View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19101_low_3 (Length: 307)

Name: NF19101_low_3
Description: NF19101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19101_low_3
NF19101_low_3
[»] chr7 (74 HSPs)
chr7 (144-302)||(22297994-22298152)
chr7 (111-302)||(1741956-1742147)
chr7 (144-302)||(42879929-42880087)
chr7 (144-302)||(13405122-13405280)
chr7 (144-302)||(45948625-45948783)
chr7 (151-302)||(27947496-27947647)
chr7 (144-302)||(31418508-31418666)
chr7 (144-302)||(37815722-37815880)
chr7 (144-302)||(24680126-24680284)
chr7 (144-307)||(40339457-40339619)
chr7 (144-302)||(35777817-35777975)
chr7 (149-302)||(48684726-48684879)
chr7 (144-302)||(23935420-23935577)
chr7 (152-302)||(29530930-29531080)
chr7 (151-307)||(10476141-10476296)
chr7 (152-302)||(44453141-44453289)
chr7 (144-302)||(27935765-27935923)
chr7 (150-307)||(28289219-28289375)
chr7 (151-304)||(40753423-40753574)
chr7 (144-304)||(19104995-19105154)
chr7 (144-304)||(24133122-24133283)
chr7 (144-303)||(37490782-37490944)
chr7 (144-302)||(41137726-41137884)
chr7 (144-307)||(48843550-48843715)
chr7 (112-307)||(21752102-21752296)
chr7 (144-302)||(45933584-45933737)
chr7 (144-307)||(1031153-1031315)
chr7 (144-307)||(21819282-21819443)
chr7 (144-302)||(36807933-36808090)
chr7 (144-307)||(33939724-33939887)
chr7 (149-307)||(29636217-29636375)
chr7 (151-307)||(6563409-6563560)
chr7 (144-307)||(8293059-8293220)
chr7 (145-248)||(10599212-10599315)
chr7 (144-303)||(45499819-45499980)
chr7 (151-272)||(30312463-30312583)
chr7 (144-258)||(8603973-8604086)
chr7 (144-253)||(715908-716016)
chr7 (144-253)||(12977731-12977839)
chr7 (211-302)||(23155457-23155547)
chr7 (144-253)||(42285906-42286014)
chr7 (151-297)||(7759267-7759410)
chr7 (158-253)||(25440884-25440978)
chr7 (144-223)||(34274792-34274871)
chr7 (144-253)||(2297036-2297149)
chr7 (148-304)||(18270579-18270725)
chr7 (144-305)||(18292333-18292483)
chr7 (152-304)||(31196575-31196725)
chr7 (249-307)||(34012559-34012617)
chr7 (148-253)||(37502321-37502425)
chr7 (144-253)||(44567086-44567194)
chr7 (144-287)||(42753706-42753845)
chr7 (151-253)||(31929905-31930006)
chr7 (144-225)||(34012159-34012240)
chr7 (144-279)||(4268609-4268744)
chr7 (144-248)||(6747225-6747327)
chr7 (15-79)||(22296925-22296989)
chr7 (235-307)||(25055870-25055942)
chr7 (247-302)||(10599464-10599519)
chr7 (245-307)||(47461365-47461427)
chr7 (179-265)||(16564799-16564885)
chr7 (179-265)||(16600777-16600863)
chr7 (239-307)||(7335372-7335441)
chr7 (144-245)||(33682527-33682627)
chr7 (144-307)||(24780309-24780459)
chr7 (146-194)||(40927163-40927211)
chr7 (244-306)||(47187749-47187811)
chr7 (242-307)||(19303385-19303450)
chr7 (144-305)||(7899927-7900087)
chr7 (144-191)||(32501855-32501902)
chr7 (151-202)||(39557327-39557378)
chr7 (262-302)||(7795238-7795278)
chr7 (144-202)||(8334367-8334425)
chr7 (185-253)||(31883823-31883890)
[»] chr6 (49 HSPs)
chr6 (110-302)||(233997-234190)
chr6 (144-302)||(23259322-23259480)
chr6 (144-307)||(9940646-9940808)
chr6 (148-302)||(19674982-19675134)
chr6 (144-302)||(24163711-24163869)
chr6 (148-302)||(29713403-29713557)
chr6 (144-302)||(31443442-31443601)
chr6 (145-307)||(13503836-13504002)
chr6 (148-304)||(12459314-12459469)
chr6 (180-302)||(1134959-1135081)
chr6 (144-307)||(577059-577222)
chr6 (144-307)||(3988736-3988896)
chr6 (151-302)||(24555924-24556076)
chr6 (148-307)||(12322876-12323035)
chr6 (144-280)||(32193700-32193835)
chr6 (144-307)||(17552239-17552400)
chr6 (144-300)||(18737087-18737245)
chr6 (144-251)||(12063558-12063665)
chr6 (204-294)||(10540481-10540571)
chr6 (228-307)||(20226213-20226292)
chr6 (228-307)||(22120197-22120276)
chr6 (144-223)||(29399944-29400023)
chr6 (144-305)||(4850500-4850650)
chr6 (151-307)||(13011340-13011494)
chr6 (211-307)||(1502745-1502840)
chr6 (211-307)||(17828348-17828443)
chr6 (147-218)||(8030643-8030714)
chr6 (144-303)||(31233618-31233780)
chr6 (105-221)||(10520717-10520833)
chr6 (151-304)||(12588531-12588682)
chr6 (211-300)||(16128006-16128094)
chr6 (173-297)||(17267609-17267733)
chr6 (235-307)||(21271395-21271466)
chr6 (163-247)||(34513655-34513739)
chr6 (244-307)||(8957865-8957928)
chr6 (244-307)||(8961429-8961492)
chr6 (240-307)||(32619817-32619884)
chr6 (220-302)||(10520387-10520469)
chr6 (208-257)||(17246678-17246727)
chr6 (144-221)||(32429282-32429359)
chr6 (239-307)||(3847744-3847812)
chr6 (175-223)||(19689359-19689407)
chr6 (144-267)||(19600419-19600541)
chr6 (144-218)||(10540590-10540663)
chr6 (264-307)||(32193927-32193970)
chr6 (144-221)||(21272180-21272257)
chr6 (152-223)||(20226557-20226627)
chr6 (152-223)||(22120541-22120611)
chr6 (145-202)||(1502836-1502893)
[»] chr4 (77 HSPs)
chr4 (110-302)||(19878612-19878804)
chr4 (144-302)||(52957791-52957949)
chr4 (112-302)||(1819528-1819718)
chr4 (144-302)||(20448037-20448195)
chr4 (144-302)||(45043589-45043747)
chr4 (144-302)||(40345348-40345506)
chr4 (144-302)||(49080478-49080635)
chr4 (148-302)||(2728399-2728553)
chr4 (112-302)||(37654376-37654566)
chr4 (144-302)||(52848055-52848213)
chr4 (144-307)||(10573151-10573313)
chr4 (144-302)||(44571866-44572024)
chr4 (144-302)||(49089462-49089619)
chr4 (144-302)||(53814498-53814656)
chr4 (144-302)||(19930712-19930870)
chr4 (144-307)||(47817736-47817899)
chr4 (144-302)||(24940877-24941036)
chr4 (144-307)||(30261257-30261419)
chr4 (144-302)||(52253843-52254004)
chr4 (144-302)||(2493100-2493258)
chr4 (144-307)||(19451201-19451370)
chr4 (144-302)||(41920310-41920468)
chr4 (151-302)||(34316227-34316378)
chr4 (144-302)||(29519526-29519684)
chr4 (144-302)||(54042184-54042342)
chr4 (144-307)||(50203074-50203234)
chr4 (144-302)||(27653674-27653830)
chr4 (151-302)||(29370608-29370759)
chr4 (144-302)||(50623081-50623240)
chr4 (101-307)||(41496159-41496365)
chr4 (144-304)||(8971040-8971200)
chr4 (152-304)||(45839643-45839795)
chr4 (144-302)||(40010873-40011033)
chr4 (151-302)||(18429995-18430145)
chr4 (151-302)||(56373576-56373729)
chr4 (157-302)||(42605584-42605728)
chr4 (111-307)||(46392059-46392253)
chr4 (144-302)||(28734596-28734754)
chr4 (151-304)||(6991262-6991413)
chr4 (144-301)||(40837128-40837287)
chr4 (151-307)||(52162111-52162264)
chr4 (144-302)||(38991764-38991923)
chr4 (144-307)||(11364224-11364386)
chr4 (144-307)||(34413543-34413706)
chr4 (151-306)||(44868249-44868397)
chr4 (151-307)||(620172-620330)
chr4 (145-304)||(56460082-56460243)
chr4 (147-253)||(7906047-7906152)
chr4 (144-253)||(22220410-22220518)
chr4 (157-270)||(25123760-25123872)
chr4 (144-253)||(37624554-37624662)
chr4 (144-307)||(47458383-47458544)
chr4 (144-305)||(4505335-4505484)
chr4 (144-253)||(25231173-25231281)
chr4 (144-253)||(52915593-52915701)
chr4 (151-307)||(44650893-44651048)
chr4 (149-216)||(39982106-39982173)
chr4 (223-302)||(39984894-39984973)
chr4 (151-253)||(21864434-21864535)
chr4 (151-253)||(21920295-21920396)
chr4 (239-307)||(30780016-30780085)
chr4 (144-253)||(51733545-51733653)
chr4 (144-221)||(27943627-27943705)
chr4 (153-304)||(36558299-36558452)
chr4 (110-220)||(31917920-31918030)
chr4 (227-307)||(44061073-44061154)
chr4 (169-253)||(38510296-38510379)
chr4 (149-200)||(50621290-50621341)
chr4 (144-225)||(24157183-24157264)
chr4 (249-307)||(19903199-19903257)
chr4 (144-209)||(44061006-44061071)
chr4 (196-277)||(18052999-18053079)
chr4 (171-217)||(30780218-30780264)
chr4 (144-219)||(33033076-33033156)
chr4 (204-306)||(9809621-9809722)
chr4 (152-224)||(47774865-47774938)
chr4 (144-184)||(55092567-55092607)
[»] chr8 (56 HSPs)
chr8 (111-302)||(39698663-39698854)
chr8 (111-302)||(4989443-4989634)
chr8 (144-302)||(40228572-40228730)
chr8 (111-302)||(9880498-9880689)
chr8 (104-302)||(43084624-43084821)
chr8 (144-302)||(17920954-17921113)
chr8 (144-302)||(39463257-39463413)
chr8 (144-302)||(43448714-43448872)
chr8 (144-302)||(29025746-29025901)
chr8 (144-307)||(6374412-6374573)
chr8 (144-302)||(4760556-4760713)
chr8 (152-302)||(31899245-31899395)
chr8 (144-302)||(9304631-9304788)
chr8 (144-302)||(7839456-7839614)
chr8 (144-307)||(9812171-9812333)
chr8 (144-302)||(31693616-31693776)
chr8 (151-307)||(514879-515037)
chr8 (151-306)||(34156539-34156694)
chr8 (144-300)||(44713532-44713688)
chr8 (149-303)||(5295402-5295556)
chr8 (144-307)||(45358887-45359049)
chr8 (144-307)||(34796674-34796833)
chr8 (144-271)||(19438234-19438362)
chr8 (144-271)||(19574384-19574512)
chr8 (144-307)||(13367941-13368103)
chr8 (151-307)||(13496240-13496398)
chr8 (144-307)||(14234208-14234373)
chr8 (144-307)||(15227565-15227730)
chr8 (151-307)||(29312185-29312341)
chr8 (144-253)||(39765907-39766014)
chr8 (144-305)||(15160451-15160601)
chr8 (172-302)||(5790643-5790775)
chr8 (144-291)||(6116020-6116160)
chr8 (144-223)||(40362433-40362512)
chr8 (197-304)||(15750325-15750435)
chr8 (209-307)||(40399870-40399967)
chr8 (144-253)||(17655906-17656013)
chr8 (147-230)||(35356308-35356391)
chr8 (154-305)||(31233934-31234084)
chr8 (165-306)||(41679338-41679471)
chr8 (235-307)||(43970044-43970116)
chr8 (144-307)||(2375839-2375996)
chr8 (144-223)||(37559609-37559688)
chr8 (144-253)||(396261-396369)
chr8 (244-302)||(36669791-36669849)
chr8 (151-223)||(36921362-36921434)
chr8 (147-202)||(43974888-43974943)
chr8 (206-303)||(42179155-42179251)
chr8 (144-223)||(43724379-43724459)
chr8 (239-305)||(43561415-43561481)
chr8 (151-209)||(40400066-40400124)
chr8 (151-193)||(43561344-43561386)
chr8 (167-220)||(44342865-44342918)
chr8 (145-209)||(40400441-40400505)
chr8 (151-202)||(43594834-43594885)
chr8 (151-221)||(12339716-12339787)
[»] chr2 (86 HSPs)
chr2 (144-302)||(12342091-12342249)
chr2 (144-302)||(441228-441386)
chr2 (144-302)||(29396677-29396835)
chr2 (144-302)||(38926604-38926762)
chr2 (147-302)||(45081897-45082052)
chr2 (152-306)||(18719426-18719579)
chr2 (144-302)||(4133022-4133178)
chr2 (144-302)||(29808810-29808969)
chr2 (144-302)||(4288708-4288866)
chr2 (144-302)||(6220401-6220559)
chr2 (144-302)||(13561992-13562150)
chr2 (144-302)||(32228008-32228166)
chr2 (144-307)||(37038762-37038921)
chr2 (144-302)||(25383482-25383639)
chr2 (161-302)||(1423206-1423347)
chr2 (146-302)||(30855105-30855261)
chr2 (144-307)||(18579165-18579322)
chr2 (144-307)||(4658224-4658388)
chr2 (144-304)||(12565976-12566135)
chr2 (144-302)||(16807514-16807672)
chr2 (144-302)||(16846795-16846953)
chr2 (144-302)||(12393916-12394076)
chr2 (144-307)||(8540036-8540199)
chr2 (151-302)||(42004896-42005046)
chr2 (147-307)||(19164358-19164514)
chr2 (144-302)||(8774054-8774208)
chr2 (144-302)||(8789427-8789581)
chr2 (157-302)||(42753756-42753903)
chr2 (144-304)||(43971502-43971646)
chr2 (144-302)||(36106400-36106554)
chr2 (144-299)||(43480870-43481026)
chr2 (144-267)||(7028845-7028967)
chr2 (144-307)||(36685734-36685895)
chr2 (144-307)||(33482222-33482384)
chr2 (144-253)||(43427334-43427442)
chr2 (144-277)||(29411694-29411826)
chr2 (197-302)||(42743080-42743184)
chr2 (144-267)||(7042219-7042341)
chr2 (204-307)||(10195733-10195835)
chr2 (151-253)||(16463079-16463180)
chr2 (151-304)||(40608601-40608751)
chr2 (144-253)||(45301763-45301871)
chr2 (145-225)||(27964444-27964524)
chr2 (211-307)||(33055956-33056051)
chr2 (216-302)||(34546145-34546232)
chr2 (144-253)||(4051750-4051859)
chr2 (144-253)||(17695872-17695980)
chr2 (144-253)||(22620381-22620489)
chr2 (144-221)||(36177974-36178051)
chr2 (205-307)||(27726412-27726511)
chr2 (144-305)||(35799201-35799350)
chr2 (144-221)||(4469499-4469576)
chr2 (144-304)||(11132548-11132708)
chr2 (147-247)||(11188545-11188644)
chr2 (144-307)||(15083157-15083307)
chr2 (144-220)||(34546410-34546486)
chr2 (209-304)||(7872772-7872866)
chr2 (151-221)||(7644651-7644721)
chr2 (225-302)||(19636587-19636664)
chr2 (225-302)||(19835180-19835257)
chr2 (242-307)||(27964217-27964282)
chr2 (244-307)||(11188242-11188305)
chr2 (147-222)||(14285939-14286014)
chr2 (144-207)||(16792481-16792544)
chr2 (145-253)||(5717512-5717618)
chr2 (144-305)||(28072565-28072718)
chr2 (146-253)||(45423618-45423724)
chr2 (147-221)||(9391636-9391710)
chr2 (144-198)||(17703017-17703071)
chr2 (151-223)||(7874720-7874791)
chr2 (197-294)||(19469575-19469673)
chr2 (144-214)||(10195572-10195642)
chr2 (144-251)||(777768-777879)
chr2 (144-197)||(14833837-14833890)
chr2 (144-221)||(35046516-35046593)
chr2 (227-302)||(18717157-18717232)
chr2 (144-305)||(27986034-27986186)
chr2 (248-307)||(34455793-34455852)
chr2 (265-307)||(14833752-14833794)
chr2 (248-298)||(27726542-27726592)
chr2 (277-307)||(9391586-9391616)
chr2 (151-181)||(34035865-34035895)
chr2 (276-305)||(29412113-29412142)
chr2 (144-193)||(32254591-32254639)
chr2 (167-220)||(34455011-34455064)
chr2 (144-188)||(9366230-9366274)
[»] chr5 (70 HSPs)
chr5 (144-302)||(2729783-2729941)
chr5 (144-302)||(34446024-34446182)
chr5 (144-302)||(39566181-39566339)
chr5 (144-302)||(42104060-42104218)
chr5 (144-302)||(6518974-6519133)
chr5 (151-302)||(3306006-3306157)
chr5 (147-302)||(14620491-14620646)
chr5 (144-302)||(26660753-26660910)
chr5 (144-302)||(26932346-26932503)
chr5 (151-307)||(36164892-36165047)
chr5 (147-302)||(8336404-8336561)
chr5 (144-302)||(21319309-21319465)
chr5 (151-302)||(42661937-42662087)
chr5 (165-303)||(14005911-14006049)
chr5 (151-307)||(27797786-27797938)
chr5 (145-305)||(15167006-15167164)
chr5 (148-307)||(11977590-11977748)
chr5 (111-302)||(21375647-21375839)
chr5 (151-304)||(34534365-34534516)
chr5 (144-257)||(13761555-13761668)
chr5 (182-302)||(39335200-39335321)
chr5 (144-302)||(39504720-39504881)
chr5 (151-302)||(29807311-29807465)
chr5 (144-307)||(843019-843178)
chr5 (144-302)||(4424975-4425130)
chr5 (145-307)||(38362130-38362291)
chr5 (144-307)||(38369871-38370032)
chr5 (147-302)||(39729960-39730102)
chr5 (116-307)||(7721066-7721255)
chr5 (164-302)||(27600417-27600550)
chr5 (111-302)||(42978070-42978254)
chr5 (144-253)||(10344979-10345087)
chr5 (151-307)||(14161893-14162049)
chr5 (144-266)||(34208926-34209052)
chr5 (176-307)||(1309351-1309481)
chr5 (144-223)||(7317026-7317105)
chr5 (144-253)||(3024978-3025086)
chr5 (151-306)||(13974282-13974433)
chr5 (166-302)||(34972647-34972775)
chr5 (148-223)||(35765976-35766051)
chr5 (106-221)||(7579947-7580062)
chr5 (228-304)||(4911110-4911187)
chr5 (144-253)||(25362847-25362955)
chr5 (162-306)||(7748891-7749034)
chr5 (190-307)||(28591615-28591735)
chr5 (228-307)||(7736455-7736534)
chr5 (151-253)||(4630870-4630971)
chr5 (147-225)||(21195380-21195458)
chr5 (144-221)||(4911228-4911305)
chr5 (144-253)||(43584423-43584532)
chr5 (250-307)||(7579586-7579643)
chr5 (144-221)||(9066501-9066578)
chr5 (144-221)||(36073708-36073785)
chr5 (211-307)||(21634177-21634271)
chr5 (211-307)||(21642424-21642518)
chr5 (144-208)||(24280991-24281055)
chr5 (144-208)||(24381157-24381221)
chr5 (151-307)||(24281102-24281260)
chr5 (151-307)||(24380951-24381109)
chr5 (198-303)||(41645292-41645392)
chr5 (249-302)||(13761823-13761876)
chr5 (159-221)||(891091-891154)
chr5 (155-221)||(40776653-40776720)
chr5 (151-221)||(25768511-25768580)
chr5 (247-307)||(11195175-11195235)
chr5 (175-223)||(32158589-32158637)
chr5 (151-189)||(31041932-31041970)
chr5 (264-305)||(7317135-7317176)
chr5 (144-181)||(39804166-39804203)
chr5 (171-224)||(2329097-2329152)
[»] chr3 (70 HSPs)
chr3 (111-302)||(38016340-38016530)
chr3 (144-302)||(51398008-51398166)
chr3 (110-302)||(30431084-30431276)
chr3 (144-302)||(44676219-44676377)
chr3 (144-302)||(47895338-47895496)
chr3 (111-302)||(45213716-45213906)
chr3 (144-302)||(11393543-11393701)
chr3 (144-302)||(33194025-33194183)
chr3 (145-302)||(36460805-36460961)
chr3 (144-302)||(3152801-3152958)
chr3 (144-300)||(50088312-50088468)
chr3 (144-302)||(30426317-30426476)
chr3 (111-302)||(32492176-32492364)
chr3 (144-307)||(30315307-30315470)
chr3 (144-304)||(36844735-36844894)
chr3 (144-302)||(2458005-2458164)
chr3 (144-307)||(19373584-19373746)
chr3 (144-302)||(23525310-23525468)
chr3 (146-302)||(38363785-38363947)
chr3 (144-302)||(41287490-41287651)
chr3 (144-302)||(31853556-31853714)
chr3 (144-302)||(53200675-53200832)
chr3 (144-302)||(47137961-47138121)
chr3 (151-302)||(33024294-33024445)
chr3 (149-280)||(36729826-36729957)
chr3 (144-307)||(42071983-42072145)
chr3 (144-290)||(35557764-35557910)
chr3 (145-307)||(38140949-38141110)
chr3 (151-307)||(9189425-9189580)
chr3 (144-304)||(48903284-48903443)
chr3 (147-307)||(40487829-40487988)
chr3 (144-307)||(30934799-30934958)
chr3 (144-285)||(48901718-48901858)
chr3 (144-302)||(41850388-41850537)
chr3 (171-302)||(45566824-45566955)
chr3 (144-305)||(50346624-50346783)
chr3 (145-303)||(7230888-7231047)
chr3 (111-239)||(39356849-39356978)
chr3 (144-277)||(4392194-4392326)
chr3 (144-253)||(42571573-42571681)
chr3 (144-253)||(50038215-50038323)
chr3 (145-305)||(8817139-8817299)
chr3 (199-302)||(13756867-13756970)
chr3 (224-302)||(39358998-39359076)
chr3 (144-253)||(50646154-50646262)
chr3 (175-307)||(27067637-27067766)
chr3 (144-267)||(22857088-22857210)
chr3 (172-302)||(51481961-51482091)
chr3 (144-305)||(19115385-19115534)
chr3 (144-306)||(42886749-42886898)
chr3 (144-223)||(4758989-4759068)
chr3 (144-225)||(11019897-11019978)
chr3 (196-302)||(36381366-36381474)
chr3 (144-253)||(31583478-31583586)
chr3 (111-200)||(23208387-23208474)
chr3 (242-302)||(39168802-39168862)
chr3 (144-278)||(47823466-47823603)
chr3 (239-302)||(45518478-45518541)
chr3 (249-307)||(40717660-40717717)
chr3 (152-202)||(52654310-52654360)
chr3 (148-226)||(45460665-45460743)
chr3 (263-302)||(36729766-36729805)
chr3 (242-304)||(3985946-3986008)
chr3 (245-302)||(45391952-45392008)
chr3 (264-307)||(47823406-47823449)
chr3 (246-300)||(26057748-26057802)
chr3 (144-181)||(42939967-42940004)
chr3 (144-181)||(51058267-51058304)
chr3 (144-192)||(51324143-51324191)
chr3 (151-219)||(54403341-54403409)
[»] chr1 (78 HSPs)
chr1 (144-307)||(29567894-29568056)
chr1 (111-302)||(32806933-32807125)
chr1 (144-302)||(15823032-15823190)
chr1 (144-302)||(49468706-49468864)
chr1 (144-296)||(9915441-9915593)
chr1 (147-302)||(10842781-10842936)
chr1 (144-302)||(5463573-5463731)
chr1 (144-302)||(31491765-31491923)
chr1 (111-302)||(46045938-46046129)
chr1 (144-302)||(48009008-48009166)
chr1 (144-302)||(48025249-48025407)
chr1 (144-307)||(27208987-27209149)
chr1 (149-302)||(50094232-50094386)
chr1 (144-302)||(44108597-44108757)
chr1 (144-302)||(35847931-35848086)
chr1 (148-302)||(24611514-24611669)
chr1 (144-302)||(31798587-31798746)
chr1 (145-307)||(26595060-26595221)
chr1 (151-301)||(46286814-46286964)
chr1 (144-302)||(52125131-52125289)
chr1 (144-302)||(15573605-15573769)
chr1 (161-302)||(43759347-43759488)
chr1 (154-295)||(34110535-34110676)
chr1 (145-302)||(49426414-49426565)
chr1 (144-302)||(1740635-1740794)
chr1 (144-307)||(25560863-25561026)
chr1 (144-307)||(16757189-16757347)
chr1 (144-265)||(26755218-26755338)
chr1 (152-302)||(25151821-25151966)
chr1 (144-307)||(18794533-18794694)
chr1 (172-307)||(31699280-31699414)
chr1 (145-304)||(49900750-49900910)
chr1 (165-302)||(52066285-52066420)
chr1 (151-307)||(8895006-8895161)
chr1 (144-267)||(46554796-46554918)
chr1 (144-307)||(7191197-7191360)
chr1 (148-225)||(40717368-40717445)
chr1 (144-253)||(50249308-50249416)
chr1 (151-254)||(25487093-25487195)
chr1 (144-251)||(43358246-43358353)
chr1 (163-307)||(2610823-2610964)
chr1 (111-245)||(38531349-38531483)
chr1 (144-223)||(26352155-26352234)
chr1 (145-302)||(7214034-7214185)
chr1 (144-253)||(13408309-13408418)
chr1 (144-223)||(34047309-34047388)
chr1 (144-305)||(34032083-34032233)
chr1 (145-307)||(51244826-51244988)
chr1 (151-307)||(8989630-8989781)
chr1 (144-223)||(12591156-12591235)
chr1 (151-253)||(27720963-27721064)
chr1 (151-307)||(33622349-33622511)
chr1 (144-223)||(52024308-52024387)
chr1 (144-253)||(12484673-12484781)
chr1 (144-225)||(44557116-44557197)
chr1 (211-307)||(5044-5139)
chr1 (242-302)||(38530834-38530894)
chr1 (144-216)||(44258588-44258660)
chr1 (144-255)||(39477751-39477860)
chr1 (235-305)||(5225818-5225888)
chr1 (169-307)||(9092618-9092752)
chr1 (151-233)||(24884420-24884502)
chr1 (174-307)||(28538232-28538365)
chr1 (144-218)||(30292938-30293012)
chr1 (151-305)||(14373416-14373559)
chr1 (152-211)||(14593406-14593465)
chr1 (235-304)||(46271016-46271086)
chr1 (144-208)||(24483386-24483450)
chr1 (145-221)||(49402947-49403023)
chr1 (151-306)||(11799466-11799620)
chr1 (146-225)||(46271389-46271468)
chr1 (144-218)||(52706880-52706953)
chr1 (145-221)||(39125647-39125723)
chr1 (255-307)||(44557060-44557112)
chr1 (247-304)||(38947695-38947751)
chr1 (144-187)||(38947653-38947696)
chr1 (273-307)||(33694413-33694447)
chr1 (151-227)||(17504476-17504552)
[»] scaffold0110 (1 HSPs)
scaffold0110 (144-302)||(24737-24895)
[»] scaffold0294 (1 HSPs)
scaffold0294 (147-302)||(3501-3656)
[»] scaffold0565 (2 HSPs)
scaffold0565 (144-302)||(9639-9796)
scaffold0565 (144-307)||(9947-10110)
[»] scaffold0048 (1 HSPs)
scaffold0048 (144-302)||(62631-62789)
[»] scaffold0015 (1 HSPs)
scaffold0015 (151-302)||(21078-21229)
[»] scaffold0502 (1 HSPs)
scaffold0502 (151-304)||(567-719)
[»] scaffold0182 (1 HSPs)
scaffold0182 (148-307)||(18247-18405)
[»] scaffold0300 (1 HSPs)
scaffold0300 (147-307)||(4566-4725)
[»] scaffold0983 (1 HSPs)
scaffold0983 (144-307)||(679-841)
[»] scaffold0026 (1 HSPs)
scaffold0026 (151-304)||(4145-4298)
[»] scaffold0078 (1 HSPs)
scaffold0078 (110-265)||(1446-1602)
[»] scaffold0332 (1 HSPs)
scaffold0332 (144-253)||(3857-3965)
[»] scaffold0136 (2 HSPs)
scaffold0136 (204-307)||(9602-9705)
scaffold0136 (171-217)||(9470-9516)
[»] scaffold2107 (2 HSPs)
scaffold2107 (151-223)||(589-661)
scaffold2107 (265-301)||(382-418)
[»] scaffold0010 (1 HSPs)
scaffold0010 (144-215)||(153311-153382)
[»] scaffold0039 (1 HSPs)
scaffold0039 (144-188)||(75410-75454)
[»] scaffold0013 (1 HSPs)
scaffold0013 (144-177)||(45392-45425)


Alignment Details
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 22297994 - 22298152
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  22297994 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaactgtacccttcagttaatactatgttacactacttccaaag 22298093  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22298094 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 22298152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 111 - 302
Target Start/End: Original strand, 1741956 - 1742147
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  1741956 gtttcaaaatgagtgtcgttttagcccaaaaagttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttcttttcaattgtaccc 1742055  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1742056 ttcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 1742147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 42880087 - 42879929
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  42880087 ttgtttcaaaatgaatgtcactttcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 42879988  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  42879987 aattattttttctttaatgaaaaacaaactaatagttgattacgataatttggtaaaat 42879929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 13405280 - 13405122
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  13405280 ttgttttaaaatgaatgtcactttcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 13405181  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13405180 tattgttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 13405122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 45948783 - 45948625
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||     
T  45948783 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacattacttccaaaa 45948684  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  45948683 tattattttttctttaatgaaaaacaaaccaatggttgattacgataatttggtaaaat 45948625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 27947647 - 27947496
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| ||||||||| || |||    
T  27947647 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatattatgctacactacttccaaaggatgatt 27947548  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27947547 ttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaat 27947496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 31418666 - 31418508
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| |||  |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  31418666 ttgtttcaaaataaattccactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 31418567  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||    
T  31418566 tattattttttctttaattaaaaacaaattaatagttgattaggataatttggtgaaat 31418508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 37815722 - 37815880
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||| |||||| ||| |||| ||||||||| ||||||||||||| | |||||||||||||||||||||||||||| ||| |||||    
T  37815722 ttgtttcaaaatgaatgtcgctttcaatttccaatacaataataattttttcttttcaattatacccttcaattaatactatgttacactactttcaaag 37815821  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37815822 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 37815880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 24680126 - 24680284
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||| || | |||||||||    
T  24680126 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctttaattaatgctatgttgcattacttccaaag 24680225  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  24680226 tattattttttctttaatgaaaaacaaatcaatagttgattagaataatttggtaaaat 24680284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 40339457 - 40339619
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||||||||| |||  |||||| |||||||||    
T  40339457 ttgtttcaaaatgactgtcactttcaattttcaatgcaataataactttat-ttttcaattgtacccttcaattaatattattatacactacttccaaag 40339555  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40339556 tattcttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 40339619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 35777817 - 35777975
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| |||||||||||| ||||  ||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||||||| |||||||||    
T  35777817 ttgtttcaaaataaatgtcactttcggtttctaatgcaataataactttttattttcaattgtacccttcaattagtactatattacactacttccaaag 35777916  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  35777917 tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaat 35777975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 48684726 - 48684879
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta 248  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| ||||||||||    
T  48684726 tcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacaccactttcaaagtatta 48684825  T
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||    
T  48684826 ttttttctttaataaaaaacaaatcaatagatgataaggataatttggtaaaat 48684879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 23935420 - 23935577
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||    
T  23935420 ttgttttaaaataaatgtcgttttcagtttccaatgcaataataactttttcttttcaa-tgtacccttcaattaatactatgttacactacttccgaag 23935518  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  23935519 gattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaat 23935577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 152 - 302
Target Start/End: Complemental strand, 29531080 - 29530930
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||  ||| |||||||||||||    
T  29531080 aaatgaatgtcattttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacaccactttcaaagtattattt 29530981  T
Q  252 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  29530980 tttcttcaataaaaaacaaatcaatagttgattaggatgatttggtaaaat 29530930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 10476141 - 10476296
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  10476141 aaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaagtattatt 10476239  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | || |||| | ||||||||||||||||||||||||||||||||| |||||||||||    
T  10476240 tattttttagtaaaaaacaaatcaatagttgattaggataatttgataaaataacat 10476296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 152 - 302
Target Start/End: Original strand, 44453141 - 44453289
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    |||||||||||||||||||||| |||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  44453141 aaatgaatgtcactttcagtttccaatgcaataataactttcttttttcaattgtacccttcaattaatactatgttacactacttctaaagtattattt 44453240  T
Q  252 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||  |||||||||||||||| |||||| |||||||||||||||||||||||    
T  44453241 tt--tttaatgaaaaacaaaccaataggtgattaggataatttggtaaaat 44453289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 27935765 - 27935923
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||| | || ||||||||||| |||| ||| |||||||||    
T  27935765 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttatcttcaattgtatcatttaattaatactacgttaaactacttccaaag 27935864  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  27935865 tattattttttctttaatgaaaaacaaatcaatagttaattaagctaatttggtaaaat 27935923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 150 - 307
Target Start/End: Original strand, 28289219 - 28289375
Alignment:
Q  150 caaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    |||||| ||||||||||| ||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||| | ||||| ||| |||||||||||    
T  28289219 caaaataaatgtcactttgagttttcaatgcaataataacattttcttttcaattgtacc-ttcaattaatactatat-acactactttcaaagtattat 28289316  T
Q  250 ttt-ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28289317 ttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 28289375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 40753574 - 40753423
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||  |||||| ||| |||||||||| |    
T  40753574 aaaatgaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtaccattcaattaatactat-atacactactttcaaagtatta-t 40753477  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  40753476 ttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataa 40753423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 19105154 - 19104995
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| | |||  |||     
T  19105154 ttgttttaaaatgaatgtcactttcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacattacttttaaaa 19105056  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
     |||||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||    
T  19105055 cattattttttctttaatgaagaacaaatcaatagttgattaggattacttgataaaataa 19104995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 24133283 - 24133122
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||| |||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||  || ||| | ||||||     
T  24133283 ttgttttaaactgaacgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactat-atatactacatccaaaa 24133185  T
Q  244 tattattttttctttaatgaaaaacaaatcaat--agttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||    
T  24133184 tattattttttctttaatgaaaaacaaatcaatacagttgattagtataatttggtaaaataa 24133122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 303
Target Start/End: Original strand, 37490782 - 37490944
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgt--tacactgcttccaa 241  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||| |  |||||| |||  ||    
T  37490782 ttgtatcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacctttcaattaatactatatagtacactacttggaa 37490881  T
Q  242 agtatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    ||||||| |||||||||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  37490882 agtattatttttttctttaatgaaaaacaaactaatagtttattaagataatttggtaaaata 37490944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 41137726 - 41137884
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||| |||||||| |||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||||||    
T  41137726 ttgtttcacaatgaatgccacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattgatactatgttacactacttccaaag 41137825  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || || |||||||||||||| ||| |||| || |||||||||||||||||||||||||||    
T  41137826 taatatttttttctttaatg-aaatcaaaccagtagttgattaggataatttggtaaaat 41137884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 48843550 - 48843715
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||| | ||||||||||  |||||| ||||||| |    
T  48843550 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttctcttcaattatacccttaatttaatactat-atacactacttccaacg 48843648  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttg--gtaaaataacat 307  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||    
T  48843649 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtgtaaaataacat 48843715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 112 - 307
Target Start/End: Complemental strand, 21752296 - 21752102
Alignment:
Q  112 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccct 211  Q
    ||||||||| ||||||||||||||        ||| |||||||| ||||||| ||||||||| ||||||||||||||||||||| |||||| |||||| |    
T  21752296 tttcaaaataagtgtcgttttagtaaaaaaaattggttcaaaataaatgtcattttcagtttccaatgcaataataactttttcgtttcaattgtaccat 21752197  T
Q  212 tcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| | ||| | |||||  || |||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  21752196 tcaattaacattatat-acactattttcaaagtattattttatctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataacat 21752102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 45933737 - 45933584
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||||||||||||||||    |||||||||||| || |||||||||||||||||||||||||||  ||| ||||    
T  45933737 ttgttttaaaatgaatgtcactttcagttttcaatgcaataat----ttttcttttcaattgcacccttcaattaatactatgttacactatttctaaag 45933642  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  45933641 tattatttttt-tttaatgaaaaacaaaccaaaagttgattaagataatttgataaaat 45933584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 1031153 - 1031315
