View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_high_118 (Length: 257)

Name: NF19103_high_118
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_high_118
NF19103_high_118
[»] chr7 (42 HSPs)
chr7 (9-244)||(43461494-43461728)
chr7 (40-240)||(43457611-43457816)
chr7 (46-212)||(48788479-48788646)
chr7 (46-192)||(7258424-7258574)
chr7 (46-212)||(35727847-35728017)
chr7 (46-199)||(42477529-42477686)
chr7 (40-218)||(12223485-12223659)
chr7 (40-138)||(32793334-32793432)
chr7 (46-212)||(10898877-10899047)
chr7 (46-216)||(45584297-45584470)
chr7 (46-191)||(44333286-44333435)
chr7 (47-197)||(7509271-7509426)
chr7 (45-196)||(44334278-44334425)
chr7 (45-216)||(48647243-48647418)
chr7 (46-199)||(48646198-48646355)
chr7 (55-143)||(2677094-2677182)
chr7 (47-147)||(5929982-5930082)
chr7 (39-146)||(33607368-33607475)
chr7 (46-216)||(30924817-30924983)
chr7 (43-194)||(34710213-34710360)
chr7 (45-195)||(39708277-39708423)
chr7 (40-131)||(8048653-8048744)
chr7 (54-145)||(24934954-24935045)
chr7 (165-240)||(44529560-44529635)
chr7 (92-199)||(12221496-12221607)
chr7 (47-120)||(8870149-8870222)
chr7 (46-199)||(35728911-35729060)
chr7 (43-138)||(44529172-44529270)
chr7 (46-147)||(7259558-7259658)
chr7 (46-154)||(48777406-48777514)
chr7 (55-147)||(24935566-24935657)
chr7 (54-218)||(34707777-34707938)
chr7 (40-199)||(6680338-6680493)
chr7 (169-234)||(44530427-44530492)
chr7 (48-146)||(46286674-46286772)
chr7 (47-120)||(8870907-8870980)
chr7 (46-147)||(10894492-10894592)
chr7 (97-218)||(45583794-45583911)
chr7 (48-120)||(24287651-24287723)
chr7 (49-147)||(384991-385088)
chr7 (48-125)||(24288741-24288818)
chr7 (165-198)||(32794613-32794646)
[»] chr4 (19 HSPs)
chr4 (40-218)||(20599692-20599866)
chr4 (43-239)||(4702976-4703174)
chr4 (46-146)||(19050405-19050505)
chr4 (49-212)||(4701935-4702102)
chr4 (46-212)||(54574574-54574744)
chr4 (46-212)||(47878288-47878458)
chr4 (46-147)||(42278198-42278299)
chr4 (54-143)||(26685321-26685410)
chr4 (123-212)||(42278807-42278900)
chr4 (51-147)||(42391759-42391855)
chr4 (143-218)||(6039367-6039446)
chr4 (48-120)||(21621994-21622066)
chr4 (48-120)||(32244445-32244517)
chr4 (40-144)||(56041127-56041227)
chr4 (48-106)||(32244582-32244640)
chr4 (67-147)||(26170830-26170913)
chr4 (48-116)||(21623001-21623069)
chr4 (49-85)||(25810348-25810384)
chr4 (46-110)||(50694898-50694962)
[»] chr2 (34 HSPs)
chr2 (42-231)||(17330004-17330197)
chr2 (40-232)||(7073793-7073990)
chr2 (46-212)||(39015154-39015324)
chr2 (46-199)||(40000152-40000309)
chr2 (44-146)||(43380734-43380836)
chr2 (46-216)||(32765086-32765260)
chr2 (46-199)||(24459271-24459428)
chr2 (46-201)||(31091342-31091501)
chr2 (46-216)||(24458209-24458383)
chr2 (40-147)||(7412255-7412362)
chr2 (46-216)||(14704154-14704320)
chr2 (46-216)||(2910249-2910423)
chr2 (46-212)||(2911291-2911461)
chr2 (49-143)||(31442503-31442597)
chr2 (40-138)||(33161931-33162029)
chr2 (46-216)||(39016192-39016357)
chr2 (46-146)||(17466683-17466782)
chr2 (54-160)||(5914872-5914978)
chr2 (63-144)||(21732281-21732362)
chr2 (46-146)||(43381045-43381145)
chr2 (57-216)||(31090317-31090480)
chr2 (64-144)||(21733627-21733707)
chr2 (49-160)||(31443085-31443196)
chr2 (48-101)||(12746100-12746153)
chr2 (48-129)||(34037544-34037625)
chr2 (54-138)||(12396162-12396246)
chr2 (40-95)||(17466204-17466259)
chr2 (165-199)||(33162037-33162071)
chr2 (165-199)||(38984810-38984844)
chr2 (168-218)||(39256812-39256862)
chr2 (72-147)||(39999125-39999197)
chr2 (48-120)||(14887378-14887450)
chr2 (40-76)||(31814268-31814304)
chr2 (48-120)||(37607273-37607345)
[»] scaffold0767 (2 HSPs)
scaffold0767 (40-218)||(6031-6210)
scaffold0767 (49-213)||(5769-5922)
[»] chr1 (31 HSPs)
chr1 (47-218)||(6612580-6612755)
chr1 (49-216)||(52439613-52439784)
chr1 (40-145)||(25038044-25038149)
chr1 (40-145)||(25043256-25043361)
chr1 (40-218)||(51450163-51450345)
chr1 (46-236)||(34085691-34085870)
chr1 (46-216)||(7944304-7944474)
chr1 (40-199)||(22857375-22857539)
chr1 (46-154)||(9340891-9340999)
chr1 (50-199)||(52440377-52440530)
chr1 (48-147)||(6613840-6613939)
chr1 (46-216)||(32665577-32665744)
chr1 (49-146)||(11830061-11830158)
chr1 (40-138)||(22856843-22856939)
chr1 (41-146)||(3117813-3117918)
chr1 (46-147)||(9339795-9339896)
chr1 (52-126)||(1001326-1001400)
chr1 (46-199)||(32664652-32664808)
chr1 (54-165)||(5782551-5782662)
chr1 (49-143)||(39977504-39977598)
chr1 (50-84)||(1001818-1001852)
chr1 (49-147)||(16249815-16249913)
chr1 (49-147)||(26518261-26518359)
chr1 (90-160)||(51453579-51453649)
chr1 (51-120)||(1407802-1407871)
chr1 (45-118)||(7945456-7945529)
chr1 (48-120)||(534428-534500)
chr1 (165-199)||(22856955-22856989)
chr1 (54-120)||(44719527-44719593)
chr1 (48-125)||(11059787-11059864)
chr1 (165-218)||(23703959-23704012)
[»] chr5 (34 HSPs)
chr5 (46-212)||(8075638-8075807)
chr5 (46-216)||(40612459-40612633)
chr5 (46-199)||(25590579-25590736)
chr5 (46-199)||(40611409-40611566)
chr5 (45-212)||(32640436-32640607)
chr5 (46-216)||(2464818-2464992)
chr5 (49-147)||(578625-578723)
chr5 (46-194)||(2466595-2466747)
chr5 (46-240)||(9537191-9537382)
chr5 (46-212)||(28590916-28591087)
chr5 (46-216)||(8074599-8074773)
chr5 (46-147)||(32641600-32641700)
chr5 (46-215)||(14889918-14890091)
chr5 (52-155)||(34173435-34173538)
chr5 (50-147)||(18004811-18004908)
chr5 (46-154)||(14891013-14891121)
chr5 (46-160)||(544797-544911)
chr5 (46-212)||(545848-546010)
chr5 (46-216)||(4593010-4593177)
chr5 (54-133)||(12445284-12445363)
chr5 (46-153)||(28589848-28589955)
chr5 (90-148)||(2314386-2314444)
chr5 (127-218)||(9537853-9537948)
chr5 (42-104)||(9537945-9538007)
chr5 (55-120)||(13651041-13651106)
chr5 (49-118)||(37072730-37072799)
chr5 (64-120)||(16611875-16611931)
chr5 (48-120)||(19183112-19183184)
chr5 (62-121)||(31946932-31946991)
chr5 (165-216)||(32641543-32641594)
chr5 (40-138)||(18400341-18400439)
chr5 (48-146)||(21069460-21069557)
chr5 (48-85)||(32555461-32555498)
chr5 (167-199)||(27720733-27720765)
[»] chr3 (26 HSPs)
chr3 (46-202)||(2591774-2591935)
chr3 (45-194)||(55389291-55389444)
chr3 (46-192)||(48809479-48809629)
chr3 (46-194)||(48573134-48573286)
chr3 (46-212)||(36280121-36280291)
chr3 (46-212)||(48574263-48574433)
chr3 (46-192)||(53958925-53959074)
chr3 (46-212)||(17700668-17700838)
chr3 (45-216)||(36279100-36279267)
chr3 (57-197)||(36827282-36827418)
chr3 (46-216)||(52318125-52318291)
chr3 (45-147)||(53957821-53957923)
chr3 (49-216)||(55388211-55388384)
chr3 (46-147)||(48808521-48808622)
chr3 (39-147)||(20464231-20464339)
chr3 (54-146)||(47428457-47428549)
chr3 (54-145)||(19114670-19114760)
chr3 (67-158)||(33837333-33837424)
chr3 (59-146)||(45599046-45599133)
chr3 (40-120)||(612377-612457)
chr3 (54-138)||(33427888-33427972)
chr3 (64-144)||(3693996-3694076)
chr3 (54-146)||(33428329-33428421)
chr3 (54-165)||(19115022-19115133)
chr3 (165-212)||(52317186-52317233)
chr3 (54-147)||(47117945-47118037)
[»] chr8 (25 HSPs)
chr8 (40-198)||(5737831-5737983)
chr8 (46-216)||(32898245-32898419)
chr8 (40-218)||(5737005-5737187)
chr8 (40-199)||(28619349-28619512)
chr8 (49-138)||(8569560-8569649)
chr8 (46-212)||(35178609-35178779)
chr8 (46-216)||(1952778-1952944)
chr8 (46-216)||(10407384-10407558)
chr8 (45-146)||(41122616-41122717)
chr8 (54-199)||(35177551-35177700)
chr8 (40-240)||(5965198-5965402)
chr8 (40-160)||(32564349-32564469)
chr8 (46-212)||(10406355-10406510)
chr8 (48-147)||(39138517-39138616)
chr8 (40-138)||(41121268-41121366)
chr8 (48-105)||(12637656-12637713)
chr8 (48-120)||(9626341-9626413)
chr8 (167-218)||(32564279-32564330)
chr8 (168-199)||(41121377-41121408)
chr8 (48-147)||(45476416-45476515)
chr8 (168-218)||(32563848-32563898)
chr8 (48-120)||(24199101-24199174)
chr8 (48-120)||(28524929-28525001)
chr8 (48-120)||(41754139-41754211)
chr8 (51-127)||(45476336-45476412)
[»] scaffold0039 (1 HSPs)
scaffold0039 (40-160)||(79236-79356)
[»] chr6 (5 HSPs)
chr6 (40-194)||(31239789-31239947)
chr6 (48-120)||(30748161-30748233)
chr6 (49-102)||(24621249-24621302)
chr6 (49-101)||(5265370-5265422)
chr6 (55-147)||(19600098-19600189)
[»] scaffold0016 (1 HSPs)
scaffold0016 (72-145)||(36400-36473)
[»] scaffold0369 (1 HSPs)
scaffold0369 (49-146)||(8672-8768)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 4e-90; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 9 - 244
Target Start/End: Complemental strand, 43461728 - 43461494
Alignment:
Q  9 ttattctgctaagtgatgatgatgtggcacaacatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaa 108  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  43461728 ttattctactaagtgatgatgatgtggcacaacatggcatatgaggtgtcacatgaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaa 43461629  T
Q  109 aactcaatatccataaattgaatctcaaattcctaaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaa 208  Q
    || ||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||    
T  43461628 aaatcaatatccctcaattgaatctcaaatccctaaatcactaaatctcaaacccctgtcatctaattctct-tttcgttcaaaatcaatcatccattaa 43461530  T
Q  209 acaccaacttcattttaaatccttgactgtgctttc 244  Q
    |||||||||||||||||||||||| ||||| |||||    
T  43461529 acaccaacttcattttaaatcctttactgttctttc 43461494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 40 - 240
Target Start/End: Original strand, 43457611 - 43457816
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||| | |||||| ||||||| |||||| ||||||||| |||||||||||||||||     
T  43457611 acatggcatatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctga-ccaaaaatcaatatccctaaattgaatctcaaatc 43457709  T
Q  140 cctaaatcactaaatctcaaacccctg----tcatctaattctc--tcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttg 233  Q
    | |||||||| |||||||||||||||     |||||||||||||  |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||    
T  43457710 cttaaatcaccaaatctcaaacccctaaatatcatctaattctctctcttttgttcaaaatcaatcatcaattaaacaccaactttattttaagtccttg 43457809  T
Q  234 actgtgc 240  Q
    |||||||    
T  43457810 actgtgc 43457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 48788646 - 48788479
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| || ||||||||| |||||||||||||    
T  48788646 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaaa 48788547  T
Q  146 tcactaaatctcaaa-cccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |   ||||||||||| ||| |||||| ||||||||||||||||||||||| |||| ||  ||||||||    
T  48788546 ttcttaaatctcaaatcccttgtcatttaattctctcttttgttcaaaattaatcttccattaaacac 48788479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 192
Target Start/End: Original strand, 7258424 - 7258574
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  7258424 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 7258523  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaa 192  Q
    ||  ||||||||||| |||    ||||||||||||||||||||||||||||    
T  7258524 tccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaa 7258574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 35727847 - 35728017
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| ||| |||| |||||| | |||||||||| | |||||||| ||||||| |  ||||||||| ||||||| |||||    
T  35727847 catatgaggtgtcacagggaccaaagtgatagtagaaaatggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaatttctaaa 35727946  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |  |||||||||||| |||    |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  35727947 ttcctaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 35728017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 42477529 - 42477686
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||||| |||||| ||||||||||||||   ||||| |  | ||||||| |||||||||||||    
T  42477529 catatgaggtgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaaa 42477628  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    |   ||||||||||| |||    |||||||||||||||||||||||||||||| ||||    
T  42477629 tacttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaattaatc 42477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 12223659 - 12223485
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    |||||||||||||| ||||||| | |||||| ||||||||||||||  | |||||||||| |||||||||| |||||||||  ||||||||||||||||     
T  12223659 acatgacatatgagttgtcacaggaactaaagtgaaagtaaaaaattgtcactttgatccttgaaccaaaaatcaatatccccaaattgaatctcaaatc 12223560  T
Q  140 cctaaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||  | ||  |  |||    ||||||||||||  |||||| |||||||||||||| ||  ||||||||||||||    
T  12223559 cctaaatttcaaatccataaa----tgtcatctaattacctctttagttcaaaatcaatcttccattaaacaccaactt 12223485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 32793334 - 32793432
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||| | |||| |||||||| ||||| | ||||||| |||| ||||||||||||    
T  32793334 acatgacatgtgaggtgtcacatggactaaagtgaaagtaaaaaatgatcattttggtccctgaatcaaaaatgaatatccctaaaatgaatctcaaat 32793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 10899047 - 10898877
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| |||  ||||||| |||||| | |||||| ||| |||||||||| ||||||| |  ||||||||| |||||||||||||    
T  10899047 catatgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 10898948  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |   || |||||||| |||    ||||||||||||||||| |||||||||||| |||| ||  ||||||||    
