View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19100_high_5 (Length: 398)

Name: NF19100_high_5
Description: NF19100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19100_high_5
NF19100_high_5
[»] chr7 (54 HSPs)
chr7 (20-380)||(29916770-29917130)
chr7 (260-322)||(4937416-4937478)
chr7 (260-322)||(11276536-11276598)
chr7 (260-322)||(17721425-17721487)
chr7 (257-321)||(4078064-4078128)
chr7 (251-319)||(34232482-34232550)
chr7 (199-321)||(18768137-18768259)
chr7 (255-321)||(19735303-19735369)
chr7 (260-322)||(23054258-23054320)
chr7 (260-322)||(29968764-29968826)
chr7 (259-322)||(36227439-36227502)
chr7 (251-321)||(13440839-13440909)
chr7 (257-319)||(41340336-41340398)
chr7 (262-319)||(2820012-2820069)
chr7 (264-321)||(34791964-34792021)
chr7 (257-322)||(45871550-45871615)
chr7 (257-322)||(46626609-46626674)
chr7 (53-109)||(22760888-22760944)
chr7 (257-321)||(45993363-45993427)
chr7 (257-320)||(18671958-18672021)
chr7 (262-321)||(28740224-28740283)
chr7 (56-102)||(13106780-13106825)
chr7 (260-310)||(31423384-31423434)
chr7 (272-322)||(45164835-45164885)
chr7 (53-102)||(49050486-49050535)
chr7 (262-322)||(6335680-6335740)
chr7 (257-309)||(17195276-17195328)
chr7 (255-319)||(39930887-39930951)
chr7 (282-321)||(22819006-22819045)
chr7 (260-319)||(27218413-27218472)
chr7 (257-320)||(28173273-28173336)
chr7 (59-102)||(45709709-45709752)
chr7 (262-300)||(4344642-4344680)
chr7 (56-102)||(7721401-7721447)
chr7 (56-102)||(9608627-9608673)
chr7 (56-102)||(9836199-9836245)
chr7 (56-102)||(17041010-17041056)
chr7 (56-102)||(26459408-26459454)
chr7 (53-86)||(18891041-18891074)
chr7 (56-109)||(23552143-23552196)
chr7 (56-109)||(25655226-25655279)
chr7 (264-309)||(33820860-33820905)
chr7 (53-102)||(38374594-38374643)
chr7 (20-109)||(41519226-41519315)
chr7 (257-309)||(7288133-7288185)
chr7 (257-309)||(13063106-13063158)
chr7 (56-96)||(14058291-14058331)
chr7 (56-96)||(14368319-14368359)
chr7 (56-92)||(17113837-17113873)
chr7 (20-76)||(25132340-25132396)
chr7 (58-110)||(28646990-28647041)
chr7 (20-75)||(37473673-37473729)
chr7 (56-108)||(42262093-42262145)
chr7 (56-92)||(43215226-43215262)
[»] chr8 (40 HSPs)
chr8 (197-321)||(23942814-23942938)
chr8 (260-322)||(7925176-7925238)
chr8 (257-322)||(7453139-7453204)
chr8 (260-321)||(13878776-13878837)
chr8 (260-321)||(17700270-17700331)
chr8 (255-320)||(18187930-18187995)
chr8 (260-321)||(36157944-36158005)
chr8 (260-322)||(8300593-8300655)
chr8 (260-322)||(9923391-9923453)
chr8 (260-321)||(20825089-20825151)
chr8 (255-321)||(24794505-24794571)
chr8 (255-319)||(12135008-12135072)
chr8 (255-319)||(43612476-43612540)
chr8 (262-321)||(29721200-29721259)
chr8 (260-323)||(41664655-41664718)
chr8 (261-319)||(6901728-6901786)
chr8 (255-321)||(11393620-11393686)
chr8 (251-321)||(16375392-16375462)
chr8 (251-321)||(17659622-17659692)
chr8 (56-102)||(18540330-18540376)
chr8 (260-322)||(32267344-32267406)
chr8 (54-102)||(19703483-19703531)
chr8 (264-322)||(26774535-26774593)
chr8 (257-322)||(4987353-4987418)
chr8 (251-320)||(45255130-45255199)
chr8 (323-379)||(8445677-8445733)
chr8 (272-320)||(10530462-10530510)
chr8 (257-309)||(14490516-14490568)
chr8 (262-321)||(28453759-28453818)
chr8 (277-319)||(6245891-6245933)
chr8 (274-320)||(25193892-25193938)
chr8 (56-102)||(34628674-34628720)
chr8 (53-99)||(36205230-36205276)
chr8 (272-322)||(36493183-36493233)
chr8 (56-109)||(23361647-23361700)
chr8 (272-309)||(36025323-36025360)
chr8 (260-321)||(42176846-42176907)
chr8 (257-309)||(8445600-8445652)
chr8 (21-84)||(8867478-8867542)
chr8 (257-309)||(13091132-13091184)
[»] chr6 (31 HSPs)
chr6 (251-321)||(15674613-15674683)
chr6 (251-321)||(26206114-26206184)
chr6 (255-320)||(1104237-1104302)
chr6 (251-321)||(649362-649432)
chr6 (263-321)||(21629411-21629469)
chr6 (260-321)||(17577006-17577067)
chr6 (260-321)||(17605623-17605684)
chr6 (260-322)||(2554395-2554457)
chr6 (251-321)||(11060151-11060221)
chr6 (260-322)||(24766702-24766764)
chr6 (255-319)||(21549632-21549696)
chr6 (252-308)||(28575763-28575819)
chr6 (257-320)||(17078357-17078420)
chr6 (260-317)||(13938508-13938565)
chr6 (257-321)||(502821-502885)
chr6 (257-309)||(12913602-12913654)
chr6 (274-321)||(14843426-14843473)
chr6 (274-321)||(25351027-25351074)
chr6 (255-309)||(11469358-11469412)
chr6 (260-321)||(13086333-13086394)
chr6 (264-321)||(13563219-13563276)
chr6 (260-321)||(19350734-19350795)
chr6 (262-319)||(20497678-20497735)
chr6 (328-376)||(2923699-2923747)
chr6 (274-322)||(14686296-14686344)
chr6 (255-315)||(15987802-15987862)
chr6 (54-109)||(34444828-34444883)
chr6 (20-109)||(24641151-24641241)
chr6 (260-321)||(15956265-15956326)
chr6 (260-321)||(18681863-18681924)
chr6 (52-92)||(10338168-10338208)
[»] chr3 (49 HSPs)
chr3 (197-319)||(15481049-15481171)
chr3 (257-321)||(24925974-24926038)
chr3 (260-322)||(2365068-2365130)
chr3 (260-322)||(19919517-19919579)
chr3 (260-321)||(48569312-48569373)
chr3 (262-322)||(52907330-52907390)
chr3 (251-322)||(47538048-47538119)
chr3 (251-321)||(6175766-6175836)
chr3 (260-322)||(34332103-34332165)
chr3 (260-321)||(962452-962513)
chr3 (260-321)||(16179730-16179791)
chr3 (255-319)||(17077588-17077652)
chr3 (197-321)||(36709637-36709760)
chr3 (257-317)||(46907963-46908023)
chr3 (255-321)||(14863745-14863811)
chr3 (255-321)||(21739777-21739843)
chr3 (251-321)||(23819346-23819416)
chr3 (255-321)||(42674727-42674793)
chr3 (260-321)||(12341544-12341605)
chr3 (257-322)||(30166611-30166676)
chr3 (260-317)||(36731683-36731740)
chr3 (257-318)||(50545030-50545091)
chr3 (260-320)||(43120964-43121024)
chr3 (274-321)||(31675735-31675782)
chr3 (56-102)||(30311338-30311384)
chr3 (253-322)||(18381831-18381900)
chr3 (260-321)||(19876033-19876094)
chr3 (260-321)||(19891467-19891528)
chr3 (274-319)||(53942050-53942095)
chr3 (274-322)||(40513012-40513060)
chr3 (282-321)||(8948308-8948347)
chr3 (55-109)||(17035013-17035065)
chr3 (282-321)||(20797919-20797958)
chr3 (263-321)||(10868437-10868495)
chr3 (262-308)||(20367340-20367386)
chr3 (56-102)||(20501728-20501774)
chr3 (56-102)||(28703402-28703448)
chr3 (56-102)||(39253729-39253775)
chr3 (56-102)||(47824147-47824193)
chr3 (272-322)||(52250413-52250463)
chr3 (56-85)||(353155-353184)
chr3 (20-92)||(47454578-47454651)
chr3 (53-109)||(5499402-5499458)
chr3 (262-318)||(8130765-8130821)
chr3 (56-92)||(14186689-14186725)
chr3 (54-102)||(14339642-14339690)
chr3 (56-96)||(19154669-19154709)
chr3 (262-322)||(34830184-34830244)
chr3 (56-92)||(37788463-37788499)
[»] chr2 (39 HSPs)
chr2 (251-321)||(13551363-13551433)
chr2 (255-317)||(25380687-25380749)
chr2 (257-321)||(15018464-15018528)
chr2 (197-320)||(8065551-8065674)
chr2 (199-321)||(28399839-28399961)
chr2 (260-321)||(33515482-33515543)
chr2 (255-321)||(35488623-35488689)
chr2 (260-321)||(14440534-14440595)
chr2 (251-320)||(44028503-44028572)
chr2 (260-321)||(12646340-12646401)
chr2 (53-102)||(37480107-37480156)
chr2 (257-322)||(45422307-45422372)
chr2 (266-322)||(2207110-2207166)
chr2 (262-321)||(10289355-10289414)
chr2 (272-322)||(6724920-6724970)
chr2 (255-321)||(11233778-11233844)
chr2 (54-92)||(23052519-23052557)
chr2 (255-320)||(9668296-9668361)
chr2 (262-319)||(13416478-13416535)
chr2 (56-109)||(19244134-19244187)
chr2 (262-319)||(28253521-28253578)
chr2 (272-321)||(33583717-33583766)
chr2 (59-96)||(38854463-38854500)
chr2 (52-109)||(39715017-39715074)
chr2 (56-96)||(4060212-4060252)
chr2 (54-102)||(29503303-29503351)
chr2 (262-321)||(3153108-3153167)
chr2 (290-321)||(6824231-6824262)
chr2 (257-304)||(28598732-28598779)
chr2 (53-92)||(31681091-31681130)
chr2 (58-109)||(34041588-34041639)
chr2 (29-91)||(4262273-4262335)
chr2 (272-322)||(26147017-26147067)
chr2 (56-102)||(42327393-42327439)
chr2 (272-322)||(43311061-43311111)
chr2 (57-102)||(4438978-4439023)
chr2 (59-96)||(38856163-38856200)
chr2 (56-92)||(11062402-11062438)
chr2 (270-322)||(20004745-20004797)
[»] chr5 (47 HSPs)
chr5 (260-321)||(8299471-8299532)
chr5 (260-319)||(10780991-10781050)
chr5 (185-320)||(26261608-26261742)
chr5 (260-322)||(23239173-23239235)
chr5 (260-322)||(28534964-28535026)
chr5 (260-322)||(30731602-30731664)
chr5 (199-321)||(38358196-38358318)
chr5 (260-322)||(42514510-42514572)
chr5 (260-321)||(27796274-27796335)
chr5 (257-321)||(22094538-22094602)
chr5 (255-321)||(35121977-35122043)
chr5 (260-321)||(25856728-25856789)
chr5 (255-319)||(19506783-19506847)
chr5 (251-321)||(6050021-6050091)
chr5 (260-322)||(33170448-33170510)
chr5 (260-322)||(35983079-35983141)
chr5 (255-316)||(6885699-6885759)
chr5 (262-319)||(22438010-22438067)
chr5 (260-321)||(29572159-29572220)
chr5 (260-321)||(29573536-29573597)
chr5 (260-321)||(29574913-29574974)
chr5 (260-321)||(29576290-29576351)
chr5 (260-321)||(29577667-29577728)
chr5 (260-321)||(29579044-29579105)
chr5 (255-321)||(19838349-19838416)
chr5 (251-317)||(34481729-34481795)
chr5 (53-102)||(84856-84905)
chr5 (272-321)||(20208009-20208058)
chr5 (260-321)||(30509312-30509373)
chr5 (260-321)||(30549655-30549716)
chr5 (257-321)||(42260069-42260133)
chr5 (56-99)||(43442231-43442274)
chr5 (255-321)||(588292-588358)
chr5 (272-322)||(21084683-21084733)
chr5 (272-322)||(36256577-36256627)
chr5 (262-308)||(40035957-40036003)
chr5 (21-95)||(40461576-40461650)
chr5 (56-109)||(16773832-16773885)
chr5 (284-321)||(33385262-33385299)
chr5 (257-309)||(478950-479002)
chr5 (54-82)||(3315267-3315295)
chr5 (56-92)||(14285203-14285239)
chr5 (257-309)||(15829883-15829935)
chr5 (257-321)||(15861974-15862038)
chr5 (56-92)||(25627099-25627135)
chr5 (56-92)||(25979212-25979248)
chr5 (56-92)||(35360084-35360120)
[»] chr4 (43 HSPs)
chr4 (257-321)||(29553090-29553154)
chr4 (257-320)||(19115223-19115286)
chr4 (260-322)||(23641879-23641941)
chr4 (260-322)||(23647537-23647599)
chr4 (199-321)||(26694657-26694779)
chr4 (251-321)||(34976722-34976792)
chr4 (260-321)||(1827829-1827890)
chr4 (251-320)||(42779031-42779100)
chr4 (260-321)||(48312884-48312945)
chr4 (260-321)||(54482449-54482510)
chr4 (257-321)||(19733277-19733341)
chr4 (251-321)||(20675816-20675886)
chr4 (251-321)||(23872766-23872836)
chr4 (255-321)||(42952820-42952886)
chr4 (251-321)||(55299402-55299472)
chr4 (251-320)||(20396363-20396432)
chr4 (260-321)||(47419594-47419655)
chr4 (257-320)||(8935861-8935924)
chr4 (260-322)||(19756057-19756119)
chr4 (260-322)||(19783687-19783749)
chr4 (257-322)||(7662596-7662661)
chr4 (260-313)||(15741010-15741063)
chr4 (272-320)||(10562614-10562662)
chr4 (257-309)||(37872000-37872052)
chr4 (28-102)||(39509102-39509177)
chr4 (54-109)||(47044742-47044797)
chr4 (272-322)||(19162457-19162507)
chr4 (251-321)||(53486218-53486288)
chr4 (257-322)||(19648482-19648547)
chr4 (260-321)||(55724996-55725057)
chr4 (262-322)||(38296497-38296557)
chr4 (58-102)||(38869800-38869844)
chr4 (323-379)||(43497923-43497979)
chr4 (274-322)||(43516036-43516084)
chr4 (20-102)||(30938180-30938263)
chr4 (262-309)||(40434020-40434067)
chr4 (53-92)||(46295139-46295178)
chr4 (56-102)||(23377988-23378034)
chr4 (56-102)||(37109349-37109395)
chr4 (272-320)||(40688882-40688931)
chr4 (56-92)||(7949452-7949488)
chr4 (257-309)||(18871017-18871069)
chr4 (56-92)||(49576892-49576928)
[»] scaffold0472 (1 HSPs)
scaffold0472 (260-322)||(4042-4104)
[»] scaffold0034 (1 HSPs)
scaffold0034 (260-322)||(105131-105193)
[»] chr1 (52 HSPs)
chr1 (260-322)||(6051393-6051455)
chr1 (260-322)||(35541824-35541886)
chr1 (251-321)||(5497867-5497937)
chr1 (255-321)||(20796445-20796511)
chr1 (272-321)||(17708860-17708909)
chr1 (260-321)||(32352601-32352662)
chr1 (257-320)||(7396010-7396073)
chr1 (262-321)||(33259991-33260050)
chr1 (262-321)||(33280150-33280209)
chr1 (262-321)||(47622366-47622425)
chr1 (255-321)||(39431071-39431137)
chr1 (251-321)||(48072715-48072785)
chr1 (255-321)||(49264254-49264320)
chr1 (272-321)||(26721435-26721484)
chr1 (56-109)||(51814519-51814572)
chr1 (257-321)||(25504281-25504345)
chr1 (257-309)||(34548062-34548114)
chr1 (257-321)||(43943766-43943830)
chr1 (274-321)||(3544390-3544437)
chr1 (257-320)||(10710494-10710556)
chr1 (262-321)||(48434942-48435001)
chr1 (257-319)||(3074531-3074593)
chr1 (276-322)||(5809387-5809433)
chr1 (56-102)||(15786318-15786364)
chr1 (260-322)||(19042913-19042975)
chr1 (56-109)||(12587295-12587348)
chr1 (262-319)||(19014274-19014331)
chr1 (53-102)||(19528322-19528371)
chr1 (274-319)||(28358695-28358740)
chr1 (56-92)||(1247155-1247191)
chr1 (290-322)||(51052701-51052733)
chr1 (56-99)||(2799897-2799940)
chr1 (282-321)||(30650308-30650347)
chr1 (262-321)||(33142497-33142556)
chr1 (53-92)||(39966135-39966174)
chr1 (56-102)||(8177180-8177226)
chr1 (329-379)||(12690214-12690264)
chr1 (56-102)||(22049826-22049872)
chr1 (56-98)||(33700771-33700813)
chr1 (56-109)||(4280449-4280502)
chr1 (56-109)||(8904439-8904492)
chr1 (56-109)||(14787334-14787387)
chr1 (20-92)||(24047063-24047136)
chr1 (52-109)||(27223124-27223181)
chr1 (53-82)||(45266886-45266915)
chr1 (272-321)||(45271043-45271092)
chr1 (56-96)||(2220010-2220050)
chr1 (56-92)||(3265966-3266002)
chr1 (274-322)||(13867128-13867176)
chr1 (257-309)||(15174587-15174639)
chr1 (290-322)||(20987975-20988007)
chr1 (52-92)||(38947466-38947506)
[»] scaffold0112 (1 HSPs)
scaffold0112 (197-322)||(14949-15074)
[»] scaffold0007 (1 HSPs)
scaffold0007 (257-321)||(182902-182966)
[»] scaffold1350 (1 HSPs)
scaffold1350 (260-321)||(334-395)
[»] scaffold0418 (1 HSPs)
scaffold0418 (257-322)||(8391-8456)
[»] scaffold1809 (1 HSPs)
scaffold1809 (269-317)||(1093-1141)
[»] scaffold0291 (1 HSPs)
scaffold0291 (52-100)||(2464-2512)
[»] scaffold0179 (2 HSPs)
scaffold0179 (276-321)||(8338-8383)
scaffold0179 (276-321)||(13272-13317)
[»] scaffold0194 (1 HSPs)
scaffold0194 (56-99)||(13044-13087)
[»] scaffold0048 (1 HSPs)
scaffold0048 (262-321)||(63589-63648)
[»] scaffold0299 (1 HSPs)
scaffold0299 (56-102)||(11560-11606)
[»] scaffold0131 (1 HSPs)
