View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_high_169 (Length: 232)

Name: NF19103_high_169
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_high_169
NF19103_high_169
[»] chr3 (11 HSPs)
chr3 (1-222)||(3712895-3713115)
chr3 (1-232)||(3719416-3719646)
chr3 (1-232)||(3705341-3705575)
chr3 (1-229)||(3701598-3701822)
chr3 (1-191)||(3707854-3708041)
chr3 (75-151)||(32775269-32775345)
chr3 (75-151)||(32814955-32815031)
chr3 (76-151)||(26807447-26807522)
chr3 (74-149)||(32772689-32772764)
chr3 (76-222)||(3716412-3716551)
chr3 (85-138)||(41845773-41845826)
[»] chr5 (4 HSPs)
chr5 (76-223)||(38327773-38327917)
chr5 (76-190)||(38322601-38322713)
chr5 (74-154)||(31965393-31965473)
chr5 (75-148)||(8219733-8219806)
[»] chr8 (8 HSPs)
chr8 (76-223)||(2105864-2106009)
chr8 (71-149)||(12483098-12483176)
chr8 (72-149)||(12670511-12670588)
chr8 (77-191)||(12289395-12289510)
chr8 (75-148)||(939435-939508)
chr8 (71-149)||(12482778-12482856)
chr8 (74-149)||(11949429-11949504)
chr8 (111-150)||(11949184-11949223)
[»] chr1 (5 HSPs)
chr1 (71-148)||(27981044-27981121)
chr1 (76-152)||(43849044-43849120)
chr1 (77-149)||(30953117-30953189)
chr1 (85-138)||(39755137-39755190)
chr1 (85-138)||(39760491-39760544)
[»] chr7 (2 HSPs)
chr7 (75-150)||(25796171-25796246)
chr7 (85-138)||(45343081-45343134)
[»] chr4 (4 HSPs)
chr4 (76-150)||(19185991-19186065)
chr4 (74-148)||(26741372-26741446)
chr4 (77-153)||(30161835-30161911)
chr4 (77-148)||(51386264-51386335)
[»] chr6 (1 HSPs)
chr6 (76-148)||(21882907-21882979)
[»] chr2 (4 HSPs)
chr2 (76-148)||(4767493-4767565)
chr2 (76-148)||(38551328-38551400)
chr2 (85-138)||(14428572-14428625)
chr2 (85-138)||(34962092-34962145)