T  10898947 ttcttacatctcaaatccctaaatgtcatctaattctctcatttgttcaaaattaatcttccattaaacac 10898877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 45584470 - 45584297
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||| ||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  45584470 catatgaggtgtcataaggaccaaagtgaatgtagaaaatggtcactttggtccctgaaccaaaa-tcaatattcccaaattgaatatcaaattcctaaa 45584372  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||||||||| |||    |||||||||||| ||| ||||| |||||||||||| ||  ||||||| ||||    
T  45584371 tccttaaatctcaaatccctaaatgtcatctaattatcttttttgatcaaaatcaatcttccattaaacatcaac 45584297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 46 - 191
Target Start/End: Original strand, 44333286 - 44333435
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||  |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  44333286 catatgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 44333385  T
Q  146 tcactaaatctcaaacccctg----tcatctaattctctcttttgttcaa 191  Q
    ||  ||||||||||| ||||     ||| ||||||||||| |||||||||    
T  44333386 tccttaaatctcaaatccctaaatttcaactaattctctcatttgttcaa 44333435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 197
Target Start/End: Complemental strand, 7509426 - 7509271
Alignment:
Q  47 atatgaggtgtcacatggactaaaatgaaagta-aaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||| |||||| |||||||||| |||||||| ||||||  | |||||| ||||| |||||||| |||||||||  |||||||||||||||| ||||||    
T  7509426 atatgatgtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaaa 7509327  T
Q  146 tcactaaatctcaaacccctg----tcatctaattctctcttttgttcaaaatcaa 197  Q
     | |||||||||||| ||||     |||| |||||| |||| ||||||||||||||    
T  7509326 cccctaaatctcaaatccctaaatatcatttaattcactctcttgttcaaaatcaa 7509271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 196
Target Start/End: Complemental strand, 44334425 - 44334278
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||||| |||||||||||| ||| |||||||| |||||  | |||||| ||| |||||||||| |||||||||  ||||||||| |||||| |||||    
T  44334425 acatatgagatgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 44334326  T
Q  145 atcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatca 196  Q
    |||   || ||| |||    |||||||||||| |||||||||||||||||||    
T  44334325 atcttaaattcttaaa----tgtcatctaattatctcttttgttcaaaatca 44334278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 216
Target Start/End: Complemental strand, 48647418 - 48647243
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||||||||||||| |||| ||| |||||||| |||||| | |||||  |||||||||||||| ||||||| |  |||||||||  ||||| ||||     
T  48647418 acatatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatccctat 48647319  T
Q  145 atcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||| |||||||| ||| ||     | |||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  48647318 atccctaaatcttaaatccttaaatatcatctaattatctattttgttcaaaatcaatcttccattaaacaccaac 48647243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 48646198 - 48646355
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||| ||||||||||  ||| ||| ||||||||||||||| | |||||| ||| |||||||||| | |||||   |||||||||| |||||||||||||    
T  48646198 catataaggtgtcacagagaccaaagtgaaagtaaaaaatggtcactttg-tccttgaaccaaaaattaatatttctaaattgaatatcaaattcctaaa 48646296  T
Q  146 tcactaaatctcaaacccc----tgtcatc-taattctctcttttgttcaaaatcaatc 199  Q
    || |||||||||||| |||    ||||||| ||||||||| ||||||||||||| ||||    
T  48646297 tccctaaatctcaaatccctaaatgtcatcttaattctcttttttgttcaaaattaatc 48646355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 2677094 - 2677182
Alignment:
Q  55 tgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattccta 143  Q
    |||||||||||||||| |||||||| |||||||| |||||| ||||||||| |||| ||||||||| |||||| |||||||||| ||||    
T  2677094 tgtcacatggactaaagtgaaagtagaaaatgatcactttgttccctgaactaaaaatcaatatccctaaattaaatctcaaatcccta 2677182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 5930082 - 5929982
Alignment:
Q  47 atatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||| | ||||| ||||||| |  ||||||||||||||||  ||||||    
T  5930082 atatgaggtgtcacatagactaaagtgaaagttaaaaatgatcactttgatccctggatcaaaaatcaatattcccaaattgaatctcaaatctctaaat 5929983  T
Q  147 c 147  Q
    |    
T  5929982 c 5929982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 33607475 - 33607368
Alignment:
Q  39 aacatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    |||||| |||||||||||||| |||||||||| |||||||||||| || | |||||| ||| || ||||||| |||||||||  ||||||||||| ||||    
T  33607475 aacatggcatatgaggtgtcaaatggactaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaat 33607376  T
Q  139 tcctaaat 146  Q
     |||||||    
T  33607375 ccctaaat 33607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 30924983 - 30924817
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||  ||  ||| |||||||| |||||| | |||||||||  |||||||||| |||||||||  ||||||||| |||||| ||||||    
T  30924983 catatgaggtgtcacagtgatcaaagtgaaagtagaaaatggtcactttgatctatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 30924884  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||    |||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  30924883 tc-ttaaatccttaaa----tgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 30924817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 34710360 - 34710213
Alignment:
Q  43 tgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcct 142  Q
    |||||| ||| ||||||||  ||||||| ||||||||||||||  ||||||||||||||||| ||||| |||| ||||  ||||||||| | ||| ||||    
T  34710360 tgacatttgatgtgtcacagagactaaagtgaaagtaaaaaattgttactttgatccctgaatcaaaaatcaacatcctcaaattgaattttaaaatcct 34710261  T
Q  143 aaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaat 194  Q
    ||||  | ||  || |||    ||||||||||||||||||||||||||||||    
T  34710260 aaatttcaaatccttaaa----tgtcatctaattctctcttttgttcaaaat 34710213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 195
Target Start/End: Original strand, 39708277 - 39708423
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||||| ||||||||||||||  | |||||||| |||||| | ||||||  |||| |||||||| ||||||| |  ||||||||| |||||| |||||    
T  39708277 acatatgatgtgtcacatggactgtagtgaaagtagaaaatggtcactttggaccctaaaccaaaaatcaatattctcaaattgaatttcaaatccctaa 39708376  T
Q  145 atcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatc 195  Q
    |||   || ||| |||    |||||||||||||||||||||||||||||||    
T  39708377 atcttaaattcttaaa----tgtcatctaattctctcttttgttcaaaatc 39708423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 8048744 - 8048653
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaat 131  Q
    |||| |||||||| ||||||||||||||||| |||||||| |||||| | |||||| |||||||||| ||| | |||||||| |||||||||    
T  8048744 acataacatatgatgtgtcacatggactaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaattaatatccacaaattgaat 8048653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 24934954 - 24935045
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||| |||||| |||||||| |||||| | |||||||||||| |||| ||| ||||||| | ||||||||||||||||| ||||||    
T  24934954 gtgtcacatgaactaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaaa 24935045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 44529560 - 44529635
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttgactgtgc 240  Q
    |||||||||||| |||||||||||||||||||||||||  ||||| | |||||||||||||| ||| |||||||||    
T  44529560 tgtcatctaattatctcttttgttcaaaatcaatcatccattaaaaatcaacttcattttaagtccctgactgtgc 44529635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 92 - 199
Target Start/End: Original strand, 12221496 - 12221607
Alignment:
Q  92 tttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaatctcaaacccc----tgtcatctaattctctcttttgt 187  Q
    |||| |||||||||||||  |||||||||  ||||||||| ||||||| ||||||| |||||||||||  | |    |||||||||||||||||||||||    
T  12221496 tttggtccctgaaccaaagatcaatatccccaaattgaatatcaaatttctaaatccctaaatctcaattctctaaatgtcatctaattctctcttttgt 12221595  T
Q  188 tcaaaatcaatc 199  Q
    ||||||| ||||    
T  12221596 tcaaaattaatc 12221607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 8870149 - 8870222
Alignment:
Q  47 atatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||| ||||||||| |||| || ||||||    
T  8870149 atatgaggtgtcacaaagactaaaatgaaagtagaaaatgattactttggtccctgaactaaaaatcgatatcc 8870222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 35729060 - 35728911
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||| | |||||| ||| |||||||| ||| || | |||||| |||||||||||||| ||||||| |  ||||||||| | |||| ||||||    
T  35729060 catatgaggtgttatatggaccaaagtgaaagtagaaagtggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatattaaatccctaaa 35728961  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||| || |||    |||||||||||| ||||||||||||||||||||||    
T  35728960 tc-ttaaatccttaaa----tgtcatctaattatctcttttgttcaaaatcaatc 35728911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 44529172 - 44529270
Alignment:
Q  43 tgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaacc----aaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||| | ||||||| |||||||||    |||| |||||||||  ||||||||||||||||    
T  44529172 tgacatatgaggtgtcacaaggactaaagtgaaagt-aaaaatggtcactttgacccctgaaccaattaaaaatcaatatcctcaaattgaatctcaaat 44529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 7259658 - 7259558
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| ||||| || |||||| | |||||| |||||||||||||| | |||||||  ||||||||| |||||| ||||||    
T  7259658 catatgaggtgtcacaaggaccaaagtgaaa-tagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccctaaa 7259560  T
Q  146 tc 147  Q
    ||    
T  7259559 tc 7259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 154
Target Start/End: Original strand, 48777406 - 48777514
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatat-ccataaattgaatctcaaattcctaa 144  Q
    |||||||||||||||| |||| ||| ||||| || |||||| | |||||||| |||||||||||| ||||||| ||  ||||||||| |||||| |||||    
T  48777406 catatgaggtgtcacagggaccaaagtgaaaatagaaaatggtcactttgattcctgaaccaaaa-tcaatatccccaaaattgaatttcaaatccctaa 48777504  T
Q  145 atcactaaat 154  Q
    ||| ||||||    
T  48777505 atccctaaat 48777514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 24935657 - 24935566
Alignment:
Q  55 tgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||| |||||||| |||||||||||||   | |||||||||||||||| |||| || |||||   |||||||||||||||||||||||||    
T  24935657 tgtcacaaggactaaagtgaaagtaaaaaaatgtcactttgatccctgaactaaaaatc-atatcaccaaattgaatctcaaattcctaaatc 24935566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 218
Target Start/End: Original strand, 34707777 - 34707938
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaa 153  Q
    |||||||| ||| |||| ||||| || |||||||  |||||| ||| || ||||||| | |||||||  || |||||| |||||| |||||||| | ||     
T  34707777 gtgtcacagggaataaagtgaaaatagaaaatgaacactttgttccatggaccaaaaattaatatccccaagttgaatttcaaatccctaaatctcaaat 34707876  T
Q  154 tctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcat-cacttaaacaccaactt 218  Q
    ||| |||    |||||| |||||||||||||||||||||||||||  | || ||||||||||||||    
T  34707877 tcttaaa----tgtcatataattctctcttttgttcaaaatcaattttccatttaaacaccaactt 34707938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 6680493 - 6680338
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||  ||| |||||| | |||||||| |||||||| |||||  | | |||  ||||| |||||||| |||||||||  ||||||||| | |||||    
T  6680493 acatgacaattgatgtgtcaaagggactaaagtgaaagtagaaaatagtcattttagtccctaaaccaaaaatcaatatccccaaattgaattttaaatt 6680394  T
Q  140 cctaaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    | |||||| | ||||| | ||    | |||||||||||||||||||||||||||||||||    
T  6680393 cataaatctc-aaatccctaaa---tatcatctaattctctcttttgttcaaaatcaatc 6680338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 44530492 - 44530427
Alignment:
Q  169 atctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttga 234  Q
    |||||||||||||||| ||||||||||||||||   ||||| ||||||||||||||| ||| ||||    
T  44530492 atctaattctctctttcgttcaaaatcaatcattcattaaaaaccaacttcattttagatctttga 44530427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 46286674 - 46286772
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||| |||| |||| ||| |||||||||||| |||||  | |||||||||| |||||||||| ||||||| |  ||||| ||| |||||| |||||||    
T  46286674 tatgatgtgttacattgaccaaaatgaaagtagaaaatagtcactttgatccttgaaccaaaaatcaatattcccaaattaaatttcaaatccctaaat 46286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 8870980 - 8870907
Alignment:
Q  47 atatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||||||   ||||||||||||||| |||||| |||||||| ||||||||| |||| || ||||||    
T  8870980 atatgtggtgtcacaaaaactaaaatgaaagtagaaaatggttactttggtccctgaactaaaaatcgatatcc 8870907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 10894492 - 10894592
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||| ||||||||||||| || ||| |||||||| |||||| | |||||  |||||| ||||||| || ||||||  ||||||||| |||||| ||||||    
T  10894492 catacgaggtgtcacatgcaccaaagtgaaagtagaaaatggtcactttagtccctggaccaaaaatc-atatccccaaattgaatatcaaatccctaaa 10894590  T
Q  146 tc 147  Q
    ||    
T  10894591 tc 10894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 218
Target Start/End: Original strand, 45583794 - 45583911