scaffold0131 (251-321)||(3837-3907)
[»] scaffold0016 (1 HSPs)
scaffold0016 (272-322)||(28576-28626)


Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-171; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 20 - 380
Target Start/End: Original strand, 29916770 - 29917130
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacatggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaatcctaacaaag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  29916770 gaagaagttaaattaaccaacctaaatcaacatggggagaatcgaacctgagaccttgaggaggagcacactcttagatcccacgtcaatcctaacaaag 29916869  T
Q  120 caatgctaaactccctcatctgccttaacccccatactaatgttttatcaaacaaatatttttccaaacaaatatttttccaaccaatccaagtactttt 219  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29916870 caatgttaaactccctcatctgccttaacccccaaacaaatgttttaccaaacaaatatttttccaaacaaatatttttccaaccaatccaagtactttt 29916969  T
Q  220 tctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29916970 tctaagatcctcacttccaccctaaaaaaaattaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 29917069  T
Q  320 ggtgacatactttaggagaactagacaaccaccaaaagaaagaaatctactcttccaaccg 380  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29917070 tgtgacatactttaggagaactagacaaccaccaaaagaaagaaatctactcttccaaccg 29917130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 4937478 - 4937416
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  4937478 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 4937416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 11276598 - 11276536
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  11276598 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 11276536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 17721425 - 17721487
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  17721425 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 17721487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 4078064 - 4078128
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||| |||||||||| ||||||| |||||| ||||||||||||| |||||||||||    
T  4078064 aataaagattcaaaagaagagattatacctgatggagctctgaagaaggaaagcgcatagacagg 4078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 34232482 - 34232550
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||| |||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  34232482 ttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagaca 34232550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 18768137 - 18768259
Alignment:
Q  199 ccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctttg 298  Q
    |||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||| ||  |||||||||    
T  18768137 ccaacctatccaagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacttgttggagctttg 18768236  T
Q  299 aagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| |||||||||||    
T  18768237 aagaaagaaagagcatagacagg 18768259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 19735303 - 19735369
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  19735303 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 19735369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 23054320 - 23054258
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| |||||||  ||||||| ||||||||||||||||||||||||    
T  23054320 aaagattcaatggaagagattatacctgacagagctttaaagaaggaaagtgcatagacaggt 23054258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 29968764 - 29968826
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  29968764 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacaggt 29968826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 36227502 - 36227439
Alignment:
Q  259 taaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||| ||||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  36227502 taaagattcaatggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 36227439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 13440839 - 13440909
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||||| |||||||| |||||| ||||||  |||||||||||||||||||| |||||||||||    
T  13440839 ttaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacagg 13440909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 41340336 - 41340398
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||| ||||||||| ||||| | | |||||||||||||||||| |||||||||    
T  41340336 aataaagattcaatggaagagattataccttacgaagctttgaagaaggaaagggcatagaca 41340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 2820069 - 2820012
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||||  ||||||||    
T  2820069 agattcaatagaagagattatacctgacggggctttgaagaaggaaagaacatagaca 2820012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 34792021 - 34791964
Alignment:
Q  264 attcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||| | |||  |||||||||||||||||||||||||||| |||||||||||    
T  34792021 attcaatagaggcgatgatacctgagggagctttgaagaaggaaagggcatagacagg 34791964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 45871550 - 45871615
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||| ||||||||||||||| ||  ||||||| |||||||||||||||||||| ||||| ||||||    
T  45871550 aatatagattcaatagaagaaataatacctgaaggagctttgaagaaggaaagagcataaacaggt 45871615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 46626609 - 46626674
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||||||| || |||| |||||||||||||| ||||| ||||||||||||    
T  46626609 aataaagattcaagggaagagattatatctgatggagctttgaagaaagaaagggcatagacaggt 46626674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 22760944 - 22760888
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||||||||||| || |||||| ||| ||||| ||||||    
T  22760944 ggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaat 22760888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 45993363 - 45993427
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||  | ||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  45993363 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 45993427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 18671958 - 18672021
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||||||||| ||||||||| |||||||   ||||||||||||||||||  |||||||||    
T  18671958 aataaagattcaatggaagagattatacctgatatagctttgaagaaggaaagatcatagacag 18672021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 28740283 - 28740224
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||| | |||| ||||| |||||||||||||||||||||| ||||| |||||    
T  28740283 agattcaatagatgggattatacctaagggagctttgaagaaggaaagagcataaacagg 28740224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 13106780 - 13106825
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||    
T  13106780 gagaatcgaacctgagaccttgaggaggagtacactc-cagatccca 13106825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 310
Target Start/End: Original strand, 31423384 - 31423434
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagt 310  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||    
T  31423384 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagt 31423434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 45164885 - 45164835
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||||||  ||||| |||||||||||||| ||||||||||||    
T  45164885 gaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggt 45164835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 49050486 - 49050535
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||||||||  ||||| ||||||||| |||||||||    
T  49050486 ggggagaatcgaacctgagacctcaaggaggagtacactcgcagatccca 49050535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 6335740 - 6335680
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||| || ||||||||||||| ||  ||||| |||||||||||||| ||||||||||||    
T  6335740 agattctatggaagagattgtacatgctggagccttgaagaaggaaagagcatagacaggt 6335680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 17195276 - 17195328
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||  ||||||  ||||||||||||||||||||    
T  17195276 aataaagattcaatagaagaaatgatacctgcaggagctttgaagaaggaaag 17195328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 39930951 - 39930887
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||| |||  || ||||||||| ||| ||| |||||||||||||||||||| |||||||||    
T  39930951 tcaataaatattttatggaagagattatacatgatggagctttgaagaaggaaagagcatagaca 39930887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 22819045 - 22819006
Alignment:
Q  282 tacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| |||||| |||||||||||||||||||||||||    
T  22819045 tacctgatggagctctgaagaaggaaagtgcatagacagg 22819006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 27218472 - 27218413
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||   ||| ||| ||||||| ||||| ||||||||||||||||||||||||    
T  27218472 aaagattcaatgagagaaattatacctgacggagccttgaagaaggaaagtgcatagaca 27218413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 28173336 - 28173273
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||||||||| ||||||||  || |||| ||||||||||||||  |||| ||||||||||    
T  28173336 aataaagattcaatggaagagataatatctgacggagctttgaagaaaaaaagagcatagacag 28173273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 45709709 - 45709752
Alignment:
Q  59 aatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||| |||||| || ||||||||||||||||    
T  45709709 aatcgaacctgagacctcgaggaggagcacactctcagatccca 45709752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 4344642 - 4344680
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaa 300  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  4344642 agattcaatagaagagattatacatgagggagctttgaa 4344680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 7721447 - 7721401
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||| ||||||||||||||| ||||||||| ||| |||||    
T  7721447 gagaatcgaacatgagaccttgaggaggagtacactcccaggtccca 7721401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 9608627 - 9608673
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||| ||||||||| || |||||| |||||||||    
T  9608627 gagaatcgaacctgagatcttgaggaggaggacactcccagatccca 9608673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 9836199 - 9836245
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||| ||||||||| || |||||| |||||||||    
T  9836199 gagaatcgaacctgagatcttgaggaggaggacactcccagatccca 9836245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 17041010 - 17041056
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||  |||||||||    
T  17041010 gagaatcgaacctgagaccttgaggaggagcacacttccagatccca 17041056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 26459408 - 26459454
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||||    
T  26459408 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 26459454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 86
Target Start/End: Complemental strand, 18891074 - 18891041
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagt 86  Q
    |||||||||| |||||||||||||||||||||||    
T  18891074 ggggagaatcaaacctgagaccttgaggagaagt 18891041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 23552196 - 23552143
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||| ||||||||||||||| || |||||| ||| ||||| ||||||    
T  23552196 gagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaat 23552143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 25655226 - 25655279
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||||||| ||||||||||| |  |||||| ||||||||| ||||||    
T  25655226 gagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaat 25655279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 33820905 - 33820860
Alignment:
Q  264 attcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||||    
T  33820905 attcaatggaagagataatacctgatggagctttgaagaaggaaag 33820860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 38374594 - 38374643
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||| ||||||||||||| || ||||||| || |||||    
T  38374594 ggggagaatcgaacctaagaccttgaggaggagcacactctaaggtccca 38374643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 41519226 - 41519315
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacatggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||| ||||||| || ||||||||  |||  | ||||| ||||||||||||||||||||| || ||||||  | |||||| ||||||    
T  41519226 gaagaagctaaattagcccacctaaattgacacagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaat 41519315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 7288133 - 7288185
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||| ||||||||||||||| ||| |||||| ||| || ||||||||||||||    
T  7288133 aatatagattcaatagaagaaattatacctgtgggtgccttgaagaaggaaag 7288185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 13063158 - 13063106
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||| ||||||  || |||||||| ||||||||    
T  13063158 aataaagattcaatagaagaaattatacctgcaggggctttgaaaaaggaaag 13063106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 14058331 - 14058291
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  14058331 gagaatcgaacctgagaccttgaggatgagcacactctcag 14058291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 14368359 - 14368319
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    ||||||||||||||||||||||||||  || ||||||||||    
T  14368359 gagaatcgaacctgagaccttgaggatgagcacactctcag 14368319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 17113873 - 17113837
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  17113873 gagaatcgaacttgagaccttgaggagaagcacactc 17113837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 25132340 - 25132396
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacatggggagaatcgaacctgagacctt 76  Q
    ||||||| ||||||| || ||| |||| | ||| |||||||||||||||||||||||    