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| |||| ||||||| ||||| ||||||||||||||||  |||||| ||||||||     
T  1031153 ttgtttcaaaatgaatgtcaccttcagtttccattgcaataataacattttattttcaattgtactcttcaattaatactat-atacactacttccaaat 1031251  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| |||||  |||||||||||||||| ||||||||||||  |||||||    
T  1031252 tattattttttctttaataaaaaaagaatcaatagttgattatgataatttggtatgataacat 1031315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 21819282 - 21819443
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||| || | |||||||||||||| ||||||||| || || ||||||| |||| | ||||||||||||||| | ||| | ||||||||     
T  21819282 ttgtttcaaaatgaaagttattttcagttttcaatacaataataaattctt-ttttcaattgtatcattcaattaatactatat-acattacttccaaaa 21819379  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21819380 tattattttttctttaatgaaaaacaaaccaatagtttattaggataatttggtaaaataacat 21819443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 36807933 - 36808090
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||| ||||  |||||||| ||||||||||||||||||||||| ||||| ||||||||||||  |||||||||| ||| |||||    
T  36807933 ttgttttaaaataaatgtcattttcgcttttcaatacaataataactttttcttttcaattgtactcttcaattaatatcatgttacactactttcaaag 36808032  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    | ||||||||||||||||||||||||| ||||||||||||| || ||||||| ||||||    
T  36808033 t-ttattttttctttaatgaaaaacaactcaatagttgattcgggtaatttgataaaat 36808090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 33939887 - 33939724
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||  |||| ||||| |||||||||||||||||| ||| |||||| ||||||||||| |||  ||||||  ||||||||    
T  33939887 ttgttttaaaatgaatgtcacttttggtttccaatgtaataataactttttctttccaattgtaccattcaattaatattat-atacactaattccaaag 33939789  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| ||||||||||||||||||| ||| ||| |||||||||| ||||||||||||||||||||    
T  33939788 tattacttttttctttaatgaaaaataaaccaacagttgattagaataatttggtaaaataacat 33939724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 29636375 - 29636217
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactt-tttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    ||||||| |||||||||||||||||  |||||||||||||||| ||| ||||||| |  | ||||||||||||||||| | ||||| |||| ||||||||    
T  29636375 tcaaaataaatgtcactttcagtttctaatgcaataataacttcttttttttcaattacatccttcaattaatactatat-acactacttctaaagtatt 29636277  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||    
T  29636276 attttttctttaatgaaaaacaaaccaataatttattaggataatttgataaaataacat 29636217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 6563560 - 6563409
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||| ||||||||||||||| |||  |||||||||||||||||||||| |||||||||||||||||| ||| |       ||||||||||||||||    
T  6563560 aaaatgaacgtcactttcagtttttaatttaataataactttttcttttcaattgtacccttcaattaatattatata------cttccaaagtattatt 6563467  T
Q  251 tttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  6563466 tttttctttaatgaaaaacaaaccaatggttgattaggataatttgataaaataacat 6563409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 8293220 - 8293059
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||| ||||||||| | | | ||| |||||||||||||||| ||||||| |||| | || |||||||| ||| | ||||| ||||||||     
T  8293220 ttgttttaaaatgattgtcacttttaatat-caaagcaataataactttttattttcaattgtatcttttaattaatattatat-acactacttccaaat 8293123  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||    
T  8293122 tattattttttctgtaatgaaaaacaaatcaatagttgatcacgataatttggtaaaataacat 8293059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 145 - 248
Target Start/End: Original strand, 10599212 - 10599315
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||| |||||| |||||||||||| ||||||||||    
T  10599212 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacttttctattaatgctatgttacactacttccaaagt 10599311  T
Q  245 atta 248  Q
    ||||    
T  10599312 atta 10599315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 45499980 - 45499819
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||  |||||||||||| ||| || ||||||||||| |||  |  ||| ||| |||||    
T  45499980 ttgtttcaaaatgaatttcactttcagtttccaatgccataataatattttcttttcaaatgtgcctttcaattaatattatact--actactttcaaag 45499883  T
Q  244 tatta----ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    |||||    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  45499882 tattattatttttttctttaatgaaaaacaaaccaatagttaattaggataatttggtaaaata 45499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 30312463 - 30312583
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||||| | |  |||||| ||||||||||||||||    
T  30312463 aaaatgaatgtcactttcggttttcaatacaataataattttttcttttcaattgtacccttcaattaatattgt-atacactacttccaaagtattatt 30312561  T
Q  251 ttttctttaatgaaaaacaaat 272  Q
    ||||||||| | ||||||||||    
T  30312562 ttttctttagtaaaaaacaaat 30312583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 8603973 - 8604086
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||   ||||||||||||||||||||  |||||| |||||||||    
T  8603973 ttgttttaaaatgaacgtcactttcaatttccaatgcaataataactttttcttttcaatgatacccttcaattaatactat-atacactacttccaaag 8604071  T
Q  244 tattattttttcttt 258  Q
    |||||||||||||||    
T  8604072 tattattttttcttt 8604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 716016 - 715908
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||||||||| || | |||| |||||||||    
T  716016 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatactctgct-cactacttccaaag 715918  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  715917 tattactttt 715908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 12977839 - 12977731
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| | ||||||||||| ||  ||||| |||||||||    
T  12977839 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctg-cacactacttccaaag 12977741  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  12977740 tattactttt 12977731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 23155547 - 23155457
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| ||||||||| | |||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23155547 ttcaattaatattatgttacattacttctaaagtattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 23155457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 42285906 - 42286014
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||||  ||||  |||||||||    
T  42285906 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatg-cacacaacttccaaag 42286004  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  42286005 tattactttt 42286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 297
Target Start/End: Original strand, 7759267 - 7759410
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||| |||||||| ||||||||||||||  ||||||||  |||| |||  |||||| | |||||||||||| ||| | ||||| ||| ||||||||||||    
T  7759267 aaaaggaatgtcattttcagttttcaatataataataatatttttttt--aactgtgctcttcaattaatattatat-acactactttcaaagtattatt 7759363  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggt 297  Q
    |||||||||||  ||||||||  ||||||||||||||||||||||||    
T  7759364 ttttctttaatagaaaacaaactaatagttgattaggataatttggt 7759410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 25440884 - 25440978
Alignment:
Q  158 atgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttt 253  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||||||| ||||    
T  25440884 atgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagtattactttt 25440978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 34274792 - 34274871
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| |||||||||||    
T  34274792 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttctttttaattgtaccctccaattaatact 34274871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 2297036 - 2297149
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttct-----tttcaactgtacccttcaattaatactatgttacactgcttc 238  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||     ||||||||||||| | ||||||||||| ||  ||||| ||||    
T  2297036 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataatatctttttcttttaatttcaactgtaccatccaattaatactctg-cacactacttc 2297134  T
Q  239 caaagtattattttt 253  Q
    |||| ||||||||||    
T  2297135 caaaatattattttt 2297149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 148 - 304
Target Start/End: Original strand, 18270579 - 18270725
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc-ttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||| ||||||||| | ||  ||||| ||||||||||||    
T  18270579 ttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcactttcaattgtaccctccaattaatattctg-cacactacttccaaagtat 18270677  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    || ||||          ||||| ||||||||||| || ||||||||||||||||||||    
T  18270678 tactttt----------aaaactaatcaatagttaataaggataatttggtaaaataa 18270725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 18292333 - 18292483
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||| |||| | | ||||||||||| ||  ||||| |||||||||    
T  18292333 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcctttcaattgtatcatccaattaatactctg-cacactacttccaaag 18292431  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  18292432 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 18292483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 304
Target Start/End: Original strand, 31196575 - 31196725
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||| | |||  ||||  ||||||||||||| |||||||| ||| |||||||||||||| ||| | |||||  || ||||||||||||    
T  31196575 aaatgaatgtcactttgaatttctaatgttataataacttttttcttttcaattgtgcccttcaattaatattatat-acactaatttcaaagtattatt 31196673  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||  ||||| ||||||||||||||||  ||||||||| ||||||||    
T  31196674 ttttctttaa--aaaaataaatcaatagttgattgtgataatttgataaaataa 31196725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 249 - 307
Target Start/End: Original strand, 34012559 - 34012617
Alignment:
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34012559 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 34012617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 37502321 - 37502425
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||| ||  ||||| |||||||| ||||    
T  37502321 ttcaaaatgaacgtcactttcagtttccaatgcaataataactttttcttttcaattttaccctccaattaatactctg-cacactacttccaaaatatt 37502419  T
Q  248 attttt 253  Q
    | ||||    
T  37502420 actttt 37502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 44567194 - 44567086
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| | | ||||||||||| ||  ||||| |||||||||    
T  44567194 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataaatttttcttttcaattgtatcatccaattaatactttg-cacactacttccaaag 44567096  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  44567095 tattactttt 44567086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 287
Target Start/End: Original strand, 42753706 - 42753845
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||||  ||| ||||||||||||| |||  ||||||  ||  ||||    
T  42753706 ttgtttcaaaatgaatgtcactttcaatttccaatacaataataacactttcttttcaatcgta-ccttcaattaatattat-atacactatttttaaag 42753803  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattagg 287  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||    
T  42753804 tattattttt--tttaatgaaaaataaaccaatagttgattagg 42753845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 31930006 - 31929905
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||| | | |||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||||||| |    
T  31930006 aaaatgaatattattttcagttttcaatgcaataataattttttcttttcaattgtaccctccaattaatactttg-cacactacttccaaagtattact 31929908  T
Q  251 ttt 253  Q
    |||    
T  31929907 ttt 31929905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 34012159 - 34012240
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||| ||||||||||||||||| ||||| ||||| | |||||||||||| ||||||| ||||||||||||||||||||||    
T  34012159 ttgttttaaaatgaatgtcactttaagtttccaatgtactaataacttttttttttcaattgtacccttcaattaatactat 34012240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 279
Target Start/End: Original strand, 4268609 - 4268744
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc-ttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    ||||||||||||||||||| |||||| ||| ||||| |||||||  |||||  ||||||| |||||| | ||||||||||||| | | | | ||||||||    
T  4268609 ttgtttcaaaatgaatgtcgctttcaatttccaatgtaataatattttttttgttttcaattgtaccttccaattaatactatat-atattacttccaaa 4268707  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagt 279  Q
     ||||||||| | ||||||||||||||||||||||||    
T  4268708 ttattattttctttttaatgaaaaacaaatcaatagt 4268744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 6747225 - 6747327
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||| ||||||||| || |||||||| ||||||||||| ||  ||||| |||||||||    
T  6747225 ttgtttaaaaacgaatgtcactttcagtttccaatgcaataataac-ttttctttttaattgtaccctccaattaatactctg-cacactacttccaaag 6747322  T
Q  244 tatta 248  Q
    |||||    
T  6747323 tatta 6747327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 22296925 - 22296989
Alignment:
Q  15 attttgcacatcaaaatctataattttgtagatttatcggtgttttaacgtatagaaaaagtata 79  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  22296925 attttgcacatcaaaatctataattttgtagatttataagtgttttgacgtatagaaaaagtata 22296989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 307
Target Start/End: Original strand, 25055870 - 25055942
Alignment:
Q  235 cttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||    
T  25055870 cttccaaaatattattttttctttaatgaaaaacaaatcaatagtaaattatgataatgtggtaaaataacat 25055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 247 - 302
Target Start/End: Original strand, 10599464 - 10599519
Alignment:
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10599464 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 10599519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 47461427 - 47461365
Alignment:
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  47461427 attattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaatgacat 47461365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 265
Target Start/End: Complemental strand, 16564885 - 16564799
Alignment:
Q  179 gcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaa 265  Q
    |||||||||||||||| ||||||| | || | ||||||||||| ||||||||| | |||||||| || |||||||||||||||||||    
T  16564885 gcaataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatattttttctttaatgaaa 16564799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 16600777 - 16600863
Alignment:
Q  179 gcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaa 265  Q
    |||||||||||||||| ||||||| | || | ||||||||||| ||||||||| | |||||||| || |||||||||||||||||||    
T  16600777 gcaataataactttttattttcaattatagcattcaattaatattatgttacattacttccaaaataatattttttctttaatgaaa 16600863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 7335372 - 7335441
Alignment:
Q  239 caaagtattattttttctttaatg-aaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||  ||||||||| ||| ||||||||| |||||||||||||||||||||    
T  7335372 caaagtattattttttctttaatttaaaaacaaaccaacagttgattatgataatttggtaaaataacat 7335441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 33682527 - 33682627
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||| ||  ||||||||||  ||||||||||||||||| |||| |||||||| | |||||||||||||||||| |  |||||| |||||||||    
T  33682527 ttgtttcaaaaagaccgtcactttcaagtttcaatgcaataataatttttccttttcaattttacccttcaattaatact-ttatacactacttccaaag 33682625  T
Q  244 ta 245  Q
    ||    
T  33682626 ta 33682627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 24780459 - 24780309
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||||| ||             ||||||||| |||||  ||||||  || |||||    
T  24780459 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttatt-------------ttcaattaagactat-atacactaatttcaaag 24780374  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||  |||||||||||| ||||| ||| ||||||| |||||||||||||| ||||||||||||    
T  24780373 tattacgtttttctttaattaaaaataaaccaatagtagattaggataatttagtaaaataacat 24780309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 40927163 - 40927211
Alignment:
Q  146 gtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt 194  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40927163 gtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttt 40927211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 47187749 - 47187811
Alignment:
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    |||||||||||||||||| ||||||| ||||||| || || ||||||||||||||||||||||    
T  47187749 tattattttttctttaataaaaaacatatcaataattaataaggataatttggtaaaataaca 47187811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 19303450 - 19303385
Alignment:
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| ||||||||||||||||| ||| |||| |||||||| |||||||| ||||||||||||    
T  19303450 agtattatattttctttaatgaaaaataaaccaatggttgattatgataatttagtaaaataacat 19303385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 7899927 - 7900087
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||| | ||| |||||||||||||||| ||||  ||   ||| ||  | |  ||||||||||||| |||  ||||| ||| |||||    
T  7899927 ttgttttaaaatgaatgtaattttgagttttcaatgcaatattaaccattaacttttaatcgcaatcttcaattaatacaatga-acactactttcaaag 7900025  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||  |||| || |||||||| ||||||||  | |||||||||||||||||||||    
T  7900026 tattacttttgttttagtggaaaacaaaccaatagttattgaggataatttggtaaaataac 7900087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 144 - 191
Target Start/End: Complemental strand, 32501902 - 32501855
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt 191  Q
    |||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  32501902 ttgttttaaaataaatatcactttcagttttcaatgcaataataactt 32501855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 39557327 - 39557378
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||||| |||||    
T  39557327 aaaataaatgtcactttcagttttcaatgtaataataattttttctcttcaa 39557378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 302
Target Start/End: Complemental strand, 7795278 - 7795238
Alignment:
Q  262 gaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  7795278 gaaaaacaaaccaataggtgattaggataatttggtaaaat 7795238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 202
Target Start/End: Complemental strand, 8334425 - 8334367
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||| |||| || |||||    
T  8334425 ttgtttcaaaatcaatgtcactttcattttccaatccaataataaattttcctattcaa 8334367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 31883823 - 31883890
Alignment:
Q  185 ataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttt 253  Q
    |||||||||||||||||| |||||  | ||||||||||| ||  ||||| |||||||||||||| ||||    
T  31883823 ataactttttcttttcaattgtacattccaattaatactctg-cacactacttccaaagtattactttt 31883890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 233997 - 234190
Alignment:
Q  110 tgtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtac 208  Q
    ||||||||||||||||||||||||| |        |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||    
T  233997 tgtttcaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtac 234096  T
Q  209 ccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  234097 ccttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 234190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 23259480 - 23259322
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||| ||||||||| |||||||| ||||||||||| |||||||||    
T  23259480 ttgtttcaaaatgaatgtcattttcagtttccaatgcaaaaataacttttacttttcaattgtacccttaaattaatattatgttacactacttccaaag 23259381  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  23259380 tattattttttctttagtgaaaagcaaatcaatagttgattaggataatttggtaaaat 23259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 9940646 - 9940808
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||| |||   ||||| ||||||||     
T  9940646 ttgttttaaaatgattgtcactttcagttttcaatgcaataataacttttctttttcaattgtacccttcaattaatattatac-acactacttccaaaa 9940744  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9940745 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 9940808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 148 - 302
Target Start/End: Original strand, 19674982 - 19675134
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||| ||||  ||    
T  19674982 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccattcaattaatactatgttgcactacttctaaag--tt 19675079  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19675080 tttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 19675134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 24163869 - 24163711
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||| |||||||||    
T  24163869 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacatttcaattaatactatgttacactacttccaaag 24163770  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| ||||||||||||||||||||  ||||||||||| |||||||||| ||||||    
T  24163769 tattattatttctttaatgaaaaacaaactaatagttgatttggataatttgataaaat 24163711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 148 - 302
Target Start/End: Complemental strand, 29713557 - 29713403
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  29713557 ttcaaaatgaatgtcattttccgtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaagtatt 29713458  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||  |||||||    
T  29713457 attttttctttaataaaaaacaaactaatagttgattaggataattatgtaaaat 29713403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 31443601 - 31443442
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctttt-caactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||| | ||||||||| |||||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||   ||||||||    
T  31443601 ttgtttaaaaatgaatgttattttcagtttccaatgcaataataactttttttttttcaattgtacctttcaattaatactatgttacataacttccaaa 31443502  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31443501 gtattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 31443442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 13504002 - 13503836
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttct--tttcaactgtacccttcaattaatactatgt-tacactgcttccaa 241  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |  |||||| |||||||||||||||||||||| | |||||| ||| |||    
T  13504002 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttttttttatttcaattgtacccttcaattaatactatatatacactactttcaa 13503903  T
Q  242 agtatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||  ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  13503902 agtattattttttttctttaatgaaaaacaaa-caatagtttattaggataatttggtaaaataacat 13503836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 148 - 304
Target Start/End: Complemental strand, 12459469 - 12459314
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    ||||||||||||||||||||| ||||  ||| |||||||| |||||||||||||| | |||||||||||||||||||| | ||| | |||||||||||||    
T  12459469 ttcaaaatgaatgtcactttcggtttctaatacaataatatctttttcttttcaattatacccttcaattaatactatat-acattacttccaaagtatt 12459371  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
     ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  12459370 gttttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaataa 12459314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 180 - 302
Target Start/End: Original strand, 1134959 - 1135081
Alignment:
Q  180 caataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagt 279  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||| ||||||||||  ||||||    
T  1134959 caataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaatattattttttctttaaagaaaaacaaacaaatagt 1135058  T
Q  280 tgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||    
T  1135059 tgattaggataatttggtaaaat 1135081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 577059 - 577222
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| | | |||||||||||||||||||||||||||||||| || |||||| | |||||||||||||||| ||| | ||||| ||||||||     
T  577059 ttgttttaaaataactatcactttcagttttcaatgcaataataactttatcatttcaattatacccttcaattaatattatat-acactacttccaaat 577157  T
Q  244 tattatttt-ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  577158 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaataacat 577222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 3988896 - 3988736
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| |||  |||||||||||| |||||||||||||| ||||||||||||| | |||||||||||||||||||| | | |||  ||| ||||    
T  3988896 ttgtttcaaaataaat--cactttcagtttccaatgcaataataattttttcttttcaattatacccttcaattaatactatat-atactatttcaaaag 3988800  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  3988799 tattattttttctttaatgaaaaacaaacaaatagttgattatgataatttggtaaaataacat 3988736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 24556076 - 24555924
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagta-ttat 249  Q
    ||||| ||||||| ||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||| |  || ||||||| || |    
T  24556076 aaaataaatgtcattttcagttttcaatgtaataataattttttcttttcaattgtactcttcaattaatactatgttacattattttcaaagtattttt 24555977  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  24555976 tttttttttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 24555924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 12323035 - 12322876
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||  |||||| || ||||||||||||||||||| | ||||| |||||||||||||    
T  12323035 ttcaaaatgaatgtcactttcagtttccaatgcaataata--ttttttatttcaattgcacccttcaattaatactatat-acactacttccaaagtatt 12322939  T
Q  248 attttttctttaatgaaaaacaaa---tcaatagttgattaggataatttggtaaaataacat 307  Q
     | ||||||||||||||||| |||   ||||||||| ||||||||||||||||||||||||||    
T  12322938 gtgttttctttaatgaaaaaaaaaaaatcaatagttaattaggataatttggtaaaataacat 12322876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 280
Target Start/End: Original strand, 32193700 - 32193835
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||||||| |||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  32193700 ttgttttaaaataaatgtcacttttagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatactat-atacactacttccaaag 32193798  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagtt 280  Q
    |||||| |||||||||||| |||||||| ||||||||    
T  32193799 tattatcttttctttaatgtaaaacaaaccaatagtt 32193835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 17552400 - 17552239
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||  ||||| ||||||| ||||   || |||||||||||| | ||||| ||||||||     
T  17552400 ttgtttcgaaatgaatgtcattttcagtttccaatgcaataata--ttttttttttcaattgtaatttttaattaatactatat-acactacttccaaaa 17552304  T
Q  244 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  17552303 tattatttttttctttaatgaaaaacaaaccaattgttgattaggataatttggtaaaattacat 17552239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 300
Target Start/End: Complemental strand, 18737245 - 18737087
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||| |||||||| |||  |||||| |||  ||||    
T  18737245 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactctttcttttcaattataccctttaattaatattat-atacactacttttaaag 18737147  T
Q  244 ---tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaa 300  Q
       |||||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||    
T  18737146 tactattattttttctttaatgaaaaataaaacaatagttaattaggataatttgataaa 18737087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 12063665 - 12063558
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| |||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||| ||||||||||||||| |||| ||||    
T  12063665 ttgtttccaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtacccttcaattgatactatgttacactacttctaaag 12063566  T
Q  244 tattattt 251  Q
    ||||||||    
T  12063565 tattattt 12063558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 10540571 - 10540481
Alignment:
Q  204 tgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataattt 294  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10540571 tgtatccttcaattaatactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattatgataattt 10540481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 20226292 - 20226213
Alignment:
Q  228 tacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20226292 tacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaataacat 20226213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 22120276 - 22120197
Alignment:
Q  228 tacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22120276 tacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattagtataatttggtaaaataacat 22120197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 29399944 - 29400023
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  29399944 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaattaatact 29400023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 4850650 - 4850500
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||| | ||||||||||| ||  ||||| ||||||||     
T  4850650 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtaccatccaattaatactctg-cacactacttccaaaa 4850552  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  4850551 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 4850500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 13011494 - 13011340
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactt--tttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta 248  Q
    ||||| |||||||| ||||||||||||| |||||||||  |  ||| |||| || | |||| ||||||||||||||| | ||||| ||| |||||||||     
T  13011494 aaaataaatgtcacgttcagttttcaatacaataataatatattttttttttaattttaccgttcaattaatactatat-acactactttcaaagtatt- 13011397  T
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
      ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||    
T  13011396 --ttttctttaatgaaaaacaaaccgatagttgattaagataatttggtaaaataacat 13011340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 307
Target Start/End: Complemental strand, 1502840 - 1502745
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||| | ||||| |||||||| ||||||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||    
T  1502840 ttcaattaatactatat-acactacttccaaaatattattttttatttaatgaaaaacaaaccaatagttaattaagataatttggtaaaataacat 1502745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 17828348 - 17828443
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||| | ||||| ||| |||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  17828348 ttcaattaatactatat-acacttctttcaaagtattactttttctttaatgaaaaacaaaccaatggttgattaagataatttggtaaaataacat 17828443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 8030643 - 8030714
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaatta 218  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  8030643 tttcaaaatgaatgttactttcagttttcaatgtaataataattttttcttttcaactgtacccttcaatta 8030714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 303
Target Start/End: Complemental strand, 31233780 - 31233618
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaa-- 241  Q
    |||||| |||||||||||||||||||||||||| |||||||||||  |||||||||||| |||||||||||||| ||||||    | ||| |||||||      
T  31233780 ttgttttaaaatgaatgtcactttcagttttcattgcaataataatattttcttttcaattgtacccttcaattgatacta-aacaaactacttccaaaa 31233682  T
Q  242 -agtattattttttctttaatg-aaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
     | ||||||||||||||||||| ||||| ||| | ||||||||||  ||||| |||||| ||||    
T  31233681 tattattattttttctttaatgaaaaaaaaaaccgatagttgattcagataacttggtagaata 31233618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 105 - 221
Target Start/End: Complemental strand, 10520833 - 10520717
Alignment:
Q  105 ccatttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaact 204  Q
    |||| ||||| |||||||||||| |||||| |       |||||| ||||| ||||||||||||| |||||||| ||||||||| ||||||||||||| |    
T  10520833 ccatctgttttaaaatgagtgtcattttagctaaaaaaattgttttaaaataaatgtcactttcaattttcaatacaataataattttttcttttcaatt 10520734  T
Q  205 gtacccttcaattaata 221  Q
    |||||||||||||||||    
T  10520733 gtacccttcaattaata 10520717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 304
Target Start/End: Original strand, 12588531 - 12588682
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgt---tacactgcttccaaagtatt 247  Q
    ||||||||||| ||||||||||| |||||||||||||||||||  ||||| | | |||||||||||||||| ||| |   || | | |||| ||| ||||    
T  12588531 aaaatgaatgttactttcagtttgcaatgcaataataactttt--ttttctattatacccttcaattaataatatatatatatattacttcaaaactatt 12588628  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||   |||||| ||||| ||||||||||||| ||| ||||||||||||||||||    
T  12588629 atttt---tttaataaaaaataaatcaatagttggttaagataatttggtaaaataa 12588682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 16128094 - 16128006
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaa 300  Q
    ||||||||||||||| | ||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||| ||| ||||    
T  16128094 ttcaattaatactatat-acactacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattaggataaattgataaa 16128006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 173 - 297
Target Start/End: Complemental strand, 17267733 - 17267609
Alignment:
Q  173 ttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta-ttttttctttaatgaaaaacaaa 271  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||| |||  ||||||  ||  ||||||||| |||||||||| || |||||||||    
T  17267733 ttcaatgcaataataattttttcttttcaactgtaccctttaattaatattat-atacactatttttaaagtattatttttttctttgataaaaaacaaa 17267635  T