Alignment:
Q  97 tccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatc 195  Q
    |||||||||||||| |||||||||  ||||||||| |||||| ||||||||  ||||| ||  ||    |||||||||||| ||| ||||| ||||||||    
T  45583794 tccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc-ttaaatcctttaa----tgtcatctaattatcttttttgatcaaaatc 45583888  T
Q  196 aatcatcacttaaacaccaactt 218  Q
    |||| ||  ||||||||||||||    
T  45583889 aatcttccattaaacaccaactt 45583911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 24287651 - 24287723
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||||||| |||||||| |||||||| |||||| |  ||||  |||||||||||||| | |||||||    
T  24287651 tatgaggtgtcacagggactaaagtgaaagtagaaaatggtcgctttagtccctgaaccaaaaatgaatatcc 24287723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 384991 - 385088
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||||||||||| | ||||||| |||||||| |||||  | |||||||||  |||| | ||| |||||||||  ||||| |||||||||||| ||||||    
T  384991 atgaggtgtcacgttgactaaagtgaaagtagaaaattgtcactttgatctatgaatcgaaaatcaatatcc-caaattaaatctcaaattcttaaatc 385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 24288818 - 24288741
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaa 125  Q
    ||||| |||| |||||||||||||| |||||| |||||| | | |||||||| |||||| ||| | ||||||| ||||    
T  24288818 tatgatgtgtgacatggactaaaataaaagtagaaaatggtaattttgatccttgaaccgaaaataaatatccctaaa 24288741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 198
Target Start/End: Complemental strand, 32794646 - 32794613
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaat 198  Q
    ||||||||||| ||||||||||||||||||||||    
T  32794646 tgtcatctaatgctctcttttgttcaaaatcaat 32794613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 20599866 - 20599692
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||||||||| | ||||| |  |||||||||||||||||    
T  20599866 acatgacatatgaggtgtcacagggactaaaatgaaagtaaaaaatggtcactttggtccctgaaccaaaaattaatattcccaaattgaatctcaaatt 20599767  T
Q  140 cctaaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||| | ||||||| ||    ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  20599766 cctaaatcgc-aaatctctaa---atgtcatctaattctctcttttgttcaaaatcaatcttccattaaacaccaactt 20599692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 43 - 239
Target Start/End: Complemental strand, 4703174 - 4702976
Alignment:
Q  43 tgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcct 142  Q
    ||||||||||| ||||| |||||||||| |||||||| |||||  | |||||| ||||||| |||||| |||||||||  ||||||||||||||||  ||    
T  4703174 tgacatatgagatgtcatatggactaaagtgaaagtataaaattgtcactttggtccctgacccaaaaatcaatatccccaaattgaatctcaaatctct 4703075  T
Q  143 aaatcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttgactgt 238  Q
     ||||||||||||||||| |||    |||||| ||||  |||||||||||||||||||||| ||  ||||||| ||||||  | ||| |||| |||||||    
T  4703074 gaatcactaaatctcaaatccctaaatgtcatttaat--tctcttttgttcaaaatcaatcttccattaaacatcaacttactgttatatccctgactgt 4702977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 19050405 - 19050505
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||||||||||| |||||||| |||||||| |||||| ||| |||| ||||| ||||||||| ||||||||||||||||| ||||||    
T  19050405 catatgaggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaaa 19050504  T
Q  146 t 146  Q
    |    
T  19050505 t 19050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 212
Target Start/End: Original strand, 4701935 - 4702102
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||| ||||||||||||||||| |||||||| |||||  | |||||| |||||||| ||||| |||||||||  ||||||||||||||||  |||||||     
T  4701935 atgaagtgtcacatggactaaagtgaaagtagaaaatagtcactttggtccctgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaaatcc 4702034  T
Q  149 ctaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||| |||||||| |||    |||||| ||||||||| |||||||||||| ||||| ||  ||||||||    
T  4702035 ctagatctcaaatccctacatgtcatttaattctctattttgttcaaaaacaatcttccattaaacac 4702102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 54574574 - 54574744
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||  ||||  || |||||||| |||||||| ||||||||||| ||||||||| |||| || |  ||||||||| ||||||||||||     
T  54574574 catatgaggtgtcacggggaccgaagtgaaagtagaaaatgatcactttgatccccgaaccaaaaatcaaaattctcaaattgaatatcaaattcctaac 54574673  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||  ||||||||||| |||    |||||||||||||||||||| ||||||||| |||| ||  ||||||||    
T  54574674 tccttaaatctcaaatccctaaatgtcatctaattctctctttagttcaaaattaatcttccattaaacac 54574744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 47878458 - 47878288
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  47878458 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaa 47878359  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |   |||||| |||| |||    | |||||||||||||||||||| ||||||| |||| ||  ||||||||    
T  47878358 ttcttaaatcacaaatccctaaatctcatctaattctctcttttgctcaaaattaatcttccattaaacac 47878288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 42278198 - 42278299
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| ||||| || |||||| | |||||| |||||||||||||| |||||||||  ||||||||| |||||| ||||||    
T  42278198 catatgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 42278297  T
Q  146 tc 147  Q
    ||    
T  42278298 tc 42278299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 26685410 - 26685321
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattccta 143  Q
    |||||||| ||||||||||||||||| |||||  | | ||| ||||||||||||||| ||||||| ||||| ||||||||||||| ||||    
T  26685410 gtgtcacagggactaaaatgaaagtagaaaatagtcagtttaatccctgaaccaaaaatcaatattcataacttgaatctcaaatcccta 26685321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 123 - 212
Target Start/End: Complemental strand, 42278900 - 42278807
Alignment:
Q  123 aaattgaatctcaaattcctaaatcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||||||||| ||||||| |||||||  ||||||||||| ||||    ||||| ||||||||||||||||||||||| |||| ||  ||||||||    
T  42278900 aaattgaatatcaaatttctaaatccttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatcttccattaaacac 42278807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 147
Target Start/End: Complemental strand, 42391855 - 42391759
Alignment:
Q  51 gaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||||||||||||||||||| |||||||| |||||| | |||||  ||||||||| |||| |  |||||   ||||||| |||||||| ||||||||    
T  42391855 gaggtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaactaaaaattcatatcttcaaattgagtctcaaatccctaaatc 42391759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 143 - 218
Target Start/End: Original strand, 6039367 - 6039446
Alignment:
Q  143 aaatcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    ||||||||| |||||||| ||||    ||||| |||||||||||||||||||||||||||| ||  ||||||| ||||||    
T  6039367 aaatcactagatctcaaatccctaaatgtcatataattctctcttttgttcaaaatcaatcttccattaaacatcaactt 6039446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 21621994 - 21622066
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||||| | |||||| |||||||| |||||| | |||||||| ||||||||||||  ||||||||    
T  21621994 tatgatgtgtcacaagcactaaagtgaaagtataaaatggtcactttgattcctgaaccaaaaaccaatatcc 21622066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 32244445 - 32244517
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||| |||||||||  ||||||| ||||||||||||||| | ||||||||| ||| ||| ||| |||||||||    
T  32244445 tatggggtgtcacagagactaaagtgaaagtaaaaaatggtcactttgatctctgcaccgaaaatcaatatcc 32244517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 56041127 - 56041227
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||||| |||||||   |||  |||||| ||||||||||| | |||||    ||||||| |||| |||||||||| ||||||||| ||||||     
T  56041127 acatgacatatgaagtgtcactaagacctaaatgagagtaaaaaatgttcacttt----cctgaactaaaaatcaatatccacaaattgaatttcaaatc 56041222  T
Q  140 cctaa 144  Q
    |||||    
T  56041223 cctaa 56041227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 32244640 - 32244582
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaacc 106  Q
    ||||||||||||||  ||||||| ||||||||||||||  ||||||||||  |||||||    
T  32244640 tatgaggtgtcacagtgactaaagtgaaagtaaaaaattgttactttgatttctgaacc 32244582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 147
Target Start/End: Original strand, 26170830 - 26170913
Alignment:
Q  67 taaaatgaaagtaaaaaatgat---tactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||||  ||||||||||||   |||||||||||||||||| ||| ||||||| |  ||||||||| | |||| ||||||||    
T  26170830 taaaatgactgtaaaaaatgatcactactttgatccctgaaccgaaaatcaatattcccaaattgaatttgaaatccctaaatc 26170913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 21623069 - 21623001
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaat 116  Q
    ||||||||||||||  |||||||||||||||| |||||| | |||||| ||  |||||| ||| |||||    
T  21623069 tatgaggtgtcacagagactaaaatgaaagtagaaaatggtcactttgctctatgaaccgaaaatcaat 21623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 25810384 - 25810348
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaat 85  Q
    |||||||||||||||||||||| |||||||| |||||    
T  25810384 atgaggtgtcacatggactaaagtgaaagtataaaat 25810348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 50694898 - 50694962
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaa 110  Q
    |||||||||||||||| |||  |||||||||||| |||||  | ||||| ||||||||| |||||    
T  50694898 catatgaggtgtcacagggatcaaaatgaaagtagaaaattgtcactttaatccctgaatcaaaa 50694962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 42 - 231
Target Start/End: Complemental strand, 17330197 - 17330004
Alignment:
Q  42 atgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcc 141  Q
    ||||||||||||||||||||  ||||||| ||||||||||||||| | |||||| |||||||||| ||| ||||||||| |||||||||||||||||       
T  17330197 atgacatatgaggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatcat 17330098  T
Q  142 taaatcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatcct 231  Q
    |||||| |||||| |||||||||    |||||| |||||||||||||||||||||| ||| ||||  |||||||||||||||||||||| ||||    
T  17330097 taaatccctaaatttcaaacccctgaatgtcatataattctctcttttgttcaaaaccaagcatccattaaacaccaacttcattttaagtcct 17330004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 40 - 232
Target Start/End: Original strand, 7073793 - 7073990
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaact-caatatccataaattgaatctcaaat 138  Q
    ||||| ||||| |||||||||| ||||||||  |||| ||||||||||| |||||| |||||||||||||| | |||||| | |||||||||||||||||    
T  7073793 acatggcatattaggtgtcacagggactaaagcgaaaataaaaaatgatcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaat 7073892  T
Q  139 tcctaaatcactaaatctcaaacccctg----tcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatcctt 232  Q
     | |||||||||| |||||||| ||||     |||||||||||||||||| |||||||||||||||||  ||||||| |||||| ||||||| |||||    
T  7073893 ccttaaatcactatatctcaaatccctaaatatcatctaattctctctttcgttcaaaatcaatcatccattaaacatcaactttattttaagtcctt 7073990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 39015154 - 39015324
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | | |||| ||| |||||||||| ||||||| |  ||||||||| ||||||||| |||    
T  39015154 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattccaaaa 39015253  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    || |||||||||||| |||    |||||||||||||||||||||||| ||||| |||| ||  ||||||||    
T  39015254 tccctaaatctcaaatccctaaatgtcatctaattctctcttttgtttaaaattaatcttccattaaacac 39015324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 40000309 - 40000152
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||||||| |||||||| |||||| ||| |||||||||| ||||||| |  ||||||||| ||||||| |||||    
T  40000309 catatgaggtgtcagagggaccaaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaatttctaaa 40000210  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||||||||| ||     |||||||||||||||||||||||||||||| ||||    
T  40000209 tccttaaatctcaaatccataagtgtcatctaattctctcttttgttcaaaattaatc 40000152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 146
Target Start/End: Original strand, 43380734 - 43380836
Alignment:
Q  44 gacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattccta 143  Q
    |||||||||||||||||||| |||||| |||||||| |||||| | |||||| |||||||||||||| |||||||||  ||||||||| |||||||||||    
T  43380734 gacatatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaattccta 43380833  T
Q  144 aat 146  Q
    |||    
T  43380834 aat 43380836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 32765086 - 32765260
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||||||| |||||||| |||||| |  ||||| |||||||||||||| |||||||||  ||||||||| |||||| ||||||    
T  32765086 catatgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 32765185  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || |||||| | ||| ||     |||||||||||| ||| |||||||||||||||||| ||  ||||||| ||||    
T  32765186 tccctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacagcaac 32765260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 199
Target Start/End: Complemental strand, 24459428 - 24459271
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||||||| |||||| | ||||||||||||||||||||| ||||||| |  ||||||||| |||||||| ||||    