T  25132340 gaagaagctaaattagcccacccaaattagcattgggagaatcgaacctgagacctt 25132396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 28647041 - 28646990
Alignment:
Q  58 gaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaatc 110  Q
    ||||||||||||||||||||| |||||| ||||||  |||||||| |||||||    
T  28647041 gaatcgaacctgagaccttga-gagaagcacactccaagatcccaagtcaatc 28646990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 37473729 - 37473673
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacatg-gggagaatcgaacctgagacct 75  Q
    ||||||| |||||||||| ||||||||  ||||  ||||||||||||||||||||||    
T  37473729 gaagaagctaaattaacccacctaaattgacattagggagaatcgaacctgagacct 37473673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 42262093 - 42262145
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaa 108  Q
    |||||| ||| |||||||||| ||||| || |||||||||||||||| |||||    
T  42262093 gagaattgaatctgagacctttaggaggagcacactctcagatcccaagtcaa 42262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 43215262 - 43215226
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  43215262 gagaatcgaacctgagaccttgaggaggagcacactc 43215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 23942814 - 23942938
Alignment:
Q  197 ttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctt 296  Q
    |||||||| ||||||| | ||||||||| ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||| ||| |||||||    
T  23942814 ttccaacctatccaagaaatttttctaaaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacatgatggagctt 23942913  T
Q  297 tgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||| |||||||||||    
T  23942914 tgaagaaggaaagagcatagacagg 23942938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 7925176 - 7925238
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  7925176 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 7925238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 7453139 - 7453204
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  7453139 aataaagattcaagggaagagattatacctgatggagctttgaagaaagaaagtgcatagacaggt 7453204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 13878837 - 13878776
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  13878837 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 13878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 17700270 - 17700331
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| || |||| ||||||||||| ||||||||||||||||||||    
T  17700270 aaagattcaatagaagagattatatctgacggagctttgaaaaaggaaagtgcatagacagg 17700331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 320
Target Start/End: Original strand, 18187930 - 18187995
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  18187930 tcaataaaaatttaatagaagagattgtacctgacggagctttgaagatggaaagagcatagacag 18187995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 36157944 - 36158005
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  36157944 aaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagg 36158005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 8300593 - 8300655
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  ||||||||||| |||||||||||||||||||||    
T  8300593 aaagattcaatggaagagattatacctgccggagctttgaaaaaggaaagtgcatagacaggt 8300655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 9923391 - 9923453
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||| ||||||||||    
T  9923391 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgtatagacaggt 9923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 20825089 - 20825151
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttg-aagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||||    
T  20825089 aaagattcaatagaagagattatacctgacggagctttgaaaaaaggaaagtgcatagacagg 20825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 24794505 - 24794571
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  24794505 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 24794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 12135008 - 12135072
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||||| ||||||||| |||| || | |||||| |||||||||||||||||||||    
T  12135008 tcaataaagattcaatggaagagattatacccgatgaagctttaaagaaggaaagtgcatagaca 12135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 43612540 - 43612476
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| |||||||||    
T  43612540 tcaataaagattcaatggaagagattatacctgatggagctttcaagaatgaaagggcatagaca 43612476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 29721259 - 29721200
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  29721259 agattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 29721200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Complemental strand, 41664718 - 41664655
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggtg 323  Q
    ||||||||||| ||| ||||| ||||||| ||||||||||| ||||||||||| ||||||||||    
T  41664718 aaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagtgcgtagacaggtg 41664655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 6901728 - 6901786
Alignment:
Q  261 aagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||| ||||||||| ||||| | |||||||||||||||||||| |||||||||    
T  6901728 aagattcaatggaagagattatacctaatggagctttgaagaaggaaagggcatagaca 6901786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 11393686 - 11393620
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| |||||||||||    
T  11393686 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaatgaaagagcatagacagg 11393620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 16375462 - 16375392
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || |||||||||||||| |||||| ||||||  |||| ||||||||||||||||| |||||||||    
T  16375462 ttaattaacaaagattcaatagaggagattatacctgttggaggtttgaagaaggaaagtgtatagacagg 16375392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 17659622 - 17659692
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| ||||| ||||||||| ||| ||| |||||||| ||||||||||| |||||||||||    
T  17659622 ttaataaataaagaatcaatggaagagattatacttgatggagcttttaagaaggaaagcgcatagacagg 17659692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 18540376 - 18540330
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  18540376 gagaatcgaacctgagaccttgaggagaagtacactcccaggtccca 18540330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 32267344 - 32267406
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| |||||||   ||||||||| |||||||||||||||||||||    
T  32267344 aaagattcaatggaagagattatacctgacaaagctttgaaaaaggaaagtgcatagacaggt 32267406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 54 - 102
Target Start/End: Original strand, 19703483 - 19703531
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||||| || |||||||||| |||||    
T  19703483 gggagaatcgaacctgagaccttgaggaggagcacactctcaggtccca 19703531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 26774593 - 26774535
Alignment:
Q  264 attcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||| || ||||||| ||||    
T  26774593 attcaatagaagagattatacatgacggagctttgaagaaggagagagcatagataggt 26774535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 4987418 - 4987353
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  | ||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  4987418 aataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggt 4987353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 45255199 - 45255130
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||| ||||||||   ||| ||||||||| ||||||| |||||||||||||| ||||| ||||||||||    
T  45255199 ttaataaataaagaactaatggaagagattatacctgatggagctttgaagaatgaaagcgcatagacag 45255130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 8445677 - 8445733
Alignment:
Q  323 gacatactttaggagaactagacaaccaccaaaagaaagaaatctactcttccaacc 379  Q
    |||| ||||||||||||||| || |||||| |||||||||  |||||||||||||||    
T  8445677 gacagactttaggagaactaaacgaccacccaaagaaagatttctactcttccaacc 8445733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 10530462 - 10530510
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||| ||||    
T  10530462 gaagagattatacctgaaggagctttgaaaaaggaaagtgcataaacag 10530510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 14490516 - 14490568
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||  | ||| |||||||||||||| |||||||||||||||||    
T  14490516 aataaagattcaagggtagaaattgtacctgagggggctttgaagaaggaaag 14490568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 28453818 - 28453759
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||| ||| |||||| ||||||||||||||||||| || ||||| || ||||||||    
T  28453818 agattcaagagatgagattatacctgagggagctttgaaaaaagaaagggcgtagacagg 28453759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 319
Target Start/End: Original strand, 6245891 - 6245933
Alignment:
Q  277 gattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||| ||||||| |||||||||||||||||||| |||||||||    
T  6245891 gattatacctgacggagctttgaagaaggaaagagcatagaca 6245933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 320
Target Start/End: Original strand, 25193892 - 25193938
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||||| |||||||  ||||||||||||||||||| ||||||||||    
T  25193892 agagattatacctgacagagctttgaagaaggaaagagcatagacag 25193938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 34628720 - 34628674
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||||    
T  34628720 gagaatcgaacctgagactttgaggagaaacacactcccagatccca 34628674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 36205276 - 36205230
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatc 99  Q
    |||||||||||||| ||||||||||||||| || |||||| ||||||    
T  36205276 ggggagaatcgaacatgagaccttgaggaggagcacactcccagatc 36205230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 36493183 - 36493233
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  36493183 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 36493233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 23361647 - 23361700
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||| |||||||||||||||||||| || |||||| || |||||| ||||||    
T  23361647 gagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaat 23361700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 309
Target Start/End: Original strand, 36025323 - 36025360
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  36025323 gaagagattatacctgacggagctttgaagaaggaaag 36025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 42176907 - 42176846
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||| |||| |||| |||||||   ||||||||| ||||||||||||||||||||    
T  42176907 aaagatttaatggaagggattatacctgaaaaagctttgaaaaaggaaagtgcatagacagg 42176846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 8445600 - 8445652
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||| ||||||||| ||||| ||  ||||||| ||||||||||||||||||||    
T  8445600 aatatagattcaatggaagaaatgatacctgaaggagctttgaagaaggaaag 8445652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 8867542 - 8867478
Alignment:
Q  21 aagaagttaaattaaccaacctaaatcaacatgg-ggagaatcgaacctgagaccttgaggagaa 84  Q
    |||||| |||||||||| ||||| ||  |||| | ||||||| ||||||||||||||||||||||    
T  8867542 aagaagctaaattaacccacctacattgacattgaggagaatggaacctgagaccttgaggagaa 8867478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 13091132 - 13091184
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||  ||| || | |||||||||||||||||||    
T  13091132 aataaagattcaatagaagaaatgatacgtgcgagagctttgaagaaggaaag 13091184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 15674613 - 15674683
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  15674613 ttaataaataaagattcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacagg 15674683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 26206114 - 26206184
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  26206114 ttaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacagg 26206184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 1104302 - 1104237
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||||||    
T  1104302 tcaataaagattcaatataagagattgtacctaatggagctttgaagaaggaaagagcatagacag 1104237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 649432 - 649362
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  649432 ttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacagg 649362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 21629469 - 21629411
Alignment:
Q  263 gattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  21629469 gattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 21629411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 17577067 - 17577006
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||    
T  17577067 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgaatagacagg 17577006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 17605684 - 17605623
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  17605684 aaagattcaatagaagagattatacctgatggagctttgaaaaaggaaagcgcatagacagg 17605623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 2554395 - 2554457
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| |||| || ||||||||||| |||||||||||||||||||||    
T  2554395 aaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagtgcatagacaggt 2554457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 11060221 - 11060151
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| ||||| ||||||||| ||||||| ||| |||||||||||||||| |||||||||||    
T  11060221 ttaataaataaagaatcaatggaagagattatacctgatggaactttgaagaaggaaagcgcatagacagg 11060151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 24766764 - 24766702
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||| ||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  24766764 aaagatttaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 24766702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 21549632 - 21549696
