View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_high_38 (Length: 414)

Name: NF19103_high_38
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_high_38
NF19103_high_38
[»] chr2 (51 HSPs)
chr2 (175-396)||(36417738-36417959)
chr2 (2-175)||(35114656-35114829)
chr2 (2-176)||(18685706-18685880)
chr2 (2-175)||(30326377-30326550)
chr2 (6-175)||(34338681-34338850)
chr2 (2-177)||(32497784-32497959)
chr2 (2-176)||(5278880-5279054)
chr2 (5-175)||(33366481-33366651)
chr2 (2-172)||(2085946-2086116)
chr2 (2-176)||(16104144-16104318)
chr2 (5-176)||(2645135-2645306)
chr2 (2-172)||(17540588-17540759)
chr2 (2-173)||(39461187-39461358)
chr2 (2-164)||(9732976-9733138)
chr2 (2-178)||(37003914-37004091)
chr2 (5-175)||(4641387-4641557)
chr2 (2-158)||(7258784-7258941)
chr2 (2-175)||(37308527-37308699)
chr2 (5-173)||(42706231-42706400)
chr2 (2-175)||(44284508-44284673)
chr2 (2-173)||(18793307-18793478)
chr2 (2-173)||(19513735-19513906)
chr2 (25-175)||(40692176-40692326)
chr2 (2-172)||(30798535-30798703)
chr2 (2-178)||(3913506-3913681)
chr2 (2-176)||(26418793-26418967)
chr2 (6-169)||(42365454-42365617)
chr2 (2-124)||(33889165-33889287)
chr2 (2-173)||(38993117-38993284)
chr2 (2-179)||(9717108-9717268)
chr2 (2-88)||(7761619-7761705)
chr2 (2-177)||(16177929-16178101)
chr2 (4-175)||(13829310-13829480)
chr2 (46-147)||(26981779-26981881)
chr2 (2-178)||(30712726-30712900)
chr2 (1-133)||(32766550-32766681)
chr2 (2-175)||(40832515-40832692)
chr2 (4-76)||(12672522-12672594)
chr2 (11-171)||(27462856-27463014)
chr2 (2-174)||(28824603-28824773)
chr2 (4-173)||(20907468-20907631)
chr2 (8-179)||(10399922-10400087)
chr2 (25-142)||(1247060-1247176)
chr2 (17-169)||(8112183-8112328)
chr2 (2-177)||(6896039-6896212)
chr2 (101-176)||(12672598-12672672)
chr2 (1-136)||(41934492-41934626)
chr2 (2-66)||(12939346-12939410)
chr2 (6-85)||(11114833-11114912)
chr2 (1-85)||(25383092-25383176)
chr2 (1-85)||(45463155-45463238)
[»] chr1 (57 HSPs)
chr1 (2-176)||(844845-845019)
chr1 (2-175)||(16386734-16386907)
chr1 (2-176)||(42510404-42510578)
chr1 (2-175)||(41972792-41972964)
chr1 (5-173)||(16451009-16451177)
chr1 (2-179)||(6711167-6711345)
chr1 (2-179)||(35387432-35387609)
chr1 (2-173)||(24339760-24339929)
chr1 (2-173)||(12890120-12890291)
chr1 (2-173)||(51264377-51264548)
chr1 (2-175)||(28340424-28340597)
chr1 (2-178)||(50540221-50540397)
chr1 (1-176)||(7183797-7183972)
chr1 (2-173)||(45490996-45491167)
chr1 (2-183)||(17887819-17888001)
chr1 (2-175)||(1351556-1351728)
chr1 (2-183)||(44738163-44738343)
chr1 (4-173)||(32270240-32270404)
chr1 (5-174)||(51703287-51703455)
chr1 (5-178)||(25539733-25539905)
chr1 (4-172)||(17327772-17327940)
chr1 (2-169)||(31004019-31004185)
chr1 (8-175)||(50304532-50304698)
chr1 (2-124)||(26118336-26118458)
chr1 (2-174)||(41967970-41968142)
chr1 (2-124)||(30105801-30105923)
chr1 (5-175)||(46154780-46154950)
chr1 (2-127)||(20495012-20495137)
chr1 (4-171)||(38087119-38087285)
chr1 (5-174)||(1601049-1601223)
chr1 (2-173)||(3414974-3415146)
chr1 (2-174)||(38663014-38663185)
chr1 (1-175)||(42512890-42513060)
chr1 (2-181)||(16476276-16476454)
chr1 (1-176)||(39281774-39281948)
chr1 (2-178)||(6029422-6029597)
chr1 (2-174)||(16437259-16437415)
chr1 (2-172)||(6144107-6144276)
chr1 (11-124)||(34663858-34663971)
chr1 (5-169)||(11772756-11772919)
chr1 (2-179)||(26764916-26765087)
chr1 (1-147)||(15540010-15540155)
chr1 (1-76)||(49303474-49303548)
chr1 (5-177)||(16704604-16704776)
chr1 (2-90)||(42705359-42705447)
chr1 (25-170)||(10384253-10384397)
chr1 (5-122)||(45658755-45658871)
chr1 (2-137)||(32289465-32289600)
chr1 (2-85)||(50382524-50382607)
chr1 (128-178)||(30105912-30105962)
chr1 (128-175)||(26118447-26118494)
chr1 (4-116)||(13994198-13994309)
chr1 (1-89)||(32467941-32468029)
chr1 (8-130)||(504518-504639)
chr1 (61-174)||(8838820-8838932)
chr1 (5-66)||(30104980-30105041)
chr1 (32-150)||(7836509-7836623)
[»] chr5 (48 HSPs)
chr5 (2-176)||(35701147-35701321)
chr5 (2-174)||(2351552-2351724)
chr5 (2-174)||(4818192-4818364)
chr5 (2-176)||(7523041-7523216)
chr5 (2-177)||(32528584-32528759)
chr5 (2-171)||(11963216-11963385)
chr5 (4-175)||(40182335-40182506)
chr5 (2-175)||(39918379-39918551)
chr5 (2-175)||(6284350-6284524)
chr5 (2-176)||(41790514-41790688)
