View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1909_high_10 (Length: 223)
Name: NF1909_high_10
Description: NF1909
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1909_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 46179557 - 46179744
Alignment:
| Q |
20 |
atttggagaaagaaaataacaacactgcagtgtactctaaagaaaacacgacagtgaagatagtagttctccaccctccgattaaatagaaagtgaaaaa |
119 |
Q |
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| T |
46179557 |
atttggagaaagaaaataacaacactgcagtgtactttaaagaaaacacgacagtgaagatagtagttctccaccctccgattaaatagaaagtgaaaaa |
46179656 |
T |
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| Q |
120 |
acaaaactttaaagtaaacacaaacagtaggctctgattatattgtgaaaatattttatatatttcttttttaaattgcgttaacttt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46179657 |
acaaaactttaaagtaaacacaaacagtaggctctgattatattgtgaaaatattttatatatttcttttttaaattgcgttaacttt |
46179744 |
T |
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