View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19099_low_27 (Length: 291)
Name: NF19099_low_27
Description: NF19099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19099_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 7 - 273
Target Start/End: Original strand, 38172987 - 38173253
Alignment:
| Q |
7 |
tgaagcagcacagaataaaactcaactttcatcttccaaccacatgtaccatataacacattaacaacaaaagataaaaacttatatgttgattctatct |
106 |
Q |
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||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38172987 |
tgaagcaacatagaataaaactcaaccttcatcttccaaccacatgtaccatataacacattaacaacaaaagataaaaacttatatgttgattctatct |
38173086 |
T |
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| Q |
107 |
aactttcttcaatcctcctaacaaagtttcaaaataaaatattgaagactgaactcaacagatcaaaagccaaccttcaacatttcaaccagtcaaagta |
206 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
38173087 |
aactttcttcaatcctcctaacaaagcttcaaaataaaatattgaagactgaactcaacagatcaaaagccaaccttcaacagttcaaccagtcaaagta |
38173186 |
T |
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| Q |
207 |
tataatctatcaattcagattcatctgttggcacagaagcatagtgggatcagaaccacaggattca |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38173187 |
tataatctatcaattcagattcatctgttggcacagaagcatagtgggatcagaaccacaggattca |
38173253 |
T |
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