T  24459428 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaattcgtaaa 24459329  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||||| ||| |||    |||| ||||||| ||||||||||||||||| ||||    
T  24459328 tccttaaatctgaaatccctaaatgtcgtctaattatctcttttgttcaaaattaatc 24459271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 201
Target Start/End: Complemental strand, 31091501 - 31091342
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||  ||| ||| |||||||| |||||| | |||||| ||  |||||||||| ||||||| |  | ||||||| |||||||||||||    
T  31091501 catatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaaa 31091402  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcat 201  Q
    ||  ||||||||||| ||     |||||||||||||||||||||||||||||| ||||||    
T  31091401 tccttaaatctcaaatccgtaaatgtcatctaattctctcttttgttcaaaattaatcat 31091342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 24458209 - 24458383
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| ||||| || ||||| |||||||||  ||||||||| ||| || ||||||    
T  24458209 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaaa 24458308  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || |||||| | ||| ||     |||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  24458309 tccctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 24458383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 7412255 - 7412362
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||| ||||||| |||||||| |||||||| ||||| || |||||| | |||||| ||||| ||||||||  |||||||| |||||||||||||||||     
T  7412255 acatggcatatgatgtgtcacaaggactaaagtgaaaatagaaaatggtcactttgttccctcaaccaaaaaacaatatccctaaattgaatctcaaatc 7412354  T
Q  140 cctaaatc 147  Q
    ||||||||    
T  7412355 cctaaatc 7412362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 14704154 - 14704320
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||  | |||||| ||| |||||||||| |||||||||  ||||||||| |||||| ||||||    
T  14704154 catatgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 14704253  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||    |||||||||||| | | |||||||||||||||||| ||  ||||||||||||    
T  14704254 tc-ttaaatccttaaa----tgtcatctaattatattttttgttcaaaatcaatcttccattaaacaccaac 14704320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 2910249 - 2910423
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||| ||||| |||| |||||||||||  |||||||| |||||| ||| |||||||||| |||||||||  ||||||||| || ||| ||||||    
T  2910249 catatgaggtatcacaaggaccaaaatgaaagtcgaaaatgatcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaaa 2910348  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| ||||| ||     ||||||||| || |||  ||||||||||||||||| |   ||||||||||||    
T  2910349 tccgtaaatttcaaatccttaaatgtcatctagttatcttgtttgttcaaaatcaatcttacattaaacaccaac 2910423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 2911461 - 2911291
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | | || ||| |||||||| |||||  | |||||| || || |||||||| |||||||    ||||||||| |||||||||||||    
T  2911461 catatgaggtgtcataggaaccaaagtgaaagtagaaaattgtcactttggtctcttaaccaaaaatcaatatttccaaattgaatatcaaattcctaaa 2911362  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||  |||||||||||  ||    |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  2911361 tccttaaatctcaaattcctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 2911291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 31442503 - 31442597
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattccta 143  Q
    ||||||||||| | |||||||| ||||||| ||||||||  || ||| |||||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  31442503 atgaggtgtcataaggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatccctaaattgaatctcaaatcccta 31442597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 33161931 - 33162029
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||| ||||||||||||||||  |||||||||||||||| ||||| || |||||  |||||||||||||| || ||||||  |||| |||||||||||    
T  33161931 acatggcatatgaggtgtcacaaagactaaaatgaaagtagaaaatcatcactttagtccctgaaccaaaaatcgatatccccaaatcgaatctcaaat 33162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 39016357 - 39016192
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||||||| ||| |||||||| |||||  | |||||| |||||||||||||| ||||||| |  ||||||||| | |||| ||||||    
T  39016357 catatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatgaaatccctaaa 39016258  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||    |||||||||||| ||| |||||||||||| ||||| ||  ||||||||||||    
T  39016257 tc-ttaaatccttaaa----tgtcatctaattatctattttgttcaaaa-caatcttccattaaacaccaac 39016192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 17466782 - 17466683
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| | |||||| ||||||||||||||| | | |||||||||| |||||||| | ||||||| |||||| ||| |||||| ||||||    
T  17466782 catatgaggtgtcacacgcactaaagtgaaagtaaaaaatggtcaatttgatccct-aaccaaaaattaatatccctaaattaaatttcaaatccctaaa 17466684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 5914978 - 5914872
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaa 153  Q
    ||||||||  ||||||||||||||||||||||  | |||||  |||||||||||||| |||||||||  |  |||||||| ||||  ||||||| |||||    
T  5914978 gtgtcacagagactaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaaatccctaaa 5914879  T
Q  154 tctcaaa 160  Q
    |||||||    
T  5914878 tctcaaa 5914872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 21732281 - 21732362
Alignment:
Q  63 ggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||||| |||||||| |||||| | |||||| |||||||||||||| | |||||||  |||||||||||||||| |||||    
T  21732281 ggactaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatctcaaatccctaa 21732362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 43381145 - 43381045
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||||||| | ||| || |||||  | | |||| |||||||||  ||| ||||||||| ||||||||||||||||| ||||||    
T  43381145 catatgaggtgtcacaaggactaaagtaaaaatagaaaatagtcattttggtccctgaacacaaaatcaatatccctaaattgaatctcaaatccctaaa 43381046  T
Q  146 t 146  Q
    |    
T  43381045 t 43381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 31090317 - 31090480
Alignment:
Q  57 tcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaatct 156  Q
    ||||| |||| ||| |||||||| ||||||    ||||| |||||||||||||| | |||||||  ||||||||| |||||| | |||||| |||||  |    
T  31090317 tcacagggaccaaagtgaaagtagaaaatggccgctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccttaaatccctaaaatt 31090416  T
Q  157 caaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
     ||| || |    ||||||||||| || ||||||||||||||||||| ||  ||||||||||||    
T  31090417 taaatccataaatgtcatctaattatcccttttgttcaaaatcaatcttccattaaacaccaac 31090480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 21733707 - 21733627
Alignment:
Q  64 gactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||| ||||||||||||||| | |||||| || ||||||| ||| ||||||| |  |||||||||||||||| |||||    
T  21733707 gactaaagtgaaagtaaaaaatggtcactttggtctctgaaccgaaaatcaatattcccaaattgaatctcaaatccctaa 21733627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 160
Target Start/End: Complemental strand, 31443196 - 31443085
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||||||||||||  ||||||| |||||||| |||||  | | |||| | |||||||| ||| ||||||||   ||||| |||||||||||||||||||     
T  31443196 atgaggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaattaaatctcaaattcctaaatcc 31443097  T
Q  149 ctaaatctcaaa 160  Q
    ||| ||| ||||    
T  31443096 ctatatcccaaa 31443085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 12746153 - 12746100
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccct 101  Q
    |||||||||||||| |||||||| |||||||| |||||||| | ||||||||||    
T  12746153 tatgaggtgtcacagggactaaagtgaaagtagaaaatgatcattttgatccct 12746100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 34037625 - 34037544
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattga 129  Q
    ||||||||||||||  ||||||| ||| |||| |||||  | |||||||| |||||||||||| |||||||||  |||||||    
T  34037625 tatgaggtgtcacacagactaaagtgacagtagaaaatagtcactttgattcctgaaccaaaaatcaatatcctcaaattga 34037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 12396162 - 12396246
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    |||||||||||||||||||||||||| |||||  | |||||  || || |||||||| |||||||||  || | |||||||||||    
T  12396162 gtgtcacatggactaaaatgaaagtagaaaatagtcactttagtcactaaaccaaaaatcaatatccccaattagaatctcaaat 12396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 17466204 - 17466259
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttg 95  Q
    ||||| |||||||||||||||||||| |||| | |||||| |||||||| ||||||    
T  17466204 acatggcatatgaggtgtcacatggattaaagtaaaagtagaaaatgatcactttg 17466259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 33162037 - 33162071
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    |||||||||||| ||||||||||||||||||||||    
T  33162037 tgtcatctaattatctcttttgttcaaaatcaatc 33162071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 38984844 - 38984810
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    |||||||||||||||||||||||||||||| ||||    
T  38984844 tgtcatctaattctctcttttgttcaaaataaatc 38984810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 39256862 - 39256812
Alignment:
Q  168 catctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    ||||||||||||||||||||||||| |||||| ||  ||||| ||||||||    
T  39256862 catctaattctctcttttgttcaaagtcaatcttccattaaaaaccaactt 39256812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 147
Target Start/End: Original strand, 39999125 - 39999197
Alignment:
Q  72 tgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||||||| |||||  | |||||||||||||||| |||| |||||||||   |||||||| |||||| ||||||||    
T  39999125 tgaaagtagaaaattgtcactttgatccctgaacaaaaaatcaatatcc---aattgaatatcaaatccctaaatc 39999197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 14887450 - 14887378
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||||||| |||||||| |||||||| |||||| | | | || ||||||||  |||| |||||||||    
T  14887450 tatgaggtgtcacagggactaaagtgaaagtagaaaatggtcaatatggtccctgaattaaaaatcaatatcc 14887378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 76
Target Start/End: Complemental strand, 31814304 - 31814268
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaa 76  Q
    |||||| |||||||||||||||| |||||||||||||    
T  31814304 acatgaaatatgaggtgtcacatagactaaaatgaaa 31814268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 37607273 - 37607345
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||| ||||||| |||||||| |||| ||| |||||  | |||||| || ||||||||||| |||||||||    
T  37607273 tatgagatgtcacaaggactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatcc 37607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 6210 - 6031
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||||||||| ||||||||   || ||||||||||||||| | |||||| |||||||||||||| |||||||||  ||||  |||||||||||    
T  6210 acatgacatatgaggtgacacatgga---aagtgaaagtaaaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaatataatctcaaatt 6114  T
Q  140 cctaaatcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||| |||||||||||| |||    |||||| ||||| |||||||||||||||||||||| ||| ||||||||||||||    
T  6113 cctaaatccctaaatctcaaatccctaaatgtcatataattatctcttttgttcaaaatcaatcttcaattaaacaccaactt 6031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 5769 - 5922
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||||||||||||| ||||||| |||||||||||| || | ||||||||||||||||||||| |||||||||  ||||| |||||||||| ||||| ||     
T  5769 atgaggtgtcacatagactaaagtgaaagtaaaaagtggtcactttgatccctgaaccaaaaatcaatatcctcaaattaaatctcaaatccctaattcc 5868  T
Q  149 ctaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacacc 213  Q
     ||||           ||||||||||||||||||||||||||||||||||| ||  |||||||||    
T  5869 ttaaa-----------tgtcatctaattctctcttttgttcaaaatcaatcttccattaaacacc 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 47 - 218
Target Start/End: Original strand, 6612580 - 6612755
Alignment:
Q  47 atatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||||||||| |||||||| | |||||| |||||||| |||||  ||| |||||||||| |||||||||  |||||||||||||||| |||||||    
T  6612580 atatgaggtgtcacagggactaaattcaaagtagaaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaat 6612679  T
Q  147 cactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
      |||||||||||| |||    |||||||||||||||| ||||||| |||||||||| ||  ||||||||||||||    
T  6612680 tcctaaatctcaaatccctaaatgtcatctaattctcttttttgtttaaaatcaatcttccattaaacaccaactt 6612755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 49 - 216
Target Start/End: Original strand, 52439613 - 52439784
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||| |||||||| |||| ||| |||||||| |||||| | |||||||||||| |||||||| |||||||||  ||||||||| |||||||||||||||     
T  52439613 atgatgtgtcacaaggaccaaagtgaaagtagaaaatggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaaatcc 52439712  T
Q  149 ctaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    |||||| | ||| ||     |||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  52439713 ctaaattttaaatccttaaatgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 52439784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 25038044 - 25038149
