View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19102_high_7 (Length: 285)
Name: NF19102_high_7
Description: NF19102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19102_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 268
Target Start/End: Complemental strand, 9377340 - 9377073
Alignment:
| Q |
1 |
ccaaccataacccctgttcatgaaaattacatcacacacataacaaagtttcaacaactatattttctgttcatcagttagactgatttgttctaaaact |
100 |
Q |
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| T |
9377340 |
ccaactataacccctgttcatgaaaattacatcacacacataacaaagtttcaacaactatatcctctgttcatcagttagactgatttgttctaaaact |
9377241 |
T |
|
| Q |
101 |
tgttatgacccaactcagatattctaaactaatacttcaactcaaattgttgattgtatgtaacaataaatacaagcatgttggcaactttattttaact |
200 |
Q |
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| T |
9377240 |
tgttatgacccaactcagatattctaaactaatacttcaactcaaattgttgattgtatgtaacaataaatacaagcatgttggcaaatttattttaact |
9377141 |
T |
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| Q |
201 |
ttatactacgaaaaagcttttacataagtgtgtatcatgattcatgatttatgatgctaagcacttat |
268 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9377140 |
ttatgctacgaaaaagcttttacataagtgtgtatcatgattcatgatttatgatgctaagcacttat |
9377073 |
T |
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