View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_high_117 (Length: 257)
Name: NF19103_high_117
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_high_117 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 14376652 - 14376416
Alignment:
| Q |
1 |
ctcttaagatcacgtactcgaaggatccccattaatgcatcattcagaattttctgcatgagaaaaagtcaagtttatttgtttgatatgaagaatatta |
100 |
Q |
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| T |
14376652 |
ctcttaagatctcgtactcgaaggatccccattaatgcatcattcagaattttctgcatgagaaaaagtcaagtttatttgtttgatatgaagaatatta |
14376553 |
T |
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| Q |
101 |
tactcttcgcaataattggatttatggaccagcaaactcagaaaatgcatgacactctttccatctacacgccaatcaccattagtagcttgaatattgg |
200 |
Q |
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| T |
14376552 |
tactcttcgcaataattggatttatggaccagcaaactcagaaaatgcatgacactctttccatctacacgccaatcaccattagtagcttgaatattgg |
14376453 |
T |
|
| Q |
201 |
tatatattttaaataactatttttctatggagcccat |
237 |
Q |
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|||| |||||||||||||||||||||||||||||||| |
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| T |
14376452 |
tataaattttaaataactatttttctatggagcccat |
14376416 |
T |
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