chr5 (2-168)||(34794765-34794931)
chr5 (2-141)||(31770643-31770782)
chr5 (2-175)||(21739213-21739381)
chr5 (1-175)||(8136710-8136882)
chr5 (2-175)||(22493471-22493643)
chr5 (2-153)||(700653-700804)
chr5 (2-174)||(3735230-3735401)
chr5 (2-169)||(7770331-7770497)
chr5 (2-124)||(24181676-24181798)
chr5 (2-124)||(29241300-29241422)
chr5 (13-172)||(5673018-5673177)
chr5 (1-124)||(31880127-31880250)
chr5 (2-124)||(41459511-41459633)
chr5 (2-178)||(4689750-4689925)
chr5 (2-129)||(28090572-28090699)
chr5 (2-124)||(7208282-7208404)
chr5 (2-114)||(5571696-5571806)
chr5 (2-124)||(39788114-39788237)
chr5 (5-144)||(40489239-40489378)
chr5 (2-176)||(7725861-7726034)
chr5 (2-174)||(24036105-24036274)
chr5 (2-177)||(31644317-31644490)
chr5 (2-124)||(23091356-23091478)
chr5 (8-174)||(37148632-37148797)
chr5 (2-183)||(18470480-18470660)
chr5 (83-175)||(20119642-20119734)
chr5 (101-176)||(548218-548293)
chr5 (2-96)||(553346-553441)
chr5 (4-85)||(8561036-8561116)
chr5 (128-179)||(7208393-7208444)
chr5 (4-134)||(22432363-22432489)
chr5 (2-178)||(32093033-32093206)
chr5 (128-176)||(24181787-24181835)
chr5 (94-176)||(27839213-27839295)
chr5 (128-175)||(31880239-31880286)
chr5 (4-58)||(27839127-27839181)
chr5 (46-144)||(35954916-35955013)
chr5 (5-66)||(612520-612581)
[»] chr8 (49 HSPs)
chr8 (2-177)||(45446324-45446499)
chr8 (2-175)||(32303646-32303819)
chr8 (2-173)||(32020062-32020233)
chr8 (2-176)||(6386446-6386620)
chr8 (2-178)||(8673116-8673292)
chr8 (2-178)||(41709645-41709821)
chr8 (2-177)||(29563287-29563462)
chr8 (2-180)||(34101374-34101552)
chr8 (2-179)||(34062995-34063172)
chr8 (2-173)||(13406996-13407167)
chr8 (1-175)||(3251716-3251890)
chr8 (2-176)||(27103829-27104003)
chr8 (5-175)||(31731935-31732105)
chr8 (4-177)||(31513646-31513819)
chr8 (2-144)||(5968925-5969067)
chr8 (2-180)||(29672384-29672562)
chr8 (5-171)||(12753389-12753554)
chr8 (1-179)||(25478115-25478288)
chr8 (2-173)||(17805563-17805735)
chr8 (2-172)||(7394875-7395045)
chr8 (2-124)||(30543083-30543205)
chr8 (2-124)||(4052404-4052524)
chr8 (2-169)||(15001344-15001510)
chr8 (2-178)||(22999126-22999301)
chr8 (2-136)||(7591508-7591641)
chr8 (2-124)||(37664344-37664466)
chr8 (2-176)||(37618453-37618626)
chr8 (4-173)||(45113929-45114097)
chr8 (2-177)||(30501015-30501189)
chr8 (2-136)||(41548529-41548662)
chr8 (4-172)||(35225537-35225704)
chr8 (2-124)||(14005105-14005227)
chr8 (5-178)||(40388909-40389081)
chr8 (4-168)||(37474598-37474761)
chr8 (2-116)||(10466995-10467108)
chr8 (2-147)||(16595210-16595354)
chr8 (83-171)||(21272588-21272676)
chr8 (107-173)||(955102-955168)
chr8 (62-124)||(37861803-37861865)
chr8 (2-175)||(39642755-39642927)
chr8 (1-144)||(16485869-16486011)
chr8 (128-176)||(14005216-14005264)
chr8 (2-147)||(6460163-6460305)
chr8 (2-116)||(29611116-29611229)
chr8 (128-177)||(37861765-37861814)
chr8 (128-172)||(37664455-37664499)
chr8 (3-134)||(27109603-27109735)
chr8 (1-39)||(37861866-37861904)
chr8 (2-39)||(21272691-21272728)
[»] chr4 (76 HSPs)
chr4 (2-176)||(23521753-23521927)
chr4 (2-176)||(43640972-43641146)
chr4 (2-176)||(24002211-24002386)
chr4 (2-180)||(20802570-20802748)
chr4 (2-175)||(49152139-49152311)
chr4 (2-178)||(56154492-56154668)
chr4 (2-184)||(9512379-9512561)
chr4 (2-175)||(14296471-14296644)
chr4 (2-174)||(12600761-12600933)
chr4 (2-178)||(29785576-29785752)
chr4 (2-175)||(14314719-14314892)
chr4 (2-175)||(21579900-21580073)
chr4 (2-180)||(52319195-52319370)
chr4 (1-178)||(9807028-9807204)
chr4 (4-175)||(37865627-37865798)
chr4 (2-175)||(21202614-21202786)
chr4 (2-173)||(6776460-6776625)
chr4 (2-174)||(55065372-55065543)
chr4 (6-176)||(33177075-33177245)
chr4 (2-137)||(20518061-20518196)
chr4 (2-141)||(54542898-54543037)
chr4 (2-176)||(20694249-20694418)
chr4 (2-176)||(36743727-36743901)
chr4 (2-142)||(55593792-55593932)
chr4 (2-177)||(38486296-38486466)
chr4 (2-169)||(52949602-52949767)
chr4 (5-175)||(34929789-34929959)
chr4 (2-172)||(42869859-42870021)
chr4 (2-170)||(50178532-50178699)
chr4 (2-124)||(33552881-33553003)
chr4 (2-178)||(37695580-37695755)
chr4 (2-178)||(47642530-47642705)
chr4 (2-112)||(2725171-2725281)
chr4 (2-124)||(1231236-1231358)
chr4 (2-124)||(29616095-29616217)
chr4 (2-176)||(36885819-36885979)