Q  272 tcaatagttgattaggataatttggt 297  Q
      |||| |||||||| ||||||||||    
T  17267634 ctaatatttgattagaataatttggt 17267609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 21271466 - 21271395
Alignment:
Q  235 cttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  21271466 cttccaaattattattttt-ctttaatgaagaacaaatcaatagttgattaggatactttggtaaaataacat 21271395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 34513739 - 34513655
Alignment:
Q  163 actttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||  |||||||| || |||||||| ||||    
T  34513739 actttcagtttccaatgcaataataactttttcttttcaattgtatccttcaattaatgttatgttaccctacttccaaaatatt 34513655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 8957865 - 8957928
Alignment:
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  8957865 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaagataacat 8957928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 8961492 - 8961429
Alignment:
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||    
T  8961492 tattattttttctttaataaaaaacaaaccaatagttgattaggataatttggtaagataacat 8961429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 32619884 - 32619817
Alignment:
Q  240 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||| |||||||    
T  32619884 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaagataatttaataatataacat 32619817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 220 - 302
Target Start/End: Complemental strand, 10520469 - 10520387
Alignment:
Q  220 tactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||| |||  ||||||||||||||| |||||||| ||||||  ||||| ||||||| ||||||||||||||||    
T  10520469 tactatgttacactacttttaaagtattattttttatttaatgagaaacaatccaatatttgattaagataatttggtaaaat 10520387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 17246727 - 17246678
Alignment:
Q  208 cccttcaattaatactatgttacactgcttccaaagtattattttttctt 257  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17246727 cccttcaattaatactatgttacactacttccaaagtattattttttctt 17246678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 32429282 - 32429359
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||| |||| | | |||||||||    
T  32429282 ttgtttcaaaacgaatgtcacttttaatttccaatgcaataataactttttcttttcaattgtatcatccaattaata 32429359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 3847744 - 3847812
Alignment:
Q  239 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||||  ||||||||||||    
T  3847744 caaaggattattttttctttaattaaaaataaatcaatagttgattaagataattctgtaaaataacat 3847812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 19689359 - 19689407
Alignment:
Q  175 caatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19689359 caatgcaataataactttttcttttcaactgtactcttcaattaatact 19689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 19600419 - 19600541
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||  ||||||| ||||||| |||||||||||| ||||||| ||||  |||| | || |||||||  || | ||| || ||||||||     
T  19600419 ttgtttcaaaatgaagatcactttaagttttctatgcaataataattttttctcttcatttgtatcttttaattaatgtta-gatacgctacttccaaaa 19600517  T
Q  244 tattattttttctttaatgaaaaa 267  Q
    |||||||||||||||||| |||||    
T  19600518 tattattttttctttaataaaaaa 19600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 10540663 - 10540590
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaatta 218  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||| ||||  |||||| |||||||||||||||    
T  10540663 ttgtttcaaaataaatgtcactttcaatttccaatgcaataataacctttt-gtttcaattgtacccttcaatta 10540590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 32193927 - 32193970
Alignment:
Q  264 aaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  32193927 aaaacaaaccaatagttgattaggataatttggtaaaataacat 32193970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 21272257 - 21272180
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||| ||||||||| ||||||||||||| ||||| ||||||||| ||||||||| ||  ||||  |||||||||||    
T  21272257 ttgttttaaaatgaatatcactttcagtttccaatgtaataataacattttctttttaatcgtacatttcaattaata 21272180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 20226627 - 20226557
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||| ||||| ||| || | |||||||||||||    
T  20226627 aaataaatgtcattttcagtttttaatgcaataataa-ttttttttttctactctatctttcaattaatact 20226557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 22120611 - 22120541
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||| ||||||| |||||||||| ||||||||||||| ||||| ||||| ||| || | |||||||||||||    
T  22120611 aaataaatgtcattttcagtttttaatgcaataataa-ttttttttttctactctatctttcaattaatact 22120541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 1502893 - 1502836
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    ||||| ||||| ||||||| ||||||||| |||||||||| ||| | |||||||||||    
T  1502893 tgttttaaaattaatgtcattttcagtttccaatgcaatagtaattatttcttttcaa 1502836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 2e-73; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 19878612 - 19878804
Alignment:
Q  110 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    |||||||||||||||||||||||||         |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  19878612 tgtttcaaaatgagtgtcgttttagcaaaaaaaattgtttgaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc 19878711  T
Q  210 cttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19878712 cttcaatttatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 19878804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 52957949 - 52957791
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  52957949 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52957850  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  52957849 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 52957791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 1819528 - 1819718
Alignment:
Q  112 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccct 211  Q
    |||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  1819528 tttcaaaatgagtgtcgttttagcaaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataaatttttcttttcaattgtaccct 1819627  T
Q  212 tcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1819628 tcaattaatactatgttacactactttcaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaat 1819718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 20448037 - 20448195
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||    
T  20448037 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattatacccttcaattaatactatgttacactacttccaaag 20448136  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  20448137 tattattttttctttaatgaaaatcaaaccaatagttgattaggataatttggtaaaat 20448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 45043747 - 45043589
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  45043747 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 45043648  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45043647 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 45043589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 40345506 - 40345348
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  40345506 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 40345407  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  40345406 tattgtattttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaat 40345348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 49080635 - 49080478
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||| |||    
T  49080635 ttgtttcaaaatgaatgtcactttcagtttt-aatgcaataataactttttattttcaattgtacccttcaattaatattatgttacactacttccgaag 49080537  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49080536 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 49080478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 148 - 302
Target Start/End: Complemental strand, 2728553 - 2728399
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||    
T  2728553 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaacagtacccttcagttaatactatgttatactacttccaaagtatt 2728454  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  2728453 attttttctttaatgaaaaacacaccaatagttgattaggataatttggtaaaat 2728399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 112 - 302
Target Start/End: Original strand, 37654376 - 37654566
Alignment:
Q  112 tttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccct 211  Q
    ||||||||||||||||||||||||        |||||| ||||||||||||| || |||||| |||| ||||||||||||||||||||||| ||||||||    
T  37654376 tttcaaaatgagtgtcgttttagtcaaaataattgttttaaaatgaatgtcaatt-cagtttccaatacaataataactttttcttttcaattgtaccct 37654474  T
Q  212 tcaattaatactatgttacactgcttccaaagtattattttttctttaatg-aaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  37654475 tcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaaacaaaccaatagttgattaggataatttggtaaaat 37654566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 52848213 - 52848055
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  52848213 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaag 52848114  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  52848113 tattattttttctttaatgaaaaacaagccaatagttgattaggataatttggtaaaat 52848055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 10573313 - 10573151
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||| | |||||||||    
T  10573313 ttgtttcaaaatgaatgtcatttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacaatacttccaaag 10573215  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10573214 tattattttttcattaatgaaaatcaaatcaatagttgattaggataatttggtaaaataacat 10573151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 44572024 - 44571866
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  44572024 ttgttttaaaatgaatgtcgctttcagtttccaatgcaataaaaactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 44571925  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  44571924 tattattttttctttaatgaaaaataaaccaatagttgattaagataatttggtaaaat 44571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 49089462 - 49089619
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||| | ||||||||||||| |||||||||||||| |||||||||    
T  49089462 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataacttttt-tttccaattatacccttcaattagtactatgttacactacttccaaag 49089560  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  49089561 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 49089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 53814656 - 53814498
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||| |||||||||||||||||| ||||  |||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||| |||||    
T  53814656 ttgttccaaaatgaatgtcacttttagttaacaatgcaataataactttttatttttaattgtacccttcaattaatactatgttacactactttcaaag 53814557  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53814556 tattattttttctttaatgaaaaacaaatcaataattgattaggataatttggtaaaat 53814498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 19930712 - 19930870
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||     
T  19930712 ttgtttcaaaatgaatgtcactttcaatttccgatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactacttccaaaa 19930811  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  19930812 tattatttttcctttaatgaaaaacaaaccaatagttgattaagataatttgataaaat 19930870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 47817736 - 47817899
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  47817736 ttgtttcaaaatgaatttaactttcagtttgcaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaag 47817834  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  47817835 tattatttttttctttaatgaaaaacaaaccaatagttgattatgataaattggtaaaataacat 47817899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 24940877 - 24941036
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||  |||     
T  24940877 ttgtttcaaaatgaatgtcattttcgatttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttaaaaa 24940976  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24940977 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 24941036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 30261257 - 30261419
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||  |||| | ||| |||||    
T  30261257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatgttttcttttcaattgtacccttcaattaatactat-atacattactttcaaag 30261355  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  30261356 tattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaataacat 30261419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 52253843 - 52254004
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctttt---caactgtacccttcaattaatactatgttacactgcttcca 240  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||   ||| |||||||||||||||||| |||||| |||| ||||||    
T  52253843 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataacttcttctttttttcaattgtacccttcaattaatattatgttccactacttcca 52253942  T
Q  241 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    | ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  52253943 aggtattattttttctttaatgaaaaacagaccaatagttgattaggataatttggtaaaat 52254004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 2493100 - 2493258
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||||||| |    
T  2493100 ttgtttcaaaatgaaagtcactttcattttccaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacattacttccaagg 2493199  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  2493200 tattatcttttctttaatgaaaaacaacccaatagttgattaggataatctggtaaaat 2493258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 19451370 - 19451201
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgt------tacactgctt 237  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| || |      |||||| |||    
T  19451370 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataccatatagtatatacactactt 19451271  T
Q  238 ccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  19451270 ccaaagtattattttttctttaatgaaaaacaaaccaataattgattaggctattttggtaaaataacat 19451201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 41920468 - 41920310
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||| ||||||||| ||| |||||||||||||||||||||||| | |||||||||||||||| |||||| |||| |||||||||    
T  41920468 ttgttttaaaataaatgtcattttcagtttccaaagcaataataactttttcttttcaattatacccttcaattaatattatgttccactacttccaaag 41920369  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  41920368 tattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 41920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 34316227 - 34316378
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||| || |||| ||||||||| ||||||    
T  34316227 aaaataaatgtcactttcagtttccaatgcaataataattttttattttcaattgtacccttcaattaatattatattgcactacttccaaaggattatt 34316326  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34316327 ctttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 34316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 29519684 - 29519526
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||| |||| ||||    
T  29519684 ttgtttcaaaataaatgtcacttttagtttccaatgcaataataactttttattttcaattgtatccttcaattaatactatgttacactacttctaaag 29519585  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||| || |||||||| |||||  ||||||||||||||    
T  29519584 tattattttttctttaatgaaaaacgaaccaatagtttattagagtaatttggtaaaat 29519526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 54042342 - 54042184
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||| |||| ||||| |||||||| ||||||||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  54042342 ttgttttaaaatgaatgtcactttcggtttccaatgtaataataattttttcttttcaattgtacctttcaattaataccatgttacactacttccaaag 54042243  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| |||||||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  54042242 tattattatttctttaatgaaaaacaaaccaatagttgattatgataatttgataaaat 54042184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 50203074 - 50203234
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||| | |||| ||||    
T  50203074 ttgttttaaaatgaatgtcactttcagtc--caatgcaataataactttttcttttcaattgtacccttcaattaatattatat-acattacttcaaaag 50203170  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  50203171 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtgaaataacat 50203234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 27653674 - 27653830
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||| ||| |||||  |||||||| ||||||||||  |||||| |||||||||||||||||||||||||||||| ||||||||     
T  27653674 ttgttttaaaataaatgtcatttttagtttctaatgcaatgataacttttt--tttcaattgtacccttcaattaatactatgttacactacttccaaaa 27653771  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27653772 tattattttttctttaatgaaaaacaactcaatagttgattaggataatttggtaaaat 27653830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 29370608 - 29370759
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccctt-caattaatactatgttacactgcttccaaagtattat 249  Q
    ||||| ||||||||||||||||||||||  |||||||||||||||||||||| |||| |||| ||||||||||||  ||||||| |||||||||||||||    
T  29370608 aaaataaatgtcactttcagttttcaatataataataactttttcttttcaattgtatcctttcaattaatactaaattacactacttccaaagtattat 29370707  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29370708 ttt-tctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29370759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 50623081 - 50623240
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||| |||| | ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||| |||| ||||    
T  50623081 ttgttttaaaatgtatgttatttttagttttcaatgcaataataactttttcttttcaattatacccttcaattaatataatgttacactacttctaaag 50623180  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  50623181 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 50623240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 101 - 307
Target Start/End: Original strand, 41496159 - 41496365
Alignment:
Q  101 tattccatttgtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctttt 199  Q
    |||| |||||||||||||||||||||| |||||| |        |||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||    
T  41496159 tatttcatttgtttcaaaatgagtgtcattttagctaacaaaaattgtttcaaaataaatctcactttcagttttcaatacaataataactttttctttt 41496258  T
Q  200 caactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaa 299  Q
    ||| ||||| |||||||||||| |||  |||||| || ||||| |||||||| ||||| ||| |||||||||  |||||||||||||||||||||||| |    
T  41496259 caattgtactcttcaattaatattat-atacactactcccaaaatattatttattcttcaataaaaaacaaacaaatagttgattaggataatttggtga 41496357  T
Q  300 aataacat 307  Q
    ||||||||    
T  41496358 aataacat 41496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 8971040 - 8971200
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||  |||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||||| |||  |||||| |||||||||    
T  8971040 ttgttttaaaatgaccgtcactttcagttttcaatgaaataataattttttcttttcaattgtactcttcaattaataatat-atacactacttccaaag 8971138  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||    
T  8971139 tattatttttttctttaatgaaaaacaaaccaatagtttattaagataatttggtaaaataa 8971200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 152 - 304
Target Start/End: Original strand, 45839643 - 45839795
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||| |||||| ||||||||||| ||| | ||| | |||||||||||||||||    
T  45839643 aaatgaatgtcactttcagtttctaatacaataataactttttattttcaattgtaccattcaattaatattatat-acattacttccaaagtattattt 45839741  T
Q  252 t-ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45839742 ttttctttaatgaaaaacaaatcaattgttgattaggataatttggtaaaataa 45839795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 40011033 - 40010873
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt-tttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||| ||||||||||| ||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||||||  |||    
T  40011033 ttgttttaaaatgaatgttactttcagtttccaatgcaataacaacttcttttttttcaattgtacccttcaattaatactatgttacactgctttaaaa 40010934  T
Q  243 gtattatt-ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||||| |||||||||||  ||||||||||||||||| ||||||||||||| |||||||    
T  40010933 atattatttttttctttaatataaaacaaatcaatagttaattaggataattttgtaaaat 40010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 18429995 - 18430145
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||| |||||| |||  || | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  18429995 aaaatgaatgttactttcggttcccatt-caataataactttttcttttcaattgtacccttcaattaatactatgttacactactttctaagtattatt 18430093  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  18430094 ttttctttaaagaaaaacaaacgaatagttgattatgataatttggtaaaat 18430145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 56373729 - 56373576
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat--gttacactgcttccaaagtatta 248  Q
    ||||||||| | |||||||||||  |||  |||||||| ||||||||||||| |||||||||||||||||| |||  |||||||| ||||||||||||||    
T  56373729 aaaatgaatattactttcagtttctaatataataataattttttcttttcaattgtacccttcaattaatattatatgttacactacttccaaagtatta 56373630  T
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  56373629 ttttttctttaatgaaaaacaaaataattgttgattaggataatttggtaaaat 56373576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 157 - 302
Target Start/End: Original strand, 42605584 - 42605728
Alignment:
Q  157 aatgtcactttcagttttcaa-tgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttc 255  Q
    ||||||| |||||||||| || |||||||||   ||||||||||||| |||||||||||||||||| ||||||||| | ||| |||||||||||||||||    
T  42605584 aatgtcattttcagtttttaaatgcaataatt--tttttcttttcaattgtacccttcaattaatattatgttacattactttcaaagtattattttttc 42605681  T
Q  256 tttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  42605682 tttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 42605728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 111 - 307
Target Start/End: Complemental strand, 46392253 - 46392059
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| ||||||||||||||||||| |       || ||| ||||||  ||||||||||| ||||||| |||||||||| ||||||||||||| | ||||     
T  46392253 gttttaaaatgagtgtcgttttagctaaaaaaattattttaaaatggctgtcactttcacttttcaaagcaataataattttttcttttcaattatacct 46392154  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||| ||||    
T  46392153 ttcaattaata-tat-ttacactacttccaaagtattattttttatttaatagaaaacaaaccaatagttgattaggataatttggtaaaattacat 46392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 28734596 - 28734754
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||| ||||||||||||||||||||| || |||||||||||         ||||| |||||||||||||||||||||||||||||| ||| |||||    
T  28734596 ttgtttcataatgaatgtcactttcagtttccattgcaataataaaaaaaaaaattcaattgtacccttcaattaatactatgttacactacttgcaaag 28734695  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  28734696 tattattttttctttaatgaaaaacaaaccaataattgattaggataatttgataaaat 28734754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 6991413 - 6991262
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||| ||| | |||||  || ||||||||||||    
T  6991413 aaaatgaatgtcactttcagttttcaatacaataataattttttcttttcaa-tgtacccttcagttaatattatat-acactattttcaaagtattatt 6991316  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||||||||| |||||    
T  6991315 ttttctttaataaaaaataaaccaatagttgactaggataatttggtataataa 6991262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 40837128 - 40837287
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc-ttcaattaatactatgttacactgcttccaaa 242  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||  ||||||  |||||||||||||||||||||| ||||||||    
T  40837128 ttgtttcaaaatgaatgtcactttcattttccaatgcaataataacttttt-ttttcaatcgtacccgatcaattaatactatgttacactacttccaaa 40837226  T
Q  243 --gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaa 301  Q
       |||| ||||||||||||||||||||||||||||   |||||| |||||||||||||||    
T  40837227 ttttatttttttttctttaatgaaaaacaaatcaatgagtgattaagataatttggtaaaa 40837287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 52162111 - 52162264
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||  ||| || | |||||||||||||||||||  | |||||  |||||||||||||||    
T  52162111 aaaatgaatgtcactttcaattttcaacgcaataataatttttt--tttgaattatacccttcaattaatactaaat-acactagttccaaagtattatt 52162207  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  52162208 ttttctttaatgaaaaacaaaccaatatttgattaagataatttggtaaaataacat 52162264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 38991923 - 38991764
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttca---gttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttcca 240  Q
    |||||| |||| |||||||| |||||   |||| ||||||||||||||||||||||||| || ||||  |||||||||||| ||||||||||| ||| ||    
T  38991923 ttgttttaaaacgaatgtcaatttcatcggtttccaatgcaataataactttttcttttgaattgtattcttcaattaatattatgttacactactttca 38991824  T
Q  241 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||||    
T  38991823 aagtattattttttcttgaatgaaaaacaaaccaat--ttgattaggataatttggtaaaat 38991764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 11364224 - 11364386
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| || |||||||  |||||| ||||| |||| |||||||||||||||||||||| |||||||||||||||||| ||| | | ||| |||||||||    
T  11364224 ttgttttaagatgaatgatactttcggtttttaatgaaataataactttttcttttcaattgtacccttcaattaatattatat-atactacttccaaag 11364322  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||| |||| ||||||||||||| ||||| || |||| |||||||||||||||||||||    
T  11364323 tattattttctcttcaatgaaaaacaaaccaataattaattaagataatttggtaaaataacat 11364386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 34413706 - 34413543
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||||| |||  ||||||||||||||||||| ||||||| |||||| ||||||||||| |||  |||||| |||| |||     
T  34413706 ttgtttcaaaataaatgtcactttcaatttcaaatgcaataataactttttattttcaattgtaccattcaattaatattat-atacactacttctaaaa 34413608  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| |||||||||||||||||||  || |||||||||||||| ||||||| ||||||||||||    
T  34413607 tattatttttttctttaatgaaaaaagaaccaatagttgattagcataatttagtaaaataacat 34413543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 306
Target Start/End: Complemental strand, 44868397 - 44868249
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||| ||||||||      |||||||||||||||||| |||||| ||||||||||| ||| | ||| | |||||||| |||||||    
T  44868397 aaaatgaatgtcactttcaattttcaat------ataactttttcttttcaattgtaccattcaattaataatatat-acattacttccaaaatattatt 44868305  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    || ||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  44868304 ttatctttaatggaaaacaaatcaatagttgattaggacaatttggtaaaataaca 44868249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 620330 - 620172
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    ||||||||| ||| ||| |||||  ||||||||||||| ||||| |||||||| |||||||||||||||||||| | | ||| | |||||||||||||||    
T  620330 aaaatgaatatcagtttaagtttctaatgcaataataatttttttcttttcaattgtacccttcaattaatactctat-acattacttccaaagtattat 620232  T
Q  250 tttttc--tttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||   ||||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  620231 ttttttcttttaaagaaaaacaaatcaatagttgattaaaataatttggtaaaataacat 620172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 304
Target Start/End: Original strand, 56460082 - 56460243
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaat--taatactatgttacactgcttccaaa 242  Q
    ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| || | || ||||||||  ||||| |||  |||||| ||||||||    
T  56460082 tgttttaaaatgaatgtcactttcagctttcaatgcaatagtaactttttctttttaattatatccttcaattataatattat-atacactacttccaaa 56460180  T
Q  243 gtattattttttc-tttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
     |||||||||||| ||||||||||||||||   |||| ||||||| ||||||| |||||||||    
T  56460181 atattattttttcttttaatgaaaaacaaacttatagctgattagaataatttagtaaaataa 56460243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 147 - 253
Target Start/End: Complemental strand, 7906152 - 7906047
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||||||||||||||||    
T  7906152 tttcaaaatgaatgtcactttcagtttccggtgcaataataactttttcttttcaattgtaccctccaattaatactctg-gacactgcttccaaagtat 7906054  T
Q  247 tattttt 253  Q
    || ||||    
T  7906053 tactttt 7906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 22220518 - 22220410
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||||| ||||||||     
T  22220518 ttgtttcaaaataaatgtcattttcaattttcaatgcaataataactttttcttttcaattgtaccctccaattaatactatg-cacactacttccaaaa 22220420  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  22220419 tattactttt 22220410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 25123872 - 25123760
Alignment:
Q  157 aatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttct 256  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||  |||||  |||||||| |||||||||||||    
T  25123872 aatgtcattttcagttttcaatacaataataattttttcttttcagttgtacccttcaattaatactat-atacacgacttccaaaatattattttttct 25123774  T
Q  257 ttaatgaaaaacaa 270  Q
    |||| |||||||||    
T  25123773 ttaaagaaaaacaa 25123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 37624554 - 37624662
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| ||  ||||| |||| ||||    
T  37624554 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttcaaaag 37624652  T
Q  244 tattattttt 253  Q
    ||||||||||    
T  37624653 tattattttt 37624662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 47458544 - 47458383
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||| ||| | ||||| |||||||||||||  ||||| |||||||| |||||| ||||||||||||||| | ||| | |||  |||    
T  47458544 ttgttttaaaatgaatgtaactcttagttt-caatgcaataatattttttttcttttcaattgtaccattcaattaatactatat-acattacttttaaa 47458447  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| |||||| ||||||||||   |||||||||||||||||||||||||||||||||    
T  47458446 gtattattttt-ctttaacgaaaaacaaacatatagttgattaggataatttggtaaaataacat 47458383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 4505335 - 4505484
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||| ||  ||||| ||| |||||    
T  4505335 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccc-tccattaatactctg-cacactactttcaaag 4505432  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  4505433 tattagtttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 4505484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 25231173 - 25231281
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||  |||||||||| || |||||| |||||||||    
T  25231173 ttgttttaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttctattgtaccctataattaatactttg-tacactacttccaaag 25231271  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  25231272 tattactttt 25231281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 52915701 - 52915593
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| | | ||||||||||| ||  ||||| |||||||||    
T  52915701 ttgtttcaaaatgaatgtcgctttcagtttccaatgcaataataactttttcttttcaattgtatcatccaattaatactctg-cacactacttccaaag 52915603  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  52915602 tattactttt 52915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 44650893 - 44651048
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||| |||||||||||||||||||||||||| ||    |||||||||| | |||||  ||||||||||||| | ||||| ||| |||| ||||||     
T  44650893 aaaatgaacgtcactttcagttttcaatgcaataaaaaaaaattcttttcaattatacccaacaattaatactatat-acactactttcaaaatattata 44650991  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    || |||||||||||||| |||  |||||  ||||| |||||||||||||||||||||    
T  44650992 ttgtctttaatgaaaaataaactaatagccgattatgataatttggtaaaataacat 44651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 39982106 - 39982173
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaat 216  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  39982106 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaat 39982173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 302
Target Start/End: Original strand, 39984894 - 39984973
Alignment:
Q  223 tatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  39984894 tatgttacactacttccaaagtataattgtttctttaatgaaaaacaaatcaatagttgattagaataatttgataaaat 39984973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 21864535 - 21864434
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| ||  ||||| |||||||||||||| |    
T  21864535 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttccaaagtattact 21864437  T
Q  251 ttt 253  Q
    |||    
T  21864436 ttt 21864434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 21920396 - 21920295
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||| ||  ||||| |||||||||||||| |    
T  21920396 aaaatgaatgttactttcagtttccaatgcaataataactttttcttttcaattgtatcctccaattaatactctg-cacactacttccaaagtattact 21920298  T
Q  251 ttt 253  Q
    |||    
T  21920297 ttt 21920295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 239 - 307
Target Start/End: Complemental strand, 30780085 - 30780016
Alignment:
Q  239 caaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30780085 caaagtattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttagtaaaataacat 30780016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 51733653 - 51733545
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| |||||||||| |  |||||||| ||||||||||| ||  ||||| |||||||||    
T  51733653 ttgtttcaaaatgaatgtcactttcagtttctaatgcaataataattttttctttttacttgtaccctccaattaatactctg-cacactacttccaaag 51733555  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  51733554 tattactttt 51733545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 27943705 - 27943627