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||||| ||||||||| ||||||  |||||||||||||| ||||| |||||||||    
T  21549632 tcaataaagattcaatggaagagattatacctgttggagctttgaagaaagaaagagcatagaca 21549696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 28575819 - 28575763
Alignment:
Q  252 taatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaa 308  Q
    ||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||||    
T  28575819 taatcaataaagattcaatagaagatattatacctgatgaagctttgaagaaggaaa 28575763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 17078420 - 17078357
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||| ||||    
T  17078420 aataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacag 17078357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 13938508 - 13938565
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  13938508 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcataga 13938565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 502885 - 502821
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||  | ||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  502885 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 502821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 12913602 - 12913654
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  12913602 aataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaag 12913654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 14843473 - 14843426
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  14843473 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 14843426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 25351027 - 25351074
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  25351027 agagattatacctgacggagctttgaagaaggaaagagcatagacagg 25351074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 11469358 - 11469412
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||| ||||||||||| |||||||||  |||||| ||||||||||||||||||||    
T  11469358 tcaacaaagattcaatggaagagattaaacctgatggagctttgaagaaggaaag 11469412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 13086333 - 13086394
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||  |||||||| ||||||| |||||||| ||||||||||| ||||| |||||    
T  13086333 aaagattcaatgaaagagattatacctgatggagctttaaagaaggaaagagcataaacagg 13086394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 13563276 - 13563219
Alignment:
Q  264 attcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||| ||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  13563276 attcaatggaaaagattatacctgacggagctttgaaaaaggaaagagcatagacagg 13563219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 19350734 - 19350795
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||   ||| ||| ||||||| ||||||||||||||||||||| ||||||||||    
T  19350734 aaagattcaatgagagaaattatacctgacggagctttgaagaaggaaagtacatagacagg 19350795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 20497678 - 20497735
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||||||||||||||  ||| ||||| ||||||| |||||||||| |||||||||    
T  20497678 agattcaatagaagagatgatacatgaggaagctttgcagaaggaaagagcatagaca 20497735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 2923699 - 2923747
Alignment:
Q  328 actttaggagaactagacaaccaccaaaagaaagaaatctactcttcca 376  Q
    ||||||||||||| || | ||||||||||||||||||| ||||||||||    
T  2923699 actttaggagaaccaggcgaccaccaaaagaaagaaatttactcttcca 2923747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 14686344 - 14686296
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  14686344 agagattatacctgacggagccttgaagaaggaaagagcatagacaggt 14686296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 15987862 - 15987802
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcata 315  Q
    |||||||||||||||||||||||||  ||||| | | || ||||||||||||||| |||||    
T  15987862 tcaataaagattcaatagaagagataatacctaatgaaggtttgaagaaggaaagagcata 15987802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 34444883 - 34444828
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||||| |||| || ||||||| || ||||| ||||||    
T  34444883 gggagaatcgaacctgagaccttggggaggagcacactctaaggtcccaagtcaat 34444828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Original strand, 24641151 - 24641241
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaaca-tggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||||||| || ||||||||   || || |||||||||||||| | |||| |||||| || |||||| ||||||||| ||||||    
T  24641151 gaagaagttaaattagcccacctaaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaat 24641241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 15956326 - 15956265
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||| |  |||||||||| ||||||||| |||| |||||    
T  15956326 aaagattcaatggaagagattatacctaactgagctttgaaaaaggaaagtacataaacagg 15956265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 18681924 - 18681863
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| | ||||||| |||| || ||||||||||| |||||||| || ||||||||    
T  18681924 aaagattcaatgggagagattatacccgatggagctttgaaaaaggaaagagcgtagacagg 18681863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 10338168 - 10338208
Alignment:
Q  52 tggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||| ||||||||||||||||||||||||| || ||||||    
T  10338168 tggggggaatcgaacctgagaccttgaggaggagcacactc 10338208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 4e-20; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 197 - 319
Target Start/End: Complemental strand, 15481171 - 15481049
Alignment:
Q  197 ttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctt 296  Q
    |||||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||| |||||||    
T  15481171 ttccaacctatccaagtaatttttctacaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctt 15481072  T
Q  297 tgaagaaggaaagtgcatagaca 319  Q
    ||||||| ||||| |||||||||    
T  15481071 tgaagaaagaaagagcatagaca 15481049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 24926038 - 24925974
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  24926038 aataaagattcaatggaagagattatacctgatggagctttgaagaaagaaagtgcatagacagg 24925974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 2365068 - 2365130
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  2365068 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 2365130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 19919579 - 19919517
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  19919579 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 19919517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 48569373 - 48569312
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  48569373 aaagattcaatggaagagattatacctgatggagctttgaaaaaggaaagtgcatagacagg 48569312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 52907390 - 52907330
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||    
T  52907390 agattcaatagaagagattatacctgatggagctttgaagaaggaaagggcataaacaggt 52907330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 47538048 - 47538119
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| |||||||| ||||||||||||||| || |||| |||| ||||||||||||||| ||||||||||||    
T  47538048 ttaataaataaagaatcaatagaagagattatatctgatggagttttgaagaaggaaagcgcatagacaggt 47538119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 6175836 - 6175766
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || |||||||||||||| |||||| ||||||  |||| |||||||||||||||||||||||||||    
T  6175836 ttaattaacaaagattcaatagaggagattatacctgttggagttttgaagaaggaaagtgcatagacagg 6175766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 34332165 - 34332103
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| |||||||| || |||||||||||||||||||||    
T  34332165 aaagattcaatggaagagattatacctgacggagctttaaaaaaggaaagtgcatagacaggt 34332103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 962513 - 962452
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  962513 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 962452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 16179730 - 16179791
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||||    
T  16179730 aaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagacagg 16179791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Complemental strand, 17077652 - 17077588
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||| ||||||||||| ||||||||| |||||||  |||||||||| ||||||||||||||||||    
T  17077652 tcaacaaagattcaatggaagagattatacctgacagagctttgaaaaaggaaagtgcatagaca 17077588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 36709637 - 36709760
Alignment:
Q  197 ttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctt 296  Q
    |||||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||  |||||||    
T  36709637 ttccaacctatccaagtaatttttctacaatcctcactcccaccc-caaaaaaattattcaataaagattcaatggaagagattatacctgttggagctt 36709735  T
Q  297 tgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||| |||| ||||||    
T  36709736 tgaagaaagaaagagcatcgacagg 36709760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 317
Target Start/End: Complemental strand, 46908023 - 46907963
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||||||||||| |||||||    
T  46908023 aataaagattcaatggaagagattatacttgatggagctttgaagaaggaaagagcataga 46907963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 14863811 - 14863745
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||| | |||||||| ||||||||||| |||||||||||    
T  14863811 tcaacaaagattcaatggaagagattatacctaatggagctttaaagaaggaaagagcatagacagg 14863745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 21739843 - 21739777
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| || |||| |||||||| ||||||||||| |||||||||||    
T  21739843 tcaacaaagattcaatggaagagattataactgatggagctttaaagaaggaaagagcatagacagg 21739777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 23819346 - 23819416
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||||||||||| ||||||||| ||| ||| |||||||||||||||||||| ||||| |||||    
T  23819346 ttaataaacaaagattcaatggaagagattatacttgatggagctttgaagaaggaaagcgcatatacagg 23819416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 42674793 - 42674727
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||||| |||||||||  |||||  |||||||||||||| ||||| |||||||||||    
T  42674793 tcaataaagattcaatggaagagattacacctgttggagctttgaagaaagaaagagcatagacagg 42674727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 12341605 - 12341544
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| |||| || |||||||| || |||||||||| |||||||||    
T  12341605 aaagattcaatagaagagattatacccgacggagctttaaaaaaggaaagtgtatagacagg 12341544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 30166676 - 30166611
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  30166676 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 30166611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 317
Target Start/End: Original strand, 36731683 - 36731740
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||    
T  36731683 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcataga 36731740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 318
Target Start/End: Original strand, 50545030 - 50545091
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagac 318  Q
    |||||||||||||| ||||||||| ||||||| ||| |||||||||||||||  ||||||||    
T  50545030 aataaagattcaatggaagagattatacctgatggacctttgaagaaggaaaacgcatagac 50545091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 43121024 - 43120964
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||||||||| ||||||||| ||||| | |||||||||||||||||||  ||||||||||    
T  43121024 aaagattcaatggaagagattatacctaatggagctttgaagaaggaaaacgcatagacag 43120964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 321
Target Start/End: Original strand, 31675735 - 31675782
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  31675735 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 31675782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 30311384 - 30311338
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||    
T  30311384 gagaatcgaacctgagaccttgaggaggagcacactcccagatccca 30311338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 18381831 - 18381900
Alignment:
Q  253 aatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||| | ||||||||| ||||| ||| ||||||| ||||||||||| |||||||  ||||||||||||    
T  18381831 aatcaaaatagattcaatggaagatattatacctgatggagctttgaaaaaggaaatagcatagacaggt 18381900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 19876033 - 19876094
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||   ||| ||| ||||||| |||| |||||||||||||||||||||||||||    
T  19876033 aaagattcaatgagagaaattatacctgacggagatttgaagaaggaaagtgcatagacagg 19876094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 19891467 - 19891528
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||| |||| |||||    
T  19891467 aaagattcaatggaagatattatacctgacggagctttgaaaaaggaaagttcataaacagg 19891528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 53942050 - 53942095
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||    
T  53942050 agagattatacctgacggagctttgaagaaggaaagagcatagaca 53942095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 40513060 - 40513012
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  40513060 agagattatacctgacggagccttgaagaaggaaagagcatagacaggt 40513012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 8948347 - 8948308
Alignment:
Q  282 tacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  8948347 tacctgagggagctttgaagaaggaaatagcatagacagg 8948308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 17035065 - 17035013
Alignment:
Q  55 ggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||||||||  ||  ||||||||||||||| ||||||    
T  17035065 ggagaatcgaacctgagaccttgaggatgag--cactctcagatcccaagtcaat 17035013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 20797919 - 20797958
Alignment:
Q  282 tacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  20797919 tacctgagggagctttgaagaaggaaaaagcatagacagg 20797958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 321
Target Start/End: Original strand, 10868437 - 10868495
Alignment:
Q  263 gattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||| ||||||||| |||||||  ||||||| ||||||||||| ||||| |||||    
T  10868437 gattcaatggaagagattatacctgatagagctttaaagaaggaaagagcatatacagg 10868495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 308
Target Start/End: Original strand, 20367340 - 20367386
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaa 308  Q
    ||||||| |||| |||||  |||||||||||||||||||||||||||    
T  20367340 agattcattagaggagatgatacctgagggagctttgaagaaggaaa 20367386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 20501774 - 20501728
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||| ||||| || |||||||||| |||||    
T  20501774 gagaatcgaacctgagaccttaaggaggagcacactctcaggtccca 20501728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 28703402 - 28703448
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||| ||| || |||||| |||||||||    
T  28703402 gagaatcgaacctgagaccttgaagaggagcacactcccagatccca 28703448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 39253775 - 39253729
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||| ||| || |||||| |||||||||    
T  39253775 gagaatcgaacctgagaccttgaagaggagcacactcccagatccca 39253729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 47824193 - 47824147
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||    
T  47824193 gagaatcgaactagagactttgaggaggagtacactctcagatccca 47824147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 52250463 - 52250413
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  52250463 gaagaaattatacctgacggagccttgaagaaggaaagcgcatagacaggt 52250413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 353155 - 353184
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaag 85  Q
    ||||||||||||||||||||||||||||||    
T  353155 gagaatcgaacctgagaccttgaggagaag 353184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 47454578 - 47454651
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacat-ggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||| |||| ||||| ||||||||   ||| ||||||||||||||||||||||| |||||| || ||||||    
T  47454578 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactc 47454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 5499402 - 5499458
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||| |||||| ||||||| ||||| || ||||||||||||| || ||||||    
T  5499402 ggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaat 5499458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 318
Target Start/End: Original strand, 8130765 - 8130821
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagac 318  Q
    |||||| || ||||||||| ||||||  ||||| |||||||||||||| ||||||||    
T  8130765 agattctatggaagagattctacctgctggagccttgaagaaggaaagagcatagac 8130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 14186725 - 14186689
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  14186725 gagaatcgaacctgagaccttgaggaggagcacactc 14186689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 14339690 - 14339642
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||||| |||||||| || |||||| || ||||||    
T  14339690 gggagaatcgaacctgagacattgaggaggagcacactcccaaatccca 14339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 19154709 - 19154669
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    ||||||||||||||||||||| ||||| || ||||||||||    
T  19154709 gagaatcgaacctgagacctttaggaggagcacactctcag 19154669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 34830184 - 34830244
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||| | ||||||| ||||||| |||||   |||||||||||| ||||||||||||    
T  34830184 agattcaatggcagagattatacctgacggagccaggaagaaggaaagagcatagacaggt 34830244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 37788463 - 37788499
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  37788463 gagaatcgaacctgagaccttgaggaggagcacactc 37788499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 13551363 - 13551433
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || |||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  13551363 ttaataaacaaagattcaatagaggagattatacctgatggagctttgaagaaggaaagtgcatagacagg 13551433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 25380749 - 25380687
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  25380749 tcaataaagattcaatagaagagattatacctgatggagctttgaagaaagaaagtgcataga 25380687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 15018464 - 15018528
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15018464 aataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacagg 15018528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 320
Target Start/End: Complemental strand, 8065674 - 8065551
Alignment:
Q  197 ttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctt 296  Q
    |||||||| ||||||  | ||||||||| ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||| |||||||    
T  8065674 ttccaacctatccaataaatttttctaaaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgatggagctt 8065575  T
Q  297 tgaagaaggaaagtgcatagacag 320  Q
    ||||||||||||  ||||||||||    
T  8065574 tgaagaaggaaaaagcatagacag 8065551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 321
Target Start/End: Complemental strand, 28399961 - 28399839
Alignment:
Q  199 ccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctttg 298  Q
    |||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||  |||||||||    
T  28399961 ccaacctatccaagtaatttttctacaatcctcactcccaccccaaaaaaaattattcaataaagattcaatggaagagattatacctgctggagctttg 28399862  T
Q  299 aagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| |||||||||||    
T  28399861 aagaaagaaagagcatagacagg 28399839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 33515543 - 33515482
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  33515543 aaagatttaatggaagagattgtacctgacggagctttgaaaaaggaaagtgcatagacagg 33515482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 35488623 - 35488689
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||||| ||||||||| ||||||| |||||||| ||||||||||  |||||||||||    
T  35488623 tcaataaagattcaatggaagagattatacctgaaggagctttaaagaaggaaaaagcatagacagg 35488689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 14440534 - 14440595
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| |||||    
T  14440534 aaagattcaatagaagagattatacctgacggagctttaaaaaaggaaagtgcataaacagg 14440595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Complemental strand, 44028572 - 44028503
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||| | ||||||||||||||||||| ||| ||| ||||| |||||||||||||| ||||||||||    
T  44028572 ttaatcaaaagagattcaatagaagagattatacatgatggagccttgaagaaggaaagagcatagacag 44028503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 12646340 - 12646401
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||  ||||||||||| |||||||| |||||||||||    
T  12646340 aaagattcaatggaagagattatacctggcggagctttgaaaaaggaaagagcatagacagg 12646401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 37480156 - 37480107
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||||||||||||||| || |||||||||| |||||    
T  37480156 ggggagaatcgaacctgagaccttgaggaggagcacactctcaggtccca 37480107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 45422307 - 45422372
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  45422307 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 45422372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 2207166 - 2207110
Alignment:
Q  266 tcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||||||||||||||||  ||||| |||||||||||||| ||||||||||||    
T  2207166 tcaatggaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggt 2207110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 10289414 - 10289355
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||| | |||  ||| |||||||||||||||||||||||| |||||||||||    
T  10289414 agattcaatagaggcgatgatacttgagggagctttgaagaaggaaagagcatagacagg 10289355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 6724970 - 6724920
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||||||  ||||| |||||||||||||| ||||||||||||    
T  6724970 gaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggt 6724920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 11233844 - 11233778
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||| | ||||||| |||||||| ||||||||||| ||||| |||||    
T  11233844 tcaacaaagattcaatggaagagactatacctgatggagctttaaagaaggaaagagcataaacagg 11233778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 23052519 - 23052557
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  23052519 gggagaatcgaacctgagaccttgaggagaagcacactc 23052557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 320
Target Start/End: Complemental strand, 9668361 - 9668296
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||| ||||||||||| ||||||||| || |||| |||||||| |||||||| || ||||||||||    
T  9668361 tcaacaaagattcaatggaagagattatatctgatggagctttaaagaaggacagagcatagacag 9668296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 13416478 - 13416535
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||| || ||||||||||||||||  ||||| |||||||||||||| |||||||||    
T  13416478 agattctatggaagagattgtacctgctggagccttgaagaaggaaagagcatagaca 13416535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 19244187 - 19244134
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||| |||| || |||||||||| ||||| ||||||    
T  19244187 gagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaat 19244134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 28253521 - 28253578
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||||| ||||||||| ||||||| | | ||||||| ||||||||||||||||||    
T  28253521 agattcaatggaagagattatacctgacgaaactttgaaaaaggaaagtgcatagaca 28253578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 33583766 - 33583717
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  33583766 gaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 33583717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 38854463 - 38854500
Alignment:
Q  59 aatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  38854463 aatcgaacctgagaccttgaggagaggtacactctcag 38854500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 39715074 - 39715017
Alignment:
Q  52 tggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||||| |||||| || |||||| ||| ||||| ||||||    
T  39715074 tggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaat 39715017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 4060212 - 4060252
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  4060212 gagaatcgaacctgagatcttgaggagaagcacactctcag 4060252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 29503351 - 29503303
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||||| || |||||| ||| |||||    
T  29503351 gggagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 29503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 3153167 - 3153108
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||||| |||||| |||||||||||| || ||||| || ||||||||    
T  3153167 agattcaatggaagagattatacctgcgggagctttgaaaaaagaaagggcgtagacagg 3153108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 321
Target Start/End: Original strand, 6824231 - 6824262
Alignment:
Q  290 ggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||||||||||||||    
T  6824231 ggagctttgaagaaggaaagtgcatagacagg 6824262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 257 - 304
Target Start/End: Original strand, 28598732 - 28598779
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaag 304  Q
    |||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  28598732 aataaaaattcaatagaagagattatacctgaagaagctttgaagaag 28598779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 31681130 - 31681091
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  31681130 ggggagaatcgaacctgagactttgaggagaagcacactc 31681091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 34041588 - 34041639
Alignment:
Q  58 gaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||| ||||||||||||||||||| || |||||||||||||| | ||||||    
T  34041588 gaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaat 34041639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 4262273 - 4262335
Alignment:
Q  29 aaattaaccaacctaaatcaacatggggagaatcgaacctgagaccttgaggagaagtacact 91  Q
    ||||||||| ||||||||  ||  || ||||||||||||||||||||||||||| || |||||    
T  4262273 aaattaacctacctaaattgacccggagagaatcgaacctgagaccttgaggaggagcacact 4262335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 26147017 - 26147067
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  26147017 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 26147067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 42327393 - 42327439
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||||    
T  42327393 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 42327439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 43311061 - 43311111
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  43311061 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 43311111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 4438978 - 4439023
Alignment:
Q  57 agaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||| || |||||||||||| || ||||||||||||||||    
T  4438978 agaatcgaacatgcgaccttgaggaggagcacactctcagatccca 4439023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 38856163 - 38856200