chr4 (6-124)||(47361452-47361570)
chr4 (2-104)||(50727952-50728054)
chr4 (2-104)||(50735966-50736068)
chr4 (2-90)||(4325750-4325838)
chr4 (4-175)||(44649205-44649373)
chr4 (2-116)||(23327850-23327965)
chr4 (2-176)||(7554996-7555169)
chr4 (8-177)||(29592773-29592936)
chr4 (2-117)||(24210250-24210366)
chr4 (2-86)||(38812483-38812567)
chr4 (2-176)||(2786838-2787011)
chr4 (2-111)||(46680549-46680658)
chr4 (2-122)||(44324381-44324500)
chr4 (2-175)||(3649511-3649683)
chr4 (5-122)||(36497144-36497261)
chr4 (8-168)||(30942670-30942829)
chr4 (5-172)||(37931798-37931964)
chr4 (114-173)||(46680641-46680700)
chr4 (2-116)||(32181197-32181310)
chr4 (5-167)||(50186411-50186572)
chr4 (46-124)||(53343560-53343638)
chr4 (1-169)||(22318422-22318589)
chr4 (8-150)||(7001754-7001893)
chr4 (2-88)||(42772719-42772805)
chr4 (128-181)||(33552992-33553045)
chr4 (11-115)||(11055977-11056080)
chr4 (2-85)||(41711811-41711894)
chr4 (3-86)||(56487292-56487375)
chr4 (115-175)||(38520438-38520498)
chr4 (1-85)||(39078625-39078709)
chr4 (118-172)||(32181161-32181215)
chr4 (95-177)||(52949517-52949599)
chr4 (134-175)||(2725288-2725329)
chr4 (2-171)||(13110207-13110374)
chr4 (82-175)||(50729644-50729737)
chr4 (2-169)||(16320402-16320566)
chr4 (126-173)||(41711747-41711794)
chr4 (119-173)||(38812416-38812470)
chr4 (4-84)||(20644282-20644362)
chr4 (83-127)||(32081080-32081124)
[»] chr3 (49 HSPs)
chr3 (2-179)||(28675658-28675835)
chr3 (2-181)||(4851496-4851675)
chr3 (2-167)||(12349211-12349376)
chr3 (2-183)||(51259820-51260001)
chr3 (2-176)||(1344747-1344921)
chr3 (2-174)||(26282427-26282599)
chr3 (2-180)||(39052878-39053057)
chr3 (2-172)||(21221400-21221570)
chr3 (2-178)||(53557835-53558011)
chr3 (2-173)||(29584749-29584920)
chr3 (2-173)||(47958472-47958643)
chr3 (2-171)||(3864715-3864883)
chr3 (2-170)||(25927367-25927536)
chr3 (2-173)||(2134944-2135115)
chr3 (2-173)||(25860461-25860632)
chr3 (2-176)||(5442162-5442336)
chr3 (13-171)||(53046692-53046850)
chr3 (4-181)||(24571148-24571324)
chr3 (2-175)||(31883062-31883234)
chr3 (2-127)||(44116859-44116984)
chr3 (2-174)||(38213227-38213399)
chr3 (2-124)||(34026590-34026712)
chr3 (1-177)||(50386495-50386670)
chr3 (32-175)||(43175441-43175584)
chr3 (2-124)||(20609688-20609810)
chr3 (2-139)||(40094411-40094548)
chr3 (2-134)||(42636443-42636575)
chr3 (2-174)||(22484783-22484954)
chr3 (2-176)||(33364818-33364991)
chr3 (2-176)||(51925248-51925421)
chr3 (2-176)||(10747089-10747263)
chr3 (2-170)||(29645943-29646111)
chr3 (2-171)||(54622836-54623001)
chr3 (2-124)||(3695332-3695449)
chr3 (5-90)||(20255002-20255087)
chr3 (4-84)||(51296544-51296624)
chr3 (2-175)||(21373812-21373975)
chr3 (5-85)||(41694944-41695024)
chr3 (8-175)||(45690947-45691112)
chr3 (4-169)||(3964167-3964331)
chr3 (1-85)||(3867688-3867772)
chr3 (2-76)||(49748951-49749025)
chr3 (128-176)||(20254946-20254994)
chr3 (8-84)||(25395577-25395653)
chr3 (128-175)||(20609799-20609846)
chr3 (2-84)||(44000224-44000306)
chr3 (12-85)||(6179394-6179467)
chr3 (2-39)||(39215509-39215546)
chr3 (5-102)||(44267688-44267784)
[»] chr7 (56 HSPs)
chr7 (2-176)||(10932604-10932778)
chr7 (2-176)||(36769616-36769790)
chr7 (2-175)||(3922750-3922923)
chr7 (2-171)||(18470563-18470732)
chr7 (2-174)||(26994272-26994444)
chr7 (2-174)||(47947636-47947808)
chr7 (2-174)||(47953066-47953238)
chr7 (2-173)||(32873816-32873987)
chr7 (2-179)||(46633568-46633745)
chr7 (2-175)||(11321932-11322105)
chr7 (1-178)||(3892072-3892249)
chr7 (5-173)||(30849296-30849464)
chr7 (2-172)||(21784749-21784919)
chr7 (2-171)||(41211247-41211417)
chr7 (2-172)||(43158733-43158903)
chr7 (2-176)||(18386399-18386573)
chr7 (4-178)||(30599057-30599231)
chr7 (52-175)||(12982178-12982301)
chr7 (2-176)||(43189289-43189464)
chr7 (2-173)||(1870011-1870183)
chr7 (2-178)||(9913398-9913573)
chr7 (2-178)||(9927086-9927261)
chr7 (1-179)||(43368073-43368250)
chr7 (2-147)||(26371856-26372001)
chr7 (2-124)||(40753081-40753203)
chr7 (5-175)||(46408771-46408934)
chr7 (2-175)||(34295451-34295623)
chr7 (25-176)||(48894592-48894742)
chr7 (5-175)||(23349341-23349510)
chr7 (7-173)||(47316750-47316901)
chr7 (2-124)||(29661249-29661371)
chr7 (2-90)||(44748655-44748743)
chr7 (2-169)||(329352-329518)
chr7 (2-164)||(22724578-22724739)
