View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_high_2 (Length: 891)

Name: NF19103_high_2
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_high_2
NF19103_high_2
[»] chr3 (43 HSPs)
chr3 (373-878)||(8006971-8007475)
chr3 (17-325)||(8007525-8007834)
chr3 (30-88)||(49586984-49587042)
chr3 (26-88)||(1395611-1395673)
chr3 (25-90)||(20192672-20192737)
chr3 (25-90)||(38462220-38462285)
chr3 (25-90)||(40122819-40122883)
chr3 (25-88)||(41028919-41028982)
chr3 (27-84)||(22232767-22232824)
chr3 (30-87)||(24887352-24887409)
chr3 (25-90)||(32703077-32703142)
chr3 (29-88)||(21862243-21862303)
chr3 (30-86)||(42808923-42808979)
chr3 (31-90)||(37689450-37689509)
chr3 (27-86)||(42809242-42809301)
chr3 (28-90)||(28779298-28779360)
chr3 (29-86)||(905040-905097)
chr3 (25-74)||(2128333-2128382)
chr3 (25-86)||(20669118-20669179)
chr3 (25-86)||(27792811-27792872)
chr3 (25-90)||(43116494-43116559)
chr3 (27-80)||(44284134-44284187)
chr3 (27-84)||(51278229-51278286)
chr3 (31-83)||(15304420-15304472)
chr3 (23-79)||(48364956-48365012)
chr3 (19-90)||(2865725-2865795)
chr3 (39-90)||(42038942-42038993)
chr3 (25-80)||(44374720-44374775)
chr3 (28-90)||(12923391-12923453)
chr3 (28-90)||(24235749-24235811)
chr3 (30-84)||(28306102-28306156)
chr3 (26-88)||(42084319-42084381)
chr3 (25-95)||(47584413-47584483)
chr3 (35-80)||(6241160-6241205)
chr3 (39-84)||(10101548-10101593)
chr3 (39-84)||(10212473-10212518)
chr3 (25-90)||(23785194-23785259)
chr3 (25-70)||(24605102-24605147)
chr3 (41-90)||(31337467-31337516)
chr3 (100-133)||(34924557-34924590)
chr3 (25-90)||(36139817-36139882)
chr3 (233-262)||(50600093-50600122)
chr3 (39-84)||(53736185-53736230)
[»] scaffold0590 (1 HSPs)
scaffold0590 (25-90)||(1140-1205)
[»] scaffold0275 (1 HSPs)
scaffold0275 (25-90)||(2770-2835)
[»] chr6 (45 HSPs)
chr6 (25-90)||(29274295-29274360)
chr6 (25-90)||(10452426-10452491)
chr6 (25-74)||(33500563-33500612)
chr6 (32-90)||(1402942-1403000)
chr6 (28-90)||(10154163-10154225)
chr6 (25-74)||(4420556-4420605)
chr6 (25-90)||(6310290-6310355)
chr6 (25-90)||(22742305-22742370)
chr6 (25-90)||(24836265-24836330)
chr6 (30-90)||(281914-281974)
chr6 (33-95)||(326399-326462)
chr6 (32-90)||(18604677-18604736)
chr6 (23-86)||(20671935-20671998)
chr6 (31-144)||(24782004-24782121)
chr6 (32-90)||(2027472-2027530)
chr6 (25-71)||(2514641-2514687)
chr6 (25-90)||(10400208-10400273)
chr6 (25-90)||(2727922-2727987)
chr6 (25-90)||(4006653-4006718)
chr6 (25-90)||(9093622-9093687)
chr6 (25-90)||(10016484-10016549)
chr6 (29-90)||(21959671-21959732)
chr6 (29-86)||(29940739-29940796)
chr6 (30-71)||(30784501-30784542)
chr6 (29-82)||(30865425-30865478)
chr6 (25-90)||(33068627-33068692)
chr6 (25-90)||(33259755-33259820)
chr6 (25-133)||(264310-264414)
chr6 (40-87)||(3204611-3204658)
chr6 (25-80)||(4247711-4247765)
chr6 (43-90)||(7785808-7785855)
chr6 (23-90)||(34429756-34429823)
chr6 (44-90)||(7479173-7479219)
chr6 (44-86)||(7713983-7714025)
chr6 (25-67)||(34544539-34544581)
chr6 (25-86)||(2034509-2034569)
chr6 (25-90)||(3155115-3155180)
chr6 (226-271)||(4308785-4308830)
chr6 (27-84)||(7354145-7354202)
chr6 (25-74)||(24774697-24774746)
chr6 (45-90)||(27857334-27857378)
chr6 (19-88)||(27893980-27894049)
chr6 (25-58)||(31461617-31461650)
chr6 (25-74)||(32975917-32975966)
chr6 (25-90)||(33787811-33787876)
[»] chr5 (39 HSPs)
chr5 (25-90)||(35135728-35135793)
chr5 (34-90)||(14295454-14295510)
chr5 (23-88)||(29116998-29117063)
chr5 (25-84)||(37063146-37063205)
chr5 (25-83)||(28586839-28586897)
chr5 (25-70)||(7096213-7096258)
chr5 (25-90)||(12407727-12407792)
chr5 (25-90)||(16889674-16889739)
chr5 (25-90)||(32059655-32059719)
chr5 (25-90)||(39128578-39128643)
chr5 (43-90)||(583839-583886)
chr5 (26-88)||(985573-985635)
chr5 (23-93)||(14714903-14714972)
chr5 (25-83)||(20982208-20982266)
chr5 (25-90)||(4855637-4855702)
chr5 (25-90)||(18704102-18704166)
chr5 (25-90)||(19177418-19177483)
chr5 (25-90)||(36539685-36539750)
chr5 (25-90)||(14599369-14599436)
chr5 (32-88)||(32969185-32969241)
chr5 (25-65)||(40048371-40048411)
chr5 (33-93)||(42569043-42569103)
chr5 (37-88)||(12595808-12595859)
chr5 (20-87)||(37968825-37968892)
chr5 (24-86)||(9860868-9860930)
chr5 (25-63)||(13224368-13224406)
chr5 (28-74)||(28578834-28578880)
chr5 (25-67)||(34690813-34690855)
chr5 (25-58)||(1773523-1773556)
chr5 (25-90)||(9202814-9202879)
chr5 (25-74)||(10280658-10280707)
chr5 (25-58)||(12460098-12460131)
chr5 (25-74)||(21782651-21782700)
chr5 (25-90)||(29588819-29588883)
chr5 (25-74)||(31694457-31694506)
chr5 (25-90)||(32172592-32172657)
chr5 (25-90)||(35960353-35960417)
chr5 (25-82)||(38047929-38047986)
chr5 (45-90)||(39750102-39750147)
[»] chr2 (46 HSPs)
chr2 (17-90)||(29430687-29430759)
chr2 (25-87)||(17952770-17952832)
chr2 (25-147)||(5133711-5133837)
chr2 (25-90)||(10143111-10143176)
chr2 (25-90)||(18962104-18962169)
chr2 (27-82)||(40837502-40837557)
chr2 (25-87)||(25790065-25790127)
chr2 (25-90)||(31740025-31740091)
chr2 (32-88)||(14209223-14209279)
chr2 (25-80)||(32098384-32098439)
chr2 (39-90)||(33192146-33192197)
chr2 (25-87)||(28803575-28803637)
chr2 (40-90)||(33256694-33256744)
chr2 (25-90)||(4550716-4550781)
chr2 (25-74)||(5045239-5045288)
chr2 (25-90)||(11344350-11344415)
chr2 (25-90)||(13866828-13866893)
chr2 (25-90)||(25609735-25609800)
chr2 (25-74)||(34054983-34055032)
chr2 (25-90)||(37053533-37053598)
chr2 (25-89)||(9478238-9478302)
chr2 (46-90)||(11513858-11513902)
chr2 (25-89)||(28902016-28902080)
chr2 (25-69)||(31461377-31461421)
chr2 (23-87)||(35459847-35459911)
chr2 (25-69)||(38239638-38239682)
chr2 (43-86)||(3458614-3458657)
chr2 (31-90)||(14666493-14666552)
chr2 (25-80)||(15171189-15171244)
chr2 (25-83)||(13630354-13630412)
chr2 (47-89)||(29429824-29429866)
chr2 (32-90)||(30537593-30537651)
chr2 (48-90)||(33942112-33942154)
chr2 (44-144)||(43529866-43529963)
chr2 (25-90)||(3673746-3673811)
chr2 (50-87)||(5043629-5043666)
chr2 (28-65)||(7825194-7825231)
chr2 (25-66)||(13864589-13864630)
chr2 (25-90)||(15967609-15967674)
chr2 (25-74)||(27288572-27288621)
chr2 (25-86)||(33267586-33267647)
chr2 (25-74)||(33576676-33576725)
chr2 (25-90)||(35755568-35755633)
chr2 (25-70)||(37033983-37034028)
chr2 (25-58)||(41033048-41033081)
chr2 (49-90)||(43141834-43141875)
[»] chr1 (57 HSPs)
chr1 (25-90)||(15360833-15360898)
chr1 (25-90)||(44032065-44032130)
chr1 (24-88)||(23895274-23895338)
chr1 (27-90)||(45999354-45999417)
chr1 (25-90)||(17423004-17423070)
chr1 (39-93)||(44936653-44936707)
chr1 (28-90)||(49517012-49517074)
chr1 (25-90)||(29007782-29007847)
chr1 (25-90)||(33527213-33527278)
chr1 (25-90)||(36151571-36151636)
chr1 (25-90)||(48830142-48830207)
chr1 (39-91)||(27738245-27738297)
chr1 (29-88)||(6074417-6074476)
chr1 (25-84)||(30815707-30815766)
chr1 (25-68)||(50319231-50319274)
chr1 (25-91)||(15799643-15799709)
chr1 (39-89)||(18434545-18434595)
chr1 (29-90)||(4276702-4276763)
chr1 (33-90)||(30259553-30259610)
chr1 (25-89)||(4200168-4200232)
chr1 (30-90)||(7200908-7200968)
chr1 (25-90)||(15361650-15361717)
chr1 (25-85)||(35080141-35080201)
chr1 (26-90)||(46980195-46980259)
chr1 (25-89)||(50998491-50998555)
chr1 (39-86)||(1879097-1879144)
chr1 (43-90)||(4363698-4363745)
chr1 (25-60)||(13037803-13037838)
chr1 (25-88)||(23544708-23544771)
chr1 (46-89)||(28788605-28788648)
chr1 (43-90)||(30371105-30371152)
chr1 (25-80)||(38651485-38651540)
chr1 (24-71)||(43420019-43420066)
chr1 (27-90)||(45990124-45990187)
chr1 (27-89)||(3224364-3224426)
chr1 (29-83)||(5756759-5756813)
chr1 (28-90)||(6031545-6031607)
chr1 (227-265)||(10199327-10199365)
chr1 (47-89)||(18420921-18420963)
chr1 (27-89)||(37841939-37842001)
chr1 (39-89)||(39777616-39777666)
chr1 (26-84)||(43420198-43420256)
chr1 (25-91)||(44928221-44928287)
chr1 (25-91)||(45107562-45107627)
chr1 (25-90)||(4256108-4256173)
chr1 (39-80)||(14737781-14737822)
chr1 (25-74)||(15437902-15437951)
chr1 (25-90)||(17269189-17269254)
chr1 (25-90)||(17420142-17420207)
chr1 (34-79)||(17631178-17631223)
chr1 (29-90)||(32958595-32958656)
chr1 (41-90)||(34179938-34179987)
chr1 (29-90)||(40304120-40304181)
chr1 (26-79)||(40357963-40358016)
chr1 (25-74)||(43029483-43029532)
chr1 (25-90)||(43372025-43372090)
chr1 (25-90)||(52286617-52286682)
[»] chr7 (53 HSPs)
chr7 (26-90)||(5006575-5006639)
chr7 (29-93)||(39551611-39551675)
chr7 (25-86)||(33894562-33894622)
chr7 (25-90)||(35536046-35536111)
chr7 (31-86)||(43318598-43318653)
chr7 (25-84)||(45593791-45593850)
chr7 (41-99)||(23918912-23918970)
chr7 (25-144)||(28165030-28165153)
chr7 (25-90)||(1417203-1417268)
chr7 (25-74)||(2223087-2223136)
chr7 (25-90)||(27481360-27481425)
chr7 (25-90)||(49060479-49060544)
chr7 (25-80)||(7244641-7244696)
chr7 (39-86)||(18749880-18749927)
chr7 (25-72)||(31341133-31341180)
chr7 (25-95)||(2048102-2048171)
chr7 (31-89)||(4572543-4572601)
chr7 (25-83)||(27626197-27626255)
chr7 (25-71)||(35808989-35809035)
chr7 (30-84)||(39591539-39591593)
chr7 (25-90)||(3610806-3610871)
chr7 (41-90)||(9527156-9527205)
chr7 (25-74)||(9872810-9872859)
chr7 (25-86)||(27121656-27121717)
chr7 (27-80)||(28178910-28178963)
chr7 (25-90)||(45813246-45813311)
chr7 (25-89)||(5276163-5276227)
chr7 (27-90)||(7453463-7453527)
chr7 (25-142)||(12234899-12235018)
chr7 (43-91)||(17989088-17989136)
chr7 (34-90)||(30456516-30456572)
chr7 (25-89)||(30496643-30496707)
chr7 (25-69)||(42656454-42656498)
chr7 (28-91)||(43152966-43153030)
chr7 (23-74)||(1423083-1423134)
chr7 (27-74)||(2894758-2894805)
chr7 (167-226)||(9038168-9038227)
chr7 (39-90)||(12835003-12835054)
chr7 (43-90)||(45777237-45777284)
chr7 (29-95)||(992013-992079)
chr7 (25-87)||(5272889-5272951)
chr7 (25-87)||(22759125-22759187)
chr7 (109-143)||(45901180-45901214)
chr7 (25-71)||(46223157-46223203)
chr7 (25-91)||(48157185-48157251)
chr7 (25-66)||(5373164-5373205)
chr7 (33-90)||(21453241-21453298)
chr7 (25-74)||(24973883-24973932)
chr7 (27-88)||(24975845-24975906)
chr7 (25-58)||(28702699-28702732)
chr7 (25-86)||(30133988-30134049)
chr7 (25-90)||(31002700-31002765)
chr7 (25-74)||(40009409-40009458)
[»] chr4 (58 HSPs)
chr4 (28-90)||(54325103-54325165)
chr4 (29-87)||(54327518-54327576)
chr4 (25-90)||(30338658-30338723)
chr4 (25-88)||(21952514-21952577)
chr4 (25-71)||(51044544-51044590)
chr4 (25-90)||(30024639-30024704)
chr4 (25-80)||(4191678-4191734)
chr4 (39-90)||(4071835-4071886)
chr4 (39-90)||(24929446-24929497)
chr4 (39-90)||(53626729-53626780)
chr4 (28-86)||(22684586-22684644)
chr4 (25-91)||(29373952-29374018)
chr4 (25-83)||(36734832-36734890)
chr4 (25-71)||(47970257-47970303)
chr4 (25-90)||(6364088-6364153)
chr4 (25-82)||(9680603-9680660)
chr4 (25-90)||(11389465-11389530)
chr4 (39-88)||(20936070-20936119)
chr4 (25-90)||(26520295-26520360)
chr4 (25-90)||(44119228-44119293)
chr4 (25-90)||(45128376-45128441)
chr4 (29-90)||(49219082-49219143)
chr4 (25-74)||(52645831-52645880)
chr4 (30-90)||(27623579-27623639)
chr4 (25-85)||(32724058-32724118)
chr4 (27-87)||(44319891-44319950)
chr4 (100-144)||(55084489-55084533)
chr4 (26-90)||(55870407-55870471)
chr4 (47-90)||(927437-927480)
chr4 (19-74)||(2169961-2170016)
chr4 (39-90)||(8130127-8130178)
chr4 (25-88)||(19422357-19422420)
chr4 (31-90)||(21952906-21952965)
chr4 (27-90)||(21953214-21953277)
chr4 (31-90)||(24160561-24160620)
chr4 (25-88)||(25487613-25487676)
chr4 (43-90)||(43372035-43372082)
chr4 (25-88)||(44007940-44008003)
chr4 (25-79)||(5131309-5131363)
chr4 (25-90)||(8422905-8422968)
chr4 (25-88)||(8703688-8703753)
chr4 (23-88)||(21193935-21194001)
chr4 (40-90)||(30207637-30207686)
chr4 (30-68)||(36048743-36048781)
chr4 (25-90)||(41097309-41097375)
chr4 (25-83)||(50745939-50745997)
chr4 (25-66)||(4798649-4798690)
chr4 (26-87)||(11802475-11802535)
chr4 (25-90)||(18630619-18630684)
chr4 (25-74)||(20907112-20907161)
chr4 (25-90)||(21157707-21157772)
chr4 (25-90)||(22471270-22471335)
chr4 (25-90)||(24443977-24444042)
chr4 (25-90)||(25885798-25885863)
chr4 (29-74)||(34368820-34368865)
chr4 (27-80)||(35533283-35533336)
chr4 (25-58)||(40709478-40709511)
chr4 (25-90)||(46013366-46013431)
[»] chr8 (45 HSPs)
chr8 (25-90)||(787172-787237)
chr8 (30-83)||(6950266-6950319)
chr8 (27-90)||(34080332-34080395)
chr8 (25-86)||(37444485-37444546)
chr8 (25-90)||(42597340-42597405)
chr8 (27-90)||(1470922-1470985)
chr8 (30-73)||(10218858-10218901)
chr8 (26-73)||(39392744-39392791)
chr8 (19-89)||(2698726-2698796)
chr8 (31-93)||(8066904-8066966)
chr8 (25-71)||(26215435-26215481)
chr8 (24-90)||(31915335-31915401)
chr8 (26-80)||(36643947-36644001)
chr8 (25-71)||(42370446-42370492)
chr8 (39-84)||(778575-778620)
chr8 (25-90)||(1112792-1112857)
chr8 (28-89)||(3537098-3537159)
chr8 (25-90)||(4558737-4558802)
chr8 (25-90)||(11795031-11795096)
chr8 (25-74)||(14482141-14482190)
chr8 (25-90)||(29699193-29699258)
chr8 (29-90)||(34788493-34788554)
chr8 (30-90)||(6918245-6918305)
chr8 (30-90)||(11000627-11000687)
chr8 (25-73)||(11119082-11119130)
chr8 (43-91)||(42237487-42237535)
chr8 (39-74)||(10437838-10437873)
chr8 (25-80)||(14949827-14949882)
chr8 (25-88)||(26056024-26056087)
chr8 (25-129)||(35534893-35534992)
chr8 (39-74)||(40728500-40728535)
chr8 (25-83)||(5071040-5071098)
chr8 (25-63)||(11188248-11188286)
chr8 (29-71)||(26820142-26820184)
chr8 (39-93)||(35374436-35374490)
chr8 (25-82)||(8536123-8536179)
chr8 (31-84)||(9836926-9836979)
chr8 (25-90)||(10383769-10383833)
chr8 (25-90)||(12361131-12361196)
chr8 (33-86)||(25867033-25867086)
chr8 (26-83)||(27728094-27728151)
chr8 (25-90)||(28769405-28769470)
chr8 (25-90)||(29973020-29973085)
chr8 (25-90)||(34770831-34770896)
chr8 (25-90)||(35869776-35869841)
[»] scaffold0053 (1 HSPs)
scaffold0053 (25-88)||(20118-20181)
[»] scaffold0024 (1 HSPs)
scaffold0024 (25-90)||(27515-27580)
[»] scaffold0153 (2 HSPs)
scaffold0153 (34-90)||(6564-6620)
scaffold0153 (34-90)||(13584-13640)
[»] scaffold0428 (1 HSPs)
scaffold0428 (25-90)||(3843-3908)


Alignment Details
Target: chr3 (Bit Score: 409; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 373 - 878
Target Start/End: Complemental strand, 8007475 - 8006971
Alignment:
Q  373 atgagggtttgataagtgataacagtttgagaatttcagttgatgaagcttacattcacacttgtgcatcatagtaaatgtatgattttcctgtagatgt 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8007475 atgagggtttgataagtgataacagtttgagaatttcagttgatgaagcttacattcacacttgtgcatcatagtaaatgtatgattttcctgtagatgt 8007376  T
Q  473 ttgaagtgtatgcacatggtgaactagtcggacacagattgagtgtaatcacaattcacaacaatattaaccatcagatgtgatttttattcatttttga 572  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  8007375 ttgaagtgtatgcacatggtgaactagtcggacacagattgagtgtaatcacatttcacaacaatattaaccatcagatgtgatttttattcatttt-ga 8007277  T
Q  573 accgtcgattcctttgcccnnnnnnnnnnnnnnnnnnntagaagttagatagatatatgcacatgtgactgcatataatcctgtgttgggcgtcgcatta 672  Q
    |||||||||||||||| ||                   || ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  8007276 accgtcgattcctttgtccaaaaaaattgtgaaaaaaatacaagttagatagatatatacacttgtgactgcatataatcctgtgttgggcgtcgcatta 8007177  T
Q  673 tgaaactttagtcttttttacattattccttgcttaatcttcattttctgatatttttagcctgaagattcgaccaatgcatcatggtattttaagtcat 772  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8007176 tgaaactttagtcttttttacattattccttgcttaatcttcattttctgatatttttagcctgaagattcgaccaatgcatcatggtattttaagtcat 8007077  T
