View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_high_114 (Length: 260)
Name: NF19103_high_114
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_high_114 |
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Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 52709554 - 52709786
Alignment:
| Q |
15 |
aaggatggtagataatgaattaatgtctttctatttaatctccatcaacagctctgtcacacattatgaactagctataattcaaatagattttccaaaa |
114 |
Q |
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| T |
52709554 |
aaggatggtagataatgaattaatgtctttctatttaatctccatcaacagctctgtcacacattatgaactagctataattcaaatagattttccaaaa |
52709653 |
T |
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| Q |
115 |
atagaatcgctgtaatcccaaatagctgtttctnnnnnnntgaaaagctttaattgcaatgaaaatgtactactataaactactagcattttactaatga |
214 |
Q |
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| T |
52709654 |
atagaatcgctgtaatcccaaatagctgtttctaaaaaaatgaaaagctgtaattgcaatgaaaatgtactactataaactactagcattttactaatga |
52709753 |
T |
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| Q |
215 |
aaaatggtttctcacaaacaggaagatcaaagt |
247 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
52709754 |
aaaatggtttctcacaaacaggaagatcaaagt |
52709786 |
T |
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