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||| || |||||| |||||||||||||| ||||||||| |||||||||||||||||     
T  25038044 acataacatatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatc 25038143  T
Q  140 cctaaa 145  Q
    ||||||    
T  25038144 cctaaa 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 25043256 - 25043361
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    |||| ||||||||||||||||||| |||||| |||||||| ||||| || |||||| |||||||||||||| ||||||||| |||||||||||||||||     
T  25043256 acataacatatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaatatccctaaattgaatctcaaatc 25043355  T
Q  140 cctaaa 145  Q
    ||||||    
T  25043356 cctaaa 25043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 218
Target Start/End: Original strand, 51450163 - 51450345
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||| |||||||||||||||| |||||||| |||||||| |||||||| ||| |  ||| |||||||||| | |||||||  || |||||||||||||     
T  51450163 acatgtcatatgaggtgtcacagggactaaactgaaagtagaaaatgatcactatagtccatgaaccaaaaataaatatccccaacttgaatctcaaatc 51450262  T
Q  140 cctaaatcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
     | ||||  |||||||||||| ||     |||||||||||| |||||||||||||||||||||| ||  ||||||||||||||    
T  51450263 tcaaaatttctaaatctcaaatccgtaagtgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaactt 51450345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 236
Target Start/End: Original strand, 34085691 - 34085870
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||| ||| || | ||||||||||||||||| |||||||| |||||||| | |||||||||| |||||||||  ||||||||| |||||||||||||    
T  34085691 catatgatgtgacatagggactaaaatgaaagtagaaaatgatcactttgatgcttgaaccaaaaatcaatatccccaaattgaatttcaaattcctaaa 34085790  T
Q  146 tcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttgact 236  Q
     |||||||           |||||||||||||| |||||||||||||||||||| ||  |||| || ||||||  | ||| ||||||||||    
T  34085791 ccactaaa-----------tgtcatctaattctttcttttgttcaaaatcaatcttcctttaatcaacaacttactgttatatccttgact 34085870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 7944304 - 7944474
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||| ||| ||| |||||||| ||||| || |||||| |||||| ||||||| |||||||||  ||||||||| |||||| ||||||    
T  7944304 catatgaggtgtcacatagaccaaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 7944403  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||  | |||||||||||| ||| |||| ||||||||||||| ||  ||||||||||||    
T  7944404 tc-ttaaatccttaaatgcatgtcatctaattatcttttttattcaaaatcaatcttccattaaacaccaac 7944474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 22857539 - 22857375
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||||||||||||||||||||||| |||||||| ||| |  | |||||||   ||||||||||| ||||||| |  ||||||||||||||||     
T  22857539 acatgacatatgaggtgtcacatggactaaagtgaaagtagaaactagtcactttgaaaactgaaccaaaaatcaatatacccaaattgaatctcaaatc 22857440  T
Q  140 cctaaatcactaaa-tctcaaacccctg----tcatctaattctctcttttgttcaaaatcaatc 199  Q
    | |||||| ||||| ||||||| ||||     |||||||||| ||  ||||||||||||||||||    
T  22857439 cttaaatccctaaaatctcaaatccctaaatatcatctaattttcctttttgttcaaaatcaatc 22857375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 9340999 - 9340891
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||| ||||| |||||||||||||    
T  9340999 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaaa 9340900  T
Q  146 tcactaaat 154  Q
    || ||||||    
T  9340899 tccctaaat 9340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 52440530 - 52440377
Alignment:
Q  50 tgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcac 149  Q
    |||||||||||| || | ||| |||||||| |||||  | |||||| |||||||||||||| | | ||| |  ||||||||| |||||||||||||||      
T  52440530 tgaggtgtcacaggggccaaagtgaaagtagaaaatagtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaaatcct 52440431  T
Q  150 taaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||||||||||| ||||    ||||||||||||||||||||||| ||||| ||||    
T  52440430 taaatctcaaatccctaaatgtcatctaattctctcttttgtttaaaattaatc 52440377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 6613939 - 6613840
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||| ||| ||||| |||||||| ||||||||  |||| ||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||    
T  6613939 tatggggtttcacagggactaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaatc 6613840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 32665744 - 32665577
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaac-caaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| ||||||||| ||||| |||||||||  ||||||||| |||||| |||||    
T  32665744 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaattgaatatcaaatccctaa 32665645  T
Q  145 atcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    |||  ||||| || |||    |||||||||||| ||| |||||||||||||||||| ||  || |||||||||    
T  32665644 atc-ttaaatccttaaa----tgtcatctaattatcttttttgttcaaaatcaatcttctattcaacaccaac 32665577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 11830061 - 11830158
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||||||||||| |||| |||||||| |||||| | | ||||||||  ||||||||| |||||||||  |||||||||||||||||| |||||    
T  11830061 atgaggtgtcacatggattaaagtgaaagtagaaaatggtcattttgatcctagaaccaaaaatcaatatcctaaaattgaatctcaaattcttaaat 11830158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 22856843 - 22856939
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||| ||||||||||||||||  ||||||| |||||||| |||||||| |||||  | |||||||||||| |||||||||  ||||||||||||||||    
T  22856843 acatggcatatgaggtgtcaca--gactaaagtgaaagtagaaaatgatcactttagttcctgaaccaaaattcaatatcctcaaattgaatctcaaat 22856939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 146
Target Start/End: Original strand, 3117813 - 3117918
Alignment:
Q  41 catgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattc 140  Q
    |||||||||||||||||||||  ||||||| |||||||| |||||||| | |||  ||| |||||||||| | |||||||  ||||||||| |||||| |    
T  3117813 catgacatatgaggtgtcacaatgactaaagtgaaagtagaaaatgatcattttagtccttgaaccaaaaattaatatccccaaattgaatatcaaatcc 3117912  T
Q  141 ctaaat 146  Q
    ||||||    
T  3117913 ctaaat 3117918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 9339795 - 9339896
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||| ||||||| |||| ||| |||||||| |||||| | |||||| || ||||||||||| |||||||||  ||||||||| |||||| ||||||    
T  9339795 catatgagatgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 9339894  T
Q  146 tc 147  Q
    ||    
T  9339895 tc 9339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 126
Target Start/End: Original strand, 1001326 - 1001400
Alignment:
Q  52 aggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaat 126  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||||| |||||| ||| ||||||||| |||||    
T  1001326 aggtgtcacatggactaaagtgaaagtagaaaatagttactttgatccttgaaccgaaaatcaatatccctaaat 1001400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 32664652 - 32664808
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| |||||||||||| |||||  | |||||| ||  |||| ||||| ||||||| |  ||||||||| |||||||||||||    
T  32664652 catatgaggtgtcaaagggaccaaaatgaaagtagaaaatagtcactttggtct-tgaatcaaaaatcaatattcccaaattgaatatcaaattcctaaa 32664750  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||||||||| |||    | | || ||||||||||||||||| ||||| ||||    
T  32664751 tccttaaatctcaaatccctaaatctgatttaattctctcttttgtttaaaattaatc 32664808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 165
Target Start/End: Original strand, 5782551 - 5782662
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaa 153  Q
    ||||||||||||||||| ||||| ||||||||  | ||||| |||||| |||||||| |||||||||  ||  | ||||||| |||||||||||  ||||    
T  5782551 gtgtcacatggactaaagtgaaactaaaaaattgtcactttaatccctaaaccaaaaatcaatatccccaatatcaatctcacattcctaaatccttaaa 5782650  T
Q  154 tctcaaacccct 165  Q
    || |||| ||||    
T  5782651 tcacaaatccct 5782662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 143
Target Start/End: Original strand, 39977504 - 39977598
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattccta 143  Q
    ||||||||||||| |||||||| |  | ||| |||||||| |||||| || ||||||||||| |||||||||  |||||||||| ||||| ||||    
T  39977504 atgaggtgtcacaaggactaaagtagatgtagaaaatgataactttggtctctgaaccaaaaatcaatatcctcaaattgaatcgcaaatcccta 39977598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 84
Target Start/End: Complemental strand, 1001852 - 1001818
Alignment:
Q  50 tgaggtgtcacatggactaaaatgaaagtaaaaaa 84  Q
    |||||||||||||||||||||||||||||||||||    
T  1001852 tgaggtgtcacatggactaaaatgaaagtaaaaaa 1001818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 16249815 - 16249913
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||| ||||| | || ||||| |||||||| |||||| | | |||  |||||||||| ||| ||||||||| |||||||||||| |||| ||||||||    
T  16249815 atgagctgtcataggggctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaaatc 16249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 26518261 - 26518359
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||||||||||  | |||| |||| ||| |||||| | |||||| || ||||||| |||  |||||||   |||||||||||||||||||||||||    
T  26518261 atgaggtgtcacataaattaaagtgaaggtagaaaatggtcactttggtctctgaaccgaaaaccaatatctccaaattgaatctcaaattcctaaatc 26518359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 51453649 - 51453579
Alignment:
Q  90 actttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaatctcaaa 160  Q
    ||||||||||||||| || || |||||||||  ||||||||| |||||| ||||||||  |||||||||||    
T  51453649 actttgatccctgaatcataaatcaatatccgcaaattgaatttcaaatccctaaatccttaaatctcaaa 51453579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 1407802 - 1407871
Alignment:
Q  51 gaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||||||||||||| |||||||| ||||| || |||||| ||| |||||| ||| | |||||||    
T  1407802 gaggtgtcacatggactaaagtgaaagtagaaaattatcactttggtccttgaaccgaaaattaatatcc 1407871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 7945529 - 7945456
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatat 118  Q
    ||||||||||||||||| |||  ||| |||||||| |||||| | |||||| ||||| |||||||| |||||||    
T  7945529 acatatgaggtgtcacaaggatcaaagtgaaagtagaaaatggtcactttggtccctaaaccaaaaatcaatat 7945456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 534500 - 534428
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||||  |||||||| ||||||||||||||||| ||||||||||  ||| | ||| |||||||||    
T  534500 tatgacgtgtcacggggactaaagtgaaagtaaaaaatgatcactttgatccacgaatcgaaaatcaatatcc 534428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 22856955 - 22856989
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    |||||||||||||||||||||||| ||||||||||    
T  22856955 tgtcatctaattctctcttttgttaaaaatcaatc 22856989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 44719527 - 44719593
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||| ||||||||||||||| |||||  | |||||| |||||||||  ||| |||||||||    
T  44719527 gtgtcacatgaactaaaatgaaagtagaaaattgtcactttgctccctgaactgaaaatcaatatcc 44719593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 11059787 - 11059864
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaa 125  Q
    |||||||||||||| |||||||| || | |||||||||  | |||||||||||| |||| ||| | ||||||| ||||    
T  11059787 tatgaggtgtcacagggactaaagtggaggtaaaaaattgtcactttgatccctcaaccgaaaattaatatccctaaa 11059864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 23703959 - 23704012
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||||||| ||||||||||||||||| |||  ||  ||||||||||||||    
T  23703959 tgtcatctaattatctcttttgttcaaaattaattttccattaaacaccaactt 23704012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 8075807 - 8075638
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||  |||||||| |||||| |||||||||||||| ||||||| |  ||||||||| ||||||||||| |    
T  8075807 catatgaggtgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctata 8075708  T
Q  146 tcactaaatctcaaaccc---ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    || |||||||||||| ||    |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  8075707 tccctaaatctcaaatcctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 8075638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 40612633 - 40612459
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| |||||||| |||||||||||||| ||||||| |  |||||||||  ||||| ||||||    
T  40612633 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaa 40612534  T
Q  146 tcactaaatctcaaacccctg----tcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || |||||||| ||| ||||     |||||||||| |||||||||||||||||||||| ||  ||||||||||||    
T  40612533 tccctaaatcttaaatccctaaatatcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaac 40612459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 25590579 - 25590736
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| || ||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  25590579 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 25590678  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||||||||| ||     |||||||||||||||||||||||||||||| ||||    
T  25590679 tccttaaatctcaaatccataaatgtcatctaattctctcttttgttcaaaattaatc 25590736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 46 - 199