chr7 (5-173)||(21133248-21133417)
chr7 (6-178)||(38301221-38301387)
chr7 (2-169)||(26652748-26652914)
chr7 (9-178)||(16962984-16963149)
chr7 (9-114)||(11250558-11250663)
chr7 (2-178)||(22724079-22724254)
chr7 (5-177)||(43213975-43214141)
chr7 (2-170)||(41665622-41665789)
chr7 (2-152)||(1363536-1363684)
chr7 (5-167)||(48445405-48445566)
chr7 (4-85)||(34117417-34117498)
chr7 (11-104)||(46627116-46627209)
chr7 (47-122)||(47442765-47442840)
chr7 (25-166)||(11822116-11822254)
chr7 (2-175)||(20127163-20127337)
chr7 (2-173)||(26910457-26910624)
chr7 (2-175)||(37966850-37967022)
chr7 (119-174)||(34117349-34117404)
chr7 (2-88)||(17237038-17237124)
chr7 (1-66)||(22631722-22631787)
chr7 (5-85)||(15035303-15035383)
chr7 (126-182)||(46448799-46448855)
[»] scaffold0014 (1 HSPs)
scaffold0014 (2-178)||(101817-101993)
[»] scaffold0054 (1 HSPs)
scaffold0054 (2-175)||(23448-23619)
[»] chr6 (42 HSPs)
chr6 (2-175)||(24242535-24242708)
chr6 (2-169)||(17867712-17867879)
chr6 (2-169)||(17877495-17877662)
chr6 (2-180)||(2614762-2614940)
chr6 (2-173)||(24203236-24203406)
chr6 (2-172)||(11212131-11212301)
chr6 (2-164)||(10324196-10324358)
chr6 (2-178)||(3259546-3259727)
chr6 (25-180)||(29814731-29814886)
chr6 (2-176)||(15277022-15277196)
chr6 (2-174)||(3932892-3933064)
chr6 (6-175)||(32409941-32410110)
chr6 (25-180)||(28502325-28502481)
chr6 (2-134)||(32132465-32132597)
chr6 (2-174)||(17443135-17443306)
chr6 (2-175)||(10959872-10960044)
chr6 (2-147)||(15277365-15277510)
chr6 (2-178)||(11613876-11614037)
chr6 (2-124)||(34176752-34176874)
chr6 (2-170)||(18057396-18057563)
chr6 (76-179)||(32805345-32805448)
chr6 (2-175)||(10485030-10485201)
chr6 (2-124)||(167008-167130)
chr6 (60-171)||(4494241-4494352)
chr6 (41-172)||(14808124-14808254)
chr6 (5-175)||(14925544-14925713)
chr6 (10-175)||(31870193-31870357)
chr6 (2-176)||(34684068-34684244)
chr6 (2-173)||(23636097-23636267)
chr6 (101-175)||(11381964-11382038)
chr6 (2-173)||(11279012-11279172)
chr6 (2-178)||(32859920-32860095)
chr6 (2-166)||(29054239-29054400)
chr6 (2-69)||(11382041-11382108)
chr6 (2-176)||(8177966-8178141)
chr6 (2-83)||(3290635-3290716)
chr6 (41-162)||(11675498-11675619)
chr6 (5-175)||(3379583-3379751)
chr6 (128-176)||(167119-167167)
chr6 (2-57)||(9902743-9902798)
chr6 (1-84)||(29424651-29424734)
chr6 (46-168)||(18597287-18597408)
[»] scaffold0169 (2 HSPs)
scaffold0169 (2-174)||(12588-12760)
scaffold0169 (2-174)||(18106-18278)
[»] scaffold0208 (1 HSPs)
scaffold0208 (2-176)||(2390-2564)
[»] scaffold0098 (1 HSPs)
scaffold0098 (2-174)||(51311-51483)
[»] scaffold0729 (1 HSPs)
scaffold0729 (2-173)||(4631-4796)
[»] scaffold0957 (1 HSPs)
scaffold0957 (2-147)||(2547-2692)
[»] scaffold0025 (1 HSPs)
scaffold0025 (5-174)||(5495-5663)
[»] scaffold0181 (1 HSPs)
scaffold0181 (2-122)||(19142-19262)
[»] scaffold0027 (1 HSPs)
scaffold0027 (2-171)||(15047-15216)
[»] scaffold0004 (2 HSPs)
scaffold0004 (2-89)||(373016-373103)
scaffold0004 (124-172)||(373123-373171)
[»] scaffold0360 (2 HSPs)
scaffold0360 (4-124)||(15435-15551)
scaffold0360 (128-175)||(15540-15587)
[»] scaffold0280 (1 HSPs)
scaffold0280 (5-176)||(13742-13912)
[»] scaffold0650 (1 HSPs)
scaffold0650 (2-176)||(1695-1868)
[»] scaffold0050 (1 HSPs)
scaffold0050 (2-176)||(43002-43174)
[»] scaffold0003 (1 HSPs)
scaffold0003 (131-177)||(338756-338802)
[»] scaffold0062 (1 HSPs)
scaffold0062 (5-114)||(3683-3791)


Alignment Details
Target: chr2 (Bit Score: 194; Significance: 1e-105; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 36417738 - 36417959
Alignment:
Q  175 ctaagagttacttgggcccttttttcataagtgggtcaaacccaggcccatacaattcgaaacactacaaaatccgaaaccctatattttgtaactgagt 274  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36417738 ctaagagttacttgggcccttggttcataagtgggtcaaacctaggcccatacaattcgaaacactacaaaatccgaaaccctatattttgtaactgagt 36417837  T
Q  275 tattgagaacaaaccttctttcttccacatcttcgctgcggctagcgcctcatcaactccaaaaccctaatggtaaccaccatcttcaaatcccttagat 374  Q
    ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  36417838 tattgagaacaaaccttctttcttccacatcttcgctgcggctggtacctcatcaactccaaaaccctaatggtaacaaccatcttcaaatcccttagat 36417937  T
Q  375 ccccaatttccatcatcgaatt 396  Q
    ||||||||||||||||||||||    
