View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19099_low_40 (Length: 241)
Name: NF19099_low_40
Description: NF19099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19099_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 14133623 - 14133435
Alignment:
| Q |
19 |
ccacattgctgcaaaagcccctcatgataatacggtttccataaaatttatttggaacctacatgattatgcatgactcatgcgaatcttagataataaa |
118 |
Q |
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| T |
14133623 |
ccacattgctgcaaaagcccctcaagataacacggtttccataaaatttatttggaacctagatgattatgcatgagtcatgcgaatcttaaataataaa |
14133524 |
T |
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| Q |
119 |
gtgaacagatattgtaattgcctaactaaatgagtcgagtataagaacattttaacacaataatcaaagcatcttggttgagttattaa |
207 |
Q |
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| T |
14133523 |
gagaataaatattgtaattgcctaactaaatgagtggagtataagaaccttttaacacaataatcaaagcatcttggttgagttattaa |
14133435 |
T |
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