Target Start/End: Original strand, 40611409 - 40611566
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||| | |||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  40611409 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 40611508  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||  ||||||||||| |||    |||||| ||||||||||||||||||||||| ||||    
T  40611509 tccttaaatctcaaatccctaaatgtcatataattctctcttttgttcaaaattaatc 40611566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 45 - 212
Target Start/End: Original strand, 32640436 - 32640607
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||| |||||||||| |||| ||| |||||||| |||||| | |||||| ||| |||||||||| ||||||| |  ||||||||| ||||||||||||    
T  32640436 acatataaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattccaaaattgaatatcaaattcctaa 32640535  T
Q  145 atcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |||  ||||||||||| |||    ||||||||||||||||||||| |||||||| |||| ||  ||||||||    
T  32640536 atccttaaatctcaaatccctaaatgtcatctaattctctcttttattcaaaattaatcttccattaaacac 32640607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 2464818 - 2464992
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| |||||||||  ||||||||| |||||| ||||||    
T  2464818 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 2464917  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||||| ||| ||     |||||||||||| ||| ||||||||||| |||||| ||  ||||||||||||    
T  2464918 tccttaaatcttaaatccttaaatgtcatctaattatcttttttgttcaaagtcaatcttccattaaacaccaac 2464992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 147
Target Start/End: Complemental strand, 578723 - 578625
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||||| ||||||||||||||||||||||| |||||| |||||| |||||||||| ||| ||||||||| |||||||||||||| ||| |||||||    
T  578723 atgaggtgtgacatggactaaaatgaaagtaaagaatgatcactttggtccctgaaccgaaaatcaatatccctaaattgaatctcagatttctaaatc 578625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 194
Target Start/End: Complemental strand, 2466747 - 2466595
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||| ||||||| ||| |||||||| |||||  | | |||| |||||||||||||| ||||||| |  ||||||||| |||||||| ||||    
T  2466747 catatgaggtgtcccatggaccaaagtgaaagtagaaaatagtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaattcttaaa 2466648  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaat 194  Q
    ||  ||||||||||| |||    |||||||||||||||| |||||||||||||    
T  2466647 tccttaaatctcaaatccctaaatgtcatctaattctcttttttgttcaaaat 2466595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 240
Target Start/End: Original strand, 9537191 - 9537382
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||| ||||||||  ||||||| |||||||| |||||  | ||||||||||||||| ||||| |||||||||  |||||||||||||||| ||||||    
T  9537191 catatgatgtgtcacagtgactaaagtgaaagtagaaaatagtcactttgatccctgaatcaaaaatcaatatccccaaattgaatctcaaatccctaaa 9537290  T
Q  146 tcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcac-ttaaacaccaacttcattttaaatccttgactgtgc 240  Q
    ||   ||  |  |||    |||||||||||||||||||||||||||| |||||| || | ||||||||||||||  | |||  |||||||||||||    
T  9537291 tctaaaatccataaa----tgtcatctaattctctcttttgttcaaagtcaatcttcccattaaacaccaacttactattaggtccttgactgtgc 9537382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 28591087 - 28590916
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaacc-aaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||| |||| ||||||| |  ||||||||| |||||||| |||    
T  28591087 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaatcaatattcccaaattgaatatcaaattcttaa 28590988  T
Q  145 atcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |||  ||||||||||| |||    |||||| ||||||||| ||||||||||||| |||| ||  ||||||||    
T  28590987 atccttaaatctcaaatccctaaatgtcatataattctcttttttgttcaaaattaatcttccattaaacac 28590916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 8074599 - 8074773
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| | || ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||| || |||    
T  8074599 catatgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccccaaa 8074698  T
Q  146 tcactaaatctcaaacc----cctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || |||||||| ||| |      |||||||||||| |||||| ||||||||||||||| |   ||||||||||||    
T  8074699 tccctaaatcttaaatctttaaatgtcatctaattatctcttctgttcaaaatcaatcttacattaaacaccaac 8074773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 32641700 - 32641600
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||| ||||| |||| ||| ||||||||||||||| |||||||||||||| |||||||| |||||||||  ||||||||| | |||| ||||||    
T  32641700 catatgaggtatcacagggaccaaa-tgaaagtaaaaaatggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaaa 32641602  T
Q  146 tc 147  Q
    ||    
T  32641601 tc 32641600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 14889918 - 14890091
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| | |||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||| |  |||||    
T  14889918 catatgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaattcgctaaa 14890017  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaa 215  Q
    || |||||||| ||| ||     ||||||||| || | |||||||||||||||||||| ||  |||||||||||    
T  14890018 tccctaaatcttaaatccttaaatgtcatctagttatttcttttgttcaaaatcaatcttccattaaacaccaa 14890091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 34173435 - 34173538
Alignment:
Q  52 aggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcacta 151  Q
    |||| ||||| |||||||| |||||||| |||||||| |||||| || ||||||||||| |||||||||  ||||||||| ||||||  ||||||| |||    
T  34173435 aggtatcacagggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaaatcccta 34173534  T
Q  152 aatc 155  Q
    ||||    
T  34173535 aatc 34173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 147
Target Start/End: Original strand, 18004811 - 18004908
Alignment:
Q  50 tgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||||||||  |||||||||||||||| |||||  | |||||| |||||||| ||||| |||||||||  ||||||||| |||||| ||||||||    
T  18004811 tgaggtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaaatc 18004908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 154
Target Start/End: Complemental strand, 14891121 - 14891013
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| ||| |||| |||||| | |||||  |||||||| ||||| ||||||| |  ||||||||| |||||||||||||    
T  14891121 catatgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatattcccaaattgaatttcaaattcctaaa 14891022  T
Q  146 tcactaaat 154  Q
    || ||||||    
T  14891021 tccctaaat 14891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 544797 - 544911
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||  ||| |||||||| |||||  | | || | | |||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  544797 catatgaggtgtcacagggatcaaagtgaaagtagaaaatagtcatttgggttcctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 544896  T
Q  146 tcactaaatctcaaa 160  Q
    || ||||||||||||    
T  544897 tccctaaatctcaaa 544911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 546010 - 545848
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||  | |||||| ||| |||||||||| ||||||| |  |||||||||  ||||| ||||||    
T  546010 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaa 545911  T
Q  146 tcactaaatc-tcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||  |||||| | |||    |||||||||||| ||||||||||||  |||||||| ||  ||||||||    
T  545910 tc-ttaaatcgttaaa----tgtcatctaattatctcttttgttctgaatcaatcttccattaaacac 545848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 46 - 216
Target Start/End: Original strand, 4593010 - 4593177
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattg--aatctcaaattccta 143  Q
    ||||||||||| |||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||  |||   |||| ||||    
T  4593010 catatgaggtg-cacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaaaataaaaaatcccta 4593108  T
Q  144 aatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||||   || ||| |||    |||||||||||| |||||||||||||||||||||| |   ||||||||||||    
T  4593109 aatcttaaattcttaaa----tgtcatctaattatctcttttgttcaaaatcaatctttcattaaacaccaac 4593177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 12445363 - 12445284
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatct 133  Q
    ||||||||||||||||| | |||||| |||||||| |||| ||| ||||||| |||| ||||||||  |||||| |||||    
T  12445363 gtgtcacatggactaaagtaaaagtagaaaatgatcacttcgatacctgaacaaaaaatcaatatctctaaattaaatct 12445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 28589848 - 28589955
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||| |||| | |||| ||| | |||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| ||||||  |||||    
T  28589848 catatgaggggtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaaa 28589947  T
Q  146 tcactaaa 153  Q
    || |||||    
T  28589948 tctctaaa 28589955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 148
Target Start/End: Complemental strand, 2314444 - 2314386
Alignment:
Q  90 actttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||||| |||||||||||||| | |||||||  ||||||||| ||||||||||||||||    
T  2314444 actttggtccctgaaccaaaatttaatatccccaaattgaatatcaaattcctaaatca 2314386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 9537948 - 9537853
Alignment:
Q  127 tgaatctcaaattcctaaatcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||||| | |||||||| ||||||||||||  |||    || ||||||||||||| ||||||||||||||||| ||  ||||||| ||||||    
T  9537948 tgaatctcaattccctaaatccctaaatctcaaattcctaaatgttatctaattctctcctttgttcaaaatcaatcttccattaaacatcaactt 9537853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 104
Target Start/End: Complemental strand, 9538007 - 9537945
Alignment:
Q  42 atgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaa 104  Q
    ||||||||||| || |||||||||||||| |||||||| |||||| | |||||| ||||||||    
T  9538007 atgacatatgatgtttcacatggactaaagtgaaagtataaaatggtcactttggtccctgaa 9537945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 13651106 - 13651041
Alignment:
Q  55 tgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||||| |||||||| ||||||||||||||| | |||||  |||||||||| ||| |||||||||    
T  13651106 tgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccctgaaccgaaaatcaatatcc 13651041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 118
Target Start/End: Original strand, 37072730 - 37072799
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatat 118  Q
    |||||||||||||||||| |||||||||||| |||||  | |||||  |||||||||| ||| |||||||    
T  37072730 atgaggtgtcacatggaccaaaatgaaagtagaaaatagtcactttagtccctgaaccgaaaatcaatat 37072799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 16611875 - 16611931
Alignment:
Q  64 gactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||||| |||| ||| |||||||| ||||| ||||||||||||||| |||||||||    
T  16611875 gactaaagtgaatgtagaaaatgatcactttaatccctgaaccaaaaatcaatatcc 16611931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 19183112 - 19183184
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||| |||||||||| ||||||||||||||| | |||||| || ||||| | ||| |||||||||    
T  19183112 tatgacgtgtcatatggactaaagtgaaagtaaaaaatggtgactttgctctctgaatcgaaaatcaatatcc 19183184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 31946991 - 31946932
Alignment:
Q  62 tggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcca 121  Q
    ||||||||| ||||||||||||||| | |||||| |||||||| | ||| ||||||||||    
T  31946991 tggactaaagtgaaagtaaaaaatggtcactttggtccctgaatcgaaaatcaatatcca 31946932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 216
Target Start/End: Complemental strand, 32641594 - 32641543
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    |||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  32641594 tgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 32641543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 18400341 - 18400439
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||||| |||||||||||||| ||||  ||||||| |||||||  ||||| || ||| || |||||  ||||||||  || || ||||||||||    
T  18400341 acatgacatatcaggtgtcacatggagtaaagcgaaagtagaaaatgaccactttaattcctaaatcaaaaaacaatatccccaacttaaatctcaaat 18400439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 21069460 - 21069557
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||| |||||| ||||| |||| |||||||| |||||| | | ||||||||||||||  ||| ||||||| |  || ||||||||||||| |||||||    
T  21069460 tatgacgtgtcatatggattaaagtgaaagtagaaaatggtca-tttgatccctgaactgaaaatcaatattctcaacttgaatctcaaatccctaaat 21069557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 32555498 - 32555461
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaat 85  Q
    ||||||||||||||||||||||| |||||||| |||||    
T  32555498 tatgaggtgtcacatggactaaagtgaaagtagaaaat 32555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Original strand, 27720733 - 27720765
Alignment:
Q  167 tcatctaattctctcttttgttcaaaatcaatc 199  Q
    |||| ||||||||||||||||||||||||||||    
T  27720733 tcatataattctctcttttgttcaaaatcaatc 27720765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 46 - 202
Target Start/End: Original strand, 2591774 - 2591935
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattg-aatctcaaattcctaa 144  Q
