattttattttttccgttactaatttccctccctaattt 35697573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 44366136 - 44366006
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| |||||||| | |||||||||||||||| | ||||||| ||| | ||||||| |||||| |||||| ||||||||||||| ||||| |    
T  44366136 ttagtgagggaagtttagtgaggaaaaacatgaaatccctctctaattccctcattgaattttgtgaccaacgaatttgtgaggaattttattttttctg 44366037  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||  |||||||||| ||||||||| |||||    
T  44366036 tcattaatttccctctctaattttgtttttc 44366006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 146 - 231
Target Start/End: Complemental strand, 27040003 - 27039918
Alignment:
Q  146 aattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||||||||||||||||||||  ||||| |||||||||| || ||||||| ||| |||||||||| ||||||||||||||    
T  27040003 aattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgtcactaatttccctctctaattttgctttt 27039918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 28262360 - 28262489
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||||||||||||||| |||||   ||||| |||||||||| || ||||||     
T  28262360 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttcca 28262459  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  |||||||| |||||    
T  28262460 tcactaatttcccttgctaattttactttt 28262489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 26243446 - 26243331
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| | ||||| | |||| ||| | |||||||||||||||||||| ||||||| |||||| ||||||||||||| ||| ||| ||| |||||||||    
T  26243446 ttagtgaggaaaaacgtaaaattcctctctaattccgtcactaaattttacgaccaatgaatttgtgaggaattttatttttaccgccactaatttccct 26243347  T
Q  216 ccctaattttgctttt 231  Q
    |  |||||||||||||    
T  26243346 cgttaattttgctttt 26243331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 38362388 - 38362281
Alignment:
Q  124 ggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatt 223  Q
    ||||||| | |||||| ||| |||||| |||||| |||||| |||||||||||||| |||||||||| || ||||||| ||| |||||||||  ||||||    
T  38362388 ggaaaacgtaaaatccttttctaattctgtcacttaattttacgaccaaagaatttgtgaggaatttcattttttccgtcactaatttcccttactaatt 38362289  T
Q  224 ttgctttt 231  Q
    ||||||||    
T  38362288 ttgctttt 38362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 37802517 - 37802379
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| | |||||  | | ||||||||||||||||||||||||||||| ||||   |||  ||||||| |||||||    
T  37802517 ttagtgagggaaatttagagagggaaaacgtaaaatcagtctctaattccgtcactaaattttgcgaccaaaaaattgc-gagagattttattttttccg 37802419  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||  |||||| ||||||||||||||||||| || |||||    
T  37802418 tcatcaatttctctccctaattttgcttttcctagtagtg 37802379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 8763640 - 8763757
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||||||||||||||||||||||| | | ||||||||||| ||||||||  || ||| |||||| || |  ||||||| ||||||| ||| || ||    
T  8763640 aaatttagtgaaggaaaacatgaaatccatctctaattccgtcattaaattttatgatcaaggaatttgtgcgagattttattttttccgtcactaactt 8763739  T
Q  212 ccctccctaattttgctt 229  Q
      ||||||||||||||||    
T  8763740 ttctccctaattttgctt 8763757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 18609517 - 18609650
Alignment:
Q  109 gggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaa 208  Q
    |||||||||||||| |||||||||||||| ||| | ||||| | | || ||||||||||| ||| |||||| ||||| ||| ||| || |||| ||| ||    
T  18609517 gggaaatttagtgagggaaaacatgaaatacctctctaatttcatgacaaaattttgcgatcaaggaatttgtgagggattctattttctccgtcactaa 18609616  T
Q  209 tttccctccctaattttgcttttcttaatagtgt 242  Q
    ||| ||||| || |||| |||||| |||||||||    
T  18609617 ttttcctccttatttttacttttcctaatagtgt 18609650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 40018808 - 40018911
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||||||||||| || | ||||||  ||||| |||||||| ||||| |||||| | || |||||||| ||||||| ||| |||||    
T  40018808 aaatttagtgagggaaaacatgaaatctctctctaattctctcactgaattttgcaaccaacgaatttgtaagaaattttattttttccgtcactaattt 40018907  T
Q  212 ccct 215  Q
    ||||    
T  40018908 ccct 40018911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 13134749 - 13134646
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||| || ||||||| |||||||||||| |||||  |||| |||||||| |||| ||| || || ||||| ||||||| ||||||| ||| |||||    
T  13134749 aaatttagagatggaaaacttgaaatccctttctaattttgtcaataaattttacgactaaaaaaattgtgagggattttattttttccgtcactaattt 13134650  T
Q  212 ccct 215  Q
    ||||    
T  13134649 ccct 13134646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 2556134 - 2556231
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
    |||||||||||||||||||| | |||||  ||||| |||| |||||||| ||||||  ||| ||||| |||| |||||||| ||||| ||| ||||||    
T  2556134 taattccgtcactaaattttacaaccaagaaatttgtgagaaattttattttttccatcactaattttcctctctaattttactttttttagtagtgt 2556231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 29998698 - 29998633
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcg 167  Q
    |||| ||||||| ||||| |||||||||| |||||||| | | |||||||||||||||||||||||    
T  29998698 ttagtgagggaattttagagaaggaaaacgtgaaatccttctctaattccgtcactaaattttgcg 29998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 211
Target Start/End: Complemental strand, 31966647 - 31966555
Alignment:
Q  118 agtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||| ||| ||||||||||| || | |||||  || |||||||||||||||||| |||||||| ||| ||||||| ||||||| ||| |||||    
T  31966647 agtgagggataacatgaaatctctctctaattatgttactaaattttgcgaccaaggaatttat-agggattttattttttccgtcactaattt 31966555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 36373896 - 36374034
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||  |||||| ||| ||  |||| ||||||||||||| ||| ||| ||||||  |||| ||||||| |||||||    
T  36373896 ttagtgaggaaaatttagtgagggaaaatgtgaaattcctcta--attcagtcactaaattttacgatcaaggaatttgagagggattttattttttccg 36373993  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     | | || ||  ||||||||||||| ||||| || ||||||    
T  36373994 tcgctaaatttactccctaattttgtttttcctagtagtgt 36374034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 190
Target Start/End: Complemental strand, 9004447 - 9004359
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattt 190  Q
    |||| |||||||||||||||| ||||||  | ||||  || | ||||||| |||||||||||||  || || ||||||||||| |||||    
T  9004447 ttagtgagggaaatttagtgagggaaaatgtaaaatttctctctaattccatcactaaattttgtaactaaggaatttatgagaaattt 9004359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 231
Target Start/End: Original strand, 22192232 - 22192304
Alignment:
Q  159 aattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||| ||||||  ||||| ||||  ||||||| ||||||| ||| |||||| |||||| |||||||||||    
T  22192232 aattttgtgaccaataaatttgtgagagattttattttttccgtcactaatttctctccctgattttgctttt 22192304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 33818700 - 33818571
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  33818700 ttagtgagggaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccg 33818601  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||||||||||||||| ||||||||||||    
T  33818600 tcacaaatttccctccccaattttgctttt 33818571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 25397913 - 25397787
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  25397913 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgacgaattttatgttttccgtcacaaatttccct 25397814  T
Q  216 ccctaattttgcttttcttaatagtgt 242  Q
    ||||||||||||||||| || ||||||    
T  25397813 ccctaattttgcttttcctagtagtgt 25397787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 23423895 - 23423755
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||||| |||||| |||||||||||||||||| ||    
T  23423895 ttagtgagtgaaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcaaccaaggaatttgtgaggaattttatgtttttcg 23423796  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||||||||||||||||||||||||||| || || ||||||    
T  23423795 tcacaaatttccctccctaattttgcttatcctagtagtgt 23423755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 102 - 242
Target Start/End: Original strand, 618294 - 618434
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  618294 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 618393  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| |||||||||| ||||||||||||||  |||||||||    
T  618394 tcactaatttccctcgctaattttgctttttctaatagtgt 618434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 16121978 - 16121849
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||| |||||| |||||| ||||||||||||| |||||||    
T  16121978 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaattttattttttccg 16121879  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  16121878 tcactaatttccctcgctaattttgctttt 16121849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 33816897 - 33816786
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |    
T  33816897 ttagtgagggaaatttagtgagggaaaacatgaaattcctttctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttctg 33816798  T
Q  202 acacaaatttcc 213  Q
     |||||||||||    
T  33816797 tcacaaatttcc 33816786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 27428151 - 27428012
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| || |||||||| |||| ||    
T  27428151 ttagtgaggaaaatttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttattagcaattttatttttttcg 27428052  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| ||||||||||||||||||| ||||| ||| |||||    
T  27428051 tcactaatttccctccctaatttttcttttattagtagtg 27428012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 242
Target Start/End: Complemental strand, 35620477 - 35620343