Alignment:
Q  59 aatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    |||||||| |||||||||||||||| ||||||||||||    
T  38856163 aatcgaacatgagaccttgaggagaggtacactctcag 38856200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 11062438 - 11062402
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||| |||||||||||||||||||||| ||||||    
T  11062438 gagaatcaaacctgagaccttgaggagaagcacactc 11062402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 322
Target Start/End: Original strand, 20004745 - 20004797
Alignment:
Q  270 tagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| |||||||  |||||||||||||||| || | ||||||||||    
T  20004745 tagaagagattatacctgatagagctttgaagaaggagagagtatagacaggt 20004797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 8299532 - 8299471
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  8299532 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 8299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 319
Target Start/End: Original strand, 10780991 - 10781050
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  10780991 aaagattcaatagaagagattatacctgacggagctttgaaaaaggaaagtgcatagaca 10781050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 320
Target Start/End: Complemental strand, 26261742 - 26261608
Alignment:
Q  185 aaacaaatatttttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtac 284  Q
    ||||||| | |||||||||||||||||| | |||| ||| |||||||||| ||||||         ||| |||| | | ||||||||||||||||| |||    
T  26261742 aaacaaacagttttccaaccaatccaagaaattttcctatgatcctcactcccaccc-caaaaaaattattcaaaataaattcaatagaagagattatac 26261644  T
Q  285 ctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||| |||||||||||||||||||| ||||||||||    
T  26261643 ctgaaggagctttgaagaaggaaagagcatagacag 26261608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 23239173 - 23239235
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  23239173 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 23239235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 28535026 - 28534964
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  28535026 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 28534964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 30731664 - 30731602
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  30731664 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 30731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 38358196 - 38358318
Alignment:
Q  199 ccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctttg 298  Q
    |||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||  |||||||||    
T  38358196 ccaacctatccaagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttg 38358295  T
Q  299 aagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| |||||||||||    
T  38358296 aagaaagaaagagcatagacagg 38358318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 42514510 - 42514572
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  42514510 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 42514572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 27796274 - 27796335
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  27796274 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 27796335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 22094602 - 22094538
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  22094602 aataaagattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacagg 22094538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 35122043 - 35121977
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  35122043 tcaacaaagattcaatggaagagattatacctgaaggagctttaaagaaggaaagagcatagacagg 35121977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 25856789 - 25856728
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  25856789 aaagatttaatataagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 25856728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 19506783 - 19506847
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||    
T  19506783 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagaca 19506847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 6050021 - 6050091
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| | ||| ||||| ||| ||||||| |||||||||||||||||||| |||||||||||    
T  6050021 ttaataaataaagaattaatggaagatattatacctgatggagctttgaagaaggaaagcgcatagacagg 6050091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 33170448 - 33170510
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||| ||||| ||||||| ||||||||||| |||||||| ||||||||||||    
T  33170448 aaagattcaatggaatagattatacctgacggagctttgaaaaaggaaagagcatagacaggt 33170510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 35983141 - 35983079
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||| ||||| |||||||  |||||||||| |||||||||||||||||||||    
T  35983141 aaagattcaatggaaaagattatacctgacagagctttgaaaaaggaaagtgcatagacaggt 35983079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 316
Target Start/End: Original strand, 6885699 - 6885759
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatag 316  Q
    ||||||||||| || ||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  6885699 tcaataaagatgca-tagaagagattatacctgatggagctttgaagaaggaaagagcatag 6885759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 22438010 - 22438067
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||  |||||||||    
T  22438010 agattcaatataagagattatacctgagggagctatgaagaaggaaaaagcatagaca 22438067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29572220 - 29572159
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29572220 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29572159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29573597 - 29573536
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29573597 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29573536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29574974 - 29574913
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29574974 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29574913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29576351 - 29576290
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29576351 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29577728 - 29577667
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29577728 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29577667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 29579105 - 29579044
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||  ||||||||| ||| |||  |||||||||||||||||||||||||||||||    
T  29579105 aaagattcaaaggaagagattatacttgacagagctttgaagaaggaaagtgcatagacagg 29579044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 19838349 - 19838416
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagc-tttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||||| |||||||||||||||||   |||| |||||||||||||||  ||||||||||    
T  19838349 tcaataaagattcaacagaagagattgtacctgtcagagcttttgaagaaggaaagaacatagacagg 19838416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 317
Target Start/End: Original strand, 34481729 - 34481795
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    ||||| || |||||||||||||| |||||| ||||||| | ||||||||||||||| ||||| ||||    
T  34481729 ttaataaacaaagattcaatagaggagattatacctgatgaagctttgaagaaggagagtgcgtaga 34481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 84905 - 84856
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||| ||||||||||||||| || |||||| |||||||||    
T  84905 ggggagaatcgaacttgagaccttgaggaggagcacactcccagatccca 84856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 20208058 - 20208009
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||| ||| |||||||||||||||||||| |||||||||||    
T  20208058 gaagagattatacatgatggagctttgaagaaggaaagcgcatagacagg 20208009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 30509373 - 30509312
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| ||||||||| ||||||  |||||||| ||||||||||| |||||||||||    
T  30509373 aaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacagg 30509312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 30549716 - 30549655
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| ||||||||| ||||||  |||||||| ||||||||||| |||||||||||    
T  30549716 aaagaatcaatggaagagattatacctgttggagctttaaagaaggaaagagcatagacagg 30549655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 42260069 - 42260133
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| |||||| ||| ||||| || |||| |||||||||||||||||||| || ||||||||    
T  42260069 aataaagtttcaatggaaaagattatatctgatggagctttgaagaaggaaagagcgtagacagg 42260133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 43442274 - 43442231
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatc 99  Q
    ||||||||||||||||||||||||||| || |||||| ||||||    
T  43442274 gagaatcgaacctgagaccttgaggaggagcacactcccagatc 43442231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 588292 - 588358
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||| ||||||||| ||||||||| ||| | | ||||||||||||||  |||| |||||||||||    
T  588292 tcaatagagattcaatggaagagattatacataatggagctttgaagaaacaaagagcatagacagg 588358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 21084683 - 21084733
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  21084683 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 21084733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 36256577 - 36256627
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||| |||||  ||||| |||||||||||||| ||||||||||||    
T  36256577 gaagagattgcacctgttggagccttgaagaaggaaagagcatagacaggt 36256627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 40036003 - 40035957
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaa 308  Q
    |||||||||||| |||||| ||| ||||||||| |||||||||||||    
T  40036003 agattcaatagaggagattatacatgagggagcattgaagaaggaaa 40035957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 40461576 - 40461650
Alignment:
Q  21 aagaagttaaattaaccaacctaaatcaacatggggagaatcgaacctgagaccttgaggagaagtacactctca 95  Q
    |||||||||||||| || || |||||   |||  |||| ||| |||||||||||||||||||||| |||||||||    
T  40461576 aagaagttaaattagcccacttaaatttgcatcaggaggatctaacctgagaccttgaggagaagcacactctca 40461650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 16773885 - 16773832
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||| |||||| || |||||| ||| ||||| ||||||    
T  16773885 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaat 16773832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 33385299 - 33385262
Alignment:
Q  284 cctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  33385299 cctgacggagctttgaaaaaggaaagtgcatagacagg 33385262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 478950 - 479002
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||  | ||| ||| |||||||||| |||||||||||||||||    
T  478950 aataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 479002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 82
Target Start/End: Complemental strand, 3315295 - 3315267
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggag 82  Q
    |||||||||||||||||||||||||||||    
T  3315295 gggagaatcgaacctgagaccttgaggag 3315267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 14285239 - 14285203
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  14285239 gagaatcgaacctgagaccttgaggaggagcacactc 14285203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 15829935 - 15829883
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||  | ||| ||| |||||||||| |||||||||||||||||    
T  15829935 aataaagattcaagggtagaaattatacctgagggggctttgaagaaggaaag 15829883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 15862038 - 15861974
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| ||||||||  ||||||| | | |||||||||| ||||| ||| |||||||    
T  15862038 aataaagattcaatggaagagataatacctgacgaatctttgaagaaagaaagagcacagacagg 15861974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 25627135 - 25627099
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  25627135 gagaatcgaacctgagaccttgaggaggagcacactc 25627099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 25979248 - 25979212
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  25979248 gagaatcgaacctgagaccttgaggaggagaacactc 25979212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 35360084 - 35360120
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  35360084 gagaatcgaacctgagacctcgaggagaagcacactc 35360120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 29553154 - 29553090
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  29553154 aataaagattcaatggaagagattatacctgacggagctttgaagaaggaaagagcatagacagg 29553090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 19115223 - 19115286
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19115223 aataaagattcaatggtagagattatacctgacggagctttgaagaaggaaagtgcatagacag 19115286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 23641941 - 23641879
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  23641941 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 23641879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 23647599 - 23647537
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  23647599 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 23647537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 26694657 - 26694779
Alignment:
Q  199 ccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctttg 298  Q
    |||||| ||||||||| ||||||||  ||||||||| ||||||         ||| |||||||||||||||| ||||||||| ||||||  |||||||||    
T  26694657 ccaacctatccaagtaatttttctacaatcctcactcccaccccagaaaaaattattcaataaagattcaatggaagagattatacctgttggagctttg 26694756  T