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactt-tttcttttcaactgtacccttcaattaata 221  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||| | ||||||||||||||||    
T  27943705 ttgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttcttttttttcaattatacccttcaattaata 27943627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 304
Target Start/End: Complemental strand, 36558452 - 36558299
Alignment:
Q  153 aatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt-- 250  Q
    |||||||| || ||||| ||| | |||||||||||||||||||||  ||| ||||| || |||| |||||| ||| ||| | || |||||||||||||      
T  36558452 aatgaatgccattttcaatttcccatgcaataataactttttcttcccaattgtactctccaatgaatactgtgt-acattactcccaaagtattattac 36558354  T
Q  251 -ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
     ||| ||||| || |||||||| |||||||| || ||||||||||||||||||||    
T  36558353 ttttactttagtggaaaacaaaccaatagttaataaggataatttggtaaaataa 36558299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 220
Target Start/End: Original strand, 31917920 - 31918030
Alignment:
Q  110 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    ||||| ||||| ||||||||||||| |       |||||| ||||||||| |||||||||| || |||||||||||||  ||||||||||||| | ||||    
T  31917920 tgttttaaaataagtgtcgttttagataaaaaaattgttttaaaatgaatttcactttcagcttccaatgcaataatagttttttcttttcaattttacc 31918019  T
Q  210 cttcaattaat 220  Q
    |||||||||||    
T  31918020 cttcaattaat 31918030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 44061073 - 44061154
Alignment:
Q  227 ttacactgcttccaaagtattattttttc-tttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||| ||| |||| |||||||||||  |||||||||||||||| ||||||||||||| |||||||| ||||||||||||    
T  44061073 ttacactacttgcaaaatattatttttttatttaatgaaaaacaaaccaatagttgattatgataatttagtaaaataacat 44061154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 253
Target Start/End: Complemental strand, 38510379 - 38510296
Alignment:
Q  169 agttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttt 253  Q
    |||||||||||||||||||||||||||||||||| |||||| | ||||||||||| |   ||||| |||||||||||||| ||||    
T  38510379 agttttcaatgcaataataactttttcttttcaattgtaccatccaattaatactct-acacactacttccaaagtattactttt 38510296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 200
Target Start/End: Complemental strand, 50621341 - 50621290
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc 200  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  50621341 tcaaaataaatgtcactttaagttttcaatgcaataataactttttcttttc 50621290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 24157183 - 24157264
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||||||||| ||||||| ||| |||||  ||||||||||||| |||||||||| || |||| |||| ||||||||||||    
T  24157183 ttgtttcaaaataaatgtcaattttagtttctaatgcaataataattttttctttttaattgtatcctttaattaatactat 24157264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 19903257 - 19903199
Alignment:
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||| |||||||| |||  |||||||| ||||||||||||    
T  19903257 ttttttctttaatgaaaaacaaaccaatagtttattcagataattttgtaaaataacat 19903199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44061006 - 44061071
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    |||||| | ||||||||||||||||| |||  ||| ||||||||||||||||||||||| ||||||    
T  44061006 ttgttttataatgaatgtcactttcattttctaatacaataataactttttcttttcaattgtacc 44061071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 18053079 - 18052999
Alignment:
Q  196 ttttcaactgtacccttcaattaatactatgttacactgcttcc-aaagtattattttttctttaatgaaaaacaaatcaata 277  Q
    ||||||| ||||||||||||||||||||||  || ||| ||||| ||||||||||||| | |||||| |||||||||||||||    
T  18053079 ttttcaattgtacccttcaattaatactat-atatactacttccaaaagtattattttct-tttaataaaaaacaaatcaata 18052999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 30780264 - 30780218
Alignment:
Q  171 ttttcaatgcaataataactttttcttttcaactgtacccttcaatt 217  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  30780264 ttttcagtgcaataataactttttcttttcaattgtactcttcaatt 30780218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 219
Target Start/End: Original strand, 33033076 - 33033156
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataata-----actttttcttttcaactgtacccttcaattaa 219  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||     ||||||| ||||||| |||||| || ||||||    
T  33033076 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataaaataactttttattttcaattgtaccatttaattaa 33033156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 9809722 - 9809621
Alignment:
Q  204 tgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    |||||||  ||||||||||||||  ||||| ||| ||||||||||||||| |||||| | ||||| || |||||  | |  ||||||||||| |||||||    
T  9809722 tgtacccaccaattaatactatgc-acactactttcaaagtattatttttactttaaaggaaaactaaccaataaataacaaggataatttgataaaata 9809624  T
Q  304 aca 306  Q
    |||    
T  9809623 aca 9809621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 47774938 - 47774865
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataa-ctttttcttttcaactgtacccttcaattaatacta 224  Q
    ||||||||| |||||||  |||||||||||||| |||  ||||| ||||||| ||||||||  |||||||||||    
T  47774938 aaatgaatgacactttcgattttcaatgcaatattaatattttttttttcaattgtaccctctaattaatacta 47774865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 55092607 - 55092567
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaata 184  Q
    |||||||||||||||||||| ||||  ||||||||||||||    
T  55092607 ttgtttcaaaatgaatgtcattttcgattttcaatgcaata 55092567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 9e-73; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 39698854 - 39698663
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  39698854 gtttcaaaatgagtgtcgttttagccaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccc 39698755  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39698754 ttcaattaatactatgttacattacttccaaaatattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 39698663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 111 - 302
Target Start/End: Original strand, 4989443 - 4989634
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| ||||||||||||||||||||        |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4989443 gttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatatcactttcagtttccaatgcaataataactttttcttttcaattgtaccc 4989542  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  4989543 ttcaattaatattatgttacactacttacaaagtattattttttctttaatgaaaaacaaatcaatagttgagtaggataatttgggaaaat 4989634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 40228572 - 40228730
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||||| | |||||||||    
T  40228572 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacatttcaattaatattatgttacattacttccaaag 40228671  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40228672 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 40228730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 9880689 - 9880498
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| ||||||||||||||||||||        ||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||| | | |||    
T  9880689 gttttaaaatgagtgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcactcacagtttccaatgcaataataattttttcttttcaattatgccc 9880590  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  9880589 ttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaataaatcaatagttgattaggataatttcgtaaaat 9880498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 104 - 302
Target Start/End: Complemental strand, 43084821 - 43084624
Alignment:
Q  104 tccatttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaac 203  Q
    ||||| |||||||||||||||||||||||||         || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  43084821 tccatctgtttcaaaatgagtgtcgttttagc-aaaaaaattattttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaat 43084723  T
Q  204 tgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  43084722 tgtacctttcaattaatactatgttacactacttccaaaaaattattttttctttaatgaaacacaaaccaatagttgattagggtaatttggtaaaat 43084624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 17920954 - 17921113
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||||||||||| |||||||||    
T  17920954 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttctttacaattgtactcttcaattaatattatgttacactacttccaaag 17921053  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  17921054 tattatttttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 17921113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 39463257 - 39463413
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  39463257 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaag 39463355  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  39463356 tattattttttctttaatgaaaaacaaaccaacagttgattaggataa-ttggtaaaat 39463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 43448714 - 43448872
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| | ||| |||||    
T  43448714 ttgtttcaaaatgaatatcactttcagtttccaatgcaataataacttttttttttcaattgtacccttcaattaatactacgttacattactttcaaag 43448813  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  43448814 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 43448872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 29025901 - 29025746
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||   ||||||| |    
T  29025901 ttgtttcaaaacgaatgtcactttaagtttccaatgcaataataactttttcttttcaattctacccttcaattaatactatgttaca---cttccaatg 29025805  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29025804 tattattttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaat 29025746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 6374412 - 6374573
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||  |||| | |||||||||    
T  6374412 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgta-ccttcaattaatattat-atacattacttccaaag 6374509  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  6374510 tattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaataacat 6374573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 4760713 - 4760556
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| ||| |||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  4760713 ttgttttaaaatgaatgtcactttcattttccaatgcaacaataattttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 4760614  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4760613 tattat-ttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 4760556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 152 - 302
Target Start/End: Complemental strand, 31899395 - 31899245
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    ||||| || ||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||| |    
T  31899395 aaatggatatcactttcagtttccaatgcaataataattttttcttttcaattgtactcttcaattaatattatgttacactacttccaaagtattatct 31899296  T
Q  252 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31899295 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 31899245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 9304788 - 9304631
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||  ||||||| ||| ||||||||     
T  9304788 ttgtttcaaaatgaatgtgacttttagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatgttatgttatactacttccaaaa 9304689  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9304688 tattattttttctttaa-gaaaaacaaatcaatagttgattaggataatttggtaaaat 9304631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 7839456 - 7839614
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||| | |||| ||||||||||| ||||||||||| ||||||||     
T  7839456 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataaccttttcttttcaattttacctttcaattaatattatgttacactacttccaaaa 7839555  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||    
T  7839556 tattattttttctttaatgaaaaataaaccaatagttgattaagataattcggtaaaat 7839614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 9812171 - 9812333
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||| ||||| ||||| ||| | ||||| ||| |||||    
T  9812171 ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttattttcaattgtacctttcaagtaatattatat-acactactttcaaag 9812269  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9812270 tacaattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 9812333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 31693776 - 31693616
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||  ||||||||    
T  31693776 ttgttttaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacact-attccaaag 31693678  T
Q  244 tattattttttctttaatgaaaaacaaatcaat---agttgattaggataatttggtaaaat 302  Q
    ||||||||| ||||||||||||||||||  |||   |||||||||||||||||| |||||||    
T  31693677 tattattttatctttaatgaaaaacaaactaataccagttgattaggataatttagtaaaat 31693616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 514879 - 515037
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatacta-tgt-tacactgcttccaaagtatta 248  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||| || | | |||||| ||||| ||||||||    
T  514879 aaaatgaatgtcactttcaattttcaatgcaataataattttttcttttcaattgtatccttcaattaataatactatatacactacttccgaagtatta 514978  T
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  514979 tattttctataatgaaaaacaaaccaatagttgattaggataatttgctaaaataacat 515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 34156539 - 34156694
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    ||||||||| |||||| | |||| |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||| |||||||| ||||||    
T  34156539 aaaatgaatatcacttacggtttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgt-acactacttccaaaatattat 34156637  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||| ||||||||||    
T  34156638 tttttctttaatgaaaaacaaaccaatggttgattatgataatttgataaaataaca 34156694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 300
Target Start/End: Original strand, 44713532 - 44713688
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | |||||||||||||||| | ||||||||| ||| ||||     
T  44713532 ttgttttaaaatgaatatcactttcattttccaatgcaataataacttttttttttcaattatacccttcaattaatattgtgttacactactttcaaaa 44713631  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaa 300  Q
    |||||||||||||||||||||||| |||  |||||||||||| ||||||||||||||    
T  44713632 tattattttttctttaatgaaaaataaactaatagttgattatgataatttggtaaa 44713688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 5295556 - 5295402
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta 248  Q
    ||||||||||||||||||| |||||  ||||||||||||| ||||||||||||| |||||||||||||||||| |||  |||||| |||||||| |||||    
T  5295556 tcaaaatgaatgtcactttaagtttctaatgcaataataattttttcttttcaattgtacccttcaattaatattat-atacactacttccaaaatatta 5295458  T
Q  249 -ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
     ||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  5295457 tttttttcattaataaaaaacaaagcaatagttgattaggataatttggtaaaata 5295402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 45359049 - 45358887
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||||||| ||||   ||||||||||| ||| | ||||| |||||||||    
T  45359049 ttgtttcaaaatgactgtcattttcaattttcaatgcaataataattttttcttttcaattgtatttttcaattaatattatat-acactacttccaaag 45358951  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||  ||||||||||||  |||||| |||||||||||||    
T  45358950 tattattttttctttaatgaaaaacaaactaatagttgattaaaataattcggtaaaataacat 45358887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 34796833 - 34796674
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||  |||| |||||  ||||||||||||| ||||||||||||| || ||||||||||||||  |||   ||||| |||||||||    
T  34796833 ttgtttcaaaatgaatgttccttttagtttctaatgcaataataattttttcttttcaattgaacccttcaattaattatat---acactacttccaaag 34796737  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  34796736 tattatttttt-tttaatgaaaaacaaaccaatagttgattaggataatttgataaaataacat 34796674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 19438234 - 19438362
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| |||| ||||||||| ||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||     
T  19438234 ttgtttcgaaataaatgtcactctcagtttccaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaaa 19438333  T
Q  244 ta-ttattttttctttaatgaaaaacaaa 271  Q
    || ||||||||||||||||||||||||||    
T  19438334 tatttattttttctttaatgaaaaacaaa 19438362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 19574384 - 19574512
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagtttt-caatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    ||||||| |||| ||||||||| |||||||  ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||    
T  19574384 ttgtttcgaaataaatgtcactctcagtttcgcaatgtaataataactttttcttttcaattgtacccttcaattaatactatattacactacttccaaa 19574483  T
Q  243 gtattattttttctttaatgaaaaacaaa 271  Q
     ||||||||||||||||||||||||||||    
T  19574484 atattattttttctttaatgaaaaacaaa 19574512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 13368103 - 13367941
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||  | ||| | ||| ||| ||| ||||||||||| |||||||||||| || ||||||||||||||| ||| | ||||| |||||||||    
T  13368103 ttgtttcaaaatgggtatcattatcaatttccaacgcaataataacattttcttttcaattgcacccttcaattaatattatat-acactacttccaaag 13368005  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||| ||| || || |||||||||||||| ||||||||||||||    
T  13368004 tattattttttctttaatgaaaaataaaccagtaattgattaggataatatggtaaaataacat 13367941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 13496240 - 13496398
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagta---tt 247  Q
    ||||||||||| | ||||| ||| ||||||||||||||| |||||||||||| |||||  ||||||||||||| | | ||||| |||||||||||   ||    
T  13496240 aaaatgaatgttattttcaatttccaatgcaataataacgttttcttttcaattgtacaattcaattaatactgtat-acactacttccaaagtagtatt 13496338  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||| || |||||||||| ||||| |||||||||||||||||||||||||||||    
T  13496339 attttttcttgaaagaaaaacaaaccaataattgattaggataatttggtaaaataacat 13496398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 14234373 - 14234208
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatacta-tgt-tacactgcttccaa 241  Q
    |||||| ||||||||||||||||| | |||  |||||||||||||  |||| ||||||| ||||||||| | |||||| || | | |||||| |||||||    
T  14234373 ttgttttaaaatgaatgtcacttttaatttctaatgcaataataatatttttttttcaattgtaccctttagttaataatactatatacactacttccaa 14234274  T
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | ||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||    
T  14234273 aatattattttttctttaacgaaaaacaaaccaatagttgattaggataatttggcaaaataacat 14234208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 15227565 - 15227730
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| | |||||||||||  |||| ||||||||||||||||  |||||  ||| |||||    
T  15227565 ttgtttcaaaatgaatgtcactttcaaatttcaatgcaataataaatgtttcttttcaatggtacacttcaattaatactat-atacacaactttcaaag 15227663  T
Q  244 tatta---ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||   |||||||||||||||||||||||  |||  |||||||| |||||||| |||||||||||    
T  15227664 tattatttttttttctttaatgaaaaacaaactaatgattgattagaataatttgataaaataacat 15227730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 29312341 - 29312185
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaa---agtatt 247  Q
    ||||||||||||| ||||||||| |||||||||||||||  ||| ||||||| ||||| ||||||||||||||||  |||||| ||||  |   ||||||    
T  29312341 aaaatgaatgtcattttcagtttccaatgcaataataaccgtttgttttcaattgtactcttcaattaatactat-atacactacttcagaagtagtatt 29312243  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||  ||||||||||||    
T  29312242 attttttctttaatgaaaaacaaaccaatagttgattagtataatt--gtaaaataacat 29312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 39766014 - 39765907
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||  ||||| |||||||||    
T  39766014 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc-actgtaccctccaattaatactctg-cacactacttccaaag 39765917  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  39765916 tattactttt 39765907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 15160601 - 15160451
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| ||||||||     
T  15160601 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaaa 15160503  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  15160502 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 15160451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 5790775 - 5790643
Alignment:
Q  172 tttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatttttt--ctttaatgaaaaaca 269  Q
    |||||||| ||||||| | |||||||||||| | || ||||||||||||| ||| ||||||| ||| |||| |||||||||||  || ||||||||| ||    
T  5790775 tttcaatgtaataatagccttttcttttcaattttatccttcaattaatattatcttacactactttcaaaatattattttttttctctaatgaaaagca 5790676  T
Q  270 aatcaatagttgattaggataatttggtaaaat 302  Q
    || ||||||||||||||||||||||||||||||    
T  5790675 aaccaatagttgattaggataatttggtaaaat 5790643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 291
Target Start/End: Complemental strand, 6116160 - 6116020
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||||||||  ||||||||||  |||||| ||||||| |    
T  6116160 ttgttttaaaatgaatatcactttcggttttcaatgcaataataactttttcttttcaattatacccttcgtttaatactat-atacactacttccaagg 6116062  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataa 291  Q
          ||||| |||||||||||||||| ||||||||||||| |||||    
T  6116061 ------tttttttttaatgaaaaacaaaccaatagttgattaagataa 6116020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 40362433 - 40362512
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||    
T  40362433 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattttaccctccaattaatact 40362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 197 - 304
Target Start/End: Complemental strand, 15750435 - 15750325
Alignment:
Q  197 tttcaactgtacccttcaattaatacta-tgt-tacactgcttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatt 293  Q
    |||||| |||||||||||||||||| || | | |||||| |||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||    
T  15750435 tttcaattgtacccttcaattaataatactatatacactacttccaaagtattatttttttctttaatgaaaaataaaccaatagttgattaggataatt 15750336  T
Q  294 tggtaaaataa 304  Q
    |||||||||||    
T  15750335 tggtaaaataa 15750325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 209 - 307
Target Start/End: Complemental strand, 40399967 - 40399870
Alignment:
Q  209 ccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||| ||| | ||||| ||| |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  40399967 ccttcaattaatattatat-acactactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaataacat 40399870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 17655906 - 17656013
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||||| ||| |||||    
T  17655906 ttgtttcaaaat-aatgttaccttcagttttcaatgcaataataactttttcttttcaactgtaccctccaattaatactctg-cacactacttgcaaag 17656003  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  17656004 tattactttt 17656013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 35356308 - 35356391
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttac 230  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||    
T  35356308 tttcaaaatgaatatcattttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttac 35356391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 31234084 - 31233934
Alignment:
Q  154 atgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccctt-caattaatactatgttacactgcttccaaagtattatttt 252  Q
    |||||||||||||| |||||| |||||||||||||||| || ||||||| |||| |||| ||||||||| ||| | ||  | |||| ||| |||||||||    
T  31234084 atgaatgtcacttttagtttttaatgcaataataacttctt-ttttcaattgtatcctttcaattaatattatat-acggtacttctaaattattatttt 31233987  T
Q  253 ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    | ||||||||||||| ||| ||||||||||||||||| |||| ||||| ||||    
T  31233986 tcctttaatgaaaaataaaccaatagttgattaggatgattttgtaaagtaac 31233934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 41679338 - 41679471
Alignment:
Q  165 tttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaa 264  Q
    |||||||||||||| |||||||||||||||||||| || | ||  |||||| ||||||        ||| |||  ||| |||||||||||||||||||||    
T  41679338 tttcagttttcaatacaataataactttttctttttaattttattcttcaactaatac--------actacttttaaaatattattttttctttaatgaa 41679429  T
Q  265 aaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    || |||| ||||||||||||| ||||||||||||||||||||    
T  41679430 aatcaaaccaatagttgattatgataatttggtaaaataaca 41679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 43970116 - 43970044
Alignment:
Q  235 cttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||    
T  43970116 cttctaaagtattattttttctttaataaaagacaaatcaatagttgattaggataatttgataaaataacat 43970044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 2375996 - 2375839
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||| | ||| |||||||||| ||| |||||| |||||| |||||| ||||||||||||||||||||| |||  ||||||  ||||||      
T  2375996 ttgttttaaaatgattatcattttcagtttttaatacaataacaactttatctttttaactgtacccttcaattaataatat-atacactatttccaa-- 2375900  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
       | ||||||||||||||||||||||| ||||  ||||||| || |||||| |||||||||||    
T  2375899 ---ttttttttctttaatgaaaaacaaaccaatgattgattaagacaatttgataaaataacat 2375839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 37559688 - 37559609
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  37559688 ttgttttaaaatcaatgtcactttcagtttccaatacaataataactttttcttttcaattgtaccctccaattaatact 37559609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 396369 - 396261
Alignment:
Q  144 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||| |||||||||||| ||  ||| |||||||| |    
T  396369 ttgttttaaaatgaatgtcacttttcagtttgaaatgcaataataactttttcttttcaattgtaccc-tcaattaatactttg-cacattgcttccata 396272  T
Q  243 gtattattttt 253  Q
    |||||| ||||    
T  396271 gtattactttt 396261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 36669849 - 36669791
Alignment:
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  36669849 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 36669791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 36921362 - 36921434
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||||||||| |||||| | |||||||||||    
T  36921362 aaaatgaacgtcactttcaattttcaatgcaataataattttttcttttcaattgtaccttccaattaatact 36921434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 43974943 - 43974888
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43974943 tttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaa 43974888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 303
Target Start/End: Original strand, 42179155 - 42179251
Alignment:
Q  206 tacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    |||| ||||||||||||||| | |||||  ||  ||||||||||||||||||||||||||||||||  ||||||| |||| |||||||| ||||||||    
T  42179155 taccattcaattaatactatat-acactattttaaaagtattattttttctttaatgaaaaacaaactaatagttaattatgataatttagtaaaata 42179251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 43724379 - 43724459
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt-ttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||| ||||||||||||| |||||||||||||| ||||| || ||||| |||||| | |||||||||||    
T  43724379 ttgtttcaaaatgaatttcactttcagtttccaatgcaataataatttttttttcttcaattgtaccttccaattaatact 43724459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 43561415 - 43561481
Alignment:
Q  239 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||||||||||||||||||||||||||| |||| |||  ||||||| ||||||||| |||||||||    
T  43561415 caaagtattattttttctttaatgaaaaataaattaatgattgattaagataatttgataaaataac 43561481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 40400124 - 40400066
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    ||||||||||| ||||| ||||| |||||||| ||||| ||||||||||||| ||||||    
T  40400124 aaaatgaatgtgacttttagtttccaatgcaacaataattttttcttttcaattgtacc 40400066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 193
Target Start/End: Original strand, 43561344 - 43561386
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttt 193  Q
    |||||||||||||| ||||||||||||||||||||||| ||||    
T  43561344 aaaatgaatgtcaccttcagttttcaatgcaataataattttt 43561386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 44342918 - 44342865
Alignment:
Q  167 tcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaat 220  Q
    ||||||| ||||  |||||||||||||||||||||| ||||||||| |||||||    
T  44342918 tcagtttccaatataataataactttttcttttcaattgtaccctttaattaat 44342865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 40400441 - 40400505
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    ||||| ||||||||||||||||| |||||  |||  |||||||| ||||||||||||| ||||||    
T  40400441 tgttttaaaatgaatgtcacttttagtttctaatataataataattttttcttttcaattgtacc 40400505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 151 - 202
Target Start/End: Original strand, 43594834 - 43594885
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    |||||||||||| |||| | |||||||| ||||||||||||||| |||||||    
T  43594834 aaaatgaatgtcgcttttaattttcaatacaataataactttttattttcaa 43594885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 12339716 - 12339787
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttctttt--caactgtacccttcaattaata 221  Q
    ||||||||||||| ||| |||||||||| ||||||||| ||||||||||  ||| ||||| || |||||||||    
T  12339716 aaaatgaatgtcatttttagttttcaatacaataataa-tttttctttttccaattgtacactccaattaata 12339787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 9e-73; HSPs: 86)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 12342091 - 12342249
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  12342091 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 12342190  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12342191 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 12342249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 441386 - 441228
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||    
T  441386 ttgtttcaaaatgaatgtcactttctgttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaccacttccaaag 441287  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  441286 tattattttttctttaatgaaaaacaaaccaatggttgattaggataatttggtaaaat 441228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 29396835 - 29396677
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | |||||||||||||||| ||||||||||| |||||||||    
T  29396835 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattatacccttcaattaatattatgttacactacttccaaag 29396736  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29396735 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29396677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 38926604 - 38926762
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  38926604 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataacttctttttttcaattgtacccttcaattaatactatgttacactacttccaaag 38926703  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  38926704 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 38926762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 45082052 - 45081897
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||    
T  45082052 tttcacaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatattatgttacactacttccaaagcat 45081953  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45081952 tattttttctttaatgaaaaacaaaacaatagttgattaggataatttggtaaaat 45081897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 18719579 - 18719426
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||  || |||||||||||||    
T  18719579 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactattttcaaagtattattt 18719481  T
Q  252 tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18719480 tttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataaca 18719426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 4133022 - 4133178
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||    
T  4133022 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcttttcaattgtacccttca--taatactatgttacactacttccaaag 4133119  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||    
T  4133120 tattattttttccttaaagaaaaacaaaccaatagttgattaggataatttggtaaaat 4133178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 29808810 - 29808969
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||| ||||||||||| |||||||||    
T  29808810 ttgttttaaaatgaatgtcactttcagttttcaatgcaatcataactttttcttttcaatcgtacccttcacttaatattatgttacactacttccaaag 29808909  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29808910 tattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 29808969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 4288866 - 4288708
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||| ||||||||||||| || ||| ||||||||||||||||||||||| |||||||||    
T  4288866 ttgtttcaaaatgaatatcacttacagtttctaatgcaataataattttttcttttcaattgcaccattcaattaatactatgttacactacttccaaag 4288767  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  4288766 tattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 4288708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 6220559 - 6220401
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||     
T  6220559 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaactgtacctttcaattaatattatgttacactacttccaaat 6220460  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  6220459 tattattttctttttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 6220401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 13561992 - 13562150
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| |||||||||    