Q  773 ctagaattattattttttaattatctcattataatatcaaattttgcagttggaaatgctcaagaatccagagacaacgaggtcaaagatcaatggaagt 872  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  8007076 ctagaattattattttttaattatctcattataatataaaattttgcagttggaaatgctcaagaatccagagacaacgaggtcgaagatcaatggaagc 8006977  T
Q  873 ctgatg 878  Q
    ||||||    
T  8006976 ctgatg 8006971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 17 - 325
Target Start/End: Complemental strand, 8007834 - 8007525
Alignment:
Q  17 acaagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatcgctatcttagagagctt 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8007834 acaagggcttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatcgctatcttagagagctt 8007735  T
Q  117 atgaaaataaactgaaataagcttatgaccacttccttcttnnnnnnn-gcttatgaacacttcataagctgtttctataagttatcctgaaaattctca 215  Q
    |||||||||||||||||||||||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8007734 atgaaaataaactgaaataagcttatgatcacttccttcttaaaaaaaagcttatgaacacttcataagctgtttctataagttatcctgaaaattctca 8007635  T
Q  216 caagtgcttatttatgtaagtagataagctaaaataagtcaatccaaccaatgtcatattcttgattcacaatcagtttaccaagaggagtgattataat 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8007634 caagtgcttatttatgtaagtagataagctaaaataagtcaatccaaacaatgtcatattcttgattcacaatcagtttaccatgaggagtgattataat 8007535  T
Q  316 tttacatata 325  Q
    ||||||||||    
T  8007534 tttacatata 8007525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 30 - 88
Target Start/End: Complemental strand, 49587042 - 49586984
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaaactgttttcatataagctat 49586984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 1395611 - 1395673
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||| |||||||||||||||||||| |||||||||| | || |||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctat 1395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 20192737 - 20192672
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||||| ||| |||||||| ||||||    
T  20192737 ttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataa 20192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 38462220 - 38462285
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||| |||||||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  38462220 ttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataa 38462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 40122883 - 40122819
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||||||| ||||| |||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcata-aagctataa 40122819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 41028982 - 41028919
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||| ||||| ||| |||||||||    
T  41028982 ttatgtataagctatttctataacaaaagaaaaaataaagtcaatctgttttcaaataagctat 41028919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 22232767 - 22232824
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    ||||||||||| ||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  22232767 atgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataag 22232824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 24887409 - 24887352
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||||| |||||||||||| ||||||| ||||||||||||||  ||||||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagcta 24887352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 32703077 - 32703142
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||| | |||||||||| |||| ||||| |||| |||||||||||||||    
T  32703077 ttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 21862303 - 21862243
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagta-aagtcaaactgttatcatataagctat 88  Q
    ||||||||||||||||| |||||||||||| || |||||||| |||| |||||||||||||    
T  21862303 gtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctat 21862243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 86
Target Start/End: Original strand, 42808923 - 42808979
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||||||||||||||||||| |||||| ||| |||| | |||||||||    
T  42808923 tataagctgtttctataacaaaagataaaataaagttaaattgtttttatataagct 42808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 37689509 - 37689450
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| ||| ||||||||||||||||||||||| ||| | || |||||||||||||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataa 37689450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 42809242 - 42809301
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||| |||||||||||||||||||| || ||| ||| |||| |||||||||||    
T  42809242 atgtataagctatttctataacaaaagataaaatatagttaaattgttttcatataagct 42809301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 28779298 - 28779360
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||| |||||||  |||| || |||||||||||| || |||||||||||||||    
T  28779298 tgtataagctgtttttataacatcagatgaaataaagtcaaactattttcatataagctataa 28779360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 905097 - 905040
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||| |||||||||||||||||||| |||||||||  ||||  ||||||||||    
T  905097 gtataagctatttctataacaaaagataaaataaagtcaatttgtttgcatataagct 905040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 2128382 - 2128333
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||| ||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagttaaattgtt 2128333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 20669118 - 20669179
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||| |||||||||||| | ||| | |||||||||| |||| |||||||||||    
T  20669118 ttatgtataagctatttctataacaagatatacaataaagtcaaaatgttgtcatataagct 20669179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 27792811 - 27792872
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||| |||| | ||||||||||||| ||| |||||||| || |||||||||||    
T  27792811 ttatgtataagctatttcaaaaacaaaagataaaataaggtcaaactattttcatataagct 27792872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 43116559 - 43116494
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||| |||||||||||||||||||| | || ||||||  || |||||||||||||||    
T  43116559 ttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataa 43116494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 44284187 - 44284134
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||| |||||||||||||| |||||  |||||||||||||| |||||    
T  44284187 atgtataagctatttctataacaaaaaataaaacaaagtcaaactgttttcata 44284134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 51278286 - 51278229
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    ||||||||||| |||||||||||||| || || ||||||||||||||| |||| ||||    
T  51278286 atgtataagctatttctataacaaaatattaaataaagtcaaactgttttcatttaag 51278229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 15304472 - 15304420
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||| |||||||||||||||||||| |||||| ||| |||| ||||||||    
T  15304472 ataagctatttctataacaaaagataaaataaagttaaattgttttcatataa 15304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 48365012 - 48364956
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcat 79  Q
    ||||||||||||| | |||| ||||||||||||||| |||||||||| |||| ||||    
T  48365012 gattatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcat 48364956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 2865795 - 2865725
Alignment:
Q  19 aagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| |||||||| |||||||||| |||| ||||  ||||||||| |||| |||||||| ||||||    
T  2865795 aagggattatatataagctatttctataac-aaagttaaaacaaagtcaaattgttttcatataacctataa 2865725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 42038942 - 42038993
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||  | ||||||||||| ||| |||||||||||||||    
T  42038942 tttctataacaaaagatctaataaagtcaaaccgttttcatataagctataa 42038993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 44374775 - 44374720
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||| |||| |||||    
T  44374775 ttatgtataagctatatctttaacaaaagataaaataaagtcaaattgttttcata 44374720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 12923453 - 12923391
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || || ||| |||||||||| ||||||||||||| | || ||||||||||||    
T  12923453 tgtataagctattgctgtaataaaagataaaataaagtcaaactgctttcttataagctataa 12923391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 24235811 - 24235749
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| | |||||||||||||||||||  |||||||||||| ||   |||||||||||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataa 24235749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 28306102 - 28306156
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||| | ||||||||||||  |||| ||||||||||||||| |||||||||    
T  28306102 tataagctatctctataacaaaaagtaaaataaagtcaaactgttttcatataag 28306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 42084381 - 42084319
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||| ||||||||||||| |||||| ||| |||||  |||| | |||||||||||    
T  42084381 tatgtataagctatttctataacaaaggataaaataatgtcaacttgttttgatataagctat 42084319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 47584413 - 47584483
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatcttt 95  Q
    |||||| |||||| ||||||| ||||||| |||| ||||||||||| ||| | || |||||||||| ||||    
T  47584413 ttatgtgtaagctatttctatgacaaaaggtaaaataaagtcaaaccgttttaatgtaagctataaacttt 47584483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 6241205 - 6241160
Alignment:
Q  35 gctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||||||||||| |||| |||||||||||| || |||||    
T  6241205 gctgtttctataacaaaagttaaaataaagtcaaactattttcata 6241160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 10101593 - 10101548
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||||||||||||||| |||||| ||| |||| |||||||||    
T  10101593 tttctataacaaaagataaaataaagttaaattgttttcatataag 10101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 10212518 - 10212473
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||||||||||||||| |||||| ||| |||| |||||||||    
T  10212518 tttctataacaaaagataaaataaagttaaattgttttcatataag 10212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 23785194 - 23785259
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| | |||||| | || |||||||| ||||||||||||||  |||||||||||||||    
T  23785194 ttatgcataagttatttctacagcagaagataaaataaagtcaaactgtattcatataagctataa 23785259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 24605147 - 24605102
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaac 70  Q
    ||||||||||| | ||||||||||||||||| || |||||||||||    
T  24605147 ttatgtataagttatttctataacaaaagatgaaataaagtcaaac 24605102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 31337516 - 31337467
Alignment:
Q  41 tctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| ||||||||||||| ||||||||||||||| | ||||||| |||||    
T  31337516 tctaaaacaaaagataaaataaagtcaaactgtttttatataagttataa 31337467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 34924590 - 34924557
Alignment:
Q  100 gctatcttagagagcttatgaaaataaactgaaa 133  Q
    ||||||||||||||||||||||||||| ||||||    
T  34924590 gctatcttagagagcttatgaaaataagctgaaa 34924557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 36139817 - 36139882
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||||| ||||| ||| | |||||||| ||||||||||||| | || ||||||||||||    
T  36139817 ttatgaataagctatttctgtaatataagataaaataaagtcaaactgatttcgtataagctataa 36139882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 233 - 262
Target Start/End: Complemental strand, 50600122 - 50600093
Alignment:
Q  233 aagtagataagctaaaataagtcaatccaa 262  Q
    ||||||||||||||||||||||||||||||    
T  50600122 aagtagataagctaaaataagtcaatccaa 50600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 53736230 - 53736185
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||||||||||||||| ||| |||||||| || |||||||||    
T  53736230 tttctataacaaaagataaaataatgtcaaactattttcatataag 53736185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 1205 - 1140
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||| ||||    
T  1205 ttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 2770 - 2835
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||| ||||    
T  2770 ttatgtataagctatttctataacaaaagataaaataaagtcaaactattctcatataagccataa 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 9e-17; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 29274360 - 29274295
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||| ||||||||||| |||||||||| |||| |||||||||||||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataa 29274295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 10452491 - 10452426
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||| ||||| |||| ||||||| || |||||||||||||||    
T  10452491 ttatgtataagctatttctataacaaaatataaaataaaatcaaactattttcatataagctataa 10452426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 33500612 - 33500563
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  33500612 ttatgtataagctatttctataacaaaagataaagtaaaatcaaactgtt 33500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 1402942 - 1403000
Alignment:
Q  32 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||||||||||||||||| |||||| ||||| || |||||||||||||||    
T  1402942 taagctatttctataacaaaagataaaataaagttaaactattttcatataagctataa 1403000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 10154163 - 10154225
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| ||||||||||||||  |||||||||| ||||||||||||||| ||||||||| |||||    
T  10154163 tgtacaagctgtttctatagaaaaagataaaataaagtcaaactgttttcatataagttataa 10154225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 4420556 - 4420605
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  4420556 ttatgtataagctacttctataacaaaagataaaataaagtcaaactgtt 4420605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 6310355 - 6310290
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| |  ||||||||||||||||| |||||||||| || |||| |||||||||||||||    
T  6310355 ttatgtataatcaatttctataacaaaagatgaagtaaagtctaattgttttcatataagctataa 6310290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 22742305 - 22742370
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||| ||| ||||||||| |||||| |||||||||| |||| |||||||||||||||    
T  22742305 ttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataa 22742370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 24836330 - 24836265
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||||||||||||||| |||||||||| |||| || ||||| ||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataaactataa 24836265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 281974 - 281914
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| || ||||||||||||||||| |||||||||  |||| |||||||||||||||    
T  281974 tataagctattcctataacaaaagataaaataaagtcaacttgttttcatataagctataa 281914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 326399 - 326462
Alignment:
Q  33 aagctgtttctataacaaaagataaa-gtaaagtcaaactgttatcatataagctataatcttt 95  Q
    ||||| |||||||||||||||||||| | ||||||||||||||  ||| |||||||||||||||    
T  326399 aagctatttctataacaaaagataaaaggaaagtcaaactgtttacatttaagctataatcttt 326462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 18604736 - 18604677