Q  299 aagaaggaaagtgcatagacagg 321  Q
    ||||| ||||| |||||||||||    
T  26694757 aagaaagaaagggcatagacagg 26694779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 34976722 - 34976792
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||||||||| ||||||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  34976722 ttaataaataaagattcaatggaagagattatacctgatggagctttgaagaaggaaagcgcataaacagg 34976792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 1827890 - 1827829
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  1827890 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 1827829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 42779031 - 42779100
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||| |||||||| ||||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  42779031 ttaataaataaagaatcaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 42779100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 48312884 - 48312945
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  48312884 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 48312945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 54482510 - 54482449
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  54482510 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacagg 54482449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 19733341 - 19733277
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||| |||||||| |||||||||||    
T  19733341 aataaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagagcatagacagg 19733277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 20675816 - 20675886
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || |||||||||||||| |||||| ||||||  |||||||||||||| |||||||||||||||||    
T  20675816 ttaattaacaaagattcaatagaggagattatacctgctggagctttgaagaatgaaagtgcatagacagg 20675886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 23872836 - 23872766
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  23872836 ttaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacagg 23872766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 42952886 - 42952820
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  42952886 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 42952820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 55299402 - 55299472
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  55299402 ttaataaacaaagaatcaatagaggagattatacctgttggagctttgaagaaggaaagtgcatagacagg 55299472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 20396363 - 20396432
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||| |||||||| | ||| ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  20396363 ttaataaataaagaattaatggaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 20396432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 47419594 - 47419655
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||||||  ||||||||||||||||| ||||||||||||||    
T  47419594 aaagattcaatggaagagattatacctgtcggagctttgaagaaggagagtgcatagacagg 47419655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 8935861 - 8935924
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||| ||||||| | ||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  8935861 aataaaaattcaatggcagagattatacctgacggagctttgaagaaggaaagagcatagacag 8935924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 19756057 - 19756119
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| |||||||  ||| |||||| |||||||||||||||||||||    
T  19756057 aaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggt 19756119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 19783749 - 19783687
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| |||||||  ||| |||||| |||||||||||||||||||||    
T  19783749 aaagattcaatggaagagattatacctgacagagttttgaaaaaggaaagtgcatagacaggt 19783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 7662661 - 7662596
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  7662661 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 7662596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 15741010 - 15741063
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgca 313  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||||    
T  15741010 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgca 15741063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 320
Target Start/End: Complemental strand, 10562662 - 10562614
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    ||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  10562662 gaagagattatacctgatggagctttgaagaaggaaagcgcatagacag 10562614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 37872000 - 37872052
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  37872000 aataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaag 37872052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 39509177 - 39509102
Alignment:
Q  28 taaattaaccaacctaaatcaaca-tggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||| ||||||||   || |||||||||||||||||||||||| |||||| || |||||| |||||||||    
T  39509177 taaattaacccacctaaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatccca 39509102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 47044797 - 47044742
Alignment:
Q  54 gggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||||| |||||| || | |||||||||||||| ||||||    
T  47044797 gggagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaat 47044742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 322
Target Start/End: Complemental strand, 19162507 - 19162457
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||||||  ||||| |||||||||||||| ||||||||||||    
T  19162507 gaagagattgtacctgctggagccttgaagaaggaaagagcatagacaggt 19162457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 53486288 - 53486218
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| ||||| ||||||||| ||| ||| |||||||||||||||||||   ||||||||||    
T  53486288 ttaataaataaagaatcaatggaagagattatacttgatggagctttgaagaaggaaaacacatagacagg 53486218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 19648482 - 19648547
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  | ||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  19648482 aataaagattcaagggtagaaattatacctgacggagctttgaagaaagaaagagcatagacaggt 19648547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 55725057 - 55724996
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| |||| || ||||||||||| ||||||||  ||||||||||    
T  55725057 aaagattcaatggaagagattatacccgacggagctttgaaaaaggaaagaacatagacagg 55724996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 38296497 - 38296557
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||| ||| | ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  38296497 agattcaatggaaaaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 38296557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 38869844 - 38869800
Alignment:
Q  58 gaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||| || |||||| |||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatccca 38869800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 43497979 - 43497923
Alignment:
Q  323 gacatactttaggagaactagacaaccaccaaaagaaagaaatctactcttccaacc 379  Q
    |||| ||||||||||||||| || |||||| |||||||||  |||||||||||||||    
T  43497979 gacagactttaggagaactaaacgaccacccaaagaaagatttctactcttccaacc 43497923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 43516084 - 43516036
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  43516084 agagattatacctgatggagccttgaagaaggaaagagcatagacaggt 43516036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 30938180 - 30938263
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaacat-ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||| |||| ||||| ||||||||   ||| ||||||||||||||||||||||| |||||| || ||||||  ||||||||    
T  30938180 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatccca 30938263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 309
Target Start/End: Complemental strand, 40434067 - 40434020
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||| |||||  ||||||||||||| ||||||||||||||    
T  40434067 agattcaatagaggagatgatacctgagggagccttgaagaaggaaag 40434020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 46295178 - 46295139
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  46295178 ggggagaatcgaacctgagaccttgaggaggagcacactc 46295139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 23378034 - 23377988
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||||    
T  23378034 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 23377988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 37109349 - 37109395
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| ||| |||||    
T  37109349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtccca 37109395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 40688882 - 40688931
Alignment:
Q  272 gaagagattgtacctgagggagc-tttgaagaaggaaagtgcatagacag 320  Q
    ||||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  40688882 gaagagattgtacctgctggagcctttgaagaaggaaagagcatagacag 40688931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 7949452 - 7949488
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  7949452 gagaatcgaacctgagaccttgaggaggagcacactc 7949488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 18871017 - 18871069
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    ||||||||||||||||| || ||| ||| || |||||| ||||||||||||||    
T  18871017 aataaagattcaatagaggaaattatacttgtgggagccttgaagaaggaaag 18871069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 49576892 - 49576928
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  49576892 gagaatcgaacctgagaccttgaggaggagcacactc 49576928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 4042 - 4104
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  4042 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 4104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 105193 - 105131
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  105193 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 105131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 6051393 - 6051455
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  6051393 aaagattcaatggaagagattatacctgtcggagctttgaagaaggaaagtgcatagacaggt 6051455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 35541824 - 35541886
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||    
T  35541824 aaagattcaatggaagagattatacctgacggagctttgaaaaaggaaagtgcatagacaggt 35541886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 251 - 321
Target Start/End: Original strand, 5497867 - 5497937
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||| |||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||    
T  5497867 ttaataaacaaatattcaatagaggagattatacctgatggagctttgaagaaggaaattgcatagacagg 5497937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 20796445 - 20796511
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||||||||| |||||||||||    
T  20796445 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaggaaagagcatagacagg 20796511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 17708860 - 17708909
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  17708860 gaagagattatacctgatggagctttgaagaaggaaagtgcatagacagg 17708909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 321
Target Start/End: Complemental strand, 32352662 - 32352601
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| |||||| ||||||  ||||||||||||||||||||||||||||||||    
T  32352662 aaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagtgcatagacagg 32352601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 7396073 - 7396010
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||||||||  ||||||||| ||||||| ||||||||||||||||||||  |||||||||    
T  7396073 aataaagattcaacggaagagattatacctgatggagctttgaagaaggaaagatcatagacag 7396010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 33260050 - 33259991
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||  ||||  |||||||||||||||||||||||||||| |||||||||||    
T  33260050 agattcaatagagaagatgatacctgagggagctttgaagaaggaaagagcatagacagg 33259991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 33280209 - 33280150
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||||  ||||  |||||||||||||||||||||||||||| |||||||||||    
T  33280209 agattcaatagagaagatgatacctgagggagctttgaagaaggaaagagcatagacagg 33280150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 47622425 - 47622366
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||||| || |||| ||||||||||| ||||||||||||||||||||    
T  47622425 agattcaatggaagagattatatctgacggagctttgaaaaaggaaagtgcatagacagg 47622366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Original strand, 39431071 - 39431137
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| || |||||||| |||||||||||    
T  39431071 tcaacaaagattcaatggaagagattatacctgatggagctttaaataaggaaagagcatagacagg 39431137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 48072785 - 48072715
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| || ||||| |||||||| |||||| ||||||  |||||||||||||||||||| |||||||||||    
T  48072785 ttaataaacaaagaatcaatagaggagattatacctgctggagctttgaagaaggaaagcgcatagacagg 48072715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 49264320 - 49264254
Alignment:
Q  255 tcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||| ||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| |||||||||||    
T  49264320 tcaacaaagattcaatggaagagattatacctgatggagctttaaagaaagaaagagcatagacagg 49264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 26721435 - 26721484
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  26721435 gaagagattatacctgatggagctttgaagaaggaaagcgcatagacagg 26721484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 51814572 - 51814519