T  13561992 ttgtttcaaaataaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtacccttcaattaatgttatgttacactacttccaaag 13562091  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||||||| |||||||    
T  13562092 tattattttttatttaatgaaaaacaaaccaatggttgattaggataatttagtaaaat 13562150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 32228166 - 32228008
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | ||| |||||    
T  32228166 ttgttttaaaatgaatgtcacttttggttttaaatgcaataataactttttcttttcagttgtacccttcaattaatactatgttacaatactttcaaag 32228067  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  32228066 tattattttttctttaatgaaaaacaacccaatagttgattaggataatttggtaaaat 32228008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 37038921 - 37038762
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||   |||||||||||||| | |||||||||||||||| ||| | ||||| ||| |||||    
T  37038921 ttgttttaaaatgaatgtcactttcagttttcaatgcaataa---ctttttcttttcaattatacccttcaattaatattatat-acactactttcaaag 37038826  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  37038825 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 37038762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 25383639 - 25383482
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||| |||||    
T  25383639 ttgttttaaaatgaatgttattttcagtttccaatgcaataataactttttcttttcaattgtacc-ttcaattaatattatgttacactactttcaaag 25383541  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25383540 tattactatttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaat 25383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 161 - 302
Target Start/End: Original strand, 1423206 - 1423347
Alignment:
Q  161 tcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaa 260  Q
    ||||||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||    
T  1423206 tcactttcagttttcaatggaataataacttattcttttcaattatacccttcaattaatagtatgttacactacttccaaaatattattttttctttaa 1423305  T
Q  261 tgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| ||||||| ||||||||||||||||||||||||||||||    
T  1423306 tgagaaacaaaccaatagttgattaggataatttggtaaaat 1423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 146 - 302
Target Start/End: Original strand, 30855105 - 30855261
Alignment:
Q  146 gtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagta 245  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||| ||||||||  |    
T  30855105 gtttcaaaatgaatgtcactctcagtttccaatgcaataataa-tttttcttttcaattgtaccatttaattaatactatgttacactacttccaaaaca 30855203  T
Q  246 ttatttt-ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30855204 ttatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 30855261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 18579165 - 18579322
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||  |||||| |||||||||    
T  18579165 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgcacccttcaattaatactat-atacactacttccaaag 18579263  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||| |||||||||||||||||||||||| ||||||||||     |||||| |||||||||||||    
T  18579264 tataattttttctttaatgaaaaacaaaccaatagttga-----ataattcggtaaaataacat 18579322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 4658388 - 4658224
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||    
T  4658388 ttgtttcaaaatgaatgtctttttcatttttcaatgtaataataattttttcttttcaattgtacccttcaattaatactat-atacactactttcaaag 4658290  T
Q  244 tatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  4658289 tattaatttttttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaataacat 4658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 12566135 - 12565976
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| |||||| ||||||||||| |||  ||||||||||||||||    
T  12566135 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttttttcaattgtaccattcaattaatattat-atacactgcttccaaag 12566037  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||| ||||| |||||||||||||||||||||||  |||| || ||||||||||||||||||    
T  12566036 tataattttgtctttaatgaaaaacaaatcaatgattgagtaagataatttggtaaaataa 12565976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 16807672 - 16807514
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||  |||||||||    
T  16807672 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaag 16807573  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||||||    
T  16807572 aattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaat 16807514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 16846953 - 16846795
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||  |||||||||    
T  16846953 ttgtttcaaaataaatgtcactttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatacaatggtacaccacttccaaag 16846854  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||| |||||||||||||||||||||  ||||||||||||| |||||||| ||||||    
T  16846853 aattatattttctttaatgaaaaacaaacaaatagttgattagaataatttgataaaat 16846795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 12394076 - 12393916
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgt--tacactgcttccaa 241  Q
    |||||||||||||||||| |||||||||||  ||||||||||||||||||| |||| || |||||||||||||||||| |||||  ||||||  || |||    
T  12394076 ttgtttcaaaatgaatgttactttcagtttctaatgcaataataactttttatttttaattgtacccttcaattaatattatgttatacactattttcaa 12393977  T
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12393976 agtaatattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 12393916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 8540036 - 8540199
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||| || ||||||||| || |||||||||||||||||||||| || |||||||||||||||||| ||| ||||||| |||| |||     
T  8540036 ttgttttaaaatgaatgacattttcagtttccagtgcaataataactttttctttttaattgtacccttcaattaatattat-ttacactacttctaaaa 8540134  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||    
T  8540135 tattatttttttctttaatgaaaaacaaactaatagttgattaggataatttgataaaataacat 8540199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 151 - 302
Target Start/End: Original strand, 42004896 - 42005046
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||| ||| | ||| |||||||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||    
T  42004896 aaaatgaatgtcatttttaatttccaatgcaataataattttttattttcaattgtacccttcaattaatattatgttacactacttccaaagtattatt 42004995  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||| |||||| |||||||||  |||||||||||||||||||||||| ||||    
T  42004996 gtttttttaat-aaaaacaaacaaatagttgattaggataatttggtgaaat 42005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 19164358 - 19164514
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    |||||||||||||| || ||||| |||| |||||||||||||||||||||||| || |||| ||||||||||||| |||  |||||| ||| ||||||||    
T  19164358 tttcaaaatgaatggcaatttcaatttttaatgcaataataactttttctttttaattgtatccttcaattaatattat-atacactactttcaaagtat 19164456  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| |||||| ||||||||||||   ||||||||||||||||||||    
T  19164457 tattttttctttaatgaataacaaaccaatagttgatt---ataatttggtaaaataacat 19164514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 8774054 - 8774208
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| || |||| ||||| |||| ||||||||||| |  |||||||| ||||| ||||||||||||| |||||||||| |||||||||    
T  8774054 ttgtttaaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaag 8774150  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8774151 tattatttt-tctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 8774208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 8789581 - 8789427
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| || |||| ||||| |||| ||||||||||| |  |||||||| ||||| ||||||||||||| |||||||||| |||||||||    
T  8789581 ttgttttaaaatgaatatcgcttttagtttccaatacaataataactgt--cttttcaattgtactcttcaattaatac-atgttacactacttccaaag 8789485  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  8789484 tattattttt-ctttaatgaaaaataaaccaatagttgattaggataatttggtaaaat 8789427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 157 - 302
Target Start/End: Original strand, 42753756 - 42753903
Alignment:
Q  157 aatgtcactttcagttttcaatgcaataataactttttc-ttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt-tttt 254  Q
    |||||||||||||||||||||||| |||||||||||||  |||| || ||||  ||||||||||| |||||||||||| ||||||||||| |||| ||||    
T  42753756 aatgtcactttcagttttcaatgcgataataacttttttatttttaattgtattcttcaattaatgctatgttacactacttccaaagtactattatttt 42753855  T
Q  255 ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  42753856 ttttaaagaaaaacaaatcaatagttgattaggatgatttggtaaaat 42753903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 43971502 - 43971646
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||                |||| ||||    
T  43971502 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtgcccttcaatta----------------cttctaaag 43971585  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  43971586 tattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaataa 43971646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 36106554 - 36106400
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||   ||| |||||||||  ||||||||||||||||     ||||||||||||||||||||||||||| ||||||| |    
T  36106554 ttgttttaaaatgaatgtcacttttgttttccaatgcaatgctaactttttcttttcac----acccttcaattaatactatgttacactacttccaatg 36106459  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||| ||||||||  ||||||||||||| ||||||||||||||||    
T  36106458 tattattttttttttaataaaaaacaatccaatagttgattaagataatttggtaaaat 36106400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 144 - 299
Target Start/End: Complemental strand, 43481026 - 43480870
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagt-tttcaatgca-ataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaa 241  Q
    |||||||||||||| ||||| ||||||| |||||||||| ||||||||||||||||||||| | |||| || |||||||||| | | ||||  |||||||    
T  43481026 ttgtttcaaaatgactgtcattttcagtgtttcaatgcatataataactttttcttttcaattataccttttaattaatactttat-acacaacttccaa 43480928  T
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaa 299  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||    
T  43480927 agtattattttttctttaatgaaaaacaaaccaatagtttattaggataatttagtaa 43480870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 7028967 - 7028845
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||| ||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||  |||||| ||| |||||    
T  7028967 ttgtttcaaaatgaatgtcattttcactttccaatgcaataatgactttttcttttcaaatgtacccttcaattaatactat-atacactactttcaaag 7028869  T
Q  244 tattattttttctttaatgaaaaa 267  Q
    |||||||||||||||||| |||||    
T  7028868 tattattttttctttaataaaaaa 7028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 36685895 - 36685734
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||| ||||||| |||  ||| ||||||||| ||||||||||||| ||||||||||||||||||||||   ||||| |||  |||     
T  36685895 ttgttttaaaatgaatgttactttcaatttcaaatacaataataattttttcttttcaattgtacccttcaattaatactat-aaacactactttgaaaa 36685797  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||    
T  36685796 tattattttttctttgatg-aaaacaaaccaataattgattaggataatttggtaaaataacat 36685734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 33482384 - 33482222
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||| | ||||||||| |||||||  ||||||||||||||||||| |||||||||||| |||  |||| |  ||| ||||    
T  33482384 ttgttttaaaatgaatgtcacttttatttttcaatgtaataatatttttttcttttcaactgtactcttcaattaataatat-atacattatttcgaaag 33482286  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| |||||| ||||| ||||||||| ||| |||||| |||||||||||||||| |||||||    
T  33482285 tattaatttttccttaataaaaaacaaaccaaaagttgaataggataatttggtaagataacat 33482222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 43427442 - 43427334
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  || || |||||||||    
T  43427442 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttg-cacgctacttccaaag 43427344  T
Q  244 tattattttt 253  Q
    ||||||||||    
T  43427343 tattattttt 43427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 29411694 - 29411826
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| || |||||||||||||||||| |||  |||| | ||| ||||     
T  29411694 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataaccttttctttttaattgtacccttcaattaatattat-atacattactttcaaaa 29411792  T
Q  244 tattattttttctttaatgaaaaacaaatcaata 277  Q
    ||||||||||||| ||| |||||||||| |||||    
T  29411793 tattattttttctctaaggaaaaacaaaccaata 29411826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 42743080 - 42743184
Alignment:
Q  197 tttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgg 296  Q
    |||||| |||| ||||||||||||| ||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  42743080 tttcaattgtatccttcaattaatattatgttacactactttcaaagtatt-ttttttctttaataaaaaacaaatcaataattgattaggataatttgg 42743178  T
Q  297 taaaat 302  Q
    ||||||    
T  42743179 taaaat 42743184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 267
Target Start/End: Complemental strand, 7042341 - 7042219
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||| ||  |||||||||||| |||||||||||| || ||||||||||||||||||||||  |||||| ||| |||||    
T  7042341 ttgtttcaaaatgaatgtcattttcacttcccaatgcaataatgactttttctttttaaatgtacccttcaattaatactat-atacactactttcaaag 7042243  T
Q  244 tattattttttctttaatgaaaaa 267  Q
    |||| ||||||||||||| |||||    
T  7042242 tattcttttttctttaataaaaaa 7042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 10195733 - 10195835
Alignment:
Q  204 tgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    |||||||||||||||||  ||| | ||||| |||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10195733 tgtacccttcaattaatgatatat-acactacttccaaaatattattttttctttaataaaaaacaaaacaatagttgattaggataatttggtaaaata 10195831  T
Q  304 acat 307  Q
    ||||    
T  10195832 acat 10195835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 151 - 253
Target Start/End: Complemental strand, 16463180 - 16463079
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||  ||||| |||||||||||||| |    
T  16463180 aaaataaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaataccctg-cacactacttccaaagtattact 16463082  T
Q  251 ttt 253  Q
    |||    
T  16463081 ttt 16463079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 40608751 - 40608601
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||| ||||  ||| |||||||  ||| | ||||| ||   ||| |||||||    
T  40608751 aaaatgaatgtcactttcagttt-caatgcaataataactttctcttt-caattgtatactttaattaatcttatat-acactactattaaaatattatt 40608655  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  40608654 ttttctttaatgaaaaacaaacttatagttgattaggataatttggtaaaataa 40608601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 45301763 - 45301871
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||| || |||||| |||  ||||    
T  45301763 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccatcaattaatactgtg-tacactacttttaaag 45301861  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  45301862 tattactttt 45301871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 27964524 - 27964444
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27964524 tgtttcgaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat 27964444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 33055956 - 33056051
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||| | ||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  33055956 ttcaattaatactatat-acactactttcaatgtattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaataacat 33056051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 216 - 302
Target Start/End: Complemental strand, 34546232 - 34546145
Alignment:
Q  216 ttaatactatgttacactgcttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34546232 ttaataatatgttacactacttccaaaggattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaat 34546145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 4051859 - 4051750
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa-ctttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| |||||| | |||||||||||||| |||||| ||| ||||    
T  4051859 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataatttttttcttttcaattgtaccttccaattaatactatg-tacactactttcaaa 4051761  T
Q  243 gtattattttt 253  Q
    |||||| ||||    
T  4051760 gtattactttt 4051750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 17695980 - 17695872
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||| ||||||||||||||| |||||  ||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||    
T  17695980 ttgtttcaaaatgagtgtcactttcagtttccaatgtgataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaag 17695882  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  17695881 tattactttt 17695872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 22620489 - 22620381
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||  |  ||||| |||||||||    
T  22620489 ttgtttcaaaatgagtgtcgctttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactcag-gacactacttccaaag 22620391  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  22620390 tattactttt 22620381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 36177974 - 36178051
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  36177974 ttgtttcaaaatgaatgtcactttccgtttccaatgcaataataacttttttttttcaattgtacccttcaattaata 36178051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 307
Target Start/End: Complemental strand, 27726511 - 27726412
Alignment:
Q  205 gtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||||||||| ||| | ||| | |||||||| |||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27726511 gtacccttcaattaatagtatat-acattacttccaaattattatttttt--ttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataa 27726415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 35799201 - 35799350
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||||||||| ||||  ||||| ||| |||||    
T  35799201 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataacttttt-ttttcaattgtaccctccaattaatattatg-cacactactttcaaag 35799298  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  35799299 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 35799350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 4469499 - 4469576
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  4469499 ttgttttaaaatgaatttcactttcagttttcaatacaataataactttttcttttcaattgtacccttaaattaata 4469576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 11132548 - 11132708
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttc-ttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| || |||||| | | |||||||||  ||| |||||||||||||||  ||||||| |||| |||| |||||||||||| | ||| | ||| ||||    
T  11132548 ttgttttaacatgaattttattttcagtttcaaattcaataataacttttttattttcaattgtatcctttaattaatactatat-acattactttcaaa 11132646  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
     ||||||||||||||||||||||||||||  ||||||||||||  |||||||||||| ||||    
T  11132647 atattattttttctttaatgaaaaacaaacaaatagttgattataataatttggtaatataa 11132708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 11188644 - 11188545
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |||| | |||||||||| ||||  |||||| ||||||||||||    
T  11188644 tttcaaaatgaatgtcactttcagttttcaatgcaacaataacttatttttttcaattgtatcattcaattaatcctat-atacactacttccaaagtat 11188546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 15083307 - 15083157
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| ||| |||||| | ||||||||| ||||||||||||||| |||| ||||||| ||||| |||||||||||||||          |||| ||||    
T  15083307 ttgtttcgaaaagaatgttattttcagtttccaatgcaataataacattttattttcaattgtactcttcaattaatacta----------cttctaaag 15083218  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| ||||||||||||||||    ||||||||| ||||||| |||||||||||||||||||||    
T  15083217 tattatttttttctttaatgaa----aaatcaataattgattatgataatttggtaaaataacat 15083157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 220
Target Start/End: Complemental strand, 34546486 - 34546410
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaat 220  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| |||||||||| || |||||||||||||||||    
T  34546486 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataattttttcttttaaattgtacccttcaattaat 34546410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 7872866 - 7872772
Alignment:
Q  209 ccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||   | ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  7872866 ccttcaattaatactataa-atactactttcaaagtattattttttctttaatgaaaaacaaatcaatagtcgatcagaataatttggtaaaataa 7872772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 7644651 - 7644721
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||||||||| ||||||||||||||||||    
T  7644651 aaaatgaatgtcactttcagtattcaatataataataactttttcttttcaattgtacccttcaattaata 7644721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 19636587 - 19636664
Alignment:
Q  225 tgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||  || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  19636587 tgttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaat 19636664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 19835180 - 19835257
Alignment:
Q  225 tgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||  || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  19835180 tgttacactattttcaaagtattattttttctttaatgaaaaataaaccaatagttgattaggataatttgataaaat 19835257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 27964282 - 27964217
Alignment:
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  27964282 agtattattttttctttaatgaaaaacaaaccaatagttgattaaaataatttggtaaaataacat 27964217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 11188305 - 11188242
Alignment:
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  11188305 tattattttttctttaatgaaaaacaacccaatagttgattaggataacttggtaaaataacat 11188242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 14285939 - 14286014
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatac 222  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||| |||||||| ||||||||||    
T  14285939 tttcaaaatgaatgtcattttcagtttccaatacaataataacttttttttttcaattgtaccctccaattaatac 14286014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 16792481 - 16792544
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgta 207  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||    
T  16792481 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgta 16792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 145 - 253
Target Start/End: Original strand, 5717512 - 5717618
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| || |||| ||| ||||||||||| |   ||||| ||||||||||    
T  5717512 tgttttaaaatgaatgtcactttcagtttccaatgcaataataaatttttctttttaattgta-cctccaattaatactct-acacactacttccaaagt 5717609  T
Q  245 attattttt 253  Q
    |||| ||||    
T  5717610 attactttt 5717618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 28072565 - 28072718
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac---tttttcttttcaactgtacccttcaattaatactatgttacactgcttcca 240  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||   ||||| |||||||  ||| ||| ||||||||||| | | ||||| ||||||    
T  28072565 ttgttttaaaatgaatgtcactttcagttttcaatacaataataactttttttttttttcaatcgtatcctccaattaatactct-tcacactacttcca 28072663  T
Q  241 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    |||||||| ||||          ||||| ||||||||| | || |||||||||||||||||||||    
T  28072664 aagtattactttt----------aaaactaatcaatagctaataaggataatttggtaaaataac 28072718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 253
Target Start/End: Original strand, 45423618 - 45423724
Alignment:
Q  146 gtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagta 245  Q
    |||| ||||||| ||| | ||||||||| |||||||||||||||||||||||||||| | | ||||  |||||||||||||  ||||| |||||||||||    
T  45423618 gttttaaaatgattgttattttcagtttccaatgcaataataactttttcttttcaaatattccctcgaattaatactatg-cacactacttccaaagta 45423716  T
Q  246 ttattttt 253  Q
    ||| ||||    
T  45423717 ttagtttt 45423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 9391710 - 9391636
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||  |||| ||||||||    
T  9391710 tttcaaaatgaatgtcattttcagtttttaatgcaataataattttttcttttcaattgtgacctttaattaata 9391636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 17703017 - 17703071
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttt 198  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17703017 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttt 17703071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 7874791 - 7874720
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    ||||| |||||||||||  |||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  7874791 aaaattaatgtcactttt-gtttccaatgcaataataactttttcttttcaatcgtacccttcaattaatact 7874720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 294
Target Start/End: Original strand, 19469575 - 19469673
Alignment:
Q  197 tttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatttt--ttctttaatgaaaaacaaatcaatagttgattaggataattt 294  Q
    |||||| |||||| ||||||||||| ||| | ||| |  |||||||||||||||||  ||||||||||||||||||||||||| ||||||| ||||||||    
T  19469575 tttcaattgtaccattcaattaatattatat-acattagttccaaagtattattttttttctttaatgaaaaacaaatcaataattgattacgataattt 19469673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 10195572 - 10195642
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttca 214  Q
    |||||| ||||||||||| ||||| | ||||||||||||||||||| |||| ||||||| |||||||||||    
T  10195572 ttgttttaaaatgaatgttacttttaattttcaatgcaataataacattttattttcaattgtacccttca 10195642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 777768 - 777879
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac--tttttcttttcaactgtacccttcaattaatactat--gttacactgcttcc 239  Q
    |||||| ||||||||||||| ||||| |||  ||||||||||||||  ||||||| ||||| ||||||||||||| ||||||||    |||||| |||||    
T  777768 ttgttttaaaatgaatgtcattttcaatttctaatgcaataataaccttttttctgttcaaatgtacccttcaatcaatactattatatacactacttcc 777867  T
Q  240 aaagtattattt 251  Q
    ||| ||||||||    
T  777868 aaaatattattt 777879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 14833890 - 14833837
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttctt 197  Q
    |||||| ||||||||||||||||||| |||||||||||| ||||||||||||||    
T  14833890 ttgttttaaaatgaatgtcactttcaattttcaatgcaacaataactttttctt 14833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 35046516 - 35046593
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||| || |||||||||||||||| ||| |||||||||||||||||||  |||| || | ||||||||||||||||    
T  35046516 ttgttttaagatgaatgtcactttcaatttccaatgcaataataacttttaatttttaattatacccttcaattaata 35046593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 18717157 - 18717232
Alignment:
Q  227 ttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| |||  ||||| |||||| || |||||||||||||||| ||||| |||||||||||||||| |||||||    
T  18717157 ttacactacttttaaagttttatttattttttaatgaaaaacaaaccaataattgattaggataattttgtaaaat 18717232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 27986034 - 27986186
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac---tttttcttttcaactgtacccttcaattaatactatgttacactgcttcca 240  Q
    |||||| |||||||||||||||||||||||||||| |||||| |||   ||||| |||||||  ||| ||| ||||||||||| | | ||||| ||||||    
T  27986034 ttgttttaaaatgaatgtcactttcagttttcaatacaataa-aactttttttttttttcaatcgtatcctccaattaatactct-tcacactacttcca 27986131  T
Q  241 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    |||||||| ||||          ||||| ||||||||| | || |||||||||||||||||||||    
T  27986132 aagtattactttt----------aaaactaatcaatagctaataaggataatttggtaaaataac 27986186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 307
Target Start/End: Original strand, 34455793 - 34455852
Alignment:
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||| ||||  ||| || |||||||||||||||||||||||||| |||||    
T  34455793 attttttctttaataaaaattaaaccagtagttgattaggataatttggtaaaagaacat 34455852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 307
Target Start/End: Complemental strand, 14833794 - 14833752
Alignment:
Q  265 aaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  14833794 aaacaaaccaatagttgattgggataatttggtaaaataacat 14833752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 298
Target Start/End: Complemental strand, 27726592 - 27726542
Alignment:
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggta 298  Q
    ||||||| ||||||||||||||||  ||||||| |||||||||||||||||    
T  27726592 attttttttttaatgaaaaacaaactaatagttaattaggataatttggta 27726542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 307
Target Start/End: Complemental strand, 9391616 - 9391586
Alignment:
Q  277 agttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||||||    
T  9391616 agttgattaggataatttggtaaaataacat 9391586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 181
Target Start/End: Complemental strand, 34035895 - 34035865
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgca 181  Q
    |||||||||||||||||||||||||||||||    
T  34035895 aaaatgaatgtcactttcagttttcaatgca 34035865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 305
Target Start/End: Original strand, 29412113 - 29412142
Alignment:
Q  276 tagttgattaggataatttggtaaaataac 305  Q
    ||||||||||||||||||||||||||||||    
T  29412113 tagttgattaggataatttggtaaaataac 29412142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 32254591 - 32254639
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttt 193  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||| ||||    
T  32254591 ttgtttcaaaatgaa-gtcactttcagtttccaatgaaataataattttt 32254639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 34455011 - 34455064
Alignment:
Q  167 tcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaat 220  Q
    |||||||||||| ||||| ||| ||||| ||||||| |||| ||||||||||||    
T  34455011 tcagttttcaatacaatactaattttttattttcaattgtatccttcaattaat 34455064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 9366274 - 9366230
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 188  Q
    |||||| ||||| ||||||||||| ||||||||||| ||||||||    
T  9366274 ttgttttaaaataaatgtcactttaagttttcaatgaaataataa 9366230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 2729941 - 2729783
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  2729941 ttgtttcaaaatgaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacccttcaattaaaactatgttacactacttccaaag 2729842  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2729841 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 2729783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 34446182 - 34446024
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  34446182 ttgtttcaaaatgaatgtcattttcagttttcaatacaataataacattttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 34446083  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34446082 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 34446024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 39566181 - 39566339
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||    
T  39566181 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaataatatgttacactacttccaaag 39566280  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39566281 tattattttctctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 39566339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 42104218 - 42104060
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| |    
T  42104218 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattttacccttcaattaatactatgttacactacttccaagg 42104119  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  42104118 tattattttttctttaatgaaaaacaagtcaatagttgattaggataatttggtaaaat 42104060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 6518974 - 6519133
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  6518974 ttgtttcaaaatgaatgtcgctttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 6519073  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6519074 tattatttttttctttaatgaaaaacaaatcaatagttgattaggataatttgataaaat 6519133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 3306157 - 3306006
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||    
T  3306157 aaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactctgttacactacttccaaagtattatt 3306058  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3306057 ttttctttaatgaaaaacaaatcaatagttgattaagataatttggtaaaat 3306006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 14620646 - 14620491
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||||||    
T  14620646 tttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacctttcaattaatattatgttacactacttccaaagtat 14620547  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||||||||| ||||||    
T  14620546 tattttttctttgatgaaaaacaaaccaataattgattaagataatttgataaaat 14620491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 26660753 - 26660910
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| | ||    
T  26660753 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagag 26660852  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  26660853 tatta-tttttctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaat 26660910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 26932346 - 26932503
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| | ||    
T  26932346 ttgttttaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttatactacttctagag 26932445  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| |||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  26932446 tatta-tttttctttaatgaaaaacaaaccaatagttgattaagagaatttggtaaaat 26932503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 36164892 - 36165047
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||| | |||||||||||||||||||| | ||| | |||||||| |||||||    