Alignment:
Q  32 taagctgtttctataacaaaagataaagt-aaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||| |||| ||||||||    
T  18604736 taagctgtttctataacaaaagataaaataaaagtcaaattgttatgatatgagctataa 18604677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 23 - 86
Target Start/End: Complemental strand, 20671998 - 20671935
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||||| |||||| | ||||||||||| |||||||||| |||| || ||||||||    
T  20671998 gattatgtataagctatttctagatcaaaagataaaataaagtcaaattgttttcgtataagct 20671935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 24782004 - 24782121
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa---tctttaat-cgctatcttagagagcttatgaaaataa 126  Q
    ||||||| |||||||||||||||||||| | || ||||| |||| ||||||||| |||||    |||||||   ||||| | ||||||||||||||||||    
T  24782004 ataagctatttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatccttgagagcttatgaaaataa 24782103  T
Q  127 actgaaataagcttatga 144  Q
    ||| |||  |||||||||    
T  24782104 actaaaaatagcttatga 24782121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 2027530 - 2027472
Alignment:
Q  32 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| ||| |||||||||||||||| |||||||||||| || |||||||| ||||||    
T  2027530 taagctatttttataacaaaagataaaataaagtcaaactattttcatataacctataa 2027472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 2514641 - 2514687
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||    
T  2514641 ttatgtataagctatttctataataaaagataaaataaagtcaaact 2514687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10400208 - 10400273
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaag-taaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||| ||||| ||||||||||  |||||||||| ||||||||||||||||||||    
T  10400208 ttatgtataagctattt-tataataaaagataaaaataaagtcaaattgttatcatataagctataa 10400273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 2727987 - 2727922
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||| |||||||||||||||||||  ||| ||||| |||  | |||||||||||||    
T  2727987 ttatgtataagctgcttctataacaaaagataaacaaaaatcaaattgtattgatataagctataa 2727922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 4006653 - 4006718
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| | ||||||||||||| |||||| |||||||||| |||| | |||||||||||||    
T  4006653 ttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataa 4006718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 9093687 - 9093622
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||||| |||||||| ||||||||||| |||||| ||| |||| || ||||||||||||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataa 9093622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10016484 - 10016549
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||| | ||||||||||| |||| | |||||||| |||||||||| ||||    
T  10016484 ttatgtataagctatttctaaaccaaaagataaaataaatttaaactgttctcatataagccataa 10016549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 21959671 - 21959732
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| |||| ||||||||||||||| |||||||||  ||||  ||||||||||||||    
T  21959671 gtataagctatttccataacaaaagataaaataaagtcaatttgtttgcatataagctataa 21959732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 29940739 - 29940796
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||| |||||||||||||||||||| |||||||||  |||| |||| ||||||    
T  29940739 gtataagctttttctataacaaaagataaaataaagtcaatttgttttcatttaagct 29940796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 30784501 - 30784542
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  30784501 tataagctttttctataacaaaagataaaataaagtcaaact 30784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 30865425 - 30865478
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatata 82  Q
    |||| |||| |||||||||||||||||||| |||||||||||||| | ||||||    
T  30865425 gtatgagctatttctataacaaaagataaaataaagtcaaactgtgaccatata 30865478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 33068692 - 33068627
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||||||||||||||| |||  |||||||||| ||| ||||| |||||    
T  33068692 ttatgtataagttatttctataacaaaagataaaataatatcaaactgttttcaaataagatataa 33068627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 33259755 - 33259820
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||| |||||||||||||||| | |||||| |||||| || |||| |||||||    
T  33259755 ttatgtataagctatttttataacaaaagataaattgaagtcatactgttttcctatatgctataa 33259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 264310 - 264414
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatcgctatcttagagagcttatgaaaat 124  Q
    |||| |||||||| |||||| | ||||||||||| |||||| |||  ||| || | ||||||||    ||| || |||||||| |||| |||||||||||    
T  264310 ttatatataagctatttctaaagcaaaagataaaataaagttaaatcgttttcgtctaagctat----tttcatagctatcttggagaacttatgaaaat 264405  T
Q  125 aaactgaaa 133  Q
    |||||||||    
T  264406 aaactgaaa 264414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 3204658 - 3204611
Alignment:
Q  40 ttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||||| |||||||||| ||||||| ||||||| ||||||||||||    
T  3204658 ttctataataaaagataaaataaagtcgaactgttttcatataagcta 3204611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 4247765 - 4247711
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||||| ||||||||||||||||||||  ||| |||||||||| |||||    
T  4247765 ttatgtataagctatttctataacaaaagataaa-aaaattcaaactgttgtcata 4247711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 7785855 - 7785808
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| ||||||||||| |||||||||||| || |||||||||||||||    
T  7785855 tataccaaaagataaaataaagtcaaactcttttcatataagctataa 7785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 34429823 - 34429756
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| | ||||||||| || ||||||| ||||||| ||||||| || ||||| ||||||    
T  34429823 gattatgtataagttatttctataataagagataaaataaagtctaactgttttcttataaactataa 34429756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 7479219 - 7479173
Alignment:
Q  44 ataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||||||| ||||||||||  ||||||||| |||||    
T  7479219 ataacaaaagataaagtaaggtcaaactgtcttcatataagttataa 7479173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 7713983 - 7714025
Alignment:
Q  44 ataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||||| |||||||||| |||| |||||||||||    
T  7713983 ataacaaaagataaaataaagtcaaattgttttcatataagct 7714025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 34544581 - 34544539
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtca 67  Q
    ||||||||||| | |||||||||||||||||||| ||||||||    
T  34544581 ttatgtataagttatttctataacaaaagataaactaaagtca 34544539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 2034569 - 2034509
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||||||| || |||||| |||||| ||||||||||||  | |||||||||||    
T  2034569 ttatgtataagctgtttttacaacaaa-gataaaataaagtcaaactactttcatataagct 2034509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 3155115 - 3155180
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| | ||| | ||||||||||||  ||||||||||||||  ||||||| ||||||    
T  3155115 ttatgtataagctatctcttttacaaaagataaaacaaagtcaaactgtttccatataacctataa 3155180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 4308785 - 4308830
Alignment:
Q  226 tttatgtaagtagataagctaaaataagtcaatccaaccaatgtca 271  Q
    ||||||| ||||||||||||||||||| ||||| ||| ||||||||    
T  4308785 tttatgtcagtagataagctaaaataaatcaattcaaacaatgtca 4308830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 7354145 - 7354202
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||| || |||||||||||||||||||| |||| || |||| || |||||||||    
T  7354145 atgtataaactatttctataacaaaagataaaataaaatcgaactattttcatataag 7354202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 24774697 - 24774746
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||| ||||| || |||||||||||||| ||||| |||||||||||||||    
T  24774697 ttatatataaactatttctataacaaaatataaaataaagtcaaactgtt 24774746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 27857334 - 27857378
Alignment:
Q  45 taacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||    
T  27857334 taacaaaagataaaataaagtcaaactgtt-taatataagctataa 27857378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 27893980 - 27894049
Alignment:
Q  19 aagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||| ||||||||||||| |||||| |||| || ||||| |||||||||| |||| | |||||| ||||    
T  27893980 aagggtttatgtataagctatttctacaacagaatataaaataaagtcaaattgttttaatataaactat 27894049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 31461617 - 31461650
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  31461617 ttatgtataagctatttctataacaaaagataaa 31461650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 32975917 - 32975966
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||| | ||||| |||||||| ||||| |||||||||||||||    
T  32975917 ttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtt 32975966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 33787876 - 33787811
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||||||||||| |||||  ||||||||| || | ||||||||| |||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataa 33787811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 9e-17; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 35135793 - 35135728
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  35135793 ttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataa 35135728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14295454 - 14295510
Alignment:
Q  34 agctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  14295454 agctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataa 14295510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 29117063 - 29116998
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||||| | | |||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  29117063 gattatgtatatgttatttctataacaaaagataaaataaagtcaaactgttttcgtataagctat 29116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 37063205 - 37063146
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||||| || |||||||||||||||||||| |||||||||||| || |||||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaaactattttcatataag 37063146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 28586897 - 28586839
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    |||||||||  || |||||||||||||||||||| ||||||||||||||| ||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaagtcaaactgttttcatataa 28586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 7096258 - 7096213
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaac 70  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||    
T  7096258 ttatgtataagctatttctataacaaaagataaaataaagtcaaac 7096213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 12407792 - 12407727
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||||||||| |||||| || ||||| |||| |||| |||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagtaaatctgttttcatgtaagttataa 12407727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 16889674 - 16889739
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||||||||| | ||| |||||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataa 16889739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 32059719 - 32059655
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||||| | |||| || |||||| ||||||||||||||| |||||||||||||||    
T  32059719 ttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataa 32059655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 39128578 - 39128643
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||  ||||||||||||||||||| |||||||||| |||| ||| |||| ||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaaattgttctcaaataaactataa 39128643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 583886 - 583839
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  583886 tataacagaagataaaataaagtcaaactgttttcatataagctataa 583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 985573 - 985635
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||| | | |||| ||||||||||||||| ||||||||||||||| ||| |||||||||    
T  985573 tatgtatatgttatttccataacaaaagataaaataaagtcaaactgttttcacataagctat 985635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 14714972 - 14714903
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    ||||||||||||||| |||||||||||||| |||||  ||||| || ||||| |||||||||||| |||||    
T  14714972 gattatgtataagctatttctataacaaaacataaa-caaagttaagctgttttcatataagctagaatct 14714903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 20982266 - 20982208
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| | ||| ||||||||    
T  20982266 ttatgtataagctatttctataacaaaggataaaataaagtcaacccgttttcatataa 20982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 4855637 - 4855702
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| ||| |||||||||| ||||| |||||| ||| |||||||||||||| |||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataa 4855702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 18704166 - 18704102
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||||||||||||||| ||||||||| || || | |||||||||||||    
T  18704166 ttatgtataagttatttctataacaaaagataaa-taaagtcaagctatttttatataagctataa 18704102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 19177418 - 19177483
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||| |||| |||||||| | ||||| ||||||| |||||||||||||||    
T  19177418 ttatgtataaactatttctacaacagaagataaaattaagtctaactgttttcatataagctataa 19177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 36539685 - 36539750
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||| ||| | || ||||||||||| ||||||||| ||||| |||||||||||||||    
T  36539685 ttatgtgtaagctatttgtttatcaaaagataaaataaagtcaacctgttttcatataagctataa 36539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 14599436 - 14599369
Alignment:
Q  25 ttatgtataagctgtttctataacaaaa--gataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||| ||||||||||||||  |||||| | ||||||||||||| ||||||||| |||||    
T  14599436 ttatgtttaagctatttctataacaaaactgataaaattaagtcaaactgttttcatataagttataa 14599369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 88
Target Start/End: Complemental strand, 32969241 - 32969185
Alignment:
Q  32 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||| |||||||||||||||||||||| |||||||||| | || | |||||||||||    
T  32969241 taagttgtttctataacaaaagataaaataaagtcaaattatttttatataagctat 32969185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 40048411 - 40048371
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagt 65  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  40048411 ttatgtataagttgtttctataacaaaagataaaataaagt 40048371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 42569103 - 42569043
Alignment:
Q  33 aagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    ||||| |||||||| ||||||||||| ||||||| || |||| || |||||||||||||||    
T  42569103 aagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataatct 42569043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 12595859 - 12595808
Alignment:
Q  37 tgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||||||||||||| |||||| ||| |||| |||||||| ||||    