    ||||||||||||||||||||||||| ||||||||||||||    |||||| |||||||| ||||| ||||||||   |||||| ||||||||||||||||    
T  2591774 catatgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctcgaaattgaaatctcaaattcctaa 2591873  T
Q  145 atcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatc 202  Q
    ||   ||||||||||| | |    ||||||||||||||||||||||||||||||||||||||    
T  2591874 attcttaaatctcaaatctctaaatgtcatctaattctctcttttgttcaaaatcaatcatc 2591935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 45 - 194
Target Start/End: Complemental strand, 55389444 - 55389291
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||| ||| ||||||| |  ||||||||| ||||||||||||    
T  55389444 acatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatattcccaaattgaatatcaaattcctaa 55389345  T
Q  145 atcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaat 194  Q
    |||  ||||||||||| |||    ||||||||||||||||||||||||||||||    
T  55389344 atccttaaatctcaaatccctaaatgtcatctaattctctcttttgttcaaaat 55389291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 48809629 - 48809479
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||||||| |||||||| |||||| | |||||||||| |||||||||| ||||||| | |||||||||| |||||||||||||    
T  48809629 catatgaggtgtcagaaggactaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattcctaaattgaatatcaaattcctaaa 48809530  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaa 192  Q
    |   ||||||||||| |||    |||||||||||||||| |||||||||||    
T  48809529 tacttaaatctcaaatccctaaatgtcatctaattctctattttgttcaaa 48809479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 194
Target Start/End: Original strand, 48573134 - 48573286
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||||||| |||||||||| ||||||| |  ||||||||| |||||||||||||    
T  48573134 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaa 48573233  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaat 194  Q
    |   ||||||||||| |||    ||||||||||||||||||||| ||||||||    
T  48573234 ttcttaaatctcaaatccctaaatgtcatctaattctctcttttattcaaaat 48573286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 36280291 - 36280121
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| |||||||||| | |||||| | |||||  ||||| |||||||| ||||||| |  ||||||||| |||||||||||||    
T  36280291 catatgaggtgtcacacggaccaaaatgaaagaagaaaatggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 36280192  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||  ||||||||||| |||    |||||| ||||||||||||||||||||||| |||| ||  ||||||||    
T  36280191 tccttaaatctcaaatccctaaatgtcatttaattctctcttttgttcaaaattaatcttccattaaacac 36280121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 48574433 - 48574263
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||  ||| |||||||||| |||||||||  ||||||||| ||||||  |||||    
T  48574433 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaaa 48574334  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    || |||||||| ||| ||     |||||| ||||| ||| |||||||||||||||||||||  ||||||||    
T  48574333 tccctaaatcttaaatccttaaatgtcatataattatcttttttgttcaaaatcaatcatccattaaacac 48574263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 46 - 192
Target Start/End: Complemental strand, 53959074 - 53958925
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||| ||||||| |||| ||| |||||||| |||||  | ||||||  ||||||||||||| ||||||| |  ||||||||| |||||||||||||    
T  53959074 catatgagctgtcacagggaccaaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 53958975  T
Q  146 tcactaaatctcaaacc---cctgtcatctaattctctcttttgttcaaa 192  Q
    ||  ||||||||||| |     ||||||||||||||||||||||||||||    
T  53958974 tccttaaatctcaaatcttaaatgtcatctaattctctcttttgttcaaa 53958925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 17700668 - 17700838
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaat-atccataaattgaatctcaaattcctaa 144  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| ||||||||| |||| ||||| ||||| ||||||||| ||||||||||||    
T  17700668 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaataatcca-aaattgaatatcaaattcctaa 17700766  T
Q  145 atcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||   ||||||||||| ||     |||||| ||||||||| ||||||||||||| |||| ||  ||||||||    
T  17700767 attcttaaatctcaaatccttaaatgtcatataattctctattttgttcaaaattaatcttccattaaacac 17700838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 45 - 216
Target Start/End: Original strand, 36279100 - 36279267
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||||||||||||| |||| ||| |||||||| |||||| | |||||| ||||||||||||||   |||||||  ||||||||| |||||| |||||    
T  36279100 acatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaatatcaaatccctaa 36279199  T
Q  145 atcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    |||  ||||| || |||     ||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  36279200 atc-ttaaatccttaaa----agtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 36279267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 197
Target Start/End: Complemental strand, 36827418 - 36827282
Alignment:
Q  57 tcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaatct 156  Q
    ||||| |||||||| ||||| || |||||||||| |||| |||||||| | ||| |||||||||  ||||||||| ||||||||||||||| | ||  ||    
T  36827418 tcacagggactaaagtgaaaatagaaaatgattattttggtccctgaatcgaaaatcaatatccccaaattgaatttcaaattcctaaatctcaaatcct 36827319  T
Q  157 caaacccctgtcatctaattctctcttttgttcaaaatcaa 197  Q
     |||    ||||| |||||||||||||||||||||||||||    
T  36827318 taaa----tgtcaactaattctctcttttgttcaaaatcaa 36827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 52318291 - 52318125
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| || | ||| |||||||| |||||| | |||||| ||| ||||||||||  ||||||||  ||||||||| |||||| ||||||    
T  52318291 catatgaggtgtcacaaggtccaaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaattgaatatcaaatccctaaa 52318192  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||    |||||||||||| ||| |||||||||||||||||| ||  ||||||||||||    
T  52318191 tc-ttaaatccttaaa----tgtcatctaattatcttttttgttcaaaatcaatcttccattaaacaccaac 52318125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 53957821 - 53957923
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||||||||||||  |||| ||| |||||||| ||||||||||||||  ||| |||||||||| |||||||||  ||||||||| |||||| |||||    
T  53957821 acatatgaggtgtcacggggaccaaagtgaaagtagaaaatgattactttagtccatgaaccaaaaatcaatatccccaaattgaatgtcaaatccctaa 53957920  T
Q  145 atc 147  Q
    |||    
T  53957921 atc 53957923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 216
Target Start/End: Original strand, 55388211 - 55388384
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatca 148  Q
    |||| |||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| |||||||||  ||||||||| |||||| |||||||      
T  55388211 atgatgtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaattc 55388310  T
Q  149 ctaaatctcaaaccc----ctgtcatctaat--tctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    |||||||| ||| ||     |||||||||||  ||| | |||||||||||||||||  ||  ||||||||||||    
T  55388311 ctaaatcttaaatccttaaatgtcatctaattatcttttttttgttcaaaatcaatattctattaaacaccaac 55388384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 48808521 - 48808622
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    ||||||||||||||||  ||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||| ||||||    
T  48808521 catatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaatccctaaa 48808620  T
Q  146 tc 147  Q
    ||    
T  48808621 tc 48808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 20464231 - 20464339
Alignment:
Q  39 aacatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||||| ||||| |||||  |||||||||||||||| |||||| | |||||| ||| |||| ||||| |||||||||  || ||||| |||||||    
T  20464231 aacatgacatacgaggtatcacagagactaaaatgaaagtagaaaatggtcactttggtccatgaatcaaaaatcaatatccccaatttgaacctcaaat 20464330  T
Q  139 tcctaaatc 147  Q
     ||||||||    
T  20464331 ccctaaatc 20464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 146
Target Start/End: Complemental strand, 47428549 - 47428457
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||||||||||| ||||||||  ||||| | |||||  |||||||||||||| | ||||| ||||| ||||||||||||| |||||||    
T  47428549 gtgtcacatggactaaagtgaaagtaggaaatggtcactttagtccctgaaccaaaaattaatattcataacttgaatctcaaatccctaaat 47428457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 19114670 - 19114760
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||| |||||||| |||||||| |||||| | ||||| ||||||||| ||||| |||||||||  || ||||||||||||| ||||||    
T  19114670 gtgtcacaaggactaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatatccc-aacttgaatctcaaatccctaaa 19114760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 33837333 - 33837424
Alignment:
Q  67 taaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaatctca 158  Q
    ||||||||||||| |||||| | |||||| |||||||||||||| |||||||||  | ||||||| |||||| | ||| || ||||||||||    
T  33837333 taaaatgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaatccttaagtctctaaatctca 33837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 45599046 - 45599133
Alignment:
Q  59 acatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||||||||||||||| |||||| | |||||  | |||||||||||| ||||||| | ||| ||||| ||||||| |||||||    
T  45599046 acatggactaaaatgaaagtagaaaatggtcactttagttcctgaaccaaaaatcaatattcttaacttgaaactcaaatccctaaat 45599133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 612377 - 612457
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||| |||||||||||||  ||||||| |||||||| |||||||| | ||| | || |||||||||| |||||||||    
T  612377 acatgacacatgaggtgtcacagagactaaagtgaaagtagaaaatgatcaatttaacccatgaaccaaaaatcaatatcc 612457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 33427888 - 33427972
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||||||||||| |||||||| ||||| || |||||   ||||||||||||| |||||||||  || |||||||| ||||    
T  33427888 gtgtcacatggactaaagtgaaagtagaaaattatcactttagcccctgaaccaaaaatcaatatccccaacttgaatcttaaat 33427972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 3694076 - 3693996
Alignment:
Q  64 gactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    ||||||| |||||||| |||||| | |||||||||||||||  |||| | ||| |||  |||||||||||||||| |||||    
T  3694076 gactaaagtgaaagtacaaaatggtcactttgatccctgaataaaaaattaatctcctcaaattgaatctcaaatccctaa 3693996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 146
Target Start/End: Complemental strand, 33428421 - 33428329
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||  ||||||||||||||||||||||| | |||||  ||||| ||| |||| ||||||||   || ||||||||||| | |||||||    
T  33428421 gtgtcacaaagactaaaatgaaagtaaaaaatggtcactttagtccctcaacaaaaaatcaatatctcaaacttgaatctcaattccctaaat 33428329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 165
Target Start/End: Complemental strand, 19115133 - 19115022
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaa 153  Q
    ||||||||||||||||| |||||||| ||||| |  |||||  ||| ||||| |||| |||||||||  || |||||| ||| || || |||||  ||||    
T  19115133 gtgtcacatggactaaagtgaaagtagaaaataaccactttagtccatgaactaaaaatcaatatccccaatttgaatatcatatccccaaatccttaaa 19115034  T
Q  154 tctcaaacccct 165  Q
    ||||||| ||||    
T  19115033 tctcaaatccct 19115022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 52317186 - 52317233
Alignment:
Q  165 tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  52317186 tgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 52317233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 147
Target Start/End: Complemental strand, 47118037 - 47117945
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||||||| |||||||| ||||| || ||| || | |||||  |||||||||||||| |||||||||  || ||||||||| ||| ||||||||    
T  47118037 gtgtcacaaggactaaagtgaaaatagaaa-tggtcactttagtccctgaaccaaaaatcaatatccccaacttgaatctcgaatccctaaatc 47117945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 5737983 - 5737831
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| | |||||| || || || ||||| |||||||||  ||||||||||||||||     
T  5737983 acatgacatatgaggtgtcacatggactaaagtaaaagtaaaaaatggtcactttggtctctaaatcaaaaatcaatatccccaaattgaatctcaaatc 5737884  T
Q  140 cctaaatcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaat 198  Q
    |||||||| | |||||| ||     |||||||||||| |||||||||||||||||||||    
T  5737883 cctaaatctc-aaatctaaa-----tgtcatctaattatctcttttgttcaaaatcaat 5737831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 32898419 - 32898245
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| |||||||| |||||| | |||||| |||||||||||||| |||||||||  ||||||||| |||||| ||||||    
T  32898419 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaaa 32898320  T
Q  146 tcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || |||||| | ||| ||     |||||||||||| ||| |||||||||| ||||||| ||  ||||||||||||    
T  32898319 tccctaaattttaaatccttaaatgtcatctaattatcttttttgttcaatatcaatcttccattaaacaccaac 32898245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 218
Target Start/End: Original strand, 5737005 - 5737187
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaa-tatccataaattgaatctcaaat 138  Q
    |||||||||||||||||||||| |||||||| | |||||| ||| | || |||||| ||||||| |||||| |||| |||||  ||||||||||||||||    