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||| ||||||||| |||||||||||||||| | | |||||||||||||||||||||||||||| |||||| ||||||| ||||| ||||||| |||     
T  35620477 gagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaa-tttattttttccgtcact 35620379  T
Q  207 aatttccctccctaattttgcttttcttaatagtgt 242  Q
    |||||||||| ||||||||||||||  |||||||||    
T  35620378 aatttccctcgctaattttgctttttctaatagtgt 35620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 17039770 - 17039641
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  17039770 ttagtgagggaaatatagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 17039671  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| ||||||||||||||    
T  17039670 tcactaattttcctcactaattttgctttt 17039641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 2472848 - 2472724
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||| ||||||||| |||||||||||||||||| | ||||||||||| |||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  2472848 gagggatatttagtgagggaaaacatgaaatccctctctaattccgtcattaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 2472749  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||| || ||||||||||||||    
T  2472748 aatttccttcactaattttgctttt 2472724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 746993 - 746878
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  746993 ttagtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 746894  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  746893 cgctaattttgctttt 746878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 8886990 - 8886861
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||  | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||| ||    
T  8886990 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcatttttttcg 8886891  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||||||||| |||| ||||||||||||||    
T  8886890 tcacaaattttcctcgctaattttgctttt 8886861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 23975635 - 23975764
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23975635 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23975734  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  23975735 tcactaatttccctcgctaattttgctttt 23975764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 102 - 242
Target Start/End: Complemental strand, 25673367 - 25673228
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||||||  ||||||||||||||||| | ||||||||||||| ||||||||||||||||||||| | |||| |||||| |||||||    
T  25673367 ttagtgagggaaatttagtgacagaaaacatgaaatccctctctaattccgtcactgaattttgcgaccaaagaatttgt-aggagttttattttttccg 25673269  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgt 242  Q
     ||| ||||| |||||||||||||  ||||| || ||||||    
T  25673268 tcactaattttcctccctaatttttattttcctagtagtgt 25673228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 8108999 - 8108870
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| |||| |||||||||||||| ||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  8108999 ttagtgagagaaattttgtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 8108900  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  8108899 tcactaatttccctctctaattttgctttt 8108870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12045727 - 12045856
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||| |||||||  ||||| |||||||||| || |||||||    
T  12045727 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttacgaccaagaaatttgtgaggaatttcattttttccg 12045826  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  12045827 tcactaatttccctcgctaattttgctttt 12045856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 12328365 - 12328236
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||| ||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || |||||||    
T  12328365 ttagtgagggatatttagtgagggaaaacatgaaattcctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccg 12328266  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
      || |||||||||| ||||||||||||||    
T  12328265 ttactaatttccctcactaattttgctttt 12328236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 36196394 - 36196523
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | |||||||||||||||||||||||||||  || ||| |||||||||| || |||||||    
T  36196394 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgcgaccatggattttgtgaggaatttcattttttccg 36196493  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  36196494 tcactaatttccctcgctaattttgctttt 36196523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 16631999 - 16631884
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||||||||||| | |||||||| | ||||||||||||||||||||| |||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  16631999 ttagtgaaggaaaacgtaaaatccctctctaattccgtcactaaattttgtgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 16631900  T
Q  216 ccctaattttgctttt 231  Q
    | |||||||| |||||    
T  16631899 cgctaatttttctttt 16631884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 26708714 - 26708599
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  26708714 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26708615  T
Q  212 ccctccctaattttgc 227  Q
    ||||| ||||||||||    
T  26708614 ccctcgctaattttgc 26708599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 227
Target Start/End: Complemental strand, 26978448 - 26978333
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  26978448 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccggcactaattt 26978349  T
Q  212 ccctccctaattttgc 227  Q
    ||||| ||||||||||    
T  26978348 ccctcgctaattttgc 26978333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 38837796 - 38837681
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  38837796 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 38837697  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  38837696 cgctaattttgctttt 38837681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 33735088 - 33734982
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaatttt 225  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||  ||  ||||| |||||||||||||    
T  33735088 aaaacatgaaacccctctttaattccgtcactaaattttgcgaccaaggaatttatgagggattttattttttccctcattaattttcctccctaatttt 33734989  T
Q  226 gcttttc 232  Q
    |||||||    
T  33734988 gcttttc 33734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 7888797 - 7888926
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||||||| | ||| |||||||||||||||| ||||||| |||||| |||||||||| || |||||||    
T  7888797 ttagtgaggaaaatttagtgagggaaaacgtaaaatccctctctaactccgtcactaaattttacgaccaaggaatttgtgaggaatttcattttttccg 7888896  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  |||||||||| ||||||||||||||    
T  7888897 tcaataatttccctcgctaattttgctttt 7888926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 13620258 - 13620137
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    ||||||||||||| |||||||||||||||||| | |||||| ||||| |||||||||||||||  ||||| ||||  ||||||| ||||||| ||| |||    
T  13620258 ggaaatttagtgagggaaaacatgaaatccctctctaattctgtcacaaaattttgcgaccaacaaatttgtgagagattttattttttccgtcactaat 13620159  T
Q  210 ttccctccctaattttgctttt 231  Q
    |||||||||| ||||| |||||    
T  13620158 ttccctccctgatttttctttt 13620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 15060973 - 15061102
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| | ||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||| |    
T  15060973 ttagtgagggaaattttgtgaggaaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttcgg 15061072  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  15061073 tcactaatttccctcgctaattttgctttt 15061102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 36832029 - 36831900
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||  | |||||||| | ||||||| ||||||||||||| |||||| ||||||||||||||||| || |||| ||    
T  36832029 ttagtgagggaaatttagtgagggaaaatgtaaaatccctctctaattccatcactaaattttgtgaccaaggaatttatgaggaatttcatttttttcg 36831930  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     | | |||||||||| ||||||||||||||    
T  36831929 tccctaatttccctcactaattttgctttt 36831900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 10494751 - 10494866
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  10494751 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 10494850  T
Q  216 ccctaattttgctttt 231  Q
    | |||  |||||||||    
T  10494851 cgctacatttgctttt 10494866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 243
Target Start/End: Complemental strand, 24138970 - 24138839
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | ||||| || | ||||||||||||||||||||||||||||  ||||| |||| ||||| || ||||||| ||| |||||    
T  24138970 aaatttagtgagggaaaacgtaaaatctctctctaattccgtcactaaattttgcgaccaagcaatttgtgagaaatttcattttttccgtcaccaattt 24138871  T
Q  212 ccctccctaattttgcttttcttaatagtgta 243  Q
     |||| ||||||||||||||  ||||||||||    
T  24138870 tcctcgctaattttgctttttctaatagtgta 24138839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 36597465 - 36597350
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||| |||| ||| | |||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||||| || ||||||  ||    
T  36597465 ttagtgagggaaaacataaaattcctctctaattctgtcactaaattttacgaccaaggaatttgtgaggaattttatgttttccgtcataaatttttct 36597366  T
Q  216 ccctaattttgctttt 231  Q
    ||| ||||||||||||    
T  36597365 cccaaattttgctttt 36597350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 25652717 - 25652583
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||  | |||||||| | |||||||||||| |||||||||||| || |||||| |||||||||| || ||||| | |||     
T  25652717 gagggaaatttagtgagggaaaatgtaaaatccctctctaattccgtcacaaaattttgcgactaaggaatttgtgaggaatttcattttttctgtcact 25652618  T
Q  207 aatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||| ||||||||||||||  ||||||||    