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||||||||||||||||||| || ||||||||||||| || ||||||    
T  51814572 gagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaat 51814519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 25504345 - 25504281
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||||||  | ||||||| ||||||| |||||||||||||| ||||| |||||||||||    
T  25504345 aataaagattcaagggtagagattatacctgacggagctttgaagaaagaaagagcatagacagg 25504281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 34548114 - 34548062
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    |||||||||||||||||||| ||  |||||| |||||||||||||||||||||    
T  34548114 aataaagattcaatagaagaaatgatacctgcgggagctttgaagaaggaaag 34548062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 43943830 - 43943766
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||||| ||||||||||||| ||| || ||||||| ||||||||||||| ||||| |||||    
T  43943830 aataaagattaaatagaagagattatacatgcgggagctctgaagaaggaaagggcatatacagg 43943766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 3544437 - 3544390
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  3544437 agagattatacctgacggagctttgaagaaggaaagggcatagacagg 3544390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 320
Target Start/End: Complemental strand, 10710556 - 10710494
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacag 320  Q
    |||||||| ||||| ||||||||| ||||||| |||||||||||||||| ||| ||||||||||    
T  10710556 aataaagaatcaatggaagagattatacctgatggagctttgaagaagg-aagcgcatagacag 10710494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 48434942 - 48435001
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||||| |||||| |||||||||||| |||||||| || ||||||||    
T  48434942 agattcaatggaagagattatacctgcgggagctttgaaaaaggaaagagcgtagacagg 48435001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 319
Target Start/End: Original strand, 3074531 - 3074593
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    |||||||||||||  | ||||||| ||||||| |||||| ||||||||||||| |||||||||    
T  3074531 aataaagattcaagggtagagattatacctgatggagctctgaagaaggaaagggcatagaca 3074593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 322
Target Start/End: Original strand, 5809387 - 5809433
Alignment:
Q  276 agattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  5809387 agattatacctgacggagctttgaagaaggaaagagcatagacaggt 5809433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 15786318 - 15786364
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||    
T  15786318 gagaatcgaacctgagaccttgaggaggagcacactcccagatccca 15786364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 19042913 - 19042975
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||| |||||||| ||||||| ||||||  |||||||||||| ||||| ||||||    
T  19042913 aaagattcaataaaagagattatacctgatggagctcagaagaaggaaagggcataaacaggt 19042975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 12587348 - 12587295
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    |||||||||||||||||||| |||||| || |||||| ||||||||| ||||||    
T  12587348 gagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaat 12587295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 19014331 - 19014274
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||||| ||||||||| || ||||  ||||||||||||||||||| |||||||||    
T  19014331 agattcaatggaagagattatatctgacagagctttgaagaaggaaagagcatagaca 19014274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 19528322 - 19528371
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||||||||||||||| || ||||||  ||||||||    
T  19528322 ggggagaatcgaacctgagaccttgaggaggagcacactcatagatccca 19528371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 28358695 - 28358740
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagaca 319  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||||    
T  28358695 agagattatacctgacggagctttgaagaaggaaagagcatagaca 28358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 1247191 - 1247155
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| |||||||||    
T  1247191 gagaatcgaacctgagaccttgaggaggagtacactc 1247155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 51052701 - 51052733
Alignment:
Q  290 ggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||||||||||||||||||||||    
T  51052701 ggagctttgaagaaggaaagtgcatagacaggt 51052733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 2799940 - 2799897
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatc 99  Q
    ||||||||||||||||||||||||||| || |||||| ||||||    
T  2799940 gagaatcgaacctgagaccttgaggaggagcacactcccagatc 2799897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 321
Target Start/End: Complemental strand, 30650347 - 30650308
Alignment:
Q  282 tacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  30650347 tacctaagggagctttgaagaaggaaagcgcatagacagg 30650308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 33142556 - 33142497
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||| ||||||||||  ||| || ||||||| ||||||||||||||||||| |||||    
T  33142556 agattcattagaagagataatacttgtgggagctctgaagaaggaaagtgcataaacagg 33142497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 39966174 - 39966135
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  39966174 ggggagaaacgaacctgagaccttgaggaggagtacactc 39966135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 8177180 - 8177226
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||||    
T  8177180 gagaatcgaacctgaaaccttgaggaggagcacactcccagatccca 8177226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 12690214 - 12690264
Alignment:
Q  329 ctttaggagaactagacaaccaccaaaagaaagaaatctactcttccaacc 379  Q
    |||||||||||||| || |||||| |||||||||  |||||||||||||||    
T  12690214 ctttaggagaactaaacgaccacccaaagaaagatttctactcttccaacc 12690264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 22049826 - 22049872
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||| || | |||||||||||||| ||||||||||||||||    
T  22049826 gagaatcgaatctcaaaccttgaggagaagcacactctcagatccca 22049872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 33700771 - 33700813
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagat 98  Q
    ||||||||||||||||||||||||||| || |||||| |||||    
T  33700771 gagaatcgaacctgagaccttgaggaggagcacactcccagat 33700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 4280449 - 4280502
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||| ||||||||||||| |||||||| |||||||||  ||||| ||||||    
T  4280449 gagaatcaaacctgagaccttcaggagaagcacactctcaagtcccaagtcaat 4280502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 8904492 - 8904439
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||| ||||||||||||||| || |||||| || |||||| ||||||    
T  8904492 gagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaat 8904439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 109
Target Start/End: Original strand, 14787334 - 14787387
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||||||| |||||||||||||  |||||||||| || || ||||||    
T  14787334 gagaatcgaacctgacaccttgaggagaaacacactctcaggtctcaagtcaat 14787387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 24047063 - 24047136
Alignment:
Q  20 gaagaagttaaattaaccaacctaaatcaaca-tggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||| |||||||||||   || ||||||||||||||| ||| |||| |||||| || ||||||    
T  24047063 gaagaagttaaattagccaacctaaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactc 24047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 27223124 - 27223181
Alignment:
Q  52 tggggagaatcgaacctgagaccttgaggagaagtacactctcagatcccacgtcaat 109  Q
    ||||||||||||||||||||||||||| ||  || |||||| ||||||| | ||||||    
T  27223124 tggggagaatcgaacctgagaccttgaagaagagcacactcccagatcctaagtcaat 27223181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 45266915 - 45266886
Alignment:
Q  53 ggggagaatcgaacctgagaccttgaggag 82  Q
    ||||||||||||||||||||||||||||||    
T  45266915 ggggagaatcgaacctgagaccttgaggag 45266886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 45271043 - 45271092
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||| ||||||| ||||| |||||||||||||| |||||||||||    
T  45271043 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacagg 45271092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 2220050 - 2220010
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcag 96  Q
    |||||||||||||||||||| ||||||||| ||||| ||||    
T  2220050 gagaatcgaacctgagacctcgaggagaagcacactttcag 2220010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 92
Target Start/End: Complemental strand, 3266002 - 3265966
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    ||||||||||||||||||||||||||| || ||||||    
T  3266002 gagaatcgaacctgagaccttgaggaggagcacactc 3265966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 13867176 - 13867128
Alignment:
Q  274 agagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||||| ||||||| ||||| |||||||||||||| ||||| ||||||    
T  13867176 agagattatacctgacggagccttgaagaaggaaagagcatatacaggt 13867128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 15174639 - 15174587
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaag 309  Q
    ||||||||||| |||||||| ||| |||||| ||| || ||||||||||||||    
T  15174639 aataaagattcgatagaagaaattatacctgtgggggccttgaagaaggaaag 15174587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 20987975 - 20988007
Alignment:
Q  290 ggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||||||||| ||||||||||||    
T  20987975 ggagctttgaagaaggaaagagcatagacaggt 20988007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 38947466 - 38947506
Alignment:
Q  52 tggggagaatcgaacctgagaccttgaggagaagtacactc 92  Q
    |||| |||||||||||||||||||||||||| || ||||||    
T  38947466 tgggaagaatcgaacctgagaccttgaggaggagcacactc 38947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 197 - 322
Target Start/End: Complemental strand, 15074 - 14949
Alignment:
Q  197 ttccaaccaatccaagtactttttctaagatcctcacttccaccctnnnnnnnnttaatcaataaagattcaatagaagagattgtacctgagggagctt 296  Q
    |||||||| ||||||||| ||||||||  ||||||||| |||||          ||| |||||||||||||||| ||||||||| ||||||  ||| |||    
T  15074 ttccaacctatccaagtaatttttctacaatcctcactcccacctcaaaagattttactcaataaagattcaatggaagagattatacctggtggatctt 14975  T
Q  297 tgaagaaggaaagtgcatagacaggt 322  Q
    ||||||||||||| ||||||||||||    
T  14974 tgaagaaggaaagagcatagacaggt 14949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 182902 - 182966
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    |||||||| | ||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||    
T  182902 aataaagaattaatggaagagattatacctaatggagctttgaagaaggaaagtgcatagacagg 182966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 334 - 395
Alignment:
Q  260 aaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||||| ||||||||| ||| ||| ||||||||||| |||||||| |||||||||||    
T  334 aaagattcaattgaagagattatacttgacggagctttgaaaaaggaaagagcatagacagg 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 8391 - 8456
Alignment:
Q  257 aataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    |||||||||||||  ||||| ||| ||||||| |||||||||||||| ||||| ||||||||||||    
T  8391 aataaagattcaagggaagaaattatacctgatggagctttgaagaaagaaagggcatagacaggt 8456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 317
Target Start/End: Complemental strand, 1141 - 1093
Alignment:
Q  269 atagaagagattgtacctgagggagctttgaagaaggaaagtgcataga 317  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  1141 atagaagagattatacctgatggagccttgaagaaggaaagtgcataga 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 2464 - 2512
Alignment:
Q  52 tggggagaatcgaacctgagaccttgaggagaagtacactctcagatcc 100  Q
    ||||||||||||||||||||||||||||||| || |||||| |||||||    
T  2464 tggggagaatcgaacctgagaccttgaggaggagcacactcccagatcc 2512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 8338 - 8383
Alignment:
Q  276 agattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||    
T  8338 agattatacctgatggagctttgaagaaggaaagcgcatagacagg 8383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 321
Target Start/End: Original strand, 13272 - 13317
Alignment:
Q  276 agattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||    
T  13272 agattatacctgatggagctttgaagaaggaaagcgcatagacagg 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 13044 - 13087
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatc 99  Q
    ||||||||||||||||||||||||||| || |||||| ||||||    
T  13044 gagaatcgaacctgagaccttgaggaggagcacactcccagatc 13087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 321
Target Start/End: Complemental strand, 63648 - 63589
Alignment:
Q  262 agattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||||||| ||||||||| ||||||| | ||| |||||||||||||| ||||| |||||    
T  63648 agattcaatggaagagattatacctgaagaagccttgaagaaggaaagagcataaacagg 63589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 11606 - 11560
Alignment:
Q  56 gagaatcgaacctgagaccttgaggagaagtacactctcagatccca 102  Q
    |||||||||||||||||||| |||||| || |||||| |||||||||    
T  11606 gagaatcgaacctgagacctcgaggaggagcacactcccagatccca 11560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 3907 - 3837
Alignment:
Q  251 ttaatcaataaagattcaatagaagagattgtacctgagggagctttgaagaaggaaagtgcatagacagg 321  Q
    ||||| |||||||| ||||  ||||| | | ||||||| |||||||||||||| ||||| |||||||||||    
T  3907 ttaataaataaagagtcaagggaagaaagtatacctgatggagctttgaagaaagaaagggcatagacagg 3837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 28576 - 28626
Alignment:
Q  272 gaagagattgtacctgagggagctttgaagaaggaaagtgcatagacaggt 322  Q
    ||||| ||| ||||||| ||||| |||||||||||||| ||||||||||||    
T  28576 gaagaaattatacctgacggagccttgaagaaggaaagagcatagacaggt 28626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University