View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_high_168 (Length: 234)
Name: NF19103_high_168
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_high_168 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 25 - 216
Target Start/End: Original strand, 52874583 - 52874774
Alignment:
| Q |
25 |
gtactagtttatgatagtttcttaaatatgttatggagtgacttttaaatcatttggtatatcatgatgtaaagttacactttcatttaactagtgtttt |
124 |
Q |
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| T |
52874583 |
gtactagtttatgatagtttcttaaatatgttatggagtgacttttaaatcatttggtatatcatgatgtaaagttacactttcatttaactagtgtttt |
52874682 |
T |
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| Q |
125 |
aacgatgcttaaattggaaatttataatcaatgaattacctcatcatgaatgctactatgcctttcctttcatctttgactaccttctatat |
216 |
Q |
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| T |
52874683 |
aacgatgcttaaattggaaatttataatcaatgaattacctcatcatgaatgctactatgcctttcctttcatctttgactaccttctatat |
52874774 |
T |
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