T  36164892 aaaatgaatgtcattttcagtttccaatgcagtaataactttttcttttcaattatacccttcaattaatactatat-acattacttccaaaatattatt 36164990  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36164991 ttttctttaataaaaaacaaatcaatagttgattaggataatttggtaaaataacat 36165047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 8336561 - 8336404
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    |||||||||||||||||||| || ||||||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||| |||||||| |||    
T  8336561 tttcaaaatgaatgtcacttccatttttcaatgcaataataacttctttttttcaattgtactcttcaattaatactatgttacactacttccaaaatat 8336462  T
Q  247 tatt--ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||  ||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  8336461 tattttttttctttaataaaaaacaaaccaatagttgattaggataatttggtaaaat 8336404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 21319465 - 21319309
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| | ||||||     
T  21319465 ttgtttcaaaatgaatgtcactttcagcttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactac-tccaaaa 21319367  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21319366 ta-tatattttttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 21319309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 42662087 - 42661937
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||| | ||| ||||||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  42662087 aaaatgaatgttatttttagttttcaatgtaataataatttttt-ttttcaattgtacccttcaattaatactatgttacactacttccaaagtattatt 42661989  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  42661988 ttttctttaataaaaaacaaactaatagttgattaggataatttggtaaaat 42661937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 165 - 303
Target Start/End: Original strand, 14005911 - 14006049
Alignment:
Q  165 tttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaa 264  Q
    ||||||||| ||||||||||||||||||||||||| || | || ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  14005911 tttcagtttccaatgcaataataactttttctttttaattttatccttcaattaatactatgttacactacttccaaggtattattttttctttaatgaa 14006010  T
Q  265 aaacaaatcaatagttgattaggataatttggtaaaata 303  Q
    ||||||| ||||| |||||||||||||||||||||||||    
T  14006011 aaacaaaccaatatttgattaggataatttggtaaaata 14006049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 27797786 - 27797938
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||   || | | |||||||||||||| |    
T  27797786 aaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcagttaatacta---tatattacttccaaagtatta-t 27797881  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  27797882 ttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaataacat 27797938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 145 - 305
Target Start/End: Complemental strand, 15167164 - 15167006
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||||||||| |||||| | ||||| |||||||| |    
T  15167164 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-ttttcaattttactcttcaattattactatat-acactacttccaaaat 15167067  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    |||||||||||||||||||||||  || |||||||||| ||||||||||||||||||||||    
T  15167066 attattttttctttaatgaaaaattaaccaatagttgactaggataatttggtaaaataac 15167006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 307
Target Start/End: Original strand, 11977590 - 11977748
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    ||||||| |||||||||||||||||| |||| | ||||||||||||||||||||| |||| |||| |||||||| ||| | ||||| |||||||||||||    
T  11977590 ttcaaaacgaatgtcactttcagtttccaataccataataactttttcttttcaattgtatcctttaattaatattatat-acactacttccaaagtatt 11977688  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||    
T  11977689 attttttctttaatgaacaacaaaccaatagttgattaggataatttggtaaaacaacat 11977748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 21375839 - 21375647
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||||||||||||||         |||||| ||||| |||||||||||||||||||||||||| |||   ||||| ||||||| |||||||    
T  21375839 gtttcaaaatgagtgtcgttttagccaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaaaaattttttttttttttcaattgtaccc 21375740  T
Q  211 ttcaattaatactatgttacactgcttccaaagtatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| ||| ||||||| || |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  21375739 ttcaattaatactatgttacactactttcaaagtaatatttttttctttaatgaaaaacaaacaaataggtgattaggataatttggtaaaat 21375647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 304
Target Start/End: Original strand, 34534365 - 34534516
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    |||||||||||||||||||  || |||||||||||||| ||||| |||||||| |||||||||||||||||||||||  ||||| |||||||| ||||||    
T  34534365 aaaatgaatgtcactttca--ttccaatgcaataataatttttttcttttcaattgtacccttcaattaatactatgc-acactacttccaaaatattat 34534461  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  34534462 tttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataa 34534516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 13761555 - 13761668
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  13761555 ttgtttcaaaatgaatgtcactttcacttttcaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttccaaag 13761654  T
Q  244 tattattttttctt 257  Q
    ||||||||||||||    
T  13761655 tattattttttctt 13761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 182 - 302
Target Start/End: Complemental strand, 39335321 - 39335200
Alignment:
Q  182 ataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta-ttttttctttaatgaaaaacaaatcaatagtt 280  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  39335321 ataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtgttatttttttctttaatgaaaaacaaaccaatagtt 39335222  T
Q  281 gattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||    
T  39335221 gattaggataatttggtaaaat 39335200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 39504720 - 39504881
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaat-aataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||| |||| |||||||| ||||||||||| ||||||||    
T  39504720 ttgttttaaaatgaatgtcactttcagtttccaatgcaattaataactttttcttttcaattgtatcctttaattaatattatgttacactacttccaaa 39504819  T
Q  243 gtatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     |||||  ||||||||||| |||||||||||  ||||||||||||| |||||||||||||||    
T  39504820 atattattttttttctttattgaaaaacaaactaatagttgattagaataatttggtaaaat 39504881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 29807465 - 29807311
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataata--actttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta 248  Q
    ||||||||||| ||||| |||||  ||||||||||||  ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||    
T  29807465 aaaatgaatgttactttgagtttctaatgcaataatataactttttcttttcaattgtaccattcaattaatactatgttacactacttccaaaatatta 29807366  T
Q  249 tt-ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || ||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  29807365 tttttttctttagtaaaaaacaaaccaatagttgattaggataatttggtaaaat 29807311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 843019 - 843178
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| |||||||||||||||||||||| |||||||||||   ||||| |||||||| |||||| ||||||||||| | | | ||||| |||| ||||    
T  843019 ttgtttcgaaatgaatgtcactttcagtttgcaatgcaataa---cttttccttttcaattgtaccattcaattaatattgtat-acactacttcaaaag 843114  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  843115 tgttattttttctttaatgagaaacaaaccaatagttgattaggataatttggtaaaataacat 843178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 4424975 - 4425130
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||| |||||||| |||||||||  || ||||   |||||||||||| |||||| ||||||||||||||| ||||||| |||||||||    
T  4424975 ttgttttaaaataaatatcactttcggttttcaataaaacaata---ttttcttttcaattgtacctttcaattaatactatattacactacttccaaag 4425071  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  4425072 tattattttttctttaatgaaaaacaaatcgatagatgattaagataatttggtaaaat 4425130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 38362291 - 38362130
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | ||||| | |||||||||| |  || ||| |||  |||||    
T  38362291 tgtttcaaaatgaatgtcactttcaattttcaatgcaataataacttttccttttcaattatacccataaattaatact-ttatatactacttttaaagt 38362193  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||| ||||| ||| |||||||| ||||||||||||| ||||||||||||    
T  38362192 attattttttctttaataaaaaataaaacaatagttaattaggataatttagtaaaataacat 38362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 38369871 - 38370032
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| ||||||| | ||| ||||||||||||||||||||||||| || ||||| |||||||||||| ||| | ||||| ||| |||||    
T  38369871 ttgttttaaaatgaatatcactttta-tttccaatgcaataataactttttcttttaaattgtactcttcaattaatattatat-acactactttcaaag 38369968  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||  |||||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  38369969 tattatttttttattaatgaaaaacgaacaaatagttgattaggataatttggtaaaataacat 38370032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 147 - 302
Target Start/End: Original strand, 39729960 - 39730102
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||             ||||||||||||||||||| |||||||| |||    
T  39729960 tttcaaaatgaatgttattttcagtttccaatgcaataataactttttcttttca-------------attaatactatgttacactacttccaaaatat 39730046  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  39730047 tattttttctttaatgaaaaacaaacgaatagttgattaggataatttggtaaaat 39730102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 116 - 307
Target Start/End: Original strand, 7721066 - 7721255
Alignment:
Q  116 aaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaa 215  Q
    |||||||||||||||||| ||       |||||||||||||||| |||||||  ||||||||||||||||||||||||| ||||||| |||| | |||||    
T  7721066 aaaatgagtgtcgttttaattaaaaaaattgtttcaaaatgaatatcactttatgttttcaatgcaataataacttttt-ttttcaattgtatcattcaa 7721164  T
Q  216 ttaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | |||| ||| | ||| | ||| |||||||||||||||||||||| || ||||||| ||||| ||||||||||||||||| |||||||||||    
T  7721165 tcaatattatat-acattactttcaaagtattattttttctttaaagacaaacaaaccaataattgattaggataatttgttaaaataacat 7721255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 164 - 302
Target Start/End: Original strand, 27600417 - 27600550
Alignment:
Q  164 ctttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatga 263  Q
    |||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||  || | |||||     |||| ||||||||    
T  27600417 ctttcagtttccaatgcaataataactttttcttttcaattatacccttcaattaatactatattacactattttcgaagta-----ttttttttaatga 27600511  T
Q  264 aaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27600512 aaaacaaatcaatagttgattaggataatttggtaaaat 27600550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 42978254 - 42978070
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| ||||||||||||||||||| |        ||||| ||||||||| |||||||||||||||||||||||||||||   |  ||       ||||      
T  42978254 gttttaaaatgagtgtcgttttagctaaaaaaaatgttttaaaatgaatatcactttcagttttcaatgcaataataaccaatagtt-------gtacta 42978162  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42978161 ttcaattaatactatgttacactacttacatagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 42978070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 10345087 - 10344979
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||    
T  10345087 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaag 10344989  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  10344988 tattactttt 10344979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 14162049 - 14161893
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaact-gtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    ||||| ||||||| |||  ||||  ||||||||||||| ||||||||||||| | ||||| ||||||||||||||| | ||||| |||||||||||||||    
T  14162049 aaaataaatgtcattttaggtttctaatgcaataataattttttcttttcaatttgtaccattcaattaatactatat-acactacttccaaagtattat 14161951  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| ||| || |||||| ||| ||||||||| |||||||||||    
T  14161950 tttttctttaatgaaaaataaaccagtagttgtttatgataatttgataaaataacat 14161893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 266
Target Start/End: Complemental strand, 34209052 - 34208926
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaat---gcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttcca 240  Q
    |||||||||||||||||||||||||||||| ||||   |||||||||||||||| ||||||| | |||||||||||||||| ||| ||||||| ||||||    
T  34209052 ttgtttcaaaatgaatgtcactttcagtttccaataatgcaataataacttttttttttcaattatacccttcaattaatattatattacactacttcca 34208953  T
Q  241 aagtattatt-ttttctttaatgaaaa 266  Q
    || ||||||| ||||||||||||||||    
T  34208952 aaatattatttttttctttaatgaaaa 34208926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 176 - 307
Target Start/End: Complemental strand, 1309481 - 1309351
Alignment:
Q  176 aatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaa 275  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||| ||| | ||||| ||| |||  |||||||||||||||||||| |||||||||||    
T  1309481 aatgcaataataattttttctttttaagtgtacctttcaattaatattatat-acactacttacaacatattattttttctttaatgataaacaaatcaa 1309383  T
Q  276 tagttgattaggataatttggtaaaataacat 307  Q
    | |||||||| ||||||||| |||||||||||    
T  1309382 ttgttgattatgataatttgataaaataacat 1309351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 7317026 - 7317105
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  7317026 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 7317105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 3025086 - 3024978
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||| | |||||||||    
T  3025086 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacattacttccaaag 3024988  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  3024987 tattactttt 3024978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 13974282 - 13974433
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta-t 249  Q
    ||||||||||||||||| ||    |||||||||||||| ||| ||||||||| |||||| |||||||| || ||| | |  || |||||||| ||||| |    
T  13974282 aaaatgaatgtcacttttag----caatgcaataataattttatcttttcaattgtaccattcaattattattatat-atgctacttccaaaatattact 13974376  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  13974377 tttttctttaatggaaaacaaacaaatagttgattaggataatttggtaaaataaca 13974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 302
Target Start/End: Complemental strand, 34972775 - 34972647
Alignment:
Q  166 ttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaa 265  Q
    |||| ||| |||||||||||||| ||||| |||| || |||||| |||||| |||| ||||||        |||||||||||||| |||||||||| |||    
T  34972775 ttcaatttccaatgcaataataattttttatttttaattgtaccattcaatgaatattatgtt--------tccaaagtattattctttctttaataaaa 34972684  T
Q  266 aacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34972683 aacaaattaatagttgattaggataatttggtaaaat 34972647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 35766051 - 35765976
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||||    
T  35766051 ttcaaaatgaatgtcactttcagttttcaatacaataataactttttcttttcaattgtaccgtccaattaatact 35765976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 7580062 - 7579947
Alignment:
Q  106 catttgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactg 205  Q
    |||| |||| |||| |||||||||||||||        |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||    
T  7580062 cattcgttttaaaacgagtgtcgttttagtcaaaataattgttttaaaatgaatgttactttcagttttcaatacaataataactttttcttttcaattg 7579963  T
Q  206 tacccttcaattaata 221  Q
    ||| ||||||||||||    
T  7579962 tactcttcaattaata 7579947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 4911187 - 4911110
Alignment:
Q  228 tacactgcttccaaagtattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4911187 tacactactttcaaagtattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataa 4911110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 25362955 - 25362847
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||| |||||||||||  ||||||||||| ||||||||||||||| | |||||| ||||||||||| ||  ||||| |||||||||    
T  25362955 ttgtttcaaaatgaatgttactttcagtttcgaatgcaataatgactttttcttttcaattttaccctccaattaatactctg-cacactacttccaaag 25362857  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  25362856 tattactttt 25362847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 306
Target Start/End: Complemental strand, 7749034 - 7748891
Alignment:
Q  162 cactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaat 261  Q
    |||||||||||||||||| |||||||||  | | |||| || |||| | || |||||||||||| | |||   ||| |||||||||||||||||||||||    
T  7749034 cactttcagttttcaatgtaataataaccgtatatttttaattgtatcatttaattaatactatat-acataactttcaaagtattattttttctttaat 7748936  T
Q  262 gaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    |||||||||| ||||| || ||||| |||||||||||| ||||||    
T  7748935 gaaaaacaaaccaataattaattagaataatttggtaatataaca 7748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 190 - 307
Target Start/End: Complemental strand, 28591735 - 28591615
Alignment:
Q  190 tttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttg----atta 285  Q
    ||||||||||||| |||||| || |||||||||||| | |||||  ||  |||  |||||||||||||||||||||||||||||||||||||    ||||    
T  28591735 tttttcttttcaattgtaccttttaattaatactatat-acactatttttaaaaaattattttttctttaatgaaaaacaaatcaatagttgattaatta 28591637  T
Q  286 ggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||    
T  28591636 ggataatttggtaaaataacat 28591615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 7736455 - 7736534
Alignment:
Q  228 tacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||    
T  7736455 tacactactttcaaagtattattttttctttaatgaaaaacgaactaatagttgattaggataatatggtaaaataacat 7736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 4630870 - 4630971
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||| |   ||||| |||||||||||||| |    
T  4630870 aaaataaatgtcactttcagttttcaatacaataataactttttcttttcaattgtatcctccaattaatact-ttacacactacttccaaagtattact 4630968  T
Q  251 ttt 253  Q
    |||    
T  4630969 ttt 4630971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 21195380 - 21195458
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    ||||||||||| ||||| ||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21195380 tttcaaaatgattgtcaatttaagtttccaatgcaataataattttttcttttcaattgtacccttcaattaatactat 21195458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 4911305 - 4911228
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||||||||| ||||||||||| ||||| ||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  4911305 ttgtttcaaaataaatgtcacttttagtttccaatgtaataatacctttttcttttcaactgtacccttcaatcaata 4911228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 43584532 - 43584423
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataact-ttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||  ||||| ||||||||    
T  43584532 ttgttttaaaatgaatgtcgttttcagttttcaatgcaataataacttttttcttttcaattataccctccaattaatactctg-cacactacttccaaa 43584434  T
Q  243 gtattattttt 253  Q
     ||||| ||||    
T  43584433 atattactttt 43584423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 7579643 - 7579586
Alignment:
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7579643 tttttctttaatgaaaaacaaatcaatagttgattaggataatttgaaaaaataacat 7579586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 9066578 - 9066501
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||  |||| | |||||||||||    
T  9066578 ttgtttcaaaatgaatgttactttcagttttcaatgcaataataaaattttcttttcatttgtagcattcaattaata 9066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 36073785 - 36073708
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  36073785 ttgtttctaaatgaatgtcattttaaattttcaatgcaataataactttttcttttcaattgtatcattcaattaata 36073708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 21634177 - 21634271
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||| | ||||| |||||||| ||||||||| |||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||    
T  21634177 ttcaattaatattatat-acactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaataacat 21634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 21642424 - 21642518
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||| | ||||| |||||||| ||||||||| |||||||||||||||||| ||||| ||||||| |||| ||||||||||||||||    
T  21642424 ttcaattaatattatat-acactacttccaaaatattatttt-tctttaatgaaaaacaaaccaataattgattatgatactttggtaaaataacat 21642518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 24280991 - 24281055
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtac 208  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  24280991 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24281055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 144 - 208
Target Start/End: Complemental strand, 24381221 - 24381157
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtac 208  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  24381221 ttgtttcaaaatgaatgtcacttttagtttccaatgcaataataattttttcttttcaattgtac 24381157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 307
Target Start/End: Original strand, 24281102 - 24281260
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||| ||||||| |||||| |||||| |||||| |||||| |||||| |||||  || ||||||||||||   ||| | ||| ||||||||||||    
T  24281102 aaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgtacattt-aattaatactatac-acaatactttcaaagtattatt 24281199  T
Q  251 ttttctttaatg----aaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||| |    | |||||||| ||| ||||||||| |||||||| |||||||||||    
T  24281200 ttttctttaacgagaaagaaacaaattaatggttgattagaataatttgataaaataacat 24281260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 24381109 - 24380951
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||| ||||||| |||||| |||||| |||||| |||||| |||||| |||||  || ||||||||||||   ||| | ||| ||||||||||||    
T  24381109 aaaatgaatatcacttttagtttttaatgcactaataattttttcatttcaattgtacattt-aattaatactatac-acaatactttcaaagtattatt 24381012  T
Q  251 ttttctttaatg----aaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||| |    | |||||||| ||| ||||||||| |||||||| |||||||||||    
T  24381011 ttttctttaacgagaaagaaacaaattaatggttgattagaataatttgataaaataacat 24380951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 303
Target Start/End: Original strand, 41645292 - 41645392
Alignment:
Q  198 ttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggt 297  Q
    ||||| |||||||||||||||||||||| | ||||| |    ||||||||||||| |||||||||||||||||| |||| ||||||||  |||||||| |    
T  41645292 ttcaattgtacccttcaattaatactatat-acactaca---aaagtattatttt-tctttaatgaaaaacaaaccaatggttgattaaaataatttgat 41645386  T
Q  298 aaaata 303  Q
    ||||||    
T  41645387 aaaata 41645392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 302
Target Start/End: Original strand, 13761823 - 13761876
Alignment:
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||| |||||||    
T  13761823 ttttttctttaatgaaaaataaaccaatagttgattaagataattttgtaaaat 13761876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 891154 - 891091
Alignment:
Q  159 tgtcactttcagttttcaatgcaataataactttttc-ttttcaactgtacccttcaattaata 221  Q
    ||||||||||| ||||||||| |||||||| |||||| ||||||| |||||| |||||||||||    
T  891154 tgtcactttcacttttcaatgtaataataattttttctttttcaattgtaccattcaattaata 891091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 40776720 - 40776653
Alignment:
Q  155 tgaatgtcactttcagttttcaatgcaataataact-ttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||||||| ||||||||| |||||||||| |||| ||| ||| |||||||| |||||||||    
T  40776720 tgaatgtcactttcatttttcaatgtaataataacttttttatttccaattgtaccctccaattaata 40776653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 25768580 - 25768511
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    |||||| |||||||||||||||||||||| |||| |||| ||||||||| || |||| ||| |||||||||    
T  25768580 aaaatggatgtcactttcagttttcaatgtaatattaac-ttttctttttaattgtatcctccaattaata 25768511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 11195175 - 11195235
Alignment:
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| ||||||||||||||||  |||| || | || |||||||||||||||||||||    
T  11195175 tattttttttttaatgaaaaacaaactaataattaaataagataatttggtaaaataacat 11195235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 32158589 - 32158637
Alignment:
Q  175 caatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||| ||||||||||||||| ||||||| |||||||| |||||||||||    
T  32158589 caatacaataataacttttttttttcaattgtaccctccaattaatact 32158637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 189
Target Start/End: Original strand, 31041932 - 31041970
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataac 189  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  31041932 aaaatgattgtcactttcagtttccaatgcaataataac 31041970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 7317135 - 7317176
Alignment:
Q  264 aaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||||||||| || |||||||||||||||||||||    
T  7317135 aaaactaatcaatagttaataaggataatttggtaaaataac 7317176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 39804203 - 39804166
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgca 181  Q
    |||||||||||||||| ||||||||||||| |||||||    
T  39804203 ttgtttcaaaatgaatatcactttcagtttccaatgca 39804166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 224
Target Start/End: Complemental strand, 2329152 - 2329097
Alignment:
Q  171 ttttcaatgcaataataac--tttttcttttcaactgtacccttcaattaatacta 224  Q
    |||||||||||||| |||   ||||| ||||||||||||||||| |||||||||||    
T  2329152 ttttcaatgcaatattaatatttttttttttcaactgtaccctttaattaatacta 2329097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 2e-70; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 111 - 302
Target Start/End: Original strand, 38016340 - 38016530
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||     
T  38016340 gtttcaaaatgagtgtcgttttagccaaagaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc- 38016438  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  38016439 ttcaattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattaggataatttggtaaaat 38016530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 51398008 - 51398166
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  51398008 ttgtttcaaaataaatgtcacttttagttttcaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 51398107  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51398108 tattattttttctttaatgaaaaataaatcaatagttgattaggataatttggtaaaat 51398166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 110 - 302
Target Start/End: Original strand, 30431084 - 30431276
Alignment:
Q  110 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    |||||||||||||||||||||||||         || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |    
T  30431084 tgtttcaaaatgagtgtcgttttagccaaaaaaattatttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtaac 30431183  T
Q  210 cttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||| ||| ||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  30431184 cttcaattaatattatattacactacttccaaagtattattttttctctaatgaaaaacaagtcaatagttgattaggataatttggtaaaat 30431276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 44676219 - 44676377
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||||||||||| |||||||||  ||||||||    
T  44676219 ttgtttcaaaatgaatgtcactttcagtttccaatgcaatgataactttttcttttcaattgtaccctccaattaatactgtgttacactagttccaaag 44676318  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  44676319 tattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 44676377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 47895496 - 47895338
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||||||    
T  47895496 ttgtttcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattatacccttcaattaatactatgttacactatttccaaag 47895397  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  47895396 tattattttttctttaatgaaaagcaaacaaatagttgattaggataatttggtaaaat 47895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 45213906 - 45213716
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| |||||||||||||||||||||       |||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  45213906 gttttaaaatgagtgtcgttttagttaaaaaa-ttgttttaaaatgaatgtcactttcagtttctaatgcaataataactttttcttttcaattgtaccc 45213808  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  45213807 ttcaattaatactatattacactactttcaaagtattattttttctttaatgaaaagcaaaccaatagttgattagaataatttggtaaaat 45213716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 11393543 - 11393701
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||    
T  11393543 ttgttttaaaatgaatgtcattttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatacaatgttacactacttccaaag 11393642  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  11393643 tattattttttctttaattaataacaaatcaatagttgattaggataatttgataaaat 11393701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 33194183 - 33194025
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||||| |||| || |||||||||||||||||| ||||||||| | |||||||||    
T  33194183 ttgttttaaaatgaatgtcactttcagtttccaatgcaatgataactttttatttttaattgtacccttcaattaatattatgttacattacttccaaag 33194084  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33194083 tattattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 33194025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 145 - 302
Target Start/End: Original strand, 36460805 - 36460961
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||| ||| ||||||||||    
T  36460805 tgtttcaaaatgaatatcactttcagttttcaatgcaataataactttttcttttcaattgcacccttcaattaatattatgttatactacttccaaagt 36460904  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36460905 atta-tttttctttgatgaaaaacaaaccaatagttgattaggataatttggtaaaat 36460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 3152958 - 3152801
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  3152958 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaaa 3152859  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| | ||||||||||| ||||||||| ||||| |||||||| |||||| ||||||||    
T  3152858 tattttattttctttaat-aaaaacaaaccaataattgattagaataattgggtaaaat 3152801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 144 - 300
Target Start/End: Complemental strand, 50088468 - 50088312
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||| |||||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  50088468 ttgttttaaaatgaacgtcacttttagtttccaatgcaatagtaactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 50088369  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaa 300  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  50088368 tattaatttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaa 50088312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 30426476 - 30426317
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||     
T  30426476 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttctttttaattgtacccttcaattaatactatgttacactacttccaaaa 30426377  T
Q  244 ta-ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || || ||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||    
T  30426376 tattttttttttcttcaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 30426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 32492364 - 32492176
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||||||||||||||         |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||     
T  32492364 gtttcaaaatgagtgtcgttttag--gcaaaaattgtttcaaaatgaatgtcactttcaattttcaatgcaataataactttttcttttcaattatacca 32492267  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||| ||||||||| |||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  32492266 ttcaattaatactttgttacactacttccaaaatattattttttctttaat-aaaaaaaaatcaataattgattaggataatttgataaaat 32492176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 30315307 - 30315470
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa- 242  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| || | |||||||||||||||||||| | ||||| ||| ||||     
T  30315307 ttgtttcaaaatgaatgtcactttccgtttccaatgcaagaataactttttcttttgaattatacccttcaattaatactatat-acactactttcaaaa 30315405  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30315406 gtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 30315470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 144 - 304
Target Start/End: Complemental strand, 36844894 - 36844735
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| |||| | ||||||||||| ||| | ||||| |||||||||    
T  36844894 ttgtttcaaaaccaatgtcactttcagttttcaatgcaataataattttttcttttcaattgtatcattcaattaatattatat-acactacttccaaag 36844796  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  36844795 tattatgttttctttaatgaaaaactaatcaatagttgattaggataatttggtaaaataa 36844735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 2458005 - 2458164
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || | |||||||||||||||||||| ||||||| |||||||||    
T  2458005 ttgtttcaaaatgaatgtcactttcagtttccaatacaataataactttttctttttaattatacccttcaattaatactatattacactacttccaaag 2458104  T
Q  244 tatt-attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||  ||||||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  2458105 tattgtttttttctttaatgaaaattaaaccaatagttgattaggataatttggtaaaat 2458164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 19373584 - 19373746
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||| ||||||||||| ||||||||| |||||||||||||| ||||||| ||||||||||||||||||  || | ||||| |||||||||    