T  12595859 tgtttctataacaaaagataaaataaagttaaattgttttcatataaactat 12595808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 37968825 - 37968892
Alignment:
Q  20 agggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||| ||| ||||||||| |||||||||||||||||||| | | |||||| |||| ||||| ||||||    
T  37968825 agggcttaggtataagctatttctataacaaaagataaaatgaggtcaaagtgttttcatagaagcta 37968892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 86
Target Start/End: Complemental strand, 9860930 - 9860868
Alignment:
Q  24 attatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    |||||||||||||| |||||| |||||| || ||| |||| |||||| ||| |||||||||||    
T  9860930 attatgtataagctatttctagaacaaatgacaaaataaaatcaaaccgttttcatataagct 9860868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 13224368 - 13224406
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaa 63  Q
    ||||||||||||| |||||||||||||||||||| ||||    
T  13224368 ttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 28578834 - 28578880
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||| ||||||||||| |||||||| ||||||||| |||||    
T  28578834 tgtataagctatttctataacataagataaaataaagtcaagctgtt 28578880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 34690813 - 34690855
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtca 67  Q
    ||||||||| ||| |||||||||||||||||||| ||||||||    
T  34690813 ttatgtatacgctatttctataacaaaagataaaataaagtca 34690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 1773556 - 1773523
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  1773556 ttatgtataagctatttctataacaaaagataaa 1773523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 9202879 - 9202814
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||| ||||| || ||||||||||| |||||| ||| |||| |||||||||| ||||    
T  9202879 ttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataa 9202814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 10280707 - 10280658
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||| ||| ||| |||||||||||||||||| | |||||||||||||||    
T  10280707 ttatgcatatgctatttctataacaaaagatagaataaagtcaaactgtt 10280658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12460131 - 12460098
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaa 12460098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 21782700 - 21782651
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||| |||||| ||||||||||||||| |||| |||||||||| ||||    
T  21782700 ttatgtttaagctatttctataacaaaagctaaaataaagtcaaattgtt 21782651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 29588819 - 29588883
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||| ||||| ||| |  ||| |||| |||||||||||||||    
T  29588819 ttatgtataagctatttctataacaaaatataaaataatg-aaaattgttttcatataagctataa 29588883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 31694457 - 31694506
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||| ||||||| | |||||||||||| ||||| |||||||||||||||    
T  31694457 ttatgaataagctatgtctataacaaaacataaactaaagtcaaactgtt 31694506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 32172592 - 32172657
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||| ||||||||||||| | |||||||  ||||  ||||||||||||||    
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataa 32172657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 35960353 - 35960417
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| |||| || ||||||||| |||||||||| |||||||||||| || |||||||| ||||||    
T  35960353 ttatgcataaactatttctataataaaagataaaataaagtcaaactatt-tcatataaactataa 35960417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 38047986 - 38047929
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatata 82  Q
    ||||||||||||| | ||| |||||||||||||| |||||||||| | || |||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatata 38047929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 39750102 - 39750147
Alignment:
Q  45 taacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||| |||||||||||| || ||||||||| |||||    
T  39750102 taacaaaagataaaataaagtcaaactattttcatataagttataa 39750147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 9e-17; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 29430687 - 29430759
Alignment:
Q  17 acaagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| ||||||||||||| ||||||||||||||| |||| ||||||||||||||| || ||||||||||||    
T  29430687 acaagggtttatgtataagctatttctataacaaaagttaaa-taaagtcaaactgttttcttataagctataa 29430759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 17952832 - 17952770
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||| || ||||||||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagcta 17952770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 147
Target Start/End: Original strand, 5133711 - 5133837
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa----tctttaatcgctatcttagagagcttatga 120  Q
    ||||||||||||| |||||||||||||||||||| |||||  |||||||| | ||||||| |||||    | || ||  | ||||| ||||||||||||     
T  5133711 ttatgtataagctatttctataacaaaagataaaataaagataaactgtttttatataagatataagctgttttcaaaagttatctaagagagcttatgg 5133810  T
Q  121 aaataaactgaaataagcttatgacca 147  Q
    |||||| ||||||  ||||||||||||    
T  5133811 aaataagctgaaagtagcttatgacca 5133837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10143111 - 10143176
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||||||||||||||| | ||||||||||||| | |||||||||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataa 10143176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 18962169 - 18962104
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| ||| |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  18962169 ttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataa 18962104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 82
Target Start/End: Complemental strand, 40837557 - 40837502
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatata 82  Q
    ||||||||||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaaattgttttcatata 40837502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 25790065 - 25790127
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    ||||||||||  | ||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  25790065 ttatgtataatatatttctataaaaaaagataaagtgaagtcaaactgttttcatataagcta 25790127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 31740091 - 31740025
Alignment:
Q  25 ttatgtataa-gctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| ||| |||||||||| ||||||||| |||||||||||| || |||||||||||||||    
T  31740091 ttatgtataaagctatttctataactaaagataaaataaagtcaaactattttcatataagctataa 31740025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 88
Target Start/End: Original strand, 14209223 - 14209279
Alignment:
Q  32 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||| |||| ||||||||||||||| |||| |||||||||| |||||||||||||    
T  14209223 taagctatttcaataacaaaagataaaataaattcaaactgttttcatataagctat 14209279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 32098439 - 32098384
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||| |||||||| |||||||||||||||||||| |||||||||| |||| |||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaaagtgttttcata 32098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 33192146 - 33192197
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| |||||||| ||||||||||||||| ||||||||| |||||    
T  33192146 tttctataacataagataaaataaagtcaaactgttttcatataagttataa 33192197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 28803637 - 28803575
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||| |||||| | |||| ||||||||||||||| ||||||||||||| | ||||||||||||    
T  28803637 ttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagcta 28803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 33256694 - 33256744
Alignment:
Q  40 ttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| ||||||| ||||||||||||||| |||||||| ||||||    
T  33256694 ttctataacaatagataaaataaagtcaaactgttttcatataaactataa 33256744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 4550716 - 4550781
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| |||||| |||| |||||||||| ||| ||||| ||||| |||||||| ||||||    
T  4550716 ttatgtataagttgtttccataataaaagataaaataacgtcaagctgttttcatataaactataa 4550781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 5045288 - 5045239
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| |||||    
T  5045288 ttatgtataagctatttttataacaaaagataaaataaagtcaagctgtt 5045239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 11344415 - 11344350
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| | ||||||||||||||||||||  ||||||||| |||| ||||| |||||||||    
T  11344415 ttatgcataagatatttctataacaaaagataaaagaaagtcaaattgttttcatacaagctataa 11344350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 13866828 - 13866893
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||||| ||||||||||| | ||||||||||||| | |||||| ||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaaactgtttttatataatctataa 13866893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 25609735 - 25609800
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||||| |||||||||| |||||||||  | || || ||||||||||||    
T  25609735 ttatgtataagctatttctataagaaaagataaaataaagtcaatttattttcgtataagctataa 25609800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 34055032 - 34054983
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||| ||| |||||||||||||||||||| ||||| |||||||||    
T  34055032 ttatgtataggctatttctataacaaaagataaaataaaggcaaactgtt 34054983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 37053533 - 37053598
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||  || ||||||||||| || ||||| ||||||||||||||| ||||||||| |||||    
T  37053533 ttatgtatagactatttctataacagaaaataaaataaagtcaaactgttttcatataagttataa 37053598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 9478238 - 9478302
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||||| |||||||||||  ||||||| |||| ||||| | || ||||||||||||||    
T  9478238 ttatgtataagctatttctataacagtagataaaataaactcaaaatattttcatataagctata 9478302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 11513858 - 11513902
Alignment:
Q  46 aacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||| |||| |||||||||||||||    
T  11513858 aacaaaagataaaataaagtcaaattgttttcatataagctataa 11513902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 28902016 - 28902080
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||||| ||| ||||||| ||| |||| |||| | |||||||| ||||||||||||||    
T  28902016 ttatgtataagctatttttataacataagttaaaataaaattaaactgttttcatataagctata 28902080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 31461377 - 31461421
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaa 69  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||    
T  31461377 ttatatataagctatttctataacaaaagataaaataaagtcaaa 31461421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 35459847 - 35459911
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||| |||||||||| ||| |||| ||||||||||| |||||||||| |||| || |||||||||    
T  35459847 gattttgtataagctatttgtataccaaaagataaaataaagtcaaattgttttcgtataagcta 35459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 38239682 - 38239638
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaa 69  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||    
T  38239682 ttatgtataagctatttctataacaaaagataaaatcaagtcaaa 38239638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 86
Target Start/End: Original strand, 3458614 - 3458657
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    |||||||||||||||| |||||||||||| || |||||||||||    
T  3458614 tataacaaaagataaaataaagtcaaacttttttcatataagct 3458657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 14666493 - 14666552
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| |||||  ||||||||||||||| ||||||||||||| | ||||||||| |||||    
T  14666493 ataagttgttttgataacaaaagataaaataaagtcaaactgatttcatataagttataa 14666552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 15171189 - 15171244
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||| |||| |||||    
T  15171189 ttatgtataagttttttctataacagaagataaattaaagtcaaaatgttttcata 15171244  T

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Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 13630412 - 13630354
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||||||| | ||||| || ||||||||||  ||||||||||||||| ||||||||    
T  13630412 ttatgtataagttatttctctatcaaaagataagataaagtcaaactgttttcatataa 13630354  T

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Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 29429866 - 29429824
Alignment:
Q  47 acaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||    
T  29429866 acaaaagataaaataaagtcaaactgttttcacataagctata 29429824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 90
Target Start/End: Complemental strand, 30537651 - 30537593
Alignment:
Q  32 taagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||||||| |||||| |  ||||||||||| ||| |||||||||||||||    
T  30537651 taagctatttctataactaaagatcatataaagtcaaacagttttcatataagctataa 30537593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 33942112 - 33942154
Alignment:
Q  48 caaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| ||||||||||||||| |||| ||||||||||    
T  33942112 caaaagataaaataaagtcaaactgttttcatgtaagctataa 33942154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 144
Target Start/End: Complemental strand, 43529963 - 43529866
Alignment:
Q  44 ataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatcgctatcttagagagcttatgaaaataaactgaaataagcttatg 143  Q
    ||||||||||||||| |||| |||||||| | || ||||| ||||||  | |  ||   ||| |||||||||||||||||||||||||||  ||||||||    
T  43529963 ataacaaaagataaaataaaatcaaactgctttcctataatctataagttgttttc---atcctagagagcttatgaaaataaactgaaaatagcttatg 43529867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 3673746 - 3673811
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| || | |||||||||||||| ||||| |||||| ||| |||| ||||||||| |||||    
T  3673746 ttatgtattagttatttctataacaaaatataaaataaagttaaattgttttcatataagttataa 3673811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 87
Target Start/End: Complemental strand, 5043666 - 5043629
Alignment:
Q  50 aaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    ||||||||| ||||||||||||||| ||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagcta 5043629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 7825194 - 7825231
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagt 65  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  7825194 tgtataagctatttttataacaaaagataaagtaaagt 7825231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 13864589 - 13864630
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtc 66  Q
    ||||||||||||| ||||||||||||||| |||| |||||||    
T  13864589 ttatgtataagctatttctataacaaaaggtaaaataaagtc 13864630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 15967609 - 15967674
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||| ||| ||||| |||||  | |||||||||||| || |||||||| ||||||    
T  15967609 ttatgtataagctgtctctgtaacacaagatgtaataaagtcaaactattttcatataaactataa 15967674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 27288572 - 27288621