Alignment Details
Target: chr3 (Bit Score: 162; Significance: 1e-86; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 3712895 - 3713115
Alignment:
Q  1 agtttcctttgtcatattatcattgtagtctctagatattaaatatctaataacattttcatcaaatgagcaacaaagcaccagtggtctagtggtagaa 100  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  3712895 agtttcctttgtcatattatcattgtagtctatagatgttaaatatctaataacattatcatcaaatgaacaacaaagcaccagtggtctagtggtagaa 3712994  T
Q  101 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacatttgtggtgttcggtaaacatcattc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||| |||||| || || ||||||||||||| ||||||| |     
T  3712995 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcatattcgagggagctatgatgataatatctgtggtgttcggt-aacatcactt 3713093  T
Q  201 ctcctgaaacattggatgaaaa 222  Q
    ||||||||||||||||||||||    
T  3713094 ctcctgaaacattggatgaaaa 3713115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3719416 - 3719646
Alignment:
Q  1 agtttcctttgtcatattatcattgtagtctctagatattaaatatctaataacattttcatcaaatgagcaacaaagcaccagtggtctagtggtagaa 100  Q
    ||||| || ||||||| ||||||||||| |||||||| ||||| ||||||||| ||| |||  |||||  ||||||||||||||||||||||||||||||    
T  3719416 agttttctgtgtcatactatcattgtaggctctagatgttaaagatctaataatattgtca--aaatgtacaacaaagcaccagtggtctagtggtagaa 3719513  T
Q  101 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacatttgtggtg-ttcggtaaacatcatt 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||| ||| ||||||||||||||||    
T  3719514 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatttgcagggagctatgatgaaaacatttgttgtgtttcggtaaacatcatt 3719613  T
Q  200 cctcctgaaacattggatgaaaaacatacctct 232  Q
    ||||||||||||| |||||||||||||||||||    
T  3719614 cctcctgaaacataggatgaaaaacatacctct 3719646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 3705341 - 3705575
Alignment:
Q  1 agtttcctttgtcatattatca----ttgtagtctctagatattaaatatctaataacattttcatcaaatgagcaacaaagcaccagtggtctagtggt 96  Q
    |||||||| |||||||||||||    ||||||||| |||||| ||||||| |||||||||| ||||||| |||  |||||||||||||||||||||||||    
T  3705341 agtttcctctgtcatattatcaatcattgtagtctgtagataataaatatgtaataacattatcatcaattgaataacaaagcaccagtggtctagtggt 3705440  T
Q  97 agaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacatttgtggtgttcggtaaacatc 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || |||| |||||||| ||||||    
T  3705441 agaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctatgatgataatatatgtgttgttcggt-aacatc 3705539  T
Q  197 attcctcctgaaacattggatgaaaaacatacctct 232  Q
    | | ||||||||||||||||||||||  ||||||||    
T  3705540 acttctcctgaaacattggatgaaaataatacctct 3705575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3701598 - 3701822
Alignment:
Q  1 agtttcctttgtcatattatcattgtagtctctagatattaaatatctaataacattttcatcaaatgagcaacaaagcaccagtggtctagtggtagaa 100  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||| |  |   || ||||||||||||||||||||||||||||||    
T  3701598 agtttcctttgtcatattatcattatagtatctagatgttaaatatctaacaacattttgaata---gaacaacaaagcaccagtggtctagtggtagaa 3701694  T
Q  101 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacatttgtggtgttcggtaaacatcattc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| || || ||||||||||||| ||||||| |     
T  3701695 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaaatttgagggagctatgatgataatatctgtggtgttcggt-aacatcactt 3701793  T
Q  201 ctcctgaaacattggatgaaaaacatacc 229  Q
    |||||||||||||||||||| | ||||||    
T  3701794 ctcctgaaacattggatgaataccatacc 3701822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 3707854 - 3708041
Alignment:
Q  1 agtttcctttgtcatattatcattgtagtctctagatattaaatatctaataacattttcatcaaatgagcaacaaagcaccagtggtctagtggtagaa 100  Q
    ||||| ||||||||||||||||||| ||| ||||||| ||||| || |||||||||| |||  | |  | ||||||||||||||||||||||||||||||    
T  3707854 agttttctttgtcatattatcattgcagtgtctagatgttaaagatgtaataacattatcaatagaacaacaacaaagcaccagtggtctagtggtagaa 3707953  T
Q  101 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacatttgtggtgttcggtaa 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||   || ||||||||||||| ||||||| |||| |||||    
T  3707954 tagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatatt---ggggctgtgatgaaaatatttgtgatgtttggtaa 3708041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 32775269 - 32775345
Alignment:
Q  75 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32775269 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 32775345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 75 - 151
Target Start/End: Original strand, 32814955 - 32815031
Alignment:
Q  75 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32814955 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 32815031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 76 - 151
Target Start/End: Complemental strand, 26807522 - 26807447
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26807522 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt 26807447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 149
Target Start/End: Original strand, 32772689 - 32772764
Alignment:
Q  74 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    |||||||| |||||| || |||||||||||||||||||||||||||||||  ||||| |||||| ||||| |||||    
T  32772689 caaagcacaagtggtttaatggtagaatagtaccctgccacggtacagacttgggtttgattcctggctgctgcaa 32772764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 3716412 - 3716551
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacat 175  Q
    |||||| | ||||||||||||||||||||||||      ||| |||| ||||||||||||||| |||||||||| ||  |||||| |||||| |||| |     
T  3716412 aagcacgaatggtctagtggtagaatagtaccc------ggttcagatccgggttcgattcccagctggtgcaaattctagggagttgtgataaaaataa 3716505  T
Q  176 ttgtggtgttcggtaaacatcattcctcctgaaacattggatgaaaa 222  Q
    || || | |||||| ||||||| |  |||||||| ||||||||||||    
T  3716506 ttctgattttcggt-aacatcacttgtcctgaaaaattggatgaaaa 3716551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 41845826 - 41845773
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  41845826 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 41845773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 38327773 - 38327917
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacat 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||  |||||||||||||| ||    
T  38327773 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttcttag--agctgtgatgaaaatat 38327870  T
Q  176 ttgtggtgttcggtaaacatcattcctcctgaaacattggatgaaaaa 223  Q
    |||||||||| ||||| |||||     ||||||||| |||||||||||    
T  38327871 ttgtggtgttgggtaa-catcaccttccctgaaacactggatgaaaaa 38327917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 38322601 - 38322713
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacat 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||||||||||||| |     
T  38322601 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcatttctga--gagctgtgatgaaaatag 38322698  T
Q  176 ttgtggtgttcggta 190  Q
    |||||||||| ||||    
T  38322699 ttgtggtgttgggta 38322713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 74 - 154
Target Start/End: Complemental strand, 31965473 - 31965393
Alignment:
Q  74 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31965473 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaactttg 31965393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 8219733 - 8219806
Alignment:
Q  75 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8219733 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 8219806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 2105864 - 2106009
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattttgagggagctgtgatgaaaacat 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | || | | ||| ||||||||| ||    
T  2105864 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcacctgtg-gagggctatgatgaaaatat 2105962  T
Q  176 ttgtggtgttcggtaaacatcattcctcctgaaacattggatgaaaaa 223  Q
    ||||| |||||||| |||||||    ||||||| ||||||||||||||    
T  2105963 ttgtgatgttcggt-aacatcacctatcctgaaccattggatgaaaaa 2106009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 12483176 - 12483098
Alignment:
Q  71 caacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483176 caacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 12483098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 12670588 - 12670511
Alignment:
Q  72 aacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12670588 aacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 12670511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 12289395 - 12289510
Alignment:
Q  77 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatt-ttgagggagctgtgatgaaaacat 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||  |||||| ||  |    
T  12289395 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattcgtgaaggagcaatgatgataatgt 12289494  T
Q  176 ttgtggtgttcggtaa 191  Q
    |||||||||| |||||    
T  12289495 ttgtggtgttgggtaa 12289510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 939508 - 939435
Alignment:
Q  75 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  939508 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 71 - 149
Target Start/End: Complemental strand, 12482856 - 12482778
Alignment:
Q  71 caacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  12482856 caacaaagcaccagtggtctagtggtagaatagtaccctgccatggtacagacccgggttcaattcctggctggtgcaa 12482778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 74 - 149
Target Start/End: Complemental strand, 11949504 - 11949429
Alignment:
Q  74 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  11949504 caaagcaccagtggtctagtggtagaatagtaccctgccacgctacagacccgggttcaattcctggctggtgcaa 11949429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 11949223 - 11949184
Alignment:
Q  111 ccacggtacagacccgggttcgattcccggctggtgcaat 150  Q
    ||||||| ||||||||||||| ||||||||||||||||||    
T  11949223 ccacggttcagacccgggttcaattcccggctggtgcaat 11949184  T