T  19373584 ttgtttcaaaatgactgtcactttcaattttcaatgaaataataactttttattttcaattgtacccttcaattaatatcatat-acactacttccaaag 19373682  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19373683 ttttattttttctttaatgaaaaacaaaccaatagttgattaggagaatttggtaaaataacat 19373746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 23525468 - 23525310
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||| |||||   ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  23525468 ttgttttaaaataaatgttacttttgatttccaatgcaataataagtttttcttttcaactatacccttcaattaatactatgttacattacttccaaag 23525369  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  23525368 tattattttttctttaatgaaaaacaaaccaatagttgattatgataatttggtaaaat 23525310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 146 - 302
Target Start/End: Original strand, 38363785 - 38363947
Alignment:
Q  146 gtttcaaaatgaatgtcactttcagttttcaatgcaataataac------tttttcttttcaactgtacccttcaattaatactatgttacactgcttcc 239  Q
    |||||||||||||||||||||||||||| |||||||||||||||      ||||| ||||||| ||||||||||||||||||||| |||||||| |||||    
T  38363785 gtttcaaaatgaatgtcactttcagtttacaatgcaataataacctttttttttttttttcaattgtacccttcaattaatactacgttacactacttcc 38363884  T
Q  240 aaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||    
T  38363885 aaagtattattttttctttaatgaaaaacaaaccaacggtttattaggataatttggtaaaat 38363947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 41287651 - 41287490
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaata---ataactttttcttttcaactgtacccttcaattaatactatgttacactgcttcca 240  Q
    ||||||||||||||||||||||||| |||| || |||||||   |||||||||||||||||| | |||||||||||||||| ||||||||| | ||||||    
T  41287651 ttgtttcaaaatgaatgtcactttcggtttccagtgcaatactaataactttttcttttcaattatacccttcaattaatattatgttacattacttcca 41287552  T
Q  241 aagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  41287551 aagtatttttttttctttaatgaaaaagaaaccaatagttgattaggataatttggtaaaat 41287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 31853714 - 31853556
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||| ||||| || | ||||||||| ||||||||||  | |||||||||||||||||||||||||||||| ||| |||||    
T  31853714 ttgtttcaaaataaatgtcacttttagtttccagtacaataataattttttcttttttattgtacccttcaattaatactatgttacactactttcaaag 31853615  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  31853614 tattattttttctttaatgaaagacaaaccaatagttgattaggataatttgataaaat 31853556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 53200832 - 53200675
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||| ||||||||||| ||| |||||    
T  53200832 ttgttttaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaca-ttcaattaatattatgttacactactttcaaag 53200734  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || ||||||||| |||||||||| ||||  |||||||||||||||||||||||||||||    
T  53200733 tactattttttccttaatgaaaagcaaactaatagttgattaggataatttggtaaaat 53200675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 47137961 - 47138121
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||| | ||||||||     
T  47137961 ttgttttaaaatgaatgtcatttttagttttcaatgcaataataactttttattttcaattgtacccttcaaataatactatgttacagtacttccaaaa 47138060  T
Q  244 tatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||  |||||||||||||||||||||||  |||| ||||||||||||||||||||||||    
T  47138061 tattattttttttctttaatgaaaaacaaacgaataattgattaggataatttggtaaaat 47138121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 33024445 - 33024294
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| || ||| ||||||||||| ||||||||||||||| ||| ||||||||    
T  33024445 aaaatgaatgttactttcagtttccaatgcaataataactttatcttttcaattgcaccattcaattaatattatgttacactgctttcaacgtattatt 33024346  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    | |||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  33024345 tcttctttaatggaaaacaaatcaatagttgattaagataatttgataaaat 33024294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 149 - 280
Target Start/End: Complemental strand, 36729957 - 36729826
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta 248  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| | ||||||||||||||    
T  36729957 tcaaaatgaatgtcactttcaatttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacattacttccaaagtatta 36729858  T
Q  249 ttttttctttaatgaaaaacaaatcaatagtt 280  Q
    |||||| |||||||||||||||| ||||||||    
T  36729857 ttttttatttaatgaaaaacaaaccaatagtt 36729826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 42071983 - 42072145
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||| |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||| | |||| ||||    
T  42071983 ttgttttaaaatggatgtcatttttagtttccaatgcaataataactttttcttttcaactgtacccttcaattaatattat-atacattacttctaaag 42072081  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||| |||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||    
T  42072082 tattatgttttctttaatggaaaacaaatcaatagttgattatgataatttagtaaaataacat 42072145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 144 - 290
Target Start/End: Complemental strand, 35557910 - 35557764
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||  || ||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| |||||||||    
T  35557910 ttgttttaaaatatatatcactttcagtttccaatgcaataataattttttcttttcaattgtacctttcaattattactatgttacactacttccaaag 35557811  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggata 290  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  35557810 tattattttttctttaatgaaaaataaaccaatagttgattaggata 35557764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 145 - 307
Target Start/End: Original strand, 38140949 - 38141110
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||  | ||| |||||||||||||||||| | ||||| |||||||| |    
T  38140949 tgtttcaaaatgaatgtcactttcagtttccaatgcaataataaccttttttttttcattgtgcccttcaattaatactatat-acactacttccaaaat 38141047  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    || |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  38141048 ataattttttctttaatgaaaaacaaaccaataattgattagaataatttggtaaaataacat 38141110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 9189580 - 9189425
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| | || | |||||||||||||||  |||| | |||||||| |||||||    
T  9189580 aaaatgaatgtcactttcagttttcaatgaaataataactttttcttttcaaatatatcattcaattaatactat-atacattacttccaaaatattatt 9189482  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||||||||| ||||||||||||| ||| |||||||||||||||||    
T  9189481 ttttctttaataaaaaacaaaccaatagttgattacgatgatttggtaaaataacat 9189425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 144 - 304
Target Start/End: Original strand, 48903284 - 48903443
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||  || || ||    
T  48903284 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactat-atacactaatttcatag 48903382  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||| ||||||||| |||||||||||||  |||||||| ||||||||    
T  48903383 tattattttttctttaattaaaaacaaagcaatagttgattaaaataatttgataaaataa 48903443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 40487829 - 40487988
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||||||| |||||| |||||||||||||||  |||||| |||| |||||||    
T  40487829 tttcaaaatgaatgtcacttttgatttccaatgcaataataactttttcttttcaattgtacctttcaattaatactat-atacactacttctaaagtat 40487927  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||  ||||||||||| ||||||||||||  |||||||| |||||||||||    
T  40487928 tattttttctttatcgaaaaacaaattaatagttgattataataatttgataaaataacat 40487988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 30934958 - 30934799
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||   ||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||| | ||||| |||| ||||    
T  30934958 ttgttttaaaatgaatgtca---tcagtttccaatgcaataataattttttcttttcaattgtacccctcaattaatactatat-acactacttctaaag 30934863  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  30934862 tattattttatctttaatgaaaaacaaaccaatatttgattatgataatttgataaaataacat 30934799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 285
Target Start/End: Original strand, 48901718 - 48901858
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||  || || ||    
T  48901718 ttgtttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactat-atacactaatttcatag 48901816  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgatta 285  Q
    |||||||||||||||||| ||||||||| |||||||||||||    
T  48901817 tattattttttctttaattaaaaacaaagcaatagttgatta 48901858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 41850388 - 41850537
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||           
T  41850388 ttgttttaaaatgaatgacacttttagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatattatgttacactact------- 41850480  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  41850481 tatt-ttttttctttaatg-aaaacaaaccaatagttgattaggataatttggtaaaat 41850537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 302
Target Start/End: Original strand, 45566824 - 45566955
Alignment:
Q  171 ttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaa 270  Q
    |||||||| ||||||||||||||||||||||| |||| | ||||||||||||||| ||||| | |||  ||| |||| ||||||||||||||||||||||    
T  45566824 ttttcaatacaataataactttttcttttcaattgtatcattcaattaatactatattacattacttttaaaatattgttttttctttaatgaaaaacaa 45566923  T
Q  271 atcaatagttgattaggataatttggtaaaat 302  Q
    | |||| |||||||||||||||||||||||||    
T  45566924 accaatggttgattaggataatttggtaaaat 45566955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 50346624 - 50346783
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||| | ||||||| ||| ||||||||||||||||||| | |||||||||||| ||||||||||||| |||| ||  | ||| | |||||||      
T  50346624 ttgtttcaaactaaatgtcattttgagttttcaatgcaataata-cattttcttttcaattgtacccttcaatcaataataaat-acattacttccaaca 50346721  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  50346722 tattattttttctttaatgaaaaacaaatcaatagttaattaagataatttgataaaataac 50346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 145 - 303
Target Start/End: Complemental strand, 7231047 - 7230888
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatacta-tgt-tacactgcttccaaa 242  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||| |||| | |||||||||||||| | | |||||| |||| |||    
T  7231047 tgtttcaaaatgaatgtcacttttagttacgaatgcaataataactttttcttttcaattgtatcattcaattaatactactatatacactacttcgaaa 7230948  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaata 303  Q
     ||||| |||||||||||||| ||| ||| ||||||||||||||||||||||  |||||||    
T  7230947 ttatta-tttttctttaatgagaaagaaaccaatagttgattaggataatttactaaaata 7230888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 239
Target Start/End: Original strand, 39356849 - 39356978
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnn-ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    |||||||||||||| |||||||||||        |||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  39356849 gtttcaaaatgagtatcgttttagttaaaaaaaattgttttaaaataaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtacc 39356948  T
Q  210 cttcaattaatactatgttacactgcttcc 239  Q
     ||||||||||||||||||||||| |||||    
T  39356949 tttcaattaatactatgttacactacttcc 39356978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 144 - 277
Target Start/End: Original strand, 4392194 - 4392326
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttcc-aaa 242  Q
    |||||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||||||  || ||| ||||| |||    
T  4392194 ttgtttcaaaatgaatgtcagtttcagtttccaatttaataataactttttcttttcaattgtacccttcaattaatactat-atatactacttccaaaa 4392292  T
Q  243 gtattattttttctttaatgaaaaacaaatcaata 277  Q
    |||||||||| | |||||| |||||||||||||||    
T  4392293 gtattattttct-tttaataaaaaacaaatcaata 4392326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 42571681 - 42571573
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||    
T  42571681 ttgtttcaaaatgaatgtcacttgcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaag 42571583  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  42571582 tattactttt 42571573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 50038323 - 50038215
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||| ||||    
T  50038323 ttgttttaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttctaaag 50038225  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  50038224 tattactttt 50038215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 145 - 305
Target Start/End: Original strand, 8817139 - 8817299
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacac--tgcttccaaa 242  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||| |||||| || ||| |||||| || |||||||| |||  |||||  | |||| ||     
T  8817139 tgttttaaaatgaatgttattttcagttatcaatgcaataataattttttcctt-caattgtaccttttaattaata-tattatacacactacttctaat 8817236  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  8817237 gtattattttttctttaatgaaaaataaatcaatagttgattagaataatttgataaaataac 8817299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 199 - 302
Target Start/End: Complemental strand, 13756970 - 13756867
Alignment:
Q  199 tcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggta 298  Q
    |||| |||||||||||||||||| ||||||||| | |||  |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||    
T  13756970 tcaattgtacccttcaattaatattatgttacattacttttaaagtattattttttctttaataaaaaacaaaccaatagttgattaggataatttgcta 13756871  T
Q  299 aaat 302  Q
    ||||    
T  13756870 aaat 13756867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 39358998 - 39359076
Alignment:
Q  224 atgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39358998 atgttacactacttctaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 39359076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 50646262 - 50646154
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||| || ||||||||||||  |||| | |||| ||||    
T  50646262 ttgtttcaaaataaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccatttaattaatactat-atacattacttcaaaag 50646164  T
Q  244 tattattttt 253  Q
    ||||||||||    
T  50646163 tattattttt 50646154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 175 - 307
Target Start/End: Original strand, 27067637 - 27067766
Alignment:
Q  175 caatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatca 274  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||   |||||  ||| ||||   ||| ||||||||||||| |||||||| ||    
T  27067637 caatgcaataataactttttcttttcaattgtacccttcaattaatacta-catacacaactttcaaaacttta-tttttctttaatg-aaaacaaacca 27067733  T
Q  275 atagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||| ||||||    
T  27067734 atagttgattaggataatttggtaaattaacat 27067766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 22857088 - 22857210
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||  ||||||||| |||||||||||||||||||||| |||||  ||||||||||| |||  |||||| |||| |||     
T  22857088 ttgttttaaaatgaatgtcactttcgattttcaatgtaataataactttttcttttcaattgtactgttcaattaatattat-atacactacttctaaaa 22857186  T
Q  244 tattattttttctttaatgaaaaa 267  Q
    |||||||||||||||||| |||||    
T  22857187 tattattttttctttaataaaaaa 22857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 51481961 - 51482091
Alignment:
Q  172 tttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaa 271  Q
    ||||||||||||||||| |||||| |||||| | |||| || |||||||| ||||||||| | ||||||||| |||||||||||||||||||||||  ||    
T  51481961 tttcaatgcaataataattttttcatttcaattataccttttaattaatattatgttacattacttccaaagcattattttttctttaatgaaaaaataa 51482060  T
Q  272 tcaatagttgattaggataatttggtaaaat 302  Q
    ||  | ||| |||||||||||||| ||||||    
T  51482061 tcttttgtttattaggataatttgataaaat 51482091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 144 - 305
Target Start/End: Original strand, 19115385 - 19115534
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | || ||| ||||||||||| ||  ||||| |||||||||    
T  19115385 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattata-cctccaattaatactctg-cacactacttccaaag 19115482  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  19115483 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 19115534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 144 - 306
Target Start/End: Original strand, 42886749 - 42886898
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||| ||||| | ||| ||||||||||||||||||||||||||||   |||||| ||||||||| ||||  ||||| |||||||||    
T  42886749 ttgtttcaaaatgaatgttactttaaatttccaatgcaataataactttttcttttcaa--ttaccctccaattaatattatg-cacactacttccaaag 42886845  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    ||||| ||||          ||||| ||||||||||| || ||||||||||||||||||||||    
T  42886846 tattactttt----------aaaactaatcaatagttaataaggataatttggtaaaataaca 42886898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 223
Target Start/End: Original strand, 4758989 - 4759068
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  4758989 ttgttttaaaataaatgtcactttcactttccaatgcaataataactttttcttttcaattgtacctttcaattaatact 4759068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 11019978 - 11019897
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||| |||||||||||||  ||||| |||||||||||||||    
T  11019978 ttgttttaaaattaatgtcactttcatttttcaatgcaataataattttttcttttcaatcgtacctttcaattaatactat 11019897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 196 - 302
Target Start/End: Complemental strand, 36381474 - 36381366
Alignment:
Q  196 ttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt--tttctttaatgaaaaacaaatcaatagttgattaggataatt 293  Q
    ||||||| |||| ||||||||||||||||| ||||| | |||  |||||||||| |  ||| ||||||||||||||||||||||| |||||| |||||||    
T  36381474 ttttcaattgtatccttcaattaatactatattacattacttttaaagtattatatattttttttaatgaaaaacaaatcaatagatgattaagataatt 36381375  T
Q  294 tggtaaaat 302  Q
    |||||||||    
T  36381374 tggtaaaat 36381366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 31583586 - 31583478
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||||||||||||| || |||||||||||  |||||||||||| |||||| | ||||||||||| ||  ||||| |||||||||    
T  31583586 ttgttttaaaattaatgtcactttcagtttccagtgcaataataatcttttcttttcaattgtaccttccaattaatactctg-cacactacttccaaag 31583488  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  31583487 tattactttt 31583478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 111 - 200
Target Start/End: Complemental strand, 23208474 - 23208387
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttc 200  Q
    |||||||| ||||||||||||||| |       |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  23208474 gtttcaaattgagtgtcgttttagctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaa--caataataactttttcttttc 23208387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 39168802 - 39168862
Alignment:
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  39168802 agtattattttttttttaatgaaaaacaaattaatagttaattaggataatttgataaaat 39168862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 278
Target Start/End: Complemental strand, 47823603 - 47823466
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa- 242  Q
    |||||| ||||| ||||||| ||| |||||| ||||||||||||| |||||||||| || ||||  ||||||||||||||||  ||||||  || ||||     
T  47823603 ttgttttaaaataaatgtcatttttagtttttaatgcaataataattttttctttttaattgtattcttcaattaatactat-atacactattttcaaat 47823505  T
Q  243 --gtatta-ttttttctttaatgaaaaacaaatcaatag 278  Q
      |||||| |||||||||||||| |||||||| ||||||    
T  47823504 ttgtattacttttttctttaatggaaaacaaaccaatag 47823466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 45518541 - 45518478
Alignment:
Q  239 caaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||| |||||||||||||||||| | ||||||| ||||||||||||||||| ||||||    
T  45518541 caaagtattaatttttctttaatgaaaaatatatcaataattgattaggataatttgataaaat 45518478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 40717717 - 40717660
Alignment:
Q  249 ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||    
T  40717717 ttttttctttaatgaaaa-caaaccaatagttgattaagataatttggtaaaataacat 40717660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 52654310 - 52654360
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaa 202  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  52654310 aaataaatgtcactttcagttttcaatacaataataactttttcttttcaa 52654360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 45460665 - 45460743
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatg 226  Q
    |||||||| ||||| | |||||  ||||||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  45460665 ttcaaaattaatgttattttcatatttcaatacaataataactctttcttttcaattgtaccctccaattaatattatg 45460743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 302
Target Start/End: Complemental strand, 36729805 - 36729766
Alignment:
Q  263 aaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  36729805 aaaaacaaaccaatagttgattaggataatttggtaaaat 36729766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 3985946 - 3986008
Alignment:
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||| |||| ||||| || |||||||| |||||||| || ||||||||||||||||||||    
T  3985946 agtattacttttactttagtggaaaacaaaccaatagttaataaggataatttggtaaaataa 3986008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 302
Target Start/End: Complemental strand, 45392008 - 45391952
Alignment:
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||| |||||||||||  | |||||||||||| ||||||||||||||||    
T  45392008 attattttttcttaaatgaaaaacagtt-aatagttgattatgataatttggtaaaat 45391952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 47823449 - 47823406
Alignment:
Q  264 aaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||    
T  47823449 aaaacaaaccaatagttgattaggattatttggttaaataacat 47823406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 26057802 - 26057748
Alignment:
Q  246 ttattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaa 300  Q
    |||||||| ||||| || ||||||||||||||||| || | ||||||||||||||    
T  26057802 ttatttttactttagtggaaaacaaatcaatagttaataaagataatttggtaaa 26057748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 42939967 - 42940004
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgca 181  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  42939967 ttgtttcaaaatgaatgtcattttcatttttcaatgca 42940004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 181
Target Start/End: Complemental strand, 51058304 - 51058267
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgca 181  Q
    |||||| ||||||||||||||||| |||||||||||||    
T  51058304 ttgttttaaaatgaatgtcactttaagttttcaatgca 51058267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 51324191 - 51324143
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttt 192  Q
    |||||| ||||| ||||||| ||||||| ||||||| ||||||||||||    
T  51324191 ttgttttaaaataaatgtcattttcagtattcaatgtaataataacttt 51324143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 219
Target Start/End: Complemental strand, 54403409 - 54403341
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaa 219  Q
    ||||||||||||| ||| |||||  ||||||||  |||| |||||||||||  |||||||| |||||||    
T  54403409 aaaatgaatgtcatttttagtttcaaatgcaatgttaacattttcttttcatttgtaccctccaattaa 54403341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 29567894 - 29568056
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  29567894 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactat-atacactacttccaaag 29567992  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  29567993 tattattttttctttaatgaaaaacaaaccaatagttgattagaataatttggtaaaataacat 29568056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 111 - 302
Target Start/End: Complemental strand, 32807125 - 32806933
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagt-tnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    ||||||||||||||||||||||||  |       |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  32807125 gtttcaaaatgagtgtcgttttagcctaaaaaaattgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacc 32807026  T
Q  210 cttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  32807025 cttcaaataatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaaccaatagttgattaggataattcggtaaaat 32806933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 15823032 - 15823190
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  15823032 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactactttcaaag 15823131  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  15823132 tattattttttctttaatgaaaaacaaaccattagttgattaggataatttggtaaaat 15823190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 49468864 - 49468706
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  49468864 ttgtttcaaaatgaatgtaactttcagtttccaatgcaataataacattttcttttcaattgtacccttcaattaatactatattacactacttccaaag 49468765  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49468764 gattattttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 49468706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 144 - 296
Target Start/End: Original strand, 9915441 - 9915593
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  9915441 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataaatttttcttttcaattgtacccttcaattaatactatgttacactacttgcaaag 9915540  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9915541 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttgg 9915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 147 - 302
Target Start/End: Original strand, 10842781 - 10842936
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||| | ||||||||||||    
T  10842781 tttcaaaatgaatgtcactttcagttttcaatgcaataataacattttcttttcaattgtactcttcaattaatactatgttacagtacttccaaagtat 10842880  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  10842881 tattttttctttaatgaaaaacaaactaatagttgattaagataatttggtaaaat 10842936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 5463573 - 5463731
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||     
T  5463573 ttgtttcaaaatgaatgtcactttcagtttccaatgcaattataactttttcttttcaattgtacactttaattaatactatgttacactacttccaaaa 5463672  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  5463673 tattattttttctttaatgaaaaacaaaccaatagttgattaggattatttggtaaaat 5463731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 31491923 - 31491765
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||| |||||    
T  31491923 ttgtttcaaaatgaatgtcactttcaattttcaatgtcataataactttttcttttcaattgtatccttcaattaatactatgttacactactttcaaag 31491824  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31491823 tataattttttctttaatgaaaaacaaatcaatagttgattatgataatttggtaaaat 31491765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 111 - 302
Target Start/End: Original strand, 46045938 - 46046129
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    |||| ||||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | |||||    
T  46045938 gttttaaaatgagtgtcgttttagtaaaaaaaattgtttcaaaatgaatgtcactttcagttttcgatgcaataataactttttattttcaattataccc 46046037  T
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| ||||||||||||||||||| ||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  46046038 ttcgattaatactatgttacactactttcaaagtattatttattctttaatgaaaatcaaattaatagttgattaggataatttggtaaaat 46046129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 48009008 - 48009166
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||| || ||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  48009008 ttgttttaaaatgaatggcatttttagtttttaatgcaataataactttttcttttcaattgtaccgttcaattaatactatgttacactgcttccaaag 48009107  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  48009108 tattattttttctttattgaaaaacaaaccaatagttgattaggataatttggtaaaat 48009166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 48025407 - 48025249
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||    
T  48025407 ttgtttcaaaatgaatgtcactttcggtttccaatgcaataataactttttcgtttcaattgtacccttcaattaatactatgttacactacttccaaag 48025308  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||||    
T  48025307 tattattttttctttaaagaaaaacaaacaaatagtttattaggataatttggtaaaat 48025249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 144 - 307
Target Start/End: Original strand, 27208987 - 27209149
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||| |||||| ||||||||||| ||| | ||||| |||||||||    
T  27208987 ttgtttcgaaatgaatgtcactttcggtttccaatgcaataataactttttattttcaattgtaccattcaattaatattatat-acactacttccaaag 27209085  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27209086 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 27209149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 149 - 302
Target Start/End: Original strand, 50094232 - 50094386
Alignment:
Q  149 tcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt- 247  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||     
T  50094232 tcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttacaaagtattg 50094331  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     |||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  50094332 tttttttctttaatgaaaagcaaaccaatagttgattaggataatttggtaaaat 50094386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 44108597 - 44108757
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  44108597 ttgttttaaaataaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaag 44108696  T
Q  244 tatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  44108697 tattattttttttctttaatgaaaaacaaaccaatagttgtttaggataatttggtaaaat 44108757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 35848086 - 35847931
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||    
T  35848086 ttgtttgaaagtgaatgtcactttcagtttacaatgcaataataactttttcttttcaattgtacctttcaattaatactatgttacactactttcaaag 35847987  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||   ||||||||||||||||||||||||| ||||||||||||||||    
T  35847986 tattattttttctt---tgaaaaacaaatcaatagttgattaagataatttggtaaaat 35847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 148 - 302
Target Start/End: Complemental strand, 24611669 - 24611514
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||||||| |||||  |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  24611669 ttcaaaatgaatgtcacttttagtttctaatgtaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaagtatt 24611570  T
Q  248 att-ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| ||||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  24611569 atttttttctttaatgaaaaacaaaccaatagttgattagggtaatttagtaaaat 24611514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 31798587 - 31798746
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||||||||||||||| | |||| || |||||||||||||||||||| |||||||||    
T  31798587 ttgtttcaaaatgaacgtcactttcagtttccgatacaataataactttttcttttcaattataccttttaattaatactatgttacactacttccaaag 31798686  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  31798687 tattatttttttctttaatgaaaaacaaaccaatagttgattaagataatttggtaaaat 31798746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 26595221 - 26595060
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| |||||||||||||||  ||||||  ||||||||     
T  26595221 tgttttaaaatgaatgtcactttcagtttacaatgcaataataaatttttcttttcaattgtaccattcaattaatactat-atacactatttccaaaga 26595123  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  26595122 attaatttttctttaatgaaaaacaaaccaataattgattaggataatttggtaaaataacat 26595060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 151 - 301
Target Start/End: Complemental strand, 46286964 - 46286814
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||  ||  ||||||| |||    
T  46286964 aaaaagaatgtcactttcatttttcaatgcaataataactttttcttttcaattgcacccttcaattaatactatattacactatttttaaagtatcatt 46286865  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaa 301  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46286864 ttttctttaatgaaaaacaaaccaatagttgattaggataatttggtaaaa 46286814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 52125289 - 52125131
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| ||||| || |||| |||||||||||||||||| ||||||||||| |||||| ||    
T  52125289 ttgtttcgaaatgaatgtcaatttcagtttccaatgcaataataattttttattctcaattgtacccttcaattaatattatgttacactacttccatag 52125190  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  52125189 tattattttttgtttaatgaaaaacaaaccaatagttgattagaataatttggtaaaat 52125131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 15573605 - 15573769
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataac----tttttcttttcaactgtacccttcaattaatactatgttacactgcttcc 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||| ||||||| ||| |||||    
T  15573605 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttttttcttttcaattgtacccttcaattaatattatgttagactacttcc 15573704  T
Q  240 aaagtatta--ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||| |||||  ||||||||||||||||||||||| |||||| | |||||||||||||||||||||    
T  15573705 aaaatattattttttttctttaatgaaaaacaaaccaatagataattaggataatttggtaaaat 15573769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 161 - 302
Target Start/End: Original strand, 43759347 - 43759488
Alignment:
Q  161 tcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaa 260  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||| | |||||||||||||||    
T  43759347 tcactttcagttttcgatgcaataataattttttcttttcaattgtacccttcaattaataatatgttacactacttccaaaatgttattttttctttaa 43759446  T
Q  261 tgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||| ||||||||||| |||||||||||||| ||||||    
T  43759447 tgaaaaaccaatcaatagttaattaggataatttgataaaat 43759488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 34110535 - 34110676
Alignment:
Q  154 atgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttt 253  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| || ||||||||||||||| || ||| |||| || ||| |||||||||||||||    
T  34110535 atgaatgttactttcagtttccaatgcaataataactttttctttttaattgtacccttcaattattattatcttactctactttcaaagtattattttt 34110634  T