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||| ||| ||||||||||| |||||||||| |||| ||||||||||    
T  27288572 ttatgtaaaagttgtttctataataaaagataaaataaaatcaaactgtt 27288621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 33267647 - 33267586
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    |||||||||| || |||||||||||||   |||| |||||| |||||||| |||||||||||    
T  33267647 ttatgtataatctatttctataacaaacagtaaaataaagttaaactgttttcatataagct 33267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 33576725 - 33576676
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||| | | |||||||||||||||||| | |||||||||||||||    
T  33576725 ttatgtataggttatttctataacaaaagatacaataaagtcaaactgtt 33576676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 35755633 - 35755568
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||  ||| | ||| |||||||||| |||| |||| ||||||||||    
T  35755633 ttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataa 35755568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 37033983 - 37034028
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaac 70  Q
    |||||||||| || ||||||||| |||||||||| |||||||||||    
T  37033983 ttatgtataaactatttctataaaaaaagataaaataaagtcaaac 37034028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41033081 - 41033048
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  41033081 ttatgtataagctatttctataacaaaagataaa 41033048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 43141834 - 43141875
Alignment:
Q  49 aaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||||||||| ||||  ||||||||||||||    
T  43141834 aaaagataaagtaaagtcaaattgtttccatataagctataa 43141875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 9e-17; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 15360833 - 15360898
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| || | |||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  15360833 ttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataa 15360898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 44032130 - 44032065
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||| |||||||||||||||| |||| |||||||||| |||| |||||||||||||||    
T  44032130 ttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataa 44032065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 23895274 - 23895338
Alignment:
Q  24 attatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||| |||||    
T  23895274 attatgtataagctatttctataacaaaagataaaataaattcaaactgttctcatatatgctat 23895338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 45999417 - 45999354
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||| | |||||||||||||||    
T  45999417 atgtataagctatttctataacaaaagataagataaagtcaaactgctttcatataagctataa 45999354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 17423070 - 17423004
Alignment:
Q  25 ttatgtataagctgtttctataacaaaa-gataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||| ||| | |||||||||||||||    
T  17423070 ttatgtataagctttttctataacaaaacgataaaataaagtcaagctgatttcatataagctataa 17423004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 44936707 - 44936653
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    |||||||||||||||||||  |||||||||||| || ||||||||||||||||||    
T  44936707 tttctataacaaaagataagataaagtcaaactattttcatataagctataatct 44936653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 90
Target Start/End: Original strand, 49517012 - 49517074
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| | |||||||||||||||||||| |||||||||| |||| |||| ||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataa 49517074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 29007847 - 29007782
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||| | |||||||||||||||| ||| |||||||||||| || |||||||||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataa 29007782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 33527278 - 33527213
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||||| |||||| ||||||||||||| || |||||||||||| |||||||| ||||||    
T  33527278 ttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataa 33527213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 36151636 - 36151571
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||| ||||||||||||||| |||||||||| |||| || |||||| |||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataa 36151571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 48830207 - 48830142
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | ||||||| || ||||||||| |||||||||||| || |||||||||||||||    
T  48830207 ttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataa 48830142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 27738297 - 27738245
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    |||||| ||||||||||||| |||||||||| |||| ||||||||||||||||    
T  27738297 tttctacaacaaaagataaaataaagtcaaattgttttcatataagctataat 27738245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 88
Target Start/End: Original strand, 6074417 - 6074476
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||| ||||||||||||||||| |  |||||| |||||||| |||||||||||||    
T  6074417 gtataagctatttctataacaaaagatgatataaagttaaactgttttcatataagctat 6074476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 30815766 - 30815707
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||| |||||| |||||||||||||||||||| |||||| ||||| || |||||||||    
T  30815766 ttatgtctaagctttttctataacaaaagataaaataaagttaaactattttcatataag 30815707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 50319231 - 50319274
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaa 68  Q
    ||||||||||||| |||||||||||||||||||| |||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 15799643 - 15799709
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    ||||||||| | ||||||| |||||||| |  || ||||||||||||||| ||||||||||||||||    
T  15799643 ttatgtatatgatgtttctttaacaaaaaaagaaataaagtcaaactgttttcatataagctataat 15799709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 18434595 - 18434545
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||| ||||||||||||||| ||||||||||||| | ||||||||||||||    
T  18434595 tttccataacaaaagataaaataaagtcaaactgctctcatataagctata 18434545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 4276763 - 4276702
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| || |||||||||||||||||||  |||||||| |||||| ||| |||||||||||    
T  4276763 gtataaactatttctataacaaaagataatataaagtcatactgttttcacataagctataa 4276702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 30259610 - 30259553
Alignment:
Q  33 aagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| |||||||||||||| ||||| ||||||||||||| | | |||||||||||||    
T  30259610 aagctatttctataacaaaatataaaataaagtcaaactgctttgatataagctataa 30259553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 4200168 - 4200232
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||| |||||| | ||| |||||||||||||||| |||||||||  |||| ||||||||||||||    
T  4200168 ttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctata 4200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 7200968 - 7200908
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| |||| |||||||||| |||||||||||  ||||||||||||| ||||    
T  7200968 tataagctatttccataataaaagataaaataaagtcaaacgattatcatataagccataa 7200908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 15361650 - 15361717
Alignment:
Q  25 ttatgtataagctgtttctataacaaa--agataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| ||| || |||||||||||||  |||||||||||||||||| | || |||||||||||||||    
T  15361650 ttatgtgtaaactatttctataacaaagaagataaagtaaagtcaaattattttcatataagctataa 15361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 35080201 - 35080141
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagc 85  Q
    |||| |||||||  |||||||||||||| ||||| |||||||||||||||  |||||||||    
T  35080201 ttatatataagcaatttctataacaaaaaataaaataaagtcaaactgtttccatataagc 35080141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 46980259 - 46980195
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| ||||| ||||| |||| ||||||||||| ||||| ||||||||| ||||||||| |||||    
T  46980259 tatgcataagttgtttttatatcaaaagataaaataaagacaaactgttttcatataagttataa 46980195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 50998491 - 50998555
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||||| ||||| ||||||||||||||  ||| |||||||  | ||||||||||||||    
T  50998491 ttatgtataagctatttctgtaacaaaagataaaacaaaatcaaactactttcatataagctata 50998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 1879144 - 1879097
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||| |||||||| |||||||||| |||| |||||||||||    
T  1879144 tttctataacagaagataaaataaagtcaaaatgttttcatataagct 1879097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 4363745 - 4363698
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||||||    
T  4363745 tataacaaaagattaaataatgtcaaactgttttcatataagctataa 4363698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 13037803 - 13037838
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagt 60  Q
    ||||||||||||| ||||||||||||||||||||||    
T  13037803 ttatgtataagctatttctataacaaaagataaagt 13037838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 23544771 - 23544708
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||||||| |||||||   |||||||||| | |||||||| |||| |||||||||||||    
T  23544771 ttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctat 23544708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 89
Target Start/End: Complemental strand, 28788648 - 28788605
Alignment:
Q  46 aacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||    
T  28788648 aacaaaggataaaataaagtcaaactgttttcatataagctata 28788605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 30371105 - 30371152
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  30371105 tataacaaaagataaaataaactcaaattgttttcatataagctataa 30371152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 38651540 - 38651485
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||||||||||||  ||||||||||||||||||| ||||||| || |||| |||||    
T  38651540 ttatgtataagctaattctataacaaaagataaactaaagtcgaattgttttcata 38651485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 43420019 - 43420066
Alignment:
Q  24 attatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    |||||||||||||| |||| ||||| ||||||||| ||||||||||||    
T  43420019 attatgtataagctatttccataacgaaagataaaataaagtcaaact 43420066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 45990187 - 45990124
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| ||| ||| |||| ||||||||||| |||||| ||| |||| |||||||||||||||    
T  45990187 atgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataa 45990124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 3224364 - 3224426
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||| ||| ||||||||| ||| ||||||||||||| ||   ||||||||||||||    
T  3224364 atgtataagctatttatataacaaaggatcaagtaaagtcaaattgaattcatataagctata 3224426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 5756813 - 5756759
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||||| ||||||||||||||||| |  |||||| |||||||| ||||||||    
T  5756813 gtataagctatttctataacaaaagatgatataaagttaaactgttttcatataa 5756759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 6031607 - 6031545
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||||||| ||||| ||| | ||||||||| ||||| || ||||||    
T  6031607 tgtataagctgttactataacaaaatataaaataatgccaaactgttttcataaaaactataa 6031545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 227 - 265
Target Start/End: Complemental strand, 10199365 - 10199327
Alignment:
Q  227 ttatgtaagtagataagctaaaataagtcaatccaacca 265  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  10199365 ttatgttagtagataagctcaaataagtcaatccaacca 10199327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 18420963 - 18420921
Alignment:
Q  47 acaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||||||||| |||||||||| |||| ||||||||||||||    
T  18420963 acaaaagataaaataaagtcaaaatgttctcatataagctata 18420921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 37841939 - 37842001
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||| || |||||||||| |||||| |||||| ||| |||| || |||||||||||    
T  37841939 atgtataagctattcctataacaaatgataaaataaagttaaattgttttcgtataagctata 37842001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 39777616 - 39777666
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||||||||||||||| | ||||||||||||| | ||||| ||||||||    
T  39777616 tttctataacaaaagatagaataaagtcaaactgctttcatacaagctata 39777666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 43420198 - 43420256
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||||||||| |||| ||||| ||||||||| |||||||||||| || | |||||||    
T  43420198 tatgtataagctatttccataacgaaagataaaataaagtcaaactttttttatataag 43420256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 44928287 - 44928221
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    ||||||||||||| ||||  |  ||||||||||  ||||||||| ||||| ||||||||||||||||    
T  44928287 ttatgtataagctatttcagttgcaaaagataagataaagtcaagctgttttcatataagctataat 44928221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 45107562 - 45107627
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    |||| |||||||| ||||||||| |||| ||||| |||||||||||| || ||||||||| ||||||    
T  45107562 ttatctataagctatttctataagaaaa-ataaaataaagtcaaactattttcatataagttataat 45107627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 4256173 - 4256108
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||| ||||||||||| | |||||| ||| | || || ||||||||||||    
T  4256173 ttatgtataagctatttctacaacaaaagatacaataaagttaaattattttcgtataagctataa 4256108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 14737822 - 14737781
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||||||||||||||||||| |||||||||| |||| |||||    
T  14737822 tttctataacaaaagataaaataaagtcaaattgttttcata 14737781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 15437902 - 15437951
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||| ||||| |||||||||||||| ||||| | |||||||||||||    
T  15437902 ttatgtaaaagctatttctataacaaaaaataaaattaagtcaaactgtt 15437951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 17269189 - 17269254
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||| ||||||||  ||| |||||||||| |||| |||||||||| ||||    
T  17269189 ttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataa 17269254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 17420142 - 17420207
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || ||| ||||| |||||||||| ||||||| |||  || |||||||||||||||    
T  17420142 ttatgtataaactatttttataagaaaagataaaataaagtcgaacaattttcatataagctataa 17420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 17631223 - 17631178
Alignment:
Q  34 agctgtttctataacaaaagataaagtaaagtcaaactgttatcat 79  Q
    |||| |||||||||||||||||||| ||||||| ||||||| ||||    
T  17631223 agctatttctataacaaaagataaaataaagtctaactgttttcat 17631178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 32958595 - 32958656
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| ||||||| || ||||||||| | |||||||||| || ||| |||||||||||    