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Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 27981044 - 27981121
Alignment:
Q  71 caacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27981044 caacaaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 27981121  T

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Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 76 - 152
Target Start/End: Complemental strand, 43849120 - 43849044
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattt 152  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43849120 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaattt 43849044  T

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Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 30953189 - 30953117
Alignment:
Q  77 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30953189 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaa 30953117  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 39755137 - 39755190
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  39755137 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 39755190  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 39760491 - 39760544
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  39760491 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 39760544  T

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Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 25796171 - 25796246
Alignment:
Q  75 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaat 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25796171 aaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaat 25796246  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Complemental strand, 45343134 - 45343081
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  45343134 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 45343081  T

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Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 19185991 - 19186065
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaat 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19185991 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaat 19186065  T

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Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 148
Target Start/End: Complemental strand, 26741446 - 26741372
Alignment:
Q  74 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26741446 caaagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 26741372  T

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Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 30161835 - 30161911
Alignment:
Q  77 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcaatttt 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30161835 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgcattttt 30161911  T

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Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 51386335 - 51386264
Alignment:
Q  77 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51386335 agcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 51386264  T

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Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 21882907 - 21882979
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21882907 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 21882979  T

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Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 4767565 - 4767493
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4767565 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 4767493  T

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Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 38551328 - 38551400
Alignment:
Q  76 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38551328 aagcaccagtggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattcccggctggtgca 38551400  T

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Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 14428572 - 14428625
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  14428572 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 14428625  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 34962092 - 34962145
Alignment:
Q  85 tggtctagtggtagaatagtaccctgccacggtacagacccgggttcgattccc 138  Q
    |||| ||||||||  |||||||||| ||||||||| |||| |||||||||||||    
T  34962092 tggtgtagtggtatcatagtaccctcccacggtactgaccagggttcgattccc 34962145  T

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