T  5737005 acatgacatatgaggtgtcacaaggactaaagtaaaagtagaaatt-atcactttggtccctgatccaaaaatcaaatatccccaaattgaatctcaaat 5737103  T
Q  139 tcctaaatcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
     | |||||| |||||||| ||| ||||    |||||||||||||| ||||| |||||||| |||| ||  ||||||||||||||    
T  5737104 ccttaaatctctaaatctgaaatccctaaatgtcatctaattctccctttttttcaaaattaatcttccattaaacaccaactt 5737187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 28619512 - 28619349
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||| | |||||||||||||||||  ||||||| |||||||| ||||| |||| |||||||||| |||||||||  ||||||||| ||||||     
T  28619512 acatgacatataatgtgtcacatggactaaatcgaaagtagaaaatgatcactttaatccatgaaccaaaaatcaatatccccaaattgaatttcaaatc 28619413  T
Q  140 cctaaatcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    |||||||| ||||||  ||||  ||    |||||||||||||||| |||| || ||||||||||    
T  28619412 cctaaatccctaaattgcaaattcctaaatgtcatctaattctcttttttattaaaaatcaatc 28619349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 49 - 138
Target Start/End: Original strand, 8569560 - 8569649
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    ||||||||||||||||||||||||||||| ||||||| || | |||||||||||||| |||| |||||||||| ||||||||||||||||    
T  8569560 atgaggtgtcacatggactaaaatgaaaggaaaaaattatcattttgatccctgaactaaaaatcaatatccacaaattgaatctcaaat 8569649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 35178779 - 35178609
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| ||||| || |||||||| ||||||  ||||||||||||| ||||||| |  ||||||||| |||||||| ||||    
T  35178779 catatgaggtgtcatagggaccaaagtgaaactagaaaatgatcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcttaaa 35178680  T
Q  146 tcactaaatctcaaacccc----tgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    ||  ||||||| ||| |||    |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  35178679 tccttaaatctaaaatccctaaatgtcatctaattctctcttttgttcaaaattaatcttccattaaacac 35178609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 1952944 - 1952778
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||||||| |||||| | |||||| |||||||||||||| ||||||| |  ||||||||| |||||| ||||||    
T  1952944 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccctaaa 1952845  T
Q  146 tcactaaat-ctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    ||  ||||| || |||    |||||||||||| |||||||||||||||||||||| ||  ||||||| ||||    
T  1952844 tc-ttaaatccttaaa----tgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaacaac 1952778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 216
Target Start/End: Complemental strand, 10407558 - 10407384
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||| | |||| ||| |||||||| |||||| |||||||  || ||||||||||| ||||||| |  ||||||||| ||||| |  ||||    
T  10407558 catatgaggtgtcataaggaccaaagtgaaagtagaaaatggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaagtgttaaa 10407459  T
Q  146 tcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaac 216  Q
    || ||||| || ||| || |    ||||||||||| |||||||||||||||||||||| ||  ||||||||||||    
T  10407458 tccctaaagcttaaatccttaaatgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaac 10407384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 41122717 - 41122616
Alignment:
Q  45 acatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaa 144  Q
    |||||||| ||||||||| ||||||| ||||| || |||||  | ||||||||||||||||||||| ||||||||   ||||||||||||||||||||||    
T  41122717 acatatgaagtgtcacattgactaaagtgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaattcctaa 41122618  T
Q  145 at 146  Q
    ||    
T  41122617 at 41122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 35177551 - 35177700
Alignment:
Q  54 gtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatcactaaa 153  Q
    |||||||| |||| ||| |||||||| |||||| |||||||| |||||||||||||| ||| |||||  ||||||||| |||||| |||||||  |||||    
T  35177551 gtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaaattcctaaa 35177650  T
Q  154 tctcaaaccc----ctgtcatctaattctctcttttgttcaaaatcaatc 199  Q
    ||| ||| ||     ||||| |||||| ||| ||||||||||||||||||    
T  35177651 tcttaaatccttaaatgtcacctaattatcttttttgttcaaaatcaatc 35177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 240
Target Start/End: Complemental strand, 5965402 - 5965198
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||| ||| ||||||||  || |||| |||||||| |||||  | | |||| ||  ||||  |||| |||||||||| ||||||||| ||||||     
T  5965402 acatgacatttgatgtgtcacaaagagtaaagtgaaagtagaaaattgtcattttggtctatgaagtaaaaatcaatatccacaaattgaatttcaaatc 5965303  T
Q  140 cctaaatcactaaatctcaaacccct----gtcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaacttcattttaaatccttgac 235  Q
     ||||||  |||||||| ||| ||||    ||||||||||| |||||||||||||||||||||| ||  ||||||||||||||  | |||| ||| ||||    
T  5965302 tctaaattcctaaatcttaaatccctaagtgtcatctaattatctcttttgttcaaaatcaatcttccattaaacaccaacttagtgttaagtccatgac 5965203  T
Q  236 tgtgc 240  Q
    |||||    
T  5965202 tgtgc 5965198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 160
Target Start/End: Complemental strand, 32564469 - 32564349
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||| ||||||| ||||||||||||||||| ||| |||| |||||||| | |||  |||||  ||||||| | |||||||    |||||||||||||||    
T  32564469 acatgccatatgatgtgtcacatggactaaagtgatagtagaaaatgatcattttagtcccttgaccaaaaatgaatatccccgtattgaatctcaaatt 32564370  T
Q  140 cctaaatcactaaatctcaaa 160  Q
    |||||||| ||||||||||||    
T  32564369 cctaaatccctaaatctcaaa 32564349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 212
Target Start/End: Original strand, 10406355 - 10406510
Alignment:
Q  46 catatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||||||||||| |||| ||| ||| |||| |||||  | |||||| || ||||||||||| |||||||    ||||||||| |||||||||||||    
T  10406355 catatgaggtgtcacagggaccaaagtgatagtagaaaatagtcactttggtctctgaaccaaaaatcaatatttccaaattgaatatcaaattcctaaa 10406454  T
Q  146 tcactaaatctcaaacccctgtcatctaattctctcttttgttcaaaatcaatcatcacttaaacac 212  Q
    || |||||           |||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  10406455 tccctaaa-----------tgtcatctaattctctcttttgttcaaaattaatcttctattaaacac 10406510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 39138616 - 39138517
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    |||||||||||||| |||||||| |||||||| |||||| | |||||||| | || ||| ||| |||||||||   ||||||||||||||| ||||||||    
T  39138616 tatgaggtgtcacaaggactaaagtgaaagtagaaaatggtcactttgattcttgtaccgaaaatcaatatccccgaattgaatctcaaatccctaaatc 39138517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 41121268 - 41121366
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaat 138  Q
    |||||| ||||||||||| ||| || ||||| |||||||| |||||  | |||||| ||| |||||||||| |||||||||  ||||||||| ||||||    
T  41121268 acatgatatatgaggtgtaacaagggctaaagtgaaagtagaaaattgtcactttggtccttgaaccaaaaatcaatatccccaaattgaatttcaaat 41121366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 12637713 - 12637656
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaac 105  Q
    ||||| ||||||||||||||||| |||||||| || ||||| |||||| |||||||||    
T  12637713 tatgatgtgtcacatggactaaagtgaaagtagaatatgatcactttggtccctgaac 12637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 9626413 - 9626341
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    |||||||||||||||| |||||| |||||||| ||| |||  ||||| ||||||||||| ||| | |||||||    
T  9626413 tatgaggtgtcacatgaactaaagtgaaagtagaaattgaccactttaatccctgaaccgaaaattaatatcc 9626341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 218
Target Start/End: Complemental strand, 32564330 - 32564279
Alignment:
Q  167 tcatctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    |||||||||||||||||||||||||||||| || ||  ||||| ||||||||    
T  32564330 tcatctaattctctcttttgttcaaaatcattcttccattaaataccaactt 32564279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 41121377 - 41121408
Alignment:
Q  168 catctaattctctcttttgttcaaaatcaatc 199  Q
    ||||||||||||||||||||||||||||||||    
T  41121377 catctaattctctcttttgttcaaaatcaatc 41121408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 45476515 - 45476416
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||| |||||| |||||| ||| | |||||| |||||| | |||||  |||||||||||||| ||||||| |  ||||| ||||||||||  |||||||    
T  45476515 tatgatgtgtcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaaatc 45476416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 32563848 - 32563898
Alignment:
Q  168 catctaattctctcttttgttcaaaatcaatcatcacttaaacaccaactt 218  Q
    ||||||||||||||||||||||||||| |||| ||  |||||||| |||||    
T  32563848 catctaattctctcttttgttcaaaattaatcttctattaaacactaactt 32563898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 24199101 - 24199174
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaa-ccaaaactcaatatcc 120  Q
    ||||||||||||||   |||||| ||||||||||||||||| | |||| |||||||| | |||| |||||||||    
T  24199101 tatgaggtgtcacagatactaaagtgaaagtaaaaaatgatcattttggtccctgaatcgaaaaatcaatatcc 24199174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 28524929 - 28525001
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||| |||||||||| ||||||||||||||  | | |||| ||| |||||| ||| |||||||||    
T  28524929 tatgaagtgtcagatggactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatcc 28525001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 41754139 - 41754211
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||| | |||||||| ||||||||||||||  | |||||| |||||||| | ||| |||||||||    
T  41754139 tatgacgtgtcatagggactaaagtgaaagtaaaaaatagtcactttggtccctgaatcgaaaatcaatatcc 41754211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 45476336 - 45476412
Alignment:
Q  51 gaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaatt 127  Q
    |||||||||||  ||| ||| |||||||| |||||  | |||||| |||||||||||||| ||||||| | ||||||    
T  45476336 gaggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatattcctaaatt 45476412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 160
Target Start/End: Original strand, 79236 - 79356
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    |||||||||||||||| ||||| ||||||||||||||| | |||||||| |||||| ||||||||  |||| ||||||| | ||||||||||||| ||||    
T  79236 acatgacatatgaggtctcacagggactaaaatgaaagaagaaaatgatcactttggtccctgaataaaaaatcaatatgcctaaattgaatctcgaatt 79335  T
Q  140 cctaaatcactaaatctcaaa 160  Q
    ||||||||  |||||||||||    
T  79336 cctaaatccttaaatctcaaa 79356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 194
Target Start/End: Complemental strand, 31239947 - 31239789
Alignment:
Q  40 acatgacatatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaatt 139  Q
    ||||||||||| |||||||||||| |||||| | |||||| |||||| | |||||  | | |||||||||| |||||||||  ||||||||||||||||     
T  31239947 acatgacatataaggtgtcacatgaactaaagtcaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 31239848  T
Q  140 cctaaatcactaaatctcaaaccc----ctgtcatctaattctctcttttgttcaaaat 194  Q
    | |||||| |||||||||||| ||     | || |||||||||||||||||||||||||    
T  31239847 cttaaatccctaaatctcaaatccttaaatatcgtctaattctctcttttgttcaaaat 31239789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 30748161 - 30748233
Alignment:
Q  48 tatgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatcc 120  Q
    ||||| |||||||| |||||||| ||||||||||||||| | | |||| |||||||| ||||| |||||||||    
T  30748161 tatgacgtgtcacagggactaaagtgaaagtaaaaaatggtcaatttggtccctgaatcaaaaatcaatatcc 30748233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 24621249 - 24621302
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctg 102  Q
    ||||||||| ||| ||||||||||||||||| |||||||| |||||| ||||||    
T  24621249 atgaggtgttacaaggactaaaatgaaagtagaaaatgatcactttggtccctg 24621302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 5265370 - 5265422
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccct 101  Q
    ||||||||||||||||| |||| |||||||||||||| || | ||||||||||    
T  5265370 atgaggtgtcacatggagtaaagtgaaagtaaaaaataatcattttgatccct 5265422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 19600189 - 19600098
Alignment:
Q  55 tgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaatc 147  Q
    ||||||| |||||||| |||||||| |||||| | |||||| ||| | || | ||| | ||||||| |||||||||||||| |||||||||||    
T  19600189 tgtcacagggactaaagtgaaagtagaaaatggtcactttggtcc-taaatcgaaaattaatatccctaaattgaatctcagattcctaaatc 19600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 145
Target Start/End: Complemental strand, 36473 - 36400
Alignment:
Q  72 tgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaa 145  Q
    |||||||| |||||| | ||||||||||||||||| ||| |||||||||  |||||||| ||||||| ||||||    
T  36473 tgaaagtagaaaatggtcactttgatccctgaaccgaaaatcaatatcctaaaattgaaactcaaatccctaaa 36400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 49 - 146
Target Start/End: Original strand, 8672 - 8768
Alignment:
Q  49 atgaggtgtcacatggactaaaatgaaagtaaaaaatgattactttgatccctgaaccaaaactcaatatccataaattgaatctcaaattcctaaat 146  Q
    ||||||||||||||||| |||| || ||||||| |||| | ||||| || | |||||||||| |||||||||  || || |||||||||| |||||||    
T  8672 atgaggtgtcacatggaataaagtggaagtaaagaatgttcactttaat-cgtgaaccaaaaatcaatatccccaacttaaatctcaaatccctaaat 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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