T  32958595 gtataagctctttctatcaccaaagataaaattaagtcaaactattttcagataagctataa 32958656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 34179987 - 34179938
Alignment:
Q  41 tctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||| |||||||||| |||| | || ||||||||||    
T  34179987 tctataacaaaagataaaataaagtcaaattgttttaatctaagctataa 34179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 40304181 - 40304120
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| ||| |||||||||||||||| |||| ||| | |||| ||||||||| |||||    
T  40304181 gtataagctatttatataacaaaagataaaataaaatcacattgttttcatataagttataa 40304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Complemental strand, 40358016 - 40357963
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcat 79  Q
    |||||||||||| ||||||||||||  |||||| |||||||||| |||| ||||    
T  40358016 tatgtataagctatttctataacaatggataaaataaagtcaaattgttttcat 40357963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 43029532 - 43029483
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||| || |||||| ||||||||||||| |||| ||||||||||    
T  43029532 ttatgtataacctatttctacaacaaaagataaaataaattcaaactgtt 43029483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 43372090 - 43372025
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| ||| |||||||||||| ||||||| || ||||||| | || ||| |||||||||||    
T  43372090 ttatgtataggctatttctataacaatagataaaatagagtcaaattattttcacataagctataa 43372025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 52286617 - 52286682
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| | |||||| ||||||||||||| |||||| ||||  || |||||||||||||||    
T  52286617 ttatgaataagatatttctacaacaaaagataaaataaagttaaacaattttcatataagctataa 52286682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 4e-16; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 5006639 - 5006575
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||| || ||||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataa 5006575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 93
Target Start/End: Complemental strand, 39551675 - 39551611
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||| ||||||||||||||||||    
T  39551675 gtataagctatttctataacaaaagatatactaaagtaaaactgttttcatataagctataatct 39551611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 33894562 - 33894622
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||||||||    
T  33894562 ttatgtataagctatttctataacaaaagataaaat-aagtcaaactgttttcatataagct 33894622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 35536046 - 35536111
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||| |||| ||||||||| |||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataa 35536111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 43318653 - 43318598
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||| ||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  43318653 ataagctatttctataacaaatgataaaataaagtcaaattgttatcatataagct 43318598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 45593850 - 45593791
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    ||||||||||||| ||||| |||||||| ||||| ||||||||||||||| |||||||||    
T  45593850 ttatgtataagctatttctgtaacaaaacataaaataaagtcaaactgttttcatataag 45593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 23918912 - 23918970
Alignment:
Q  41 tctataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatc 99  Q
    ||||| |||||||||||| |||||||||| |||| |||||||||||||||||| |||||    
T  23918912 tctattacaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatc 23918970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 144
Target Start/End: Original strand, 28165030 - 28165153
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa----tctttaatcgctatcttagagagcttatga 120  Q
    ||||||||||| | |||||||||||||||||||| | |||||||| |||| | |||||||||||||    ||||||   |||||| | |||||||||||     
T  28165030 ttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatgg 28165129  T
Q  121 aaataaactgaaataagcttatga 144  Q
    ||||||  |||||  |||||||||    
T  28165130 aaataagttgaaaacagcttatga 28165153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 1417203 - 1417268
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || ||| |||||||||||||||| |||||||||| |||| |||||||||| ||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataa 1417268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 2223087 - 2223136
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  2223087 ttatgtataagctatttctataacaaaagataaagaaaagtcaaattgtt 2223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 27481425 - 27481360
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||  ||||||||||||||    
T  27481425 ttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataa 27481360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 49060479 - 49060544
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||| ||||| |||||||||| | || | |||||||||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataa 49060544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 7244641 - 7244696
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||||| |||||||| |||||||||||  |||||||||||||| |||||    
T  7244641 ttatgtataagctatttctatatcaaaagataaaagaaagtcaaactgttttcata 7244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 18749927 - 18749880
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||    
T  18749927 tttctataacaaaagataaagtaaagtcaaactatttttatataagct 18749880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 31341133 - 31341180
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactg 72  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagtcaaactg 31341180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Complemental strand, 2048171 - 2048102
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatcttt 95  Q
    ||||||||||||| ||||| || ||||||||||| ||||||||||||| | ||| ||||||||||| ||||    
T  2048171 ttatgtataagctatttcttta-caaaagataaattaaagtcaaactgatttcagataagctataagcttt 2048102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 4572543 - 4572601
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||| | |||||||||||||||||| |||||||||  || ||||||||||||||||    
T  4572543 ataagctatatctataacaaaagataaaataaagtcaatttgatatcatataagctata 4572601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 27626255 - 27626197
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||||||||| |||||||| |||||| |||| |||||||||||| |||| ||||||    
T  27626255 ttatgtataagctatttctatatcaaaagctaaaataaagtcaaactattattatataa 27626197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 35809035 - 35808989
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| |||||||||||||||||||| || |||||||||    
T  35809035 ttatgtataagctatttctataacaaaagataaaatatagtcaaact 35808989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 84
Target Start/End: Complemental strand, 39591593 - 39591539
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    |||||| | |||||||||||||||||||| |||||||||| |||| |||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 3610871 - 3610806
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||| ||||||||||||| | ||| ||||||||| |  ||||||||||||    
T  3610871 ttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataa 3610806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 9527205 - 9527156
Alignment:
Q  41 tctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||| | ||||||||||||||| |||||||| ||||||    
T  9527205 tctataacaaaagatataataaagtcaaactgttttcatataaactataa 9527156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 9872810 - 9872859
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||| | |||||||||||||||| ||||| |||||||||||||||    
T  9872810 ttatgtatatgttgtttctataacaaaatataaaataaagtcaaactgtt 9872859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 27121717 - 27121656
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||| | ||||||||| ||| |||||| |||||||||| |||| |||||||||||    
T  27121717 ttatgtataagatatttctataataaatgataaaataaagtcaaattgttttcatataagct 27121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 28178910 - 28178963
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    ||||||||||| |||||||||||||||||||| |||||||| | |||| |||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtcatattgttttcata 28178963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 45813311 - 45813246
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||| |||||||| ||||||||||| |||||||||  |||| |||||||| ||||||    
T  45813311 ttatttataagctatttctataccaaaagataaaataaagtcaacttgttttcatataatctataa 45813246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 5276163 - 5276227
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||||||||||| ||| |||||||||||||||  ||||||||||| ||| ||| | ||||||||    
T  5276163 ttatgtataagctatttttataacaaaagataacataaagtcaaaccgttttcacaaaagctata 5276227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 7453527 - 7453463
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaa-ctgttatcatataagctataa 90  Q
    ||||||||| | |||||||| ||||||||||| ||||||||||  |||| |||||||||||||||    
T  7453527 atgtataagatttttctatagcaaaagataaaataaagtcaaatttgttttcatataagctataa 7453463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 12235018 - 12234899
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata--atctttaatcgctatcttagagagcttatgaaa 122  Q
    ||||||||||||||| | ||| |||||||||||| ||| ||||| ||||| || |||||| ||||  || ||||   ||| || ||||||||||||| ||    
T  12235018 ttatgtataagctgtatgtatgacaaaagataaaataatgtcaatctgttttcgtataagttataagatttttatgagctttcctagagagcttatggaa 12234919  T
Q  123 ataaactgaaataagcttat 142  Q
    |||| ||||||  |||||||    
T  12234918 ataagctgaaaacagcttat 12234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 17989136 - 17989088
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    |||||||||| ||||| ||||||||||||||| |||||||| |||||||    
T  17989136 tataacaaaatataaaataaagtcaaactgttttcatataaactataat 17989088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 30456572 - 30456516
Alignment:
Q  34 agctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||| ||||||||||||| |||||||||| |||| ||||||||| |||||    
T  30456572 agctatttctaaaacaaaagataaaataaagtcaaattgttttcatataagttataa 30456516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 30496643 - 30496707
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||||||| || |||||||||||||| ||||| |||||||||| |||| || ||||| |||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaaattgttttcgtataacctata 30496707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 42656454 - 42656498
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaa 69  Q
    |||| |||||||| |||||||||||||||||||| ||||||||||    
T  42656454 ttatatataagctatttctataacaaaagataaaataaagtcaaa 42656498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 43153030 - 43152966
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactg-ttatcatataagctataat 91  Q
    |||||||||| |||||||||||||||||||| |||||| ||| || || ||||| ||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagttaaattgtttttcatacaagctataat 43152966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 1423083 - 1423134
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||||| |||  ||||||||||||||| |||| ||||||||||    
T  1423083 gattatgtataagctattttcataacaaaagataaaataaattcaaactgtt 1423134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 74
Target Start/End: Original strand, 2894758 - 2894805
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||| |||||||||||||||||||| ||||||  |||||||    
T  2894758 atgtataagctatttctataacaaaagataaattaaagttgaactgtt 2894805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 9038168 - 9038227
Alignment:
Q  167 ttatgaacacttcataagctgtttctataagttatcctgaaaattctcacaagtgcttat 226  Q
    |||||||||  ||||||||||||| |||||||| | ||||| ||||||| ||||||||||    
T  9038168 ttatgaacatgtcataagctgtttttataagttcttctgaacattctcataagtgcttat 9038227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 12835054 - 12835003
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| ||||||||||||| |||||||||| |||| |||||| ||||||||    
T  12835054 tttctacaacaaaagataaaataaagtcaaattgttttcatattagctataa 12835003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 45777284 - 45777237
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||| | ||||||||||||| |||||||| ||||||    
T  45777284 tataacaaaagataaaattaagtcaaactgttttcatataaactataa 45777237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 95
Target Start/End: Original strand, 992013 - 992079
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatcttt 95  Q
    ||||||| |||||||||||||||| ||||| ||||| |||| | || ||||||||| ||||| ||||    
T  992013 gtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttt 992079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Complemental strand, 5272951 - 5272889
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||||||| || ||| |||||||||||||||| | |||||| | |||| ||||||||||||    
T  5272951 ttatgtataaactatttatataacaaaagataaaattaagtcacattgttttcatataagcta 5272889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 22759125 - 22759187
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||| |||||| ||| |||||||||||||||| |||||  ||| |||| ||||||||||||    
T  22759125 ttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagcta 22759187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 45901180 - 45901214
Alignment:
Q  109 gagagcttatgaaaataaactgaaataagcttatg 143  Q
    ||||||||||||||||||||||||| |||||||||    
T  45901180 gagagcttatgaaaataaactgaaaaaagcttatg 45901214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 46223203 - 46223157
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| |||| ||||||||||||||| ||||||| ||||    
T  46223203 ttatgtataagctatttccataacaaaagataaattaaagtcgaact 46223157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 48157251 - 48157185
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    ||||||||||  | ||||||||| |||||||||| |||||| ||| |||| | ||||||||||||||    
T  48157251 ttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataat 48157185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 5373164 - 5373205
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtc 66  Q
    ||||||||| ||| |||||||||||||||||||| |||||||    
T  5373164 ttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 21453241 - 21453298
Alignment:
Q  33 aagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| |||||||||||||  |||||||||  |||| |||||||||||||||    
T  21453241 aagctatttctgtaacaaaagataagataaagtcaagttgttctcatataagctataa 21453298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 24973883 - 24973932
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||| ||||| |||||||||||||||||||| |||| ||||| ||||    
T  24973883 ttatgtaaaagctatttctataacaaaagataaaataaattcaaattgtt 24973932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 24975845 - 24975906
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||| ||  ||||||||||||||||||| ||||| | ||||||| | |||||||||||    
T  24975845 atgtataatctacttctataacaaaagataaaataaaggcgaactgtttttatataagctat 24975906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 28702699 - 28702732
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    ||||||||||||| ||||||||||||||||||||    