Q  254 tctttaatgaaaaacaaatcaatagttgattaggataatttg 295  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  34110635 tctttaatgaaaaacaaaccaatagttgattaggataatttg 34110676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 145 - 302
Target Start/End: Complemental strand, 49426565 - 49426414
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||||||||| |||||||||  ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |    
T  49426565 tgtttcaaaataaatgtcact--cagttttcaatgcaataataattttttcttttcaactgtacccgtcaattaatactatgttacactacttccaaaat 49426468  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |    ||||| ||||||||| |||||| ||||||||||||||||||||||||||||||    
T  49426467 a----tttttttttaatgaagaacaaaccaatagttgattaggataatttggtaaaat 49426414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 1740794 - 1740635
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||| |||||||||||||| |||||||| ||||||||     
T  1740794 ttgttttaaaatgaatgtcactttcagtttccaatgaaataataactttttattttcaattgtaccattcaattaatactacgttacactacttccaaaa 1740695  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
     |||| ||||||||||||| |||||||||  |||||||||||| ||||||||||||||||    
T  1740694 cattatttttttctttaataaaaaacaaactaatagttgattatgataatttggtaaaat 1740635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 25561026 - 25560863
Alignment:
Q  144 ttgtttcaaaatgaatgtcacttt-cagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||||||||| ||| | ||||| |||||| |||||||||||||| ||||||||||||| | |||| ||||||||||||||| | ||||| ||||||||    
T  25561026 ttgtttcaaaataaatattacttttcagtttccaatgcaataataattttttcttttcaattatacctttcaattaatactatat-acactacttccaaa 25560928  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
     ||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  25560927 atattattttttctttaatgaaaaacaaactaatagttgattatgataatttggtaaaataacat 25560863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 16757347 - 16757189
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||  |||||  ||| |||||    
T  16757347 ttgtttcaaaatgtatgtcactttcagtttccaatgcaataataacttattcttttcaattgtacccttcaattaatactat-atacacaactttcaaag 16757249  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||| ||    |||||||||||  ||||||||||||||||| ||||||||||||||||    
T  16757248 tattatttttcct----tgaaaaacaaactaatagttgattaggatagtttggtaaaataacat 16757189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 144 - 265
Target Start/End: Original strand, 26755218 - 26755338
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||| || |||||||||||||||||||| | |||||||||||||||||||||| ||||| |||||||||    
T  26755218 ttgtttcaaaatgaatgtcactttcagtttccaatacattaataactttttcttttcaatt-tacccttcaattaatactatgtcacactacttccaaag 26755316  T
Q  244 tattattttttctttaatgaaa 265  Q
    ||||||||||||||||||||||    
T  26755317 tattattttttctttaatgaaa 26755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 152 - 302
Target Start/End: Original strand, 25151821 - 25151966
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattt 251  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||||||||||||||      ||||||||| |||||||||||||||||    
T  25151821 aaatgaatgtcactttcggtttccaatgcaataataacattttcttttcaattgtacccttcaatta------tgttacactacttccaaagtattattt 25151914  T
Q  252 tttctttaatg-aaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  25151915 tttctttaatgaaaaaaaaaaccaatagttgattagtataatttggtaaaat 25151966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 18794694 - 18794533
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||| |||||||||  ||||||||||||||||||||||||||  || ||||||||||||||| ||| | ||||| ||||||||     
T  18794694 ttgttttaaaataaatgtca-tttcagtttcgaatgcaataataactttttcttttcagttgcacccttcaattaatattatat-acactacttccaaaa 18794597  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| |||||||||||||| ||||||||  ||||||||||||| ||||||||||||||||||||    
T  18794596 tattcttttttctttaatggaaaacaaactaatagttgattagaataatttggtaaaataacat 18794533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 172 - 307
Target Start/End: Complemental strand, 31699414 - 31699280
Alignment:
Q  172 tttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaa 271  Q
    |||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||   ||| | |||||||| ||||||||||||||||||||||||||||    
T  31699414 tttctatgtaataataattttttcttttcaattgtacccttcaattaatactataa-acattacttccaaaatattattttttctttaatgaaaaacaaa 31699316  T
Q  272 tcaatagttgattaggataatttggtaaaataacat 307  Q
     ||||||||||||| |||||||||||||||||||||    
T  31699315 ccaatagttgattatgataatttggtaaaataacat 31699280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 145 - 304
Target Start/End: Complemental strand, 49900910 - 49900750
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaa-tgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||| ||||| ||||||||||||||||||||| | ||||||||||||||| ||||||| |||||| ||||||||||| ||| | ||||| ||| |||||    
T  49900910 tgttttaaaataaatgtcactttcagttttcaaatacaataataactttttattttcaattgtacctttcaattaataatatat-acactactttcaaag 49900812  T
Q  244 tattatttttt-ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||| |||||| |||||| ||| |||||||||||||||||||||| |||||||||    
T  49900811 tattatttttttctttaaagaaaaataaaccaatagttgattaggataatttagtaaaataa 49900750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 165 - 302
Target Start/End: Complemental strand, 52066420 - 52066285
Alignment:
Q  165 tttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaa 264  Q
    ||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||| ||| ||||||| ||| ||||| ||| |||||| |||||||||    
T  52066420 tttcaattttcaatgcagtaataa-tttttcttttcaattgtacccttcaattaatattatattacactactttcaaag-atttttttttgtttaatgaa 52066323  T
Q  265 aaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  52066322 aaacaaatcaatagttgattaagataatttggtaaaat 52066285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 8895161 - 8895006
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||| ||||| ||||| | |||| |||| |||| ||| |||||||||| || |||||||||||||||||| ||| | |||||  || |||| |||||||    
T  8895161 aaaataaatgttacttttaatttttaatgtaatagtaaatttttctttttaattgtacccttcaattaatattatat-acactattttcaaaatattatt 8895063  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8895062 ttttttttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 8895006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 144 - 267
Target Start/End: Original strand, 46554796 - 46554918
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||||||| ||||||| ||||||||||||||||||||||  |||||| |||||||||    
T  46554796 ttgttttaaaatgaatgtcaccttcagtttccactgcaataataactttttattttcaattgtacccttcaattaatactat-atacactacttccaaag 46554894  T
Q  244 tattattttttctttaatgaaaaa 267  Q
    |||||||||||||||||| |||||    
T  46554895 tattattttttctttaataaaaaa 46554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 7191360 - 7191197
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||| ||||||||||||  ||||| ||| |||||||||||||||||||||| | |||| |||||||||||||||  |||||| |||  |||     
T  7191360 ttgttttaaaataaatgtcactttcgattttctatgtaataataactttttcttttcaattatacctttcaattaatactat-atacactacttttaaaa 7191262  T
Q  244 tatta-ttttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| |||||||||||| |||||| |||  ||||||||||||||||||||||||||||||||||    
T  7191261 tattatttttttctttaacgaaaaataaacaaatagttgattaggataatttggtaaaataacat 7191197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 225
Target Start/End: Complemental strand, 40717445 - 40717368
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40717445 ttcaaaatgaatgtcactttcagttttcaatgcaataataattttttcttttcaactgtacccttcaattaatactat 40717368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 144 - 253
Target Start/End: Original strand, 50249308 - 50249416
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||    
T  50249308 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatactttg-cacactacttccaaag 50249406  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  50249407 tattactttt 50249416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 151 - 254
Target Start/End: Original strand, 25487093 - 25487195
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||||||| |    
T  25487093 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaagtattaat 25487191  T
Q  251 tttt 254  Q
    ||||    
T  25487192 tttt 25487195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 144 - 251
Target Start/End: Complemental strand, 43358353 - 43358246
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||| |||| ||||||| ||||| |||||||||||||||||||||||| ||||| |||    
T  43358353 ttgtttcaatatgaatatcactttcacttttcaatgcaataataacattttattttcaattgtactcttcaattaatactatgttacactacttccgaag 43358254  T
Q  244 tattattt 251  Q
    ||||||||    
T  43358253 tattattt 43358246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 163 - 307
Target Start/End: Complemental strand, 2610964 - 2610823
Alignment:
Q  163 actttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatg 262  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||| | ||||||||||| | |  |||||| |||||||||||||||||||  |||||||    
T  2610964 actttcagttttcaatacaataataattttttcttttcaattgtaacattcaattaatattct-atacactacttccaaagtattattttt--tttaatg 2610868  T
Q  263 aaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| ||| ||| | ||||||||||||| |||||||||||||||    
T  2610867 aaaaataaaccaacaattgattaggataacttggtaaaataacat 2610823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 111 - 245
Target Start/End: Complemental strand, 38531483 - 38531349
Alignment:
Q  111 gtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccc 210  Q
    ||||||||||||| |||||||||||        |||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| | | |||    
T  38531483 gtttcaaaatgagcgtcgttttagtcaaaaaaattgtttcaaaatgaatgtcattttcagtttccaatgcaataataattttttcttttcaattatgccc 38531384  T
Q  211 ttcaattaatactatgttacactgcttccaaagta 245  Q
    ||||||| ||||||||||||||| ||| |||||||    
T  38531383 ttcaattgatactatgttacactactttcaaagta 38531349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 26352234 - 26352155
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  26352234 ttgtttcaaaatgaatgtcacttttagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatact 26352155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 145 - 302
Target Start/End: Complemental strand, 7214185 - 7214034
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||| ||||| ||||||||||   ||||||||||||||||||| |||||||||| || | ||| ||||||||||||||||||||||||  || |||       
T  7214185 tgttttaaaataaatgtcactt---gttttcaatgcaataataaatttttctttttaattatacgcttcaattaatactatgttacactattttcaa--- 7214092  T
Q  245 attattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    | ||||| || |||||| |||||||||| ||||||||||||| |||||||||||||||    
T  7214091 aatatttcttttttaattaaaaacaaataaatagttgattagaataatttggtaaaat 7214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 13408418 - 13408309
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||| | || ||| ||||||||||| ||||||||     
T  13408418 ttgttttaaaatgaattttactttcagttttcaatgcaataataactttttcttttcaattgtaccctttagttgatattatgttacactacttccaaat 13408319  T
Q  244 tattattttt 253  Q
     |||||||||    
T  13408318 gattattttt 13408309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 34047388 - 34047309
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  34047388 ttgtttcaaaatgaatgtcactttgagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 34047309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 305
Target Start/End: Complemental strand, 34032233 - 34032083
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||| | ||||||||||| ||  || || |||||||||    
T  34032233 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccgtccaattaatactttg-cacgctacttccaaag 34032135  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    ||||| ||||          ||||| || |||||||| || |||||||||||||||||||||    
T  34032134 tattactttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 34032083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 145 - 307
Target Start/End: Complemental strand, 51244988 - 51244826
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagt 244  Q
    ||||| ||||| || |||||||||| ||| |||| ||||||||||||||||||||||| |||||  |||| ||||||||||  |||| | ||||||||||    
T  51244988 tgttttaaaataaaagtcactttcacttt-caatacaataataactttttcttttcaattgtacatttcagttaatactat-atacattacttccaaagt 51244891  T
Q  245 attattt--tttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    | |||||  ||||||| |||||||| ||||||||  |||| ||||||||||| ||||||||||||    
T  51244890 aatattttatttctttgatgaaaaataaatcaatgattgactaggataatttagtaaaataacat 51244826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 8989781 - 8989630
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||| ||||||| ||||||||||||||  |||||||| ||||| |    || | || ||||||||||||||| | | ||||| | | |||| |||||||    
T  8989781 aaaataaatgtcattttcagttttcaatagaataataatttttttt----aattatatccttcaattaatactctat-acactacattcaaaatattatt 8989687  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  8989686 ttttctttaatgaaaaacaaaccaatagttgattataataatttggtaaaataacat 8989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 12591235 - 12591156
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  12591235 ttgttttaaaatgaatgtcacttttagtttccaatgcaataataactttttcttttcaattgtaccctccaattaatact 12591156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 253
Target Start/End: Original strand, 27720963 - 27721064
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||  |  ||||| |||||||||||||| |    
T  27720963 aaaatgaatgtcactttcagttttcaatataataataactttttcttttcaattgtaccctccaattaatactcag-cacactacttccaaagtattact 27721061  T
Q  251 ttt 253  Q
    |||    
T  27721062 ttt 27721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 151 - 307
Target Start/End: Complemental strand, 33622511 - 33622349
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatta-t 249  Q
    ||||||||||||| ||||  |||||||||||||||||||||| ||||||||| ||||| ||| | |||||| |||| |||||| |||| |||||||||      
T  33622511 aaaatgaatgtcattttcgattttcaatgcaataataactttatcttttcaattgtactctttagttaatattatg-tacactacttctaaagtattaca 33622413  T
Q  250 tttttctttaatgaaaaacaaatcaa------tagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||||||| |||  ||      |||||||||| ||||||||| |||||||||||    
T  33622412 tttttctttaatgaaaaataaactaatactactagttgattaagataatttgataaaataacat 33622349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 223
Target Start/End: Complemental strand, 52024387 - 52024308
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    |||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  52024387 ttgtttcaaaataaatgttattttcagttttcaatgcaataataaatttttcttttcaattgtaccctccaattaatact 52024308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 12484781 - 12484673
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||| ||| ||||| ||  |||| |||||||||||||||||||||||||||||||| ||||||||| || |  ||||| |||||||||    
T  12484781 ttgtttcaaaatgaatttcattttcatttgccaatacaataataactttttcttttcaactgtaccctccaattaatatta-ggcacactacttccaaag 12484683  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  12484682 tattactttt 12484673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 44557197 - 44557116
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||| |||||||||||| |||||| |||||||||| ||||    
T  44557197 ttgttttaaaatgaatgtcactttcagtctccaatgcaataataacattttcttttcaattgtaccattcaattaatgctat 44557116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 307
Target Start/End: Original strand, 5044 - 5139
Alignment:
Q  211 ttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||| ||| | ||||| ||| ||||||||||||||||| | |  |||||||||| |||||||||||||||||||||||||||||||||||    
T  5044 ttcaattaatattatat-acactactttcaaagtattattttttcatcagcgaaaaacaaaccaatagttgattaggataatttggtaaaataacat 5139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 38530894 - 38530834
Alignment:
Q  242 agtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  38530894 agtattattttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 38530834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 44258660 - 44258588
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaat 216  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||    
T  44258660 ttgttttaaaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccctccaat 44258588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 144 - 255
Target Start/End: Complemental strand, 39477860 - 39477751
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| |||||| |||||||||| | ||| |||||||||||||| ||||| ||||||| ||||| ||||||||||||||||  |||||| ||||| |||    
T  39477860 ttgttttaaaatggatgtcacttttaatttccaatgcaataataa-ttttttttttcaattgtacacttcaattaatactat-atacactacttcctaag 39477763  T
Q  244 tattattttttc 255  Q
    ||||||||||||    
T  39477762 tattattttttc 39477751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 235 - 305
Target Start/End: Complemental strand, 5225888 - 5225818
Alignment:
Q  235 cttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    |||||||||||||| |||||||||||||||||| ||| |||||||| |||| |||||||||||||||||||    
T  5225888 cttccaaagtattactttttctttaatgaaaaataaaccaatagttaattatgataatttggtaaaataac 5225818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 169 - 307
Target Start/End: Original strand, 9092618 - 9092752
Alignment:
Q  169 agttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattattttttctttaatgaaaaa 267  Q
    ||||| |||| ||||||||| ||||| ||||||||  |||| |||||||||||||     |||||| |||| |||||||| |||||||||||||||||||    
T  9092618 agtttccaatccaataataatttttttcttttcaaacgtactcttcaattaataca----tacactacttcaaaagtatt-ttttttctttaatgaaaaa 9092712  T
Q  268 caaatcaatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||| |||||||| |||||||   ||||||||||    
T  9092713 caaatcaatatttgattagaataattttagaaaataacat 9092752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 233
Target Start/End: Original strand, 24884420 - 24884502
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacact 233  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||||||||||||| ||| ||||    
T  24884420 aaaataaatgtcactttcaatttccaatgcaataataactttttattttcaattatacccttcaattaatactaagtttcact 24884502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 307
Target Start/End: Original strand, 28538232 - 28538365
Alignment:
Q  174 tcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatttt-ttctttaatgaaaaacaaat 272  Q
    |||||| ||||||||||||||||||| ||  |   | || |||||||||||| | |||||  || ||| |||||||||| ||||||||||||||| |||     
T  28538232 tcaatgtaataataactttttctttttaatcgagtcatttaattaatactatat-acactattttcaatgtattatttttttctttaatgaaaaataaac 28538330  T
Q  273 caatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||| |||||||||||||||||||||    
T  28538331 caatagttgattatgataatttggtaaaataacat 28538365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 30292938 - 30293012
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaatta 218  Q
    |||||| |||||||||| |||||||||||| |||||||||||||||||| | |||||||||||||||| ||||||    
T  30292938 ttgttttaaaatgaatgccactttcagtttccaatgcaataataactttgttttttcaactgtaccctccaatta 30293012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 14373559 - 14373416
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||| ||||||||| |||||||| ||||||||||| ||||||| | |||||| ||||||||| | ||  ||||| ||| ||||||||||||    
T  14373559 aaaatgaatgtcattttcagtttccaatgcaacaataactttttattttcaattataccctccaattaataatctg-cacactactttcaaagtattatt 14373461  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataac 305  Q
    |||          ||||| || |||||||| || |||||||||||||||||||||    
T  14373460 ttt----------aaaactaaccaatagttaataaggataatttggtaaaataac 14373416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 211
Target Start/End: Complemental strand, 14593465 - 14593406
Alignment:
Q  152 aaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtaccct 211  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  14593465 aaatgaatgtcactttcagtttccaatgcaataataattttttcttttcaattgtaccct 14593406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 46271086 - 46271016
Alignment:
Q  235 cttccaaagtattattttttctttaatgaaaaacaaatcaata-gttgattaggataatttggtaaaataa 304  Q
    |||||||||||||||||||||||||||||||||||||  |||| |||||||| |||||| |||||||||||    
T  46271086 cttccaaagtattattttttctttaatgaaaaacaaactaatacgttgattacgataatctggtaaaataa 46271016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 24483386 - 24483450
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtac 208  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||| |||||    
T  24483386 ttgtttcaaaatgaatgtcagtttcagtttccaatacaataataactgtttcttttcaattgtac 24483450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 49403023 - 49402947
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||| ||| ||  ||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||    
T  49403023 tgtttcaaaataaatatcgttttcagtttccaatgcaataataactttttcttttcaattgtactctccaattaata 49402947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 151 - 306
Target Start/End: Original strand, 11799466 - 11799620
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||||||||| ||  |||||||||| ||||| ||| |||||||||| || ||||   || ||||||||||||||  || | ||   ||||||||| |    
T  11799466 aaaatgaatgtcatttcaagttttcaatacaatagtaagtttttctttttaattgtaatatttaattaatactatgtg-cattactcttaaagtattact 11799564  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataaca 306  Q
    ||| |||||||| |||||||||||||| || || |||||| | |||||||||||||    
T  11799565 tttactttaatggaaaacaaatcaataattaataaggatagtgtggtaaaataaca 11799620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 146 - 225
Target Start/End: Complemental strand, 46271468 - 46271389
Alignment:
Q  146 gtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactat 225  Q
    |||||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||||   ||| ||||||||||||||||    
T  46271468 gtttcaaaatgaatgtcattttcagtttccaatggaataataattttttattttcaataatacacttcaattaatactat 46271389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 52706880 - 52706953
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaatta 218  Q
    |||||| ||||| |||||||||||||||||| |||| |||||||| |||||||||| || |||||||||||||||    
T  52706880 ttgttttaaaat-aatgtcactttcagtttttaatgtaataataattttttctttttaattgtacccttcaatta 52706953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 39125647 - 39125723
Alignment:
Q  145 tgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaata 221  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||    
T  39125647 tgtttcaaaatgactgtcattttaagttttcaatgcaataataaatttttctttccagttctacccttcaatcaata 39125723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 44557112 - 44557060
Alignment:
Q  255 ctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||||||||||||||| ||| |||| |||| |||||||||||||||||||||    
T  44557112 ctttaatgaaaaacaaaccaacagtttattaagataatttggtaaaataacat 44557060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 304
Target Start/End: Original strand, 38947695 - 38947751
Alignment:
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    ||||||||||||||||||||| |||||||| ||| |||| | ||||||||||||||||    
T  38947695 tattttttctttaatgaaaaa-aaatcaatggttaattatggtaatttggtaaaataa 38947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 38947653 - 38947696
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataata 187  Q
    |||||| ||||||||||||||||||||| | |||||||||||||    
T  38947653 ttgttttaaaatgaatgtcactttcagtatccaatgcaataata 38947696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 307
Target Start/End: Complemental strand, 33694447 - 33694413
Alignment:
Q  273 caatagttgattaggataatttggtaaaataacat 307  Q
    |||||||||||||| ||||||||||||||||||||    
T  33694447 caatagttgattagaataatttggtaaaataacat 33694413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 17504552 - 17504476
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgt 227  Q
    |||||||| |||||||| |||||| ||||| | | |  ||||| |||||||| |||| |||||||||||||| ||||    
T  17504552 aaaatgaaagtcacttttagtttttaatgctacattgtcttttccttttcaattgtatccttcaattaataccatgt 17504476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 24895 - 24737
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||    
T  24895 ttgtttcaaaatgaatgtcactttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacaatacttccaaag 24796  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  24795 tattatcttttctttaatgaaaaacaaaccaatagttgattaggatagtttggtaaaat 24737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 3656 - 3501
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||    
T  3656 tttcaaaatgaatgtcactttcagtttccaatacaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttctaaagtat 3557  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3556 tattttttctttaatgaaaaacaaaccaatagttgattaggataatttgataaaat 3501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 144 - 302
Target Start/End: Complemental strand, 9796 - 9639
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||     
T  9796 ttgttttaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaatactatgttacactacttccaaa- 9698  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9697 tattattttttctttaatgaaaaacaactcaatagttgattatgataatttggtaaaat 9639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 10110 - 9947
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataacttttt-cttttcaactgtacccttcaattaatactatgttacactgcttccaaa 242  Q
    |||||| ||||||||||||||||||| |||||||| | ||||||| ||||| |||||||| ||||||||||||||| |||||| | ||| | |||| |||    
T  10110 ttgttttaaaatgaatgtcactttcaattttcaatactataataatttttttcttttcaattgtacccttcaattagtactatat-acaatacttcaaaa 10012  T
Q  243 gtattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
     ||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||||||||    
T  10011 atattattttttctttaaggaaaaacaaactaatagttgattaagataatttggtaaaataacat 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 111; Significance: 5e-56; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 144 - 302
Target Start/End: Original strand, 62631 - 62789
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||||||||||||||||||||||||| | ||| ||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||| |    
T  62631 ttgtttcaaaatgaatgtcactttcagtttcctatgtaataataactttttctttttaattgtacccttcaattaatattatgttacactacttccaagg 62730  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    ||||| || ||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  62731 tattacttcttctttaatgaaaaacaaaccaatagttgattaggacaatttggtaaaat 62789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 151 - 302
Target Start/End: Complemental strand, 21229 - 21078
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||    
T  21229 aaaatgactgtcactttcagtttcaaatgcaataataattttttcttttcaattgtacccttcaattaatactatgttacactacttccaaatgattatt 21130  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    || | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  21129 ttctttttaatgaaaaacaaaccaatagttgattaggataatttggtaaaat 21078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 719 - 567
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattatt 250  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||||| || |||||||||||||||||| ||| | ||||| ||||||||||||||||    
T  719 aaaatgaatgtcacttacaatttccaatgcaataataactttttctttttaattgtacccttcaattaatattatat-acactacttccaaagtattatt 621  T
Q  251 ttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||  |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  620 tttgttttaatgaaaaagaaatcaatagttgattatgataatttggtaaaataa 567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 148 - 307
Target Start/End: Complemental strand, 18405 - 18247
Alignment:
Q  148 ttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtatt 247  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | |||  ||||||  || |||||||||    
T  18405 ttcaaaatgaatgtcattttcagtttccaatgcaataataactttttcttttcaattgtacccttcaattaacattat-atacactattttcaaagtatt 18307  T
Q  248 attttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||||| |||||||||||||||||| |||||||||||||  |||||||| |||||||||||    
T  18306 attttatctttaatgaaaaacaaaccaatagttgattaaaataatttgataaaataacat 18247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 147 - 307
Target Start/End: Original strand, 4566 - 4725
Alignment:
Q  147 tttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtat 246  Q
    ||||||||||||||||||||| | |||| ||||||||||||| ||||||||||||| |||||| |||||| |||| ||| | ||||| |||||||| |||    
T  4566 tttcaaaatgaatgtcacttttaatttttaatgcaataataattttttcttttcaattgtacctttcaatcaatattatat-acactacttccaaaatat 4664  T
Q  247 tattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
    ||| ||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  4665 tatatttactttaataaaaaacaaatcaatagttgattaggatagtttggtaaaataacat 4725  T

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Target: scaffold0983 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 144 - 307
Target Start/End: Complemental strand, 841 - 679
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    |||||||| ||||||||||||||||||||| || || |||||||| ||||||||||||| ||||||||| |||||||| ||| | |||||  ||||||||    
T  841 ttgtttcacaatgaatgtcactttcagtttccactggaataataattttttcttttcaattgtaccctttaattaatattatat-acactaattccaaag 743  T
Q  244 tattattttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataacat 307  Q
      || ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  742 acttgttttttctttaatgaaaaacatatcaatagttgattaagataatttggtaaaataacat 679  T

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Target: scaffold0026 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 151 - 304
Target Start/End: Original strand, 4145 - 4298
Alignment:
Q  151 aaaatgaatgtcacttt-cagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaagtattat 249  Q
    ||||||||||||| ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| | ||||| |||| |||||||| |    
T  4145 aaaatgaatgtcatttttcaattttcaatgcaataataattttttcttttcaattgtacccttcaattaatattatat-acactacttctaaagtattgt 4243  T
Q  250 tttttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaataa 304  Q
    |||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  4244 ttttcctttaataaaaaacaaattaatagttgataaggataatttggtaaaataa 4298  T

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Target: scaffold0078 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 110 - 265
Target Start/End: Complemental strand, 1602 - 1446
Alignment:
Q  110 tgtttcaaaatgagtgtcgttttagttnnnnnnnttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacc 209  Q
    ||||||||||| |||||||||||| |        ||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||    
T  1602 tgtttcaaaataagtgtcgttttaatcaaaaaaattgtttcaaaatgaatgtcactttcagtttctaatgcaatgataactttttcttttcaattgtacc 1503  T
Q  210 cttcaattaatactatgttacactgcttccaaagtattatt-ttttctttaatgaaa 265  Q
    ||||| |||||| ||||||||||| |||||||| ||||||| |||||||||||||||    
T  1502 cttcatttaatattatgttacactacttccaaaatattatttttttctttaatgaaa 1446  T

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Target: scaffold0332 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 253
Target Start/End: Complemental strand, 3965 - 3857
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatactatgttacactgcttccaaag 243  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||  ||||| |||||||||    
T  3965 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaattgtaccctccaattaatactctg-cacactacttccaaag 3867  T
Q  244 tattattttt 253  Q
    ||||| ||||    
T  3866 tattactttt 3857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 9602 - 9705
Alignment:
Q  204 tgtacccttcaattaatactatgttacactgcttccaaagtattatttt-ttctttaatgaaaaacaaatcaatagttgattaggataatttggtaaaat 302  Q
    |||||||||||||||||||||| | | ||| ||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  9602 tgtacccttcaattaatactatat-atactactttcaaattattatttttttctttaatgaaaaacaaaccaatagttgattaggataatttagtaaaat 9700  T
Q  303 aacat 307  Q
    |||||    
T  9701 aacat 9705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 9470 - 9516
Alignment:
Q  171 ttttcaatgcaataataactttttcttttcaactgtacccttcaatt 217  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  9470 ttttcaatgcaataataattttttcttttcaattgtaccctttaatt 9516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 661 - 589
Alignment:
Q  151 aaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaattaatact 223  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  661 aaaatgaatgtcactttcagtttccaatgcaataataattttttctttacaattgtacccttcaattaatact 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 265 - 301
Target Start/End: Complemental strand, 418 - 382
Alignment:
Q  265 aaacaaatcaatagttgattaggataatttggtaaaa 301  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  418 aaacaaatcaatagttgattaagataatgtggtaaaa 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 153311 - 153382
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataactttttcttttcaactgtacccttcaa 215  Q
    |||| ||||||||||||||| ||||| ||||||||||||| |||||| |||| || ||| ||||||||||||    
T  153311 ttgtgtcaaaatgaatgtcattttcaattttcaatgcaatgataactatttcattccaattgtacccttcaa 153382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 75454 - 75410
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaatgcaataataa 188  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  75454 ttgtttcaaaatgaatgtcacattcagttttcaaagcaataataa 75410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 45392 - 45425
Alignment:
Q  144 ttgtttcaaaatgaatgtcactttcagttttcaa 177  Q
    |||||||||||||||||||||||||||| |||||    
T  45392 ttgtttcaaaatgaatgtcactttcagtgttcaa 45425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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