T  36417938 ccccaatttccatcatcgaatt 36417959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 35114829 - 35114656
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| |||||||  |    
T  35114829 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgccgt 35114730  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  35114729 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 35114656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 18685880 - 18685706
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  18685880 acgtacaagttgtctaaaatattaaaataacattttgtccctcaaaaatcctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 18685781  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  18685780 tctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 18685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 30326377 - 30326550
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||||| || | |||||||||||| ||||||||||||||||| ||||||||| |||| |||||||| |    
T  30326377 acgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaattccataaaaattttgtcctgtgctgt 30326476  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30326477 tctgccttgtgttgtacggttctatcttgtactgttctgtccagtacttgctcttttgcaaaccaaacacaccc 30326550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 34338850 - 34338681
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||| |||| |||||||| ||||     
T  34338850 acaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctg 34338751  T
Q  106 ccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  34338750 ccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 34338681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 32497959 - 32497784
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  32497959 acgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 32497860  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||| |||| |||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||||||    
T  32497859 tctgccttttgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacacccta 32497784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 5278880 - 5279054
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  5278880 acgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 5278979  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||| |||||||||||||||||||||||| |||| || || ||||||||||||||||||||||    
T  5278980 tctgccttgtgttgtattgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacaccct 5279054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 33366651 - 33366481
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||    
T  33366651 tacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttct 33366552  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
      |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  33366551 gacttgtgttgtactgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacaccc 33366481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 2086116 - 2085946
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||| |||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| | |||| | |    
T  2086116 acgtacaagttgtctgaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatggcataaaaaatttgtcatgtgttgt 2086017  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2086016 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacaca 2085946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 16104318 - 16104144
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  16104318 acgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccctgtgttgt 16104219  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||| |||||||    
T  16104218 tctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgttgttttgcaaaccaaatacaccct 16104144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 2645135 - 2645306
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||| || ||||| ||||    
T  2645135 tacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttct 2645234  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     |||| ||||||||||||||||||| ||||||||| || |||| ||| | ||||||||||||||||||||||    
T  2645235 gccttatgttgtactgttctatcttatactgttctatcaagtacttgttgttttgcaaaccaaacacaccct 2645306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 17540759 - 17540588