T  28702699 ttatgtataagctatttctataacaaaagataaa 28702732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 86
Target Start/End: Original strand, 30133988 - 30134049
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||| ||| || ||||||||||||| |||||||||  |||| || ||||||||    
T  30133988 ttatgtataagctatttttacaacaaaagataaaataaagtcaacttgttttcgtataagct 30134049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 31002700 - 31002765
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||| |  |||||||||||| |||||||||| | || |||||||||||||||    
T  31002700 ttatgtataaactatttcaaccacaaaagataaaataaagtcaaaatattttcatataagctataa 31002765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 40009409 - 40009458
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||||||| |||||||||||| ||| |||||| ||| ||||    
T  40009409 ttatgtataagctgtttttataacaaaagacaaaataaagttaaattgtt 40009458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 54325165 - 54325103
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| || ||||||| |||||||||||| ||||||||||||||| |||||||||||||||    
T  54325165 tgtataaactatttctattacaaaagataaaataaagtcaaactgttttcatataagctataa 54325103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 87
Target Start/End: Complemental strand, 54327576 - 54327518
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  54327576 gtataagttgtttctataacaaaagataaaacaaagtcaaactgttttcatataagcta 54327518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 30338723 - 30338658
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||||||||||||||| | |||||| |||||||| |||||||||||||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataa 30338658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 21952514 - 21952577
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||| ||||||| ||||||||||||||| |||| | |||||||||||||||| ||||||||||    
T  21952514 ttatgcataagctatttctataacaaaaggtaaaatcaagtcaaactgttatcgtataagctat 21952577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 51044590 - 51044544
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaaact 51044544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 30024639 - 30024704
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| ||||| | |||||||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  30024639 ttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagctataa 30024704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 4191678 - 4191734
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagat-aaagtaaagtcaaactgttatcata 80  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||    
T  4191678 ttatgtataagctatttctataacaaaagataaaaataaagtcaaactgttttcata 4191734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 4071835 - 4071886
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||||| |||||||||| | || |||||||||||||||    
T  4071835 tttctataacaaaagataaaataaagtcaaattattttcatataagctataa 4071886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 24929446 - 24929497
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||||| ||||||| ||||||| ||||| |||||||||    
T  24929446 tttctataacaaaagataaaataaagtctaactgttttcataaaagctataa 24929497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 53626729 - 53626780
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataa 53626780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 22684644 - 22684586
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    |||||||||| ||||||||||||| | |||| |||||||||| |||| |||||||||||    
T  22684644 tgtataagctatttctataacaaacggtaaaataaagtcaaattgttttcatataagct 22684586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 29374018 - 29373952
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    |||| |||||||| ||||||||||| |||||||| ||| |||||| |||  ||||||||||||||||    
T  29374018 ttatatataagctatttctataacagaagataaaataatgtcaaaatgtattcatataagctataat 29373952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 36734832 - 36734890
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    |||||||||| || ||||||||||||||| |||| |||||||||||| || ||||||||    
T  36734832 ttatgtataatctctttctataacaaaaggtaaaataaagtcaaactattttcatataa 36734890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 47970257 - 47970303
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||    
T  47970257 ttatgtataagctatttctataacaaaagataaaatgaagtcaaact 47970303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 6364088 - 6364153
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||| | |  ||| |||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataa 6364153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 9680603 - 9680660
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatata 82  Q
    ||||||||||||| |||| |||| |||||||||| |||||||||| |||| |||||||    
T  9680603 ttatgtataagctatttcgataataaaagataaaataaagtcaaattgttctcatata 9680660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 11389465 - 11389530
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||  | ||||||||| ||||||||||||||||| |||||||| | |||||| ||||||    
T  11389465 ttatgtataaattatttctataaaaaaagataaagtaaagttaaactgttttaatataaactataa 11389530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 20936119 - 20936070
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||||||||||| |||||||||||| || |||| ||||||||    
T  20936119 tttctataacaaaagataaaataaagtcaaactattttcatgtaagctat 20936070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 26520360 - 26520295
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| |||||||||||||||||||| || |||||| ||| |||| || | ||||||||||    
T  26520360 ttatgtataaactgtttctataacaaaagatgaaataaagttaaattgttttcgtgtaagctataa 26520295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 44119293 - 44119228
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | |||||||| |||||||||||  ||||||||  |||| |||||||||||||||    
T  44119293 ttatgtataagttatttctatagcaaaagataaaacaaagtcaatatgttttcatataagctataa 44119228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 45128441 - 45128376
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||| || |||||||||||||||||||| | || ||||| | || |||||||||||||||    
T  45128441 ttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataa 45128376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Original strand, 49219082 - 49219143
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| | |||||||||||||| ||||| |||||||||| | || |||||||||||||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataa 49219143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 52645880 - 52645831
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| |||||||||||||||||||| | || ||||||||||    
T  52645880 ttatgtataagctatttctataacaaaagataaaatcaattcaaactgtt 52645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 27623579 - 27623639
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| | ||| |||||||||||||||| |||||||||||| || | |||||||||||||    
T  27623579 tataagatatttgtataacaaaagataaaataaagtcaaactattttaatataagctataa 27623639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 85
Target Start/End: Original strand, 32724058 - 32724118
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagc 85  Q
    |||||| ||| || ||||||| |||||||||||| |||||||||||| || ||||||||||    
T  32724058 ttatgtctaatctatttctattacaaaagataaaataaagtcaaactattttcatataagc 32724118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44319891 - 44319950
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||||| || ||||||||| |||||||||| ||||||| ||||||| ||||||||||||    
T  44319891 atgtataaactatttctataa-aaaagataaaataaagtcgaactgttttcatataagcta 44319950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 55084533 - 55084489
Alignment:
Q  100 gctatcttagagagcttatgaaaataaactgaaataagcttatga 144  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||    
T  55084533 gctatcttagagagcttatgaaaataagctgaaaccagcttatga 55084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 55870471 - 55870407
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| |  ||| ||||||||||||| || ||||||||||||||| ||| |||||||||||    
T  55870471 tatgtataatccatttttataacaaaagatcaaataaagtcaaactgttttcacataagctataa 55870407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Original strand, 927437 - 927480
Alignment:
Q  47 acaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| || ||||||||||||||| |||||||||||||||    
T  927437 acaaaagatgaaataaagtcaaactgttttcatataagctataa 927480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 2169961 - 2170016
Alignment:
Q  19 aagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||| ||||||||||  |||||||||||||||| ||||| || ||||||||||||    
T  2169961 aagggcttatgtataaattgtttctataacaaaaaataaaatagagtcaaactgtt 2170016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 8130127 - 8130178
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||||||  |||||||||| | || |||||||||||||||    
T  8130127 tttctataacaaaagataacataaagtcaaattattttcatataagctataa 8130178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 19422357 - 19422420
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||||| | |||||||||||||||||| | |||||||||||  || |||||||| ||||    
T  19422357 ttatgtataagttatttctataacaaaagatataataaagtcaaacatttttcatataaactat 19422420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 21952906 - 21952965
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| |||||||||||| |  |||| |||||||||| |||| |||||||||||||||    
T  21952906 ataagctatttctataacaacaagtaaaataaagtcaaattgttttcatataagctataa 21952965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 21953214 - 21953277
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| || |||||||||||||||  ||| |||||||||||| || | |||||||||||||    
T  21953214 atgtataaactatttctataacaaaagggaaaataaagtcaaactctttttatataagctataa 21953277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 24160620 - 24160561
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| |||||||||||||||||||  |||| ||||||| || |||| ||||||||||    
T  24160620 ataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctataa 24160561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 25487676 - 25487613
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    ||||||||||||| |||||||||||||| ||||| ||||||||   | || |||||||||||||    
T  25487676 ttatgtataagctatttctataacaaaaaataaaataaagtcacgtttttttcatataagctat 25487613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 90
Target Start/End: Complemental strand, 43372082 - 43372035
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||||| || |||||||||||| | |||||||||||||    
T  43372082 tataacaaaagataaaatacagtcaaactgtttttatataagctataa 43372035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 44008003 - 44007940
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||| |||||||| || ||||| ||||||||||| ||||| |||| |||| |||||||||||||    
T  44008003 ttatatataagctattactataccaaaagataaaataaagacaaattgttttcatataagctat 44007940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 5131363 - 5131309
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcat 79  Q
    ||||||||||| ||||| |||||||||||||||| |||||| ||| |||| ||||    
T  5131363 ttatgtataagttgtttatataacaaaagataaaataaagttaaaatgttttcat 5131309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 8422968 - 8422905
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||| ||||| |||||||||| |||||||  | |||| |||||||||||||||    
T  8422968 ttatgtataagctatttttataaaaaaagataaaataaagtc--attgttttcatataagctataa 8422905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8703753 - 8703688
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaag--tcaaactgttatcatataagctat 88  Q
    ||||||||||||| ||||| ||||||| ||||||  ||||  |||||||||| |||||||||||||    
T  8703753 ttatgtataagctatttctctaacaaaggataaaaaaaagtatcaaactgttttcatataagctat 8703688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 21193935 - 21194001
Alignment:
Q  23 gattatgtataagctgtttctataacaaaagataaagtaaagtc-aaactgttatcatataagctat 88  Q
    ||||||||||||||| ||| ||||  |||||||||| ||||||| |||||| | |||||||||||||    
T  21193935 gattatgtataagctatttttatagtaaaagataaaataaagtcaaaactgatttcatataagctat 21194001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 30207686 - 30207637
Alignment:
Q  40 ttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||| |||| |||||||||| |||||||||||||||    
T  30207686 ttctataacaaaaaataaaataaa-tcaaactgttttcatataagctataa 30207637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 36048743 - 36048781
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaa 68  Q
    |||||||| |||||||||||||||||||| |||||||||    
T  36048743 tataagctatttctataacaaaagataaattaaagtcaa 36048781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 41097375 - 41097309
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagat-aaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| | |||||||||||||||||||||| ||| | ||||||||||||| |||||| | ||||||    
T  41097375 ttatgtgttagctgtttctataacaaaagataaaaattaagtcaaactgttttcatattacctataa 41097309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 50745939 - 50745997
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    |||||| |||||| ||| |||||||||||||||| |||| |||||||||| | ||||||    
T  50745939 ttatgtctaagctatttttataacaaaagataaaataaaatcaaactgtttttatataa 50745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 4798690 - 4798649
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtc 66  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  4798690 ttatgtataagctatttctatatcaaaagataaaataaagtc 4798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 11802475 - 11802535
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagcta 87  Q
    |||||||||||| || ||||||||||||||||| |||||||||| | || ||| ||||||||    
T  11802475 tatgtataagctatt-ctataacaaaagataaaataaagtcaaatttttctcacataagcta 11802535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 18630619 - 18630684
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||| |||| || |||| ||||||||||||||| |||||||||   ||| |||||||||||||||    
T  18630619 ttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataa 18630684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 20907112 - 20907161
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||||||| ||| ||||| |||||||||| |||||| ||||||||    
T  20907112 ttatgtataagctatttgtataagaaaagataaaataaagtgaaactgtt 20907161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 21157707 - 21157772
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| |||  ||||||||  ||||| ||||||||||||||| |||| ||||||||||    
T  21157707 ttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataa 21157772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 22471270 - 22471335
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||  ||||| |||  ||||||||| ||||| ||||||||| ||||||||| |||||    
T  22471270 ttatgtataagccatttctttaattaaagataaattaaaggcaaactgttttcatataagttataa 22471335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 24443977 - 24444042
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||  |||||| ||||||| ||||| |||| ||||||  || |||||||||||||||    
T  24443977 ttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataa 24444042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 25885798 - 25885863
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| |||||||| ||||||||||| |||||| ||| |||| || | ||||||||||    