T  25652617 gatttccctcgctaattttgctttttctaatagtg 25652583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 17986729 - 17986858
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||| | | | ||||||||||||||||||||||||| || |||||| ||| |||||| || |||||||    
T  17986729 ttagtgagggatatttagtgagggaaaacatgaaattcttctctaattccgtcactaaattttgcgacgaaggaatttgtgaagaatttcattttttccg 17986828  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| |||||||| |||||    
T  17986829 tcactaatttctctcactaattttactttt 17986858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 20959508 - 20959637
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| ||||||| || | |||||||||||||||||||| |||| || |||||| ||||||||||||| |||||||    
T  20959508 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccgtcactaaattttacgactaaggaatttgtgaggaattttattttttccg 20959607  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||   |||| ||||||||||||| |||||    
T  20959608 tcagtgattttcctccctaattttactttt 20959637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 28265609 - 28265485
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| |||| || | |||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || ||||||| |||     
T  28265609 gagggaaattttgtgagggaagacgtaaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccgtcact 28265510  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| |||| |||||||| |||||    
T  28265509 aattttcctcgctaattttactttt 28265485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 241
Target Start/End: Complemental strand, 11927925 - 11927786
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||| ||  ||||| ||||| ||||||| ||||||     
T  11927925 ttagtgagggaattttagagacggaaaacgtgaaatccctctctaattccgtcactaaattttgcgacgaagtaatttgtgagggattttattttttcca 11927826  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     | | |||||  ||||||||||||||||||  ||||||||    
T  11927825 tctctaatttatctccctaattttgctttttctaatagtg 11927786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 17772093 - 17771978
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||||| ||||| || | |||||||||||||||||||||||| ||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  17772093 ttagtgagggaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaggaatttttgaggaatttcattttttccgtcactaatttccct 17771994  T
Q  216 ccctaattttgctttt 231  Q
    | || ||||| |||||    
T  17771993 cgctgatttttctttt 17771978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 40484058 - 40484173
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||||| || ||||| ||  |||||| ||| |||||||||    
T  40484058 ttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttataagaaatttcattatttccgtcactaatttccct 40484157  T
Q  216 ccctaattttgctttt 231  Q
    | |||||||| |||||    
T  40484158 cgctaatttttctttt 40484173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 7003867 - 7003740
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| ||||||| || ||  |||||||||||||||||||||| ||  |||||| ||||||||||| | |||||||    
T  7003867 ttagtgagggaaattttgtgagggaaaacgtgaaatctctcta--attccgtcactaaattttgcgatcatggaatttgtgaggaattttcttttttccg 7003770  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  7003769 tcactaatttccctcgctaattttgttttt 7003740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 10420391 - 10420249
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| || ||||| || |||||||||||||||||| | |||||  |||||||||||||||||||||  || || ||||| ||||||| |||||||    
T  10420391 ttagtgaggaaattttagagagggaaaacatgaaatccctctctaattttgtcactaaattttgcgaccaacaaaattgtgagggattttattttttccg 10420292  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     ||| |||||||||| ||||||||| |||  ||| ||||||||    
T  10420291 tcactaatttccctctctaattttgatttctttagtagtgtaa 10420249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 23408980 - 23409110
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| | | ||||||    
T  23408980 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcatttttttcc 23409079  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||| |||||  ||| ||||||||||||||    
T  23409080 gtcactaatttttctcgctaattttgctttt 23409110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 3080825 - 3080700
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| |||||||||||||||||| |  |||| | ||||||| ||||| ||| ||||||||| ||||  ||||||| ||||||  ||| |||||    
T  3080825 aaatttagtgagggaaaacatgaaatccctctcaaatttcatcactaagttttgtgactaaagaatttgtgagagattttattttttccatcacgaattt 3080726  T
Q  212 ccctccctaattttgcttttcttaat 237  Q
    |||| |||||||||||||||| ||||    
T  3080725 ccctacctaattttgcttttcctaat 3080700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 5982650 - 5982775
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacac 205  Q
    |||| ||||||||||| ||||||| | |||||||| | |||||||||||||||| ||||||||||| |||||| |||||||||  | | ||||||| |||    
T  5982650 gaggaaaatttagtgagggaaaacctaaaatccctctctaattccgtcactaaactttgcgaccaaggaatttgtgaggaattccatttttttccgtcac 5982749  T
Q  206 aaatttccctccctaattttgctttt 231  Q
     |||||||||| || |||||||||||    
T  5982750 taatttccctcgctgattttgctttt 5982775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 244
Target Start/End: Complemental strand, 17036546 - 17036409
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||| ||||||| || |||||||   |||||||| | |||||| ||||||||||||||||||||| |||||| ||||||||||||| | ||||| |||     
T  17036546 gagggtaatttagagagggaaaacgcaaaatccctctctaattctgtcactaaattttgcgaccaaggaatttgtgaggaattttatttcttccgtcact 17036447  T
Q  207 aatttccctccctaattttgcttttcttaatagtgtaa 244  Q
    ||| || |||||||||||||| |||  || ||||||||    
T  17036446 aatctcgctccctaattttgcattttctagtagtgtaa 17036409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 4125313 - 4125198
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  ||||||| || | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||||| ||| |||||||||    
T  4125313 ttagtgagggaaaatgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccgtcactaatttccct 4125214  T
Q  216 ccctaattttgctttt 231  Q
    | |||||||| |||||    
T  4125213 cgctaattttactttt 4125198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 20188070 - 20187941
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||||||  |||||| |  |||| || | |||||| |||| |||||||||||| ||| |||||| ||||||||||||| ||||||| ||| |||||    
T  20188070 aaatttagtgagagaaaacgtagaatcactctctaattctgtcattaaattttgcgatcaaggaatttgtgaggaattttattttttccgtcactaattt 20187971  T
Q  212 ccctccctaattttgcttttcttaatagtg 241  Q
    || || ||||||||||||||  ||||||||    
T  20187970 ccttcgctaattttgcttttgctaatagtg 20187941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 32726857 - 32726732
Alignment:
Q  110 ggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaat 209  Q
    |||||||||| || ||||||  ||||||  || | |||||||||||||||||||||||||||| |||||| | | |  |||||| ||||||  ||| |||    
T  32726857 ggaaatttagagagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccaaggaatttgtcaagggttttatattttccatcactaat 32726758  T
Q  210 ttccctccctaattttgcttttctta 235  Q
    ||| ||||||||||||||||||||||    
T  32726757 ttcgctccctaattttgcttttctta 32726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 201
Target Start/End: Original strand, 17079405 - 17079504
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||  | ||||||||| |||||||| | ||||||||||||||||||||||||||||  ||||| | ||| ||||||| |||||||    
T  17079405 ttagtgagggaaatttagaaagggaaaacatcaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtaagggattttattttttccg 17079504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 35778155 - 35778270
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | | |||| || | |||||||||||||||| |||||| ||||  ||||||| ||||||  ||| |||||||||    
T  35778155 ttagtgagggaaaacatgaaatccctatctcattctgtgattaaattttgcgaccaatgaatttgtgagagattttattttttccatcactaatttccct 35778254  T
Q  216 ccctaattttgctttt 231  Q
    ||| |||||| |||||    
T  35778255 cccaaattttactttt 35778270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 13974217 - 13974088
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | | |||||||||||||||||  ||||||   ||||| ||| |||||| || |||| ||    
T  13974217 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctgattccgtcactaaatttcacgaccatgaaatttgtgaagaatttcatttttttcg 13974118  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     | | |||||||||| ||||||||||||||    
T  13974117 tcgctaatttccctcgctaattttgctttt 13974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 31853203 - 31853131
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgtttt 198  Q
    ||||||||||||| || | ||||||||||||||||||||||||||| | ||||||||||| ||||||| ||||    
T  31853203 aaaacatgaaatctctctctaattccgtcactaaattttgcgaccataaaatttatgagggattttatttttt 31853131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 16472277 - 16472191
Alignment:
Q  145 taattccgtcactaaa-ttttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||| ||||||||| |||||||||||| |||||| ||| | ||||||| |||| |||||| ||||| |||||| ||||||||||||    
T  16472277 taattctgtcactaaacttttgcgaccaacgaatttttgaaggattttatttttttcgacactaattt-cctcccaaattttgctttt 16472191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 211
Target Start/End: Original strand, 9024267 - 9024323
Alignment:
Q  155 actaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||||||||||||| ||||||| |||| ||||||| ||||||| ||| |||||    
T  9024267 actaaattttgcgaccaaggaatttacgagggattttattttttccgtcactaattt 9024323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 18413556 - 18413623
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgac 169  Q
    |||| ||||||||||||| || ||||||| |||| ||||||| ||||||||||  |||||||| ||||    
T  18413556 ttagtgagggaaatttagagagggaaaacgtgaattccctttttaattccgtcgttaaattttacgac 18413623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 50845459 - 50845340