Alignment:
Q  2 acgtacaagttgtctaaaatac-aaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||||  ||||||| || | |||||||||||| ||||||||||||||||||||||||||||| || | ||||||     
T  17540759 acgtacaagttgtctaaaataccaaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatatgtcatgtgctg 17540660  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||||||    
T  17540659 ttctgccttgtgttgtactgttctatcttatactgttctatccagtacttgctgttttgcaaaccaaacaca 17540588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 39461358 - 39461187
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||| |||||||||||| |||||| |||||||| || | |||||||||||| | |||||||||||||||||||||||||||||| | |||||| |    
T  39461358 acgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgctgt 39461259  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| ||||||||||||||||||||||||||| |||| ||||||||| || || |||||||||||||||||||    
T  39461258 tctgccttgtgttgtactgttctatcttgtattgttatgtccagtacttactgttttgcaaaccaaacacac 39461187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 9732976 - 9733138
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||  |    
T  9732976 acgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgccgt 9733075  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaac 164  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||    
T  9733076 tctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaac 9733138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 37003914 - 37004091
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacct-gtgcta 100  Q
    |||||||| ||||||||||||| |||||| |||||||| || | |||||||||||| | ||||||||| |||||||||||||||||||| ||| |||||     
T  37003914 acgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaataaaaaattattcaatgccataaaaaatttgtccttgtgctg 37004013  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    || |||||||| ||||||||||||||||| |||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  37004014 ttttaccttgtattgtactgttctatcttatactgttctgtctagtacttgctgttttgcaaaccaaacacaccctaa 37004091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 4641557 - 4641387
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| |||||||| |||||| ||||||||||| | |||||||||||| ||||||||||||||||||  |||||||||||| |||||| | ||||    
T  4641557 tacaagttgtttaaaataccaaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaatggtataaaaaatttgtcctgtgttgttct 4641458  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
     |||| |||||||||||||||| || ||||||||||||||||| ||||| ||||||||| |||||||||||    
T  4641457 gccttatgttgtactgttctatattttactgttctgtccagtacttgctgttttgcaaagcaaacacaccc 4641387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 7258941 - 7258784
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttccc-ctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| ||||||  |||| | ||||| |||||| |||||||||||||||||||||||||||||||| | ||| |||    
T  7258941 acgtacaagttgtctaaaataccaaaataacatttttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtacta 7258842  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctctttt 158  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  7258841 ttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttggtctttt 7258784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 37308699 - 37308527
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| ||||||  ||||||| ||   ||||||||| || | |||||||||||||||||||||||||||||| | |||| | |    
T  37308699 acgtacaaattgtctaaaataccaaaatagtattttgtccctaaaaaatcgtaaaaca-aaaaaattactcaatgccataaaaaatttgtcatgtgttgt 37308601  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  37308600 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccc 37308527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 42706400 - 42706231
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa-ttactcaatgccataaaaaatttgacctgtgctattc 103  Q
    ||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||| |||||||||||||||||||||||| |||||||| |||    
T  42706400 tacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcctgtgctgttc 42706301  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |  ||||||||||| ||||||||||||||||||| |||| |||  || || |||||||||||||||||||    
