View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19099_high_43 (Length: 216)
Name: NF19099_high_43
Description: NF19099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19099_high_43 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 7232827 - 7232920
Alignment:
| Q |
18 |
catctcaccagcataggagagttttcattctctttgattttgatcctaagacacctcctaaggttaaaattcttatctacactctgatcattag |
111 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7232827 |
catctcaccagcataggagagttttcattctctttgattttgatcctaagacacctcctaaggttaaaattcttatctacactctgatcattag |
7232920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University