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  50845459 aaatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttatgttttccgtcacaaattt 50845360  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||||||||||||||||||    
T  50845359 ccctccctaattttgctttt 50845340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 14760867 - 14760996
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  14760867 ttagtgagggaaatttagtgagggaaaacatgaaatccctcactaattccgtcactaaattttgcgaccaaagaatttgtgaggaattttatgttttccg 14760966  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||||||||||||||  |||||||||||||    
T  14760967 tcacaaatttccctctttaattttgctttt 14760996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 13102316 - 13102455
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  13102316 ttagtgagggaaatttagtgagggaaaacataaaatctctttctaattccgtcactaaattttgcgaccaaggaatttgtgatgaattttatgttttccg 13102415  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||||||||| |||||||||||||| || |||||    
T  13102416 tcacaaatttccctccttaattttgcttttcctagtagtg 13102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12720809 - 12720938
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||    
T  12720809 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaattttattttttccg 12720908  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  12720909 tcactaatttccctcgctaattttgctttt 12720938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 7830031 - 7830170
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||| |||||||||||||||||||||| |||||| |||| |||||||||||||||     
T  7830031 ttagtgagggaaatttagtgagggaaaacatgaaatccctccctaatttcgtcactaaattttgcgaccaaggaatttgtgagaaattttatgttttcca 7830130  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     || ||||||||||||||||||||||||||| || |||||    
T  7830131 tcataaatttccctccctaattttgcttttcctagtagtg 7830170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 6459217 - 6459346
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6459217 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6459316  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||| ||||||    
T  6459317 tcactaatttccctcgctaatttcgctttt 6459346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9110114 - 9109985
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  9110114 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 9110015  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  9110014 tcactaatttccctcgctaattttgctttt 9109985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 45839292 - 45839421
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  45839292 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 45839391  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||||  |||||||||||||    
T  45839392 tcactaatttccctcgttaattttgctttt 45839421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 18895039 - 18894897
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| |||||||||||||||||| | ||||| ||||||||||||||||||||||||||| | ||||| ||||||| |||| ||    
T  18895039 ttagtgaggaaaatttagtgagggaaaacatgaaatccctctctaatttcgtcactaaattttgcgaccaaagaatatgtgaggtattttatttttttcg 18894940  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     ||| ||||| |||| ||||||||||||||| || ||||||||    
T  18894939 tcactaattttcctcgctaattttgcttttcctagtagtgtaa 18894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 6412192 - 6412063
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || |||||||    
T  6412192 ttagtgagggatatttagtgagggaaaacatgaaatccctctttaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 6412093  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
      || |||||||||| ||||||||||||||    
T  6412092 ttactaatttccctcgctaattttgctttt 6412063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 41752433 - 41752562
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||  |||||||| |||||||    
T  41752433 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaaaaattttattttttccg 41752532  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||| || ||||||||||||||    
T  41752533 tcactaatttccgtcactaattttgctttt 41752562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 46790014 - 46790129
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| || ||||||| ||| |||||||||    
T  46790014 ttagtgagggaaaacgtaaaatccctttctaattccgtcattaaattttgcgaccaaagaatttgtgaggaatttcattttttccgtcactaatttccct 46790113  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  46790114 cgctaattttgctttt 46790129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 4340417 - 4340547
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||    
T  4340417 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaattt 4340516  T
Q  212 ccctccctaattttgcttttcttaatagtgt 242  Q
    ||||  ||||||||||||||  |||||||||    
T  4340517 cccttgctaattttgctttttctaatagtgt 4340547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 16913716 - 16913586
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || |||||||||||||||||| | ||||||||| | |||||||| |||| || |||||| ||||||||||||| |||||||    
T  16913716 ttagtgagggaaatttagagagggaaaacatgaaatccctctctaattccgttattaaattttacgactaaggaatttgtgaggaattttattttttccg 16913617  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| ||||||||| ||||||||||||||||    
T  16913616 tcactaatttcccttcctaattttgcttttc 16913586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 102 - 216
Target Start/End: Complemental strand, 41071974 - 41071860
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || || ||||    
T  41071974 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttctccg 41071875  T
Q  202 acacaaatttccctc 216  Q
     ||| ||||||||||    
T  41071874 tcactaatttccctc 41071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 9464103 - 9464232
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||  |||||| |||||||||| || |||||||    
T  9464103 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 9464202  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||| || |||||||| |||||    
T  9464203 tcactaatttccgtcactaattttactttt 9464232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 15243085 - 15243214
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||| ||| |||||| |||||||||| || |||||||    
T  15243085 ttagtgagggaaatttagtgagggaaaacgtgaaatccctatctaattccgtcactaaattttgcgatcaaggaatttgtgaggaatttcattttttccg 15243184  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||| ||| || ||||| |||||    
T  15243185 tcactaatttctctcgctgatttttctttt 15243214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 20408299 - 20408170
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | ||||||||| |||||||||||||||||  |||||| |||||||||| || |||||||    
T  20408299 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgttactaaattttgcgaccatggaatttgtgaggaatttcattttttccg 20408200  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| ||||||||||||||    
T  20408199 tcactaattttcctcgctaattttgctttt 20408170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 22603548 - 22603677
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | ||||| || | |||||||||||||||||||||||| |||||||||| |||||||||| || ||||||     
T  22603548 ttagtgagggaaatttagtgagggaaaacgtaaaatcgctctctaattccgtcactaaattttgcgatcaaagaatttgtgaggaatttcattttttcca 22603647  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  22603648 tcactaatttcccttgctaattttgctttt 22603677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 29549418 - 29549547
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||| ||||| ||| ||||| |||| |||||||| |||| ||    
T  29549418 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaatttcgcgactaaaaaatttgtgagaaattttatttttttcg 29549517  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  29549518 tcactaatttccctcgctaattttgctttt 29549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 38531309 - 38531180
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| ||||||| || | ||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||    
T  38531309 ttagtgagggaaatttagagagggaaaacgtgaaatctctctctaattccatcactaaattttgcgactaaggaatttgtgaggaattttattttttccg 38531210  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  |||||||||||||||||| |||||    
T  38531209 tcacttatttccctccctaattttactttt 38531180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 52183678 - 52183807
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  52183678 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 52183777  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  ||||||||||  |||||||||||||    
T  52183778 tcattaatttccctcgttaattttgctttt 52183807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 46339579 - 46339455
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||| ||||||| | ||||||||||||||| || | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| |||     
T  46339579 gagggatatttagtaagggaaaacatgaaatctctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcact 46339480  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| |||| ||||||||||||||    
T  46339479 aattttcctcgctaattttgctttt 46339455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 247
Target Start/End: Complemental strand, 13308945 - 13308814
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| | |||||||||||||||| | ||||| | ||||||||||||||||||||  ||||| ||||||||||||| ||||| ||||| |||||||||    
T  13308945 ttagtgaggaaaaacatgaaatccctctctaatttcatcactaaattttgcgaccaataaatttgtgaggaattttattttttcggacactaatttccct 13308846  T
Q  216 ccctaattttgcttttcttaatagtgtaataa 247  Q
    | ||||||||| ||||| || ||||| |||||    
T  13308845 ctctaattttgtttttcctagtagtgaaataa 13308814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 19865258 - 19865373
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| ||||| |||    