T  25885798 ttatgtattagctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataa 25885863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 34368820 - 34368865
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    ||||||||| ||||||||||||||||||||  ||||||||| ||||    
T  34368820 gtataagctatttctataacaaaagataaaacaaagtcaaattgtt 34368865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 35533336 - 35533283
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||||||||||||| |||| | |||||||||| |||||||||| |||| |||||    
T  35533336 atgtataagctgttcctattataaaagataaattaaagtcaaattgttttcata 35533283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 40709511 - 40709478
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaa 58  Q
    |||| |||||||||||||||||||||||||||||    
T  40709511 ttatttataagctgtttctataacaaaagataaa 40709478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 46013431 - 46013366
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| ||| || |||||  ||||||||||||| ||||||||||||||| | ||||||| |||||    
T  46013431 ttatgtgtaaactatttctggaacaaaagataaaataaagtcaaactgtttttatataagttataa 46013366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 787237 - 787172
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||||||||  ||||| |||||||| |||||||||| ||||||||||||||||||||    
T  787237 ttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataa 787172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 6950266 - 6950319
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||    
T  6950266 tataagctgtttttataacaaaagataaagtaaagacaaactgttttcatataa 6950319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 34080395 - 34080332
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| ||||| |||||||||||||| | |||||||||||||| | ||||||||||||    
T  34080395 atgtataagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataa 34080332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 86
Target Start/End: Complemental strand, 37444546 - 37444485
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||||||||||| || |||||||||||||||||||||||| ||| |||| || ||||||||    
T  37444546 ttatgtataagctattactataacaaaagataaagtaaagttaaattgttttcgtataagct 37444485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 42597340 - 42597405
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| |||||||||||||||||||| |||||| ||| |||| ||||  |||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataa 42597405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 1470985 - 1470922
Alignment:
Q  27 atgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| ||||||||| |||||||||| |||||||||| |  | |||||||||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataa 1470922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 10218858 - 10218901
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgt 73  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||    
T  10218858 tataagctgtttccataacaaaagataaaataaagtcaaactgt 10218901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 39392791 - 39392744
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgt 73  Q
    ||||||||| || |||||||||||||||||||| ||||||||||||||    
T  39392791 tatgtataaactatttctataacaaaagataaaataaagtcaaactgt 39392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 89
Target Start/End: Original strand, 2698726 - 2698796
Alignment:
Q  19 aagggattatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    ||||| ||||| ||||||| |||||||| |||||  |||| ||||||| ||||||| ||||||||||||||    
T  2698726 aagggcttatgcataagctatttctatagcaaaaagtaaaataaagtcgaactgttttcatataagctata 2698796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 8066966 - 8066904
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    ||||||||||| |||||||||||||||| ||||||||||||| | | ||||||| ||| ||||    
T  8066966 ataagctgtttatataacaaaagataaaataaagtcaaactggttttatataagttatcatct 8066904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 26215435 - 26215481
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagttaaact 26215481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 31915401 - 31915335
Alignment:
Q  24 attatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||||||||| | |||||||||||||||| | |||||||||| |||| ||||| ||| |||||    
T  31915401 attatgtataagctatatctataacaaaagatagaataaagtcaaattgttttcatacaaggtataa 31915335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 36644001 - 36643947
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||||||||||| ||||||||| |||||||| |||||||||||||| || |||||    
T  36644001 tatgtataagctatttctataataaaagatacagtaaagtcaaactattttcata 36643947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 42370492 - 42370446
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  42370492 ttatgtataagctgtatctgtaacaaaatataaagtaaagtcaaact 42370446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 778575 - 778620
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  778575 tttctataacataagataaaataaactcaaactgttatcatataag 778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 1112792 - 1112857
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| ||| |||||||||||||||||||| ||| || ||| |||| ||| |||||||||||    
T  1112792 ttatgtatatgctatttctataacaaaagataaaataaggttaaattgttttcacataagctataa 1112857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 3537159 - 3537098
Alignment:
Q  28 tgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctata 89  Q
    |||||||||  |||||||| ||||||||||| |||||||||| |||| || |||||||||||    
T  3537159 tgtataagcaatttctatagcaaaagataaaataaagtcaaattgttttcgtataagctata 3537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 4558737 - 4558802
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||||| |||||||||| |||||| ||| | || ||||||| |||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataa 4558802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 11795031 - 11795096
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| ||||||| |||||| ||| | |||||||| |||||| ||||||||| |||||    
T  11795031 ttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataa 11795096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 14482141 - 14482190
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||| || |||||||||||||||||||| |||||||||| ||||    
T  14482141 ttatgtataaactatttctataacaaaagataaaataaagtcaaattgtt 14482190  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 29699193 - 29699258
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| ||| | |||||||||||||||||||| |||||||||| |||| |||| |||| |||||    
T  29699193 ttatgtacaagttatttctataacaaaagataaaataaagtcaaaatgttgtcatctaagttataa 29699258  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 34788554 - 34788493
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||| ||| ||| || ||||||||| |||||||||||||||  ||||||||||||||    
T  34788554 gtataagctatttttatgaccaaagataaaataaagtcaaactgtttccatataagctataa 34788493  T

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Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 6918305 - 6918245
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| ||| ||||| |||||||||| ||||||||||||||| ||  |||||||||||    
T  6918305 tataagctatttatataataaaagataaaataaagtcaaactgttttctaataagctataa 6918245  T

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Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 90
Target Start/End: Complemental strand, 11000687 - 11000627
Alignment:
Q  30 tataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||||| |||| ||||||||||||||| |||||||||| |||| ||  |||||||||||    
T  11000687 tataagctatttccataacaaaagataaaataaagtcaaattgttttcgaataagctataa 11000627  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 11119130 - 11119082
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgt 73  Q
    ||||||||| | | |||||||||||||||||||| ||||||||||||||    
T  11119130 ttatgtatacgatatttctataacaaaagataaaataaagtcaaactgt 11119082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 42237535 - 42237487
Alignment:
Q  43 tataacaaaagataaagtaaagtcaaactgttatcatataagctataat 91  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||||||    
T  42237535 tataacaaaagataaaataaagttaaattgttttcatataagctataat 42237487  T

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Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 10437838 - 10437873
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||||||||||||| |||||||||||||||    
T  10437838 tttctataacaaaagataaaataaagtcaaactgtt 10437873  T

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Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14949827 - 14949882
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcata 80  Q
    |||||||||||||  ||||||||||||||||||| || ||||||||| || |||||    
T  14949827 ttatgtataagctacttctataacaaaagataaaatagagtcaaactcttttcata 14949882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 26056024 - 26056087
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||||||  ||||| ||||||||||||| || || ||||||||| ||| |||||||||    
T  26056024 ttatgtataagctaattctaaaacaaaagataaaatatagccaaactgttctcaaataagctat 26056087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 35534992 - 35534893
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatctttaatcgctatcttagagagcttatgaaaat 124  Q
    |||| |||||||| ||||||||| ||||| |||| ||||||||||||||| |  ||||| || |  || |||   |||||||||||||||||||| ||||    
T  35534992 ttatatataagctatttctataataaaagttaaaataaagtcaaactgtttttgtataaacttt--tcatta---gctatcttagagagcttatggaaat 35534898  T

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Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 40728535 - 40728500
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgtt 74  Q
    |||||||||||||||||||| |||||||||||||||    
T  40728535 tttctataacaaaagataaaataaagtcaaactgtt 40728500  T

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Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 5071098 - 5071040
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    ||||||||||| ||||||||||  |||| ||||| |||||||||||| || ||||||||    
T  5071098 ttatgtataagttgtttctatagtaaaatataaaataaagtcaaacttttttcatataa 5071040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 11188286 - 11188248
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaa 63  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  11188286 ttatgtataagttgtttctataacaaaagataaaataaa 11188248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 26820142 - 26820184
Alignment:
Q  29 gtataagctgtttctataacaaaagataaagtaaagtcaaact 71  Q
    ||||||| | |||||||||||||||||||| ||||||||||||    
T  26820142 gtataagttatttctataacaaaagataaaataaagtcaaact 26820184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 35374490 - 35374436
Alignment:
Q  39 tttctataacaaaagataaagtaaagtcaaactgttatcatataagctataatct 93  Q
    |||||||| | ||||||||| |||||| ||| |||| ||||||||||||||||||    
T  35374490 tttctatagcgaaagataaaataaagttaaattgttttcatataagctataatct 35374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 8536179 - 8536123
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatata 82  Q
    ||||||||||||| |||||||||||||| | ||||| |||||||| |||| |||||||    
T  8536179 ttatgtataagctatttctataacaaaata-aaagtgaagtcaaattgttttcatata 8536123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 9836979 - 9836926
Alignment:
Q  31 ataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataag 84  Q
    ||||||| ||| ||||||||  ||||||||||||||||||| || |||||||||    
T  9836979 ataagctatttttataacaactgataaagtaaagtcaaactattttcatataag 9836926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 10383769 - 10383833
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||||||| ||||| ||| |||||| |||| |||||||||| || || |||||||||    
T  10383769 ttatgtataagctgtttttataataaatgataaaataaa-tcaaactgttttcgtaaaagctataa 10383833  T

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Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 12361131 - 12361196
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||| | |||||||||  ||||||||| | |||||||| |||| |||||||||||||||    
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataa 12361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 25867033 - 25867086
Alignment:
Q  33 aagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagct 86  Q
    ||||| ||||||||||||||||| || |||||||||| | || |||||||||||    
T  25867033 aagctatttctataacaaaagatgaaataaagtcaaaatattttcatataagct 25867086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 27728151 - 27728094
Alignment:
Q  26 tatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataa 83  Q
    |||||| | ||| ||||||||| |||||||||| |||||||||||| || ||||||||    
T  27728151 tatgtacaggctatttctataaaaaaagataaaataaagtcaaactattttcatataa 27728094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 28769470 - 28769405
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| || ||||||||||  ||||| | |||||||||| || || ||||||||||||    
T  28769470 ttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataa 28769405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 29973020 - 29973085
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||| |||||||| ||||| ||||| ||| |||| |||||||||||| || ||| |||||||||||    
T  29973020 ttatatataagctatttctttaacacaaggtaaaataaagtcaaactattttcacataagctataa 29973085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 34770831 - 34770896
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||| || || |||| || |||||||||||| |||||||||| |||| |||| ||||||||||    
T  34770831 ttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataa 34770896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 35869776 - 35869841
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||  |||||| ||||||| ||||| |||| ||||||  || |||||||||||||||    
T  35869776 ttatgtataagcgatttctacaacaaaatataaaataaattcaaacaattttcatataagctataa 35869841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 20118 - 20181
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctat 88  Q
    |||||||||  || |||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  20118 ttatgtatatactatttctataaccaaagataaaataaagtcaaacagttatcatataagctat 20181  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 27515 - 27580
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||| |||| |||||||| ||||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataa 27580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 6620 - 6564
Alignment:
Q  34 agctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| || || ||||| |||||||||||| || |||||||||||||||    
T  6620 agctgtttctatagcataaaataaaataaagtcaaactattttcatataagctataa 6564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 13640 - 13584
Alignment:
Q  34 agctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    ||||||||||||| || || ||||| |||||||||||| || |||||||||||||||    
T  13640 agctgtttctatagcataaaataaaataaagtcaaactattttcatataagctataa 13584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 3843 - 3908
Alignment:
Q  25 ttatgtataagctgtttctataacaaaagataaagtaaagtcaaactgttatcatataagctataa 90  Q
    |||||| |||||| ||| |||||||||||||||| | |||||| |||||| || |||| |||||||    
T  3843 ttatgtgtaagctatttttataacaaaagataaactgaagtcatactgttttcctatatgctataa 3908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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