T  42706300 tgtcttgtgttgtattgttctatcttgtactgttatgtcaagtgcttactgttttgcaaaccaaacacac 42706231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 44284673 - 44284508
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  44284673 acgtacaagttgtctaaaataacaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 44284574  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||        ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  44284573 tctgccttg--------tgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 44284508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 18793307 - 18793478
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| | || ||||| |||||| ||||||||||||||||| |||||||||||||| | |||| | |    
T  18793307 acgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaattgtataaaacaaaaaattactcaatcccataaaaaatttgtcttgtgatgt 18793406  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||||||| |||||||||||||||| || ||||||| ||||||||| ||  | |||||||||||||||||||    
T  18793407 tctaccttatgttgtactgttctattttatactgttttgtccagtacttattattttgcaaaccaaacacac 18793478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 19513735 - 19513906
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| ||||||||||||||||| |||||||||||||| || ||||| |    
T  19513735 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcccgtgctgt 19513834  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||  ||| | ||||||||||||||||||||||||| | ||||||| || || |||||||||||||||||||    
T  19513835 tctgtcttctattgtactgttctatcttgtactgttttatccagtacttactgttttgcaaaccaaacacac 19513906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 25 - 175
Target Start/End: Complemental strand, 40692326 - 40692176
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| || | |||||||||||||||||||    
T  40692326 aaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttct 40692227  T
Q  125 atcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||||||||||||| |||| ||||||| || ||||||||| |||||||||||    
T  40692226 atcttgtactgttatgtctagtatttactgttttgcaaatcaaacacaccc 40692176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 30798535 - 30798703
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||| ||| ||||| |||||||| | |||||| |    
T  30798535 acgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactaaataccatacaaaatttgtcatgtgctgt 30798634  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||  ||| |||  |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  30798635 tctgtcttatgt--tactgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacaca 30798703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 3913506 - 3913681
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||| |||||| |||| |||||||||| ||||||||  ||| || | |    
T  3913506 acgtacaagttgtctaaaataccaaaatagcattttgctccccaaaaatcgtataaaacaaaatattattcaatgccat-aaaaatttatcctatgttgt 3913604  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||||||||  |||||| |||| ||||||||| || ||||||| || ||||||||| ||||||||||||||    
T  3913605 tctgccttgtgttgtgttgttctgtcttatactgttctatcaagtatttactgttttgcaaatcaaacacaccctaa 3913681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 26418967 - 26418793
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||| | |||| ||||| |||||| ||||||||||||||| ||||||||||  |||| | |||| | |    
T  26418967 acgtacaagttgtctaaaataccaaaataacattttatcccccaaaaattgtataaaacaaaaaattactcattgccataaaatttttgtcatgtgttgt 26418868  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||| ||||| ||||||| ||||| ||||||||||| | || || || ||||||||||||||||||||||    
T  26418867 tctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttactgttttgcaaaccaaacacaccct 26418793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 42365617 - 42365454
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||| |||||| |||||||| |||  |||||| ||||| |||||||||||||||||||||||||||||||  | |||| | ||||     
T  42365617 acaagttgtctaaaataccaaaataacattttgtcccctaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttatcttgtgttgttctg 42365518  T
Q  106 ccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    |||||||||||||||||||||||| |  |||| | |||| || || || |||||||||||||||    
T  42365517 ccttgtgttgtactgttctatcttatgttgttttttccaatacttactgttttgcaaaccaaac 42365454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 33889287 - 33889165