T  19865258 ttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaattttcct 19865357  T
Q  216 ccctaattttgctttt 231  Q
    | |||||||| |||||    
T  19865358 cgctaattttactttt 19865373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 102 - 225
Target Start/End: Complemental strand, 22789730 - 22789607
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||||| || ||||||| ||||||| || | |||||| ||||||||||||||||||||  |||||| |||| ||||||||||||||||    
T  22789730 ttagtgagggaaatttagagagggaaaacgtgaaatctctatctaattcagtcactaaattttgcgaccatggaatttgtgagaaattttatgttttccg 22789631  T
Q  202 acacaaatttccctccctaatttt 225  Q
     ||| ||||| |||||||||||||    
T  22789630 tcactaattttcctccctaatttt 22789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 28229580 - 28229465
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||    
T  28229580 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccct 28229481  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  28229480 cgctaattttgctttt 28229465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 41120866 - 41120747
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  ||||| |||||||||| || ||||||  ||| |||||    
T  41120866 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccatcactaattt 41120767  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  41120766 ccctcgctaattttgctttt 41120747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 22158802 - 22158931
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || ||||| |    
T  22158802 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttctg 22158901  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  22158902 tcactaatttccctcgctaattttactttt 22158931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 48522518 - 48522647
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| || |||||| |||||||||||||| ||| |  |||||||||||||||||||||||||||| ||||| |||| |||||||| ||||| |    
T  48522518 ttagtgagggatatgtagtgagggaaaacatgaaattcctcttaaattccgtcactaaattttgcgaccaaaaaatttgtgagaaattttattttttctg 48522617  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| |||| ||||||||||||||    
T  48522618 tcactaattttcctcgctaattttgctttt 48522647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 51973429 - 51973553
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||| |||| ||||||  ||||||  || | ||||||||||||||||||||||||||| ||| |||||||||||||| || |||||||  ||     
T  51973429 gagggaaattttgtgagggaaaatgtgaaatttctctctaattccgtcactaaattttgcgaccatagattttatgaggaatttcattttttccgttact 51973528  T
Q  207 aatttccctccctaattttgctttt 231  Q
    |||||||||| ||||||||||||||    
T  51973529 aatttccctcgctaattttgctttt 51973553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 17661050 - 17661189
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||| ||| | ||||||| |||||||||||||||||||   ||||| ||||||||||||| |||||||    
T  17661050 ttagtgagggaaattttgtgagggaaaacgtgaaattcctctctaattccatcactaaattttgcgaccatgaaatttgtgaggaattttattttttccg 17661149  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| ||||||| ||  |||||||||||||  ||||||||    
T  17661150 tcactaatttccgtcgttaattttgctttttctaatagtg 17661189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 19081728 - 19081867
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||| ||||||| |||||| |||| |||||||| ||||||     
T  19081728 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcca 19081827  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| |||||||| ||||| ||| |||||    
T  19081828 tcactaatttccctctctaattttactttttttagtagtg 19081867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 19129616 - 19129755
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | |||||| ||||||||||||| ||||||| |||||| |||| |||||||| ||||||     
T  19129616 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattctgtcactaaattttacgaccaaggaatttgtgagaaattttattttttcca 19129715  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||||||| |||||||| ||||| ||| |||||    
T  19129716 tcactaatttccctctctaattttactttttttagtagtg 19129755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 46786087 - 46785968
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||| |||||||||||||||| ||| || |||| ||||| || ||||||| ||| |||||    
T  46786087 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcattaaattttgcgaccaaggaacttgtgagaaatttcattttttccgtcactaattt 46785988  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  46785987 ccctcgctaattttgctttt 46785968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9985466 - 9985337
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| | ||||| | |||||||| | ||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||    
T  9985466 ttagtgagggaaattttgtgaggaaaaacgtaaaatccctctctaattccgtcaataaattttacgaccaaagaatttgtgaggaatttgattttttccg 9985367  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||| ||||    
T  9985366 tcactaatttcccttgctaattttgttttt 9985337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12161814 - 12161943
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  12161814 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 12161913  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  ||||| |||| |||||||| |||||    
T  12161914 tcaataattttcctcgctaattttactttt 12161943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 17200149 - 17200020
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| | |||| || |||| | | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  17200149 ttagtgagggaaatttagtgaggaaaaatataaaattcttctttaattccgtcactaaattttgcgaccaatgaatttgtgaggaatttcattttttccg 17200050  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     |||  ||||||||| ||||||||| ||||    
T  17200049 tcactgatttccctcgctaattttgttttt 17200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 18890688 - 18890559
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | ||||||||| |||||||||||||||||   ||||| |||||||||| || ||||||     
T  18890688 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgttactaaattttgcgaccattaaatttgtgaggaatttcattttttcca 18890589  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  18890588 tcactaatttccctcgctaattttgctttt 18890559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 23457897 - 23458026
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||   ||||| |||||||||| || |||||||    
T  23457897 ttagtgagggaaattttgtgagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccatgaaatttgtgaggaatttcattttttccg 23457996  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  ||||| |||| |||||||| |||||    
T  23457997 tcaataattttcctcgctaattttactttt 23458026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 199
Target Start/End: Complemental strand, 12174900 - 12174808
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 199  Q
    |||||| ||||||||| |||||||||||||||| | | ||||||||||||||||||||||||| || |||||| ||||||||||||| |||||    
T  12174900 gagggatatttagtgagggaaaacatgaaatccttctctaattccgtcactaaattttgcgacgaaggaatttgtgaggaattttattttttc 12174808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 111 - 231
Target Start/End: Complemental strand, 50092428 - 50092308
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 210  Q
    ||||||| |||| |||||||||||||||||| | ||||||||||||||||||||| || ||   ||||| |||||||||| || ||||||| ||| ||||    
T  50092428 gaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgtgatcatgaaatttgtgaggaatttcattttttccgtcactaatt 50092329  T
Q  211 tccctccctaattttgctttt 231  Q
    |||||| |||||||| |||||    
T  50092328 tccctcgctaatttttctttt 50092308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 12989852 - 12989991
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| | || ||||||| ||||||| ||   |||||| ||||||||| ||||||||||| |||||| |||| |||||||| |||||||    
T  12989852 ttagtgagggaaattttgagagggaaaacgtgaaatctctccctaattcagtcactaaactttgcgaccaaggaatttgtgagaaattttattttttccg 12989951  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||| |||||| ||| |||||||||||||| ||| |||||    
T  12989952 tcaccaatttctctctctaattttgctttttttagtagtg 12989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 244
Target Start/End: Complemental strand, 7181694 - 7181552
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| || | ||||||| |||||||||| | ||||||||||||||||||||| |||||   ||| | ||||||||||| | |||||||    
T  7181694 ttagtgagggaaattttgtaagggaaaacgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatatgtgaggaattttcttttttccg 7181595  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtgtaa 244  Q
     ||| |||||||||  ||||||||||||||  || ||||||||    
T  7181594 tcactaatttcccttgctaattttgctttttctagtagtgtaa 7181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 13523100 - 13523002
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 200  Q
    |||| ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  13523100 ttagtgagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgagaaattatattttttcc 13523002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 25788105 - 25788007
Alignment:
Q  133 gaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    ||||||||| | |||||||||||||||||||||||||||  |||||| ||||||||||| | ||||||| ||| ||||| |||| ||||||||||||||    
T  25788105 gaaatccctctctaattccgtcactaaattttgcgaccatggaatttgtgaggaattttcttttttccgtcactaattttcctcgctaattttgctttt 25788007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 41063197 - 41063326
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| | ||||||| ||||| || | |||||||||||||||||||||||| |||||||| | ||||| ||||||| |||||||    
T  41063197 ttagtgaggaaaatttagtgaggaaaaacataaaatctctctctaattccgtcactaaattttgcgatcaaagaatatgtgagggattttattttttccg 41063296  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| ||| | ||||||| |||||    
T  41063297 tcactaattttccttcttaattttactttt 41063326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 9177110 - 9177229
