View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19101_low_7 (Length: 201)
Name: NF19101_low_7
Description: NF19101
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19101_low_7 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 87; Significance: 6e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 6e-42
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 21721160 - 21721266
Alignment:
| Q |
76 |
cactcggattatatcgtatgttcgggtcatgttaactagtatctatgaatactagttaaagaaacaaatataaagatatttagaatcaactatctatttt |
175 |
Q |
| |
|
|||||||| ||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21721160 |
cactcggaacataccgtatgttcgggtcatattaactagtatctctgaatactagttaaagaaacaaatataaagatatttagaatcaactatctatttt |
21721259 |
T |
|
| Q |
176 |
atgtgtt |
182 |
Q |
| |
|
||||||| |
|
|
| T |
21721260 |
atgtgtt |
21721266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University