View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19102_low_9 (Length: 282)
Name: NF19102_low_9
Description: NF19102
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19102_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 33902879 - 33903144
Alignment:
| Q |
1 |
ttgtttcaagagaatccttatggttctttttcacaacaacaacattatttttcatcatgtcatggctctttgttctccgttccacacgttcagattcaac |
100 |
Q |
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| T |
33902879 |
ttgtttcaagaaaatctttatggttctttttcacaacaacaacattatttttcatcatgtcatggctctttgttctccgttccacacgttcagattcaac |
33902978 |
T |
|
| Q |
101 |
accagccaccatctcacagcttctttccaccacctccaacgacggttcatatttggtaacatctcaatcacaaaactctgaatcctccttcagcaataga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33902979 |
accagccaccatctcacagcttctttccaccacctccaacgacggttcagatttggtaacatctcaatcacaaaactctgaatcctccttcagcaataga |
33903078 |
T |
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| Q |
201 |
gcaatccttgtaaacaccaaaacaaaaacaccagaaacaccaaaatgtattactgaaacaaccacc |
266 |
Q |
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|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
33903079 |
gcaatccttgtaaacaccgaaacaaaaacaccagaaactccaaaatgtattactgaaacaaccacc |
33903144 |
T |
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