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| | ||||| | |||||||| | ||||| ||||||||||||||||||||||  ||||| |||||||||| || |||||||  || |||||    
T  9177110 aaatttagtgaggaaaaacgtaaaatccctctttaatttcgtcactaaattttgcgaccaagaaatttgtgaggaatttcattttttccgttactaattt 9177209  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||| ||||    
T  9177210 ccctcgctaattttgttttt 9177229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 11917799 - 11917925
Alignment:
Q  115 tttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccc 214  Q
    ||||| || ||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||  ||||| | |||| || |||  |||||||    
T  11917799 tttagagagggaaaacgtgaactccctttctaattccgtcactaaattttgcgaccaaataatttgtgagatattttgt-tttttcgtcactgatttccc 11917897  T
Q  215 tccctaattttgcttttcttaatagtgt 242  Q
    || |||||||| |||||| |||||||||    
T  11917898 tctctaatttttcttttcctaatagtgt 11917925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 30928517 - 30928387
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||| |||  |||||||||||||  || | ||||||  |||||||||||||||||||| |||||| | ||  ||||||| |||||||    
T  30928517 ttagtgaggaaaatttactgagtgaaaacatgaaatttctctctaattctctcactaaattttgcgaccaaggaatttgttagagattttattttttccg 30928418  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| |||||||||| |||||||||||||||    
T  30928417 tcactaatttccctctctaattttgcttttc 30928387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 201
Target Start/End: Original strand, 41359001 - 41359087
Alignment:
Q  116 ttagtgaaggaaaacatgaaa-tccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    ||||||| ||||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  41359001 ttagtgagggaaaacataaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 41359087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9259322 - 9259193
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| ||||||| || | |||||||||||||||||||||||||||   ||||| |||| |||||| | |||||||    
T  9259322 ttagtgagggaaattttgtgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcgaccatgaaatttgtgagaaattttcttttttccg 9259223  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||| ||||  |||||||| ||||    
T  9259222 tcactaattttcctcgttaattttgttttt 9259193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 179
Target Start/End: Complemental strand, 12370080 - 12370003
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaattt 179  Q
    |||| |||||||||||||| | ||||||||| |||||| | | |||||||||||||||||||||||||||||||||||    
T  12370080 ttagtgagggaaatttagtaagggaaaacataaaatccttctctaattccgtcactaaattttgcgaccaaagaattt 12370003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 39748943 - 39749072
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    |||||||||||||||||||||||||||||  |  |||| |||||||||||||||||| |||| || ||  |||  ||||| | ||||||| ||| |||||    
T  39748943 aaatttagtgaaggaaaacatgaaatccccctcaaatttcgtcactaaattttgcgatcaaacaaattgcgagagatttttttttttccgtcactaattt 39749042  T
Q  212 ccctccctaattttgcttttcttaatagtg 241  Q
    | |||| |||||||||||||| || |||||    
T  39749043 cgctccttaattttgcttttcctagtagtg 39749072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 46865243 - 46865372
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||| || || ||| ||| |||||||||| | ||||||| | ||||||||||||| ||||  ||||| ||||| ||||||| |||||||    
T  46865243 ttagtgagggaaattcagagagggagaacgtgaaatccctctctaattccattactaaattttgcggccaagaaatttgtgagggattttattttttccg 46865342  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||||||| |||| |||||    
T  46865343 tcactaatttccctccctagtttttctttt 46865372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 241
Target Start/End: Complemental strand, 12806952 - 12806836
Alignment:
Q  126 aaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgag-gaattttatgttttccgacacaaatttccctccctaattt 224  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||  ||||| |||| || || | | ||||| | ||| |||||||||||||||| |    
T  12806952 aaaacttgaaatccctctataattccgtcactaaattttacgaccaagaaatttgtgagagatttattttttttctgtcactaatttccctccctaatat 12806853  T
Q  225 tgcttttcttaatagtg 241  Q
    |||||||| ||||||||    
T  12806852 tgcttttcctaatagtg 12806836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 8941119 - 8941004
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||| ||| | |||||||||| ||||||||| ||| ||| |||||| |||| ||||| || ||||||| ||| |||||||||    
T  8941119 ttagtgagggaaaacgtaaaattcctctctaattccgtcgctaaattttacgatcaaggaatttgtgagaaatttcattttttccgtcactaatttccct 8941020  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  8941019 cgctaattttgctttt 8941004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 17734093 - 17733962
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaa-ttttgcgaccaaagaatttatgaggaattttatgttttcc 200  Q
    |||| |||||||||||||||| ||||||||||||||| ||   ||||||| ||| |||| ||||||||||||  ||||| ||||  ||||||| ||||||    
T  17734093 ttagtgagggaaatttagtgagggaaaacatgaaatctctcgctaattccatcattaaatttttgcgaccaagaaatttgtgagagattttatcttttcc 17733994  T
Q  201 gacacaaatttccctccctaattttgcttttc 232  Q
    | ||| || ||  |||||||||||||||||||    
T  17733993 gtcactaaattttctccctaattttgcttttc 17733962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 27253951 - 27253865
Alignment:
Q  145 taattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||||||||||||||||||||  |||||| |||| |||||||| ||||||| ||  ||||| ||||||||||||| |||||    
T  27253951 taattccgtcactaaattttgcgaccatggaatttgtgagaaattttattttttccgtcattaattttcctccctaatttttctttt 27253865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 211
Target Start/End: Original strand, 32046876 - 32046985
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||| |||||| ||||||| | ||||| || | |||||||| |||||||||||||||||||  ||||| |||||||||| || |||||||    
T  32046876 ttagtgagggaaatatagtgagggaaaacgtaaaatctctctctaattccgacactaaattttgcgaccaagaaatttgtgaggaatttcattttttccg 32046975  T
Q  202 acacaaattt 211  Q
     ||| |||||    
T  32046976 tcactaattt 32046985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 18788001 - 18787923
Alignment:
Q  152 gtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||||||||||||||||| |||||| |||| ||||||| |||| || ||| ||||||| |||||||||||||||||    
T  18788001 gtcactaaattttgcgaccaaaaaatttaggagggattttat-tttttcgtcactaatttccatccctaattttgctttt 18787923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 26825246 - 26825369
Alignment:
Q  108 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 207  Q
    |||||| ||||| || ||||||| |||||| ||| | |||||||||||||||||||| ||| |||||||||| ||||| |  |||| ||||||| ||| |    
T  26825246 agggaattttagagagggaaaacgtgaaattcctctctaattccgtcactaaattttacgatcaaagaatttgtgagggaagttattttttccgtcacta 26825345  T
Q  208 atttccctccctaattttgctttt 231  Q
    |||| | ||| ||| |||||||||    
T  26825346 attttcttccataactttgctttt 26825369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 232
Target Start/End: Complemental strand, 16258625 - 16258495
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| |||||||| || | ||||| ||||| |||| |||||||||||||||||||||||| ||||| |||| | ||||  |||||||  ||||||    
T  16258625 ttagtgaggaaaatttagagaggaaaaacgtgaaaaccctctataattccgtcactaaattttgcaaccaaggaatctgtgagatattttattctttccg 16258526  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||| || || | ||| ||||||||||||||    
T  16258525 ccactaaattacatccttaattttgcttttc 16258495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 227
Target Start/End: Original strand, 13195588 - 13195708
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| || ||||||    |||||||| | |||||| |||||||||||||||| || | |||||  ||||||||||||  ||||||  |||     
T  13195588 gagggaaatttagagagggaaaatgcaaaatccctctctaattctgtcactaaattttgcgtcccaggaattcgtgaggaattttaacttttccatcact 13195687  T
Q  207 aatttccctccctaattttgc 227  Q
    ||| |||||||||||||||||    
T  13195688 aatctccctccctaattttgc 13195708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 20290459 - 20290331
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||| ||||||| ||||  |||||| |||||||  | | |||||||||||||||||||| || |||   ||||| |||||||||| || |||||||    
T  20290459 ttagtgagagaaattttgtgagagaaaacgtgaaatcattctctaattccgtcactaaattttacggccatgaaatttgtgaggaatttcat-ttttccg 20290361  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  20290360 tcactaatttccctcgctaattttactttt 20290331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 49881058 - 49881182
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||| |||||||||||||| | |||| | || ||||||||||| |||||| ||||||||||   ||||||| ||||||| ||| || || |||    
T  49881058 ttagtgagggataacatgaaatccctctctaatcctgttactaaattttgtgaccaaggaatttatgaaagattttattttttccgtcactaactttcct 49881157  T
Q  216 ccctaattttgcttttcttaatagtg 241  Q
     ||||||||||| |||| ||| ||||    
T  49881158 -cctaattttgcatttcctaacagtg 49881182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 111 - 231
Target Start/End: Original strand, 6775896 - 6776015
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatt 210  Q
    ||||||||||||   ||||| | |||| ||| | |||||||||  |||| |||||| |||||||||||| ||||| ||||||| ||||||  |||  |||    
T  6775896 gaaatttagtgagaaaaaacttaaaattcctctctaattccgttgctaagttttgcaaccaaagaatttgtgagggattttattttttccatcac-tatt 6775994  T
Q  211 tccctccctaattttgctttt 231  Q
    |||||| ||||||||||||||    
T  6775995 tccctctctaattttgctttt 6776015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 20580909 - 20581049
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| ||| ||| ||||| || ||||||| |||||||||| | ||||| ||| | ||||||||||||| || |||||| |||| ||||| | | ||||||    
T  20580909 ttagtgagagaattttagagagggaaaacgtgaaatccctctctaatttcgtaattaaattttgcgactaaggaatttgtgagaaatttaatttttttcc 20581008  T
Q  201 gacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
      ||| |||||||||| |||||||| ||||| ||| |||||    
T  20581009 atcactaatttccctctctaattttactttttttagtagtg 20581049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 232
Target Start/End: Complemental strand, 45919028 - 45918913
Alignment:
Q  117 tagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttccgacacaaatttccct 215  Q
    |||||| ||| ||||| |||||||| | |||||| || |||||||||||| ||||| |||||||||||| |||| | | ||||||| ||||| ||| |||    
T  45919028 tagtgagggataacatcaaatccctctctaattctgttactaaattttgcaaccaaggaatttatgagggatttcatttttttccgtcacaagttttcct 45918929  T
Q  216 ccctaattttgcttttc 232  Q
     ||||||||||| ||||    
T  45918928 -cctaattttgcatttc 45918913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 14486771 - 14486698
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaaga 175  Q
    |||| |||| |||||||| || ||||||| ||||||| || | ||||||||||||| |||||||||| ||||||    
T  14486771 ttagtgaggaaaatttagagagggaaaacgtgaaatctctctctaattccgtcactgaattttgcgatcaaaga 14486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 166
Target Start/End: Complemental strand, 25687410 - 25687355
Alignment:
Q  111 gaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgc 166  Q
    ||||||||| |||||||||||| | |||||| | ||||||| ||||||||||||||    
T  25687410 gaaatttagagaaggaaaacattacatccctctctaattccttcactaaattttgc 25687355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Original strand, 52621154 - 52621252
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttcc 200  Q
    |||| |||| ||||||||||| | |||||||||||| | |   ||||||| ||||||||||||  ||| ||| ||||||||||  ||||||| ||||||    
T  52621154 ttagtgaggaaaatttagtgaggaaaaacatgaaattcttcactaattccatcactaaattttatgactaaataatttatgagagattttattttttcc 52621252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 9882162 - 9882070
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| | ||||||| |||| ||| | |||||||||||||||||||||||   ||  ||||| ||||| ||||||| ||||||| ||| |||||    
T  9882162 ttagtgaggaaaaacattaaattcctctctaattccgtcactaaattttgcg---aagaaatttgtgagggattttattttttccgtcactaattt 9882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 199
Target Start/End: Complemental strand, 29093693 - 29093596
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttc 199  Q
    |||| ||||||||||||| || ||||||  | |||| ||| | ||||||| ||| ||||||||||||  || ||| || ||||||||||||| |||||    
T  29093693 ttagtgagggaaatttagagatggaaaatgtaaaattcctctctaattccatcattaaattttgcgattaaggaacttgtgaggaattttattttttc 29093596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 30673504 - 30673585
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttat 193  Q
    ||||||||||| |||||||||||||||||| | ||||||  | ||||||||||  || |||| ||||| ||| | |||||||    
T  30673504 aaatttagtgagggaaaacatgaaatccctctctaattctattactaaattttatgagcaaaaaatttgtgaaggattttat 30673585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 102 - 232
Target Start/End: Original strand, 10158 - 10288
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  10158 ttagtgagggaaatttactgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgattaaagaatttgtgaggaattttatgttttccg 10257  T
Q  202 acacaaatttccctccctaattttgcttttc 232  Q
     ||||||||||||||||||||||||||||||    
T  10258 tcacaaatttccctccctaattttgcttttc 10288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 1058 - 928
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaatttta-tgttttcc 200  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  1058 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttatgaggaattttatttttttcc 959  T
Q  201 gacacaaatttccctccctaattttgctttt 231  Q
    | ||  |||||||||| ||||||||||||||    
T  958 gtcagtaatttccctcgctaattttgctttt 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 7505 - 7634
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || |||||||    
T  7505 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcatattttccg 7604  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  7605 tcactaatttccctcgctaattttgctttt 7634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 19603 - 19732
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  19603 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 19702  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  19703 tcactaatttcccttgctaattttgctttt 19732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 9368 - 9239
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||| | | |||||||||||||||||||||||||||| |||||| |||||||||| || |||||||    
T  9368 ttagtgagggaaatttagtgagggaaaacgtaaaatccttctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 9269  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  9268 tcactaatttccctcactaattttgctttt 9239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 12653 - 12781
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||| |||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||||| || |||||||    
T  12653 ttagtgagggaaattttgtgagggaaaacgtgaa-tccctctctaattccgtcactaaattttgcgaccatagaatttatgaggaatttcattttttccg 12751  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  12752 tcactaatttccctcgctaattttgctttt 12781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 26483 - 26612
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| || |||||||    
T  26483 ttagtgagggacatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaagaatttgtgaggaatttcattttttccg 26582  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||| || ||||||||||||||    
T  26583 tcactaatttccgtcactaattttgctttt 26612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 8249 - 8120
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||    
T  8249 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 8150  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  |||||||||| ||||||||||||||    
T  8149 tcattaatttccctcgctaattttgctttt 8120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 21981 - 21852
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| |||||| | |||||||| || |||||||    
T  21981 ttagtgagggatatttagtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgttaggaatttcattttttccg 21882  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||  |||||||||| ||||||||||||||    
T  21881 tcattaatttccctcgctaattttgctttt 21852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 84303 - 84432
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| ||||||  |||||||||| | ||||||||||||||||||||| |||||   ||||| |||||||||| || |||||||    
T  84303 ttagtgagggaaattttgtgagggaaaatgtgaaatccctctctaattccgtcactaaattttgtgaccatgaaatttgtgaggaatttcattttttccg 84402  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||  ||||||||||||||    
T  84403 tcactaatttcccttgctaattttgctttt 84432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 3747 - 3871
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||| |||     
T  3747 gagggaaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccgtcact 3846  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| |||| ||||||||||||||    
T  3847 aattttcctcgctaattttgctttt 3871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 202774 - 202903
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||| ||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || |||||||    
T  202774 ttagtgaggaaaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgaccaaggaatttgtgagcaatttcattttttccg 202873  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  202874 tcactaatttccctcgctaatttttctttt 202903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 276273 - 276207
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcga 168  Q
    |||| ||||||||||| ||||  |||||| |||||||||| | ||||||||||||||||||||||||    
T  276273 ttagtgagggaaattttgtgagagaaaacgtgaaatccctctctaattccgtcactaaattttgcga 276207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 102 - 241
Target Start/End: Original strand, 10892 - 11031
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||| ||| | |||||||||||| ||| | |||||| |||||||||||||| |||||| |||||| ||||||||||||| |||| ||    
T  10892 ttagtgagggaaatttactgaggaaaaacatgaaattcctctctaattctgtcactaaattttgtgaccaaggaatttgtgaggaattttatatttttcg 10991  T
Q  202 acacaaatttccctccctaattttgcttttcttaatagtg 241  Q
     ||||||||||| |||||||||||||||||| ||| ||||    
T  10992 tcacaaatttccttccctaattttgcttttcctaacagtg 11031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 6118 - 5989
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || |||||||    
T  6118 ttagtgagggaaatttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttccg 6019  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||| ||||    
T  6018 tcactaatttccctcgctaattttgttttt 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 37926 - 37797
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| ||||||||||| |||| |||||||||||||||||| | ||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||||    
T  37926 ttagtgagggaaattttgtgagggaaaacatgaaatccctctctaattccgtcactaaattttgcgaccataaaatttgtgaggaattttattttttccg 37827  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| ||||||||   ||||||||| ||||    
T  37826 tcactaatttcccctgctaattttgttttt 37797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 15119 - 15000
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||||||  |||||||||||||||| || ||||| | ||| |||||    
T  15119 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgaccaagaaatttatgaggaatttcattttttcggtcactaattt 15020  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  15019 ccctcgctaattttgctttt 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 10792 - 10673
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||| ||| | ||||||||||||||||||||||||| || |||||| |||||||||| || ||||||| ||| |||||    
T  10792 aaatttagtgagggaaaacgtaaaattcctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcattttttccgtcactaattt 10693  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  10692 ccctcgctaattttgctttt 10673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 22221 - 22340
Alignment:
Q  112 aaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||||| ||||||| | |||||||| | ||||||||||||||||||||||||| || |||||| |||||||||| || |||| || ||| |||||    
T  22221 aaatttagtgagggaaaacgtaaaatccctctctaattccgtcactaaattttgcgactaaggaatttgtgaggaatttcatttttttcgtcactaattt 22320  T
Q  212 ccctccctaattttgctttt 231  Q
    ||||| ||||||||||||||    
T  22321 ccctcgctaattttgctttt 22340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 62; Significance: 8e-27; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 114 - 231
Target Start/End: Original strand, 219648 - 219765
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttcc 213  Q
    ||||||||| |||||||||||||||||| | ||||||||| ||||||||||||||  ||| ||||| |||||||||| || ||||||| ||| |||||||    
T  219648 atttagtgagggaaaacatgaaatccctctctaattccgttactaaattttgcgattaaaaaatttgtgaggaatttcattttttccgtcactaatttcc 219747  T
Q  214 ctccctaattttgctttt 231  Q
     || ||||||||||||||    
T  219748 gtcgctaattttgctttt 219765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 182562 - 182659
Alignment:
Q  134 aaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||| | |||||||||||||||||||||||||||| |||||| |||| ||||| || ||||||| ||| |||||||||| |||||||| |||||    
T  182562 aaatccctctctaattccgtcactaaattttgcgaccaaggaatttgtgagaaatttcattttttccgtcactaatttccctcgctaattttactttt 182659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 215742 - 215663
Alignment:
Q  162 tttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagtg 241  Q
    ||||||||||| |||||| |||||||||| || ||||||| | | |||||| ||| |||||||||||||| ||| |||||    
T  215742 tttgcgaccaaggaatttgtgaggaatttcattttttccgtcgctaatttctctcgctaattttgctttttttagtagtg 215663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 84799 - 84684
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||| | |||||||| | ||||||| |||||||||||||||||||| |||||| |||||||||| || ||||| | ||| |||||||||    
T  84799 ttagtgagggaaaacgtaaaatccctctctaattccatcactaaattttgcgaccaaggaatttgtgaggaatttcattttttctgtcactaatttccct 84700  T
Q  216 ccctaattttgctttt 231  Q
    | ||||||||||||||    
T  84699 cactaattttgctttt 84684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 241
Target Start/End: Complemental strand, 121121 - 120987
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||| ||||| || ||||||| |||||||||| | ||||||||||||||||||||||||||||  ||||| |||| |||||||| |||| |   ||     
T  121121 gagggaattttagagagggaaaacgtgaaatccctctctaattccgtcactaaattttgcgaccaagaaatttgtgagaaattttatttttttcataact 121022  T
Q  207 aatttccctccctaattttgcttttcttaatagtg 241  Q
    |||||||||| |||||||| ||||| ||| |||||    
T  121021 aatttccctctctaattttactttttttagtagtg 120987  T

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Target: scaffold0019 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 173456 - 173584
Alignment:
Q  114 atttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaa--tttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||||| ||||||||| ||||| || | ||||||||||||||||||||||||||||||||  |||||||| ||||| || ||||||| ||| |||||    
T  173456 atttagtgagggaaaacataaaatcactctctaattccgtcactaaattttgcgaccaaagaatttttatgagaaatttcattttttccgtcactaattt 173555  T
Q  212 ccctccctaattttgcttttcttaatagtg 241  Q
     |||| ||||||||||||||  ||||||||    
T  173556 -cctcgctaattttgctttttctaatagtg 173584  T

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Target: scaffold0655 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 3294 - 3172
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    ||||||||||||| |  ||||||| ||||||||||   |||||| ||||||||||||||||||||   ||||| ||||||| ||||| ||||||| |||     
T  3294 gagggaaatttagag--ggaaaacgtgaaatccctcactaattctgtcactaaattttgcgaccatgaaatttgtgaggaactttatcttttccgtcact 3197  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||||||||||||||||| |||||    
T  3196 aatttccctccctaatttttctttt 3172  T

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Target: scaffold0062 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 231
Target Start/End: Original strand, 43917 - 44046
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||| ||||||||||| ||||||| | |||| | | | ||||||||| | ||||||||||||||||||||||| |||||||||| || ||||||     
T  43917 ttagtgaggaaaatttagtgagggaaaacgtaaaattcttctctaattccgttattaaattttgcgaccaaagaatttgtgaggaatttcattttttcca 44016  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| |||||||| |||||    
T  44017 tcactaatttccctcgctaatttttctttt 44046  T

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Target: scaffold0161 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 6801 - 6924
Alignment:
Q  108 agggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaa 207  Q
    ||||||||||||||| |||||||||||||| ||| | ||||||||||| |||||||||| || ||  |||||  || |||||| || ||||||| ||  |    
T  6801 agggaaatttagtgagggaaaacatgaaattcctctctaattccgtcattaaattttgcaacgaagaaatttgcgaagaatttcattttttccgtcaata 6900  T
Q  208 atttccctccctaattttgctttt 231  Q
    ||||||||| ||||||||||||||    
T  6901 atttccctcgctaattttgctttt 6924  T

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Target: scaffold0035 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 74845 - 74731
Alignment:
Q  114 atttagtgaaggaaaa-catgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttc 212  Q
    ||||||||| |||||| |||||||||||| | |||||| ||||||||||||| |||||| ||||||| |||| ||||| || ||||||| ||| ||||||    
T  74845 atttagtgagggaaaaacatgaaatccctctctaattctgtcactaaattttacgaccagagaatttgtgagaaatttcattttttccgtcactaatttc 74746  T
Q  213 cctccctaattttgc 227  Q
    |||  ||||||||||    
T  74745 ccttgctaattttgc 74731  T

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Target: scaffold0023 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 39842 - 39713
Alignment:
Q  102 ttagagagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    |||| |||||||||||  ||| ||||||| ||||||| || | |||||||||||||||||||||| ||||   |||||  ||||||||| || ||||||     
T  39842 ttagtgagggaaattttatgagggaaaacgtgaaatctctctctaattccgtcactaaattttgcaaccatgaaatttgggaggaatttcattttttcca 39743  T
Q  202 acacaaatttccctccctaattttgctttt 231  Q
     ||| |||||||||| ||||||||||||||    
T  39742 tcactaatttccctcgctaattttgctttt 39713  T

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Target: scaffold0184 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 7461 - 7585
Alignment:
Q  107 gagggaaatttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacaca 206  Q
    |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||| |||||||| || || ||| ||| |||||| || ||||||| |||     
T  7461 gagggaaatttagtgagggaaaacgtgaaatccctctctaattctgtcactaaactttgcgactaaggattttgtgaagaatttcattttttccgtcact 7560  T
Q  207 aatttccctccctaattttgctttt 231  Q
    ||||| ||||  ||||||| |||||    
T  7561 aattttcctcgttaattttactttt 7585  T

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Target: scaffold0284 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 211
Target Start/End: Complemental strand, 1644 - 1549
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| ||||||||| |||| | |||||  || |||||||||||||||||| |||||||||||| ||||||| ||||||| ||| |||||    
T  1644 ttagtgagggataacatgaaacccctctctaattatgttactaaattttgcgaccaaggaatttatgagggattttattttttccgtcactaattt 1549  T

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Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 231
Target Start/End: Complemental strand, 17705 - 17627
Alignment:
Q  153 tcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgctttt 231  Q
    |||||||| ||||||||||| |||||| |||||||||| || ||||||| ||| |||||||||| ||||||||| ||||    
T  17705 tcactaaagtttgcgaccaaggaatttgtgaggaatttcattttttccgtcactaatttccctcgctaattttgttttt 17627  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 22145 - 22228
Alignment:
Q  157 taaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccctccctaattttgcttttcttaatagt 240  Q
    |||| ||||||| |||| |||||||||| |||||||| ||||||  ||| ||||||||||||| |||||| ||||| |||||||    
T  22145 taaagtttgcgatcaaaaaatttatgagaaattttattttttccctcactaatttccctccctgattttgtttttcctaatagt 22228  T

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Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 231
Target Start/End: Original strand, 439977 - 440092
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaatttccct 215  Q
    ||||||| ||||||  | |||||||| | |||||||||||||||||||||||| |||  ||||| |||||||||| || ||||||| ||| ||| | |||    
T  439977 ttagtgagggaaaatgtaaaatccctctctaattccgtcactaaattttgcgatcaagaaatttgtgaggaatttcattttttccgtcactaatattcct 440076  T
Q  216 ccctaattttgctttt 231  Q
      |||||||| |||||    
T  440077 tgctaattttactttt 440092  T

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Target: scaffold0114 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 211
Target Start/End: Original strand, 36316 - 36411
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccgacacaaattt 211  Q
    ||||||| ||| ||||||||||| || | |||||  || ||||||||||| |||||| |||||||||| | ||||||| ||||||| ||| |||||    
T  36316 ttagtgagggataacatgaaatctctctctaattatgttactaaattttgtgaccaaggaatttatgatggattttattttttccgtcactaattt 36411  T

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Target: scaffold0211 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 201
Target Start/End: Complemental strand, 19263 - 19178
Alignment:
Q  116 ttagtgaaggaaaacatgaaatccctttataattccgtcactaaattttgcgaccaaagaatttatgaggaattttatgttttccg 201  Q
    ||||||| ||| |||||||||||||| | |||||  ||  |||||||||||||||||  || |||||||  ||||||| |||||||    
T  19263 ttagtgagggataacatgaaatccctctctaattatgtttctaaattttgcgaccaagaaaattatgagagattttattttttccg 19178  T

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