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| ||||||||||||||||| ||||||||||||||   |||||| |    
T  33889287 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgttatgtgctgt 33889188  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  33889187 tctgccttgtgttgtactgttct 33889165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 38993117 - 38993284
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||| |||||  ||||||||| ||||||| ||||| ||||    |||||| | |||| | |    
T  38993117 acgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaataatataatacagaaaattattcaataccat----aatttgtcttgtgttgt 38993212  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||| |||||| |||| ||||||| || |||||||||||||| || || |||||||||||||||||||    
T  38993213 tctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttactattttgcaaaccaaacacac 38993284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 9717268 - 9717108
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||||| || | |||||||||| | |||||||||||| |||||||||||||| |||  |             
T  9717268 acgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtatcaaacaaaaaattacccaatgccataaaaattttatc--------- 9717178  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
            |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||    
T  9717177 --------gtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccataag 9717108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 7761619 - 7761705
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatt 88  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| |||||||||||    
T  7761619 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatt 7761705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 16177929 - 16178101
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||   |||| || |||| |||||||||||| ||||||  ||| ||||||| ||||||| |||| | |||| | |    
T  16177929 acgtacaagttgtctaaaataccaaaatggaatttcgtcccccaaaaatcgtataaaacaaaa--ttattcaatgctataaaaa-tttgtcgtgtgttgt 16178025  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||| ||||||||||  || | | ||||| |||||||||||||||| || || ||||||||||||| |||||||||    
T  16178026 tctatcttgtgttgtgttgatatgtcttgcactgttctgtccagtacttactgttttgcaaaccaatcacacccta 16178101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 13829480 - 13829310
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    ||||||||| ||||||| || |||||||||||| || || | |||||| ||||| ||||||||||| |||||  |||||||| ||||  ||||| | |||    
T  13829480 gtacaagttatctaaaacaccaaaatatcatttcgtccctcaaaaatcatataaaacaaaaaattattcaatatcataaaaa-tttgttctgtgatgttc 13829382  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | ||||||||||| |||||||   |||||||||| |||||| || || || ||||||||||||||| |||||    
T  13829381 tgccttgtgttgtgctgttctgctttgtactgttttgtccaataattactgttttgcaaaccaaacgcaccc 13829310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 46 - 147
Target Start/End: Original strand, 26981779 - 26981881
Alignment:
Q  46 aaaatcgtataatacaaaaaattactcaatgccataaaaaatttga-cctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtcca 144  Q
    |||||||||||| ||||||||||||||| || ||||||||| || | |||||||| |||| ||||||||||| ||||| | |||||||||||||||||||    
T  26981779 aaaatcgtataaaacaaaaaattactcattgtcataaaaaaatttatcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtcca 26981878  T
Q  145 gta 147  Q
    |||    
T  26981879 gta 26981881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 30712900 - 30712726
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||| || ||||||||||||  | |||| |||||| ||||| ||||||||||| ||||| ||||||||| |||| ||| |||| |    
T  30712900 acgtagaagttgtctaaaacaccaaaatatcatttcat-ccccaaaaatcatataaaacaaaaaattattcaataccataaaaa-tttgtcctttgctgt 30712803  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    | | |  ||||||||  ||||||   |||||||||||||||||||| || || |||| ||||||||||||| |||||    
T  30712802 tatgcgctgtgttgtgttgttctgcattgtactgttctgtccagtacttacttttttacaaaccaaacacatcctaa 30712726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 32766550 - 32766681
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||| |||||||||||||| |||||| ||||| || | || |||||||||||| ||||||||||| |||||||||| ||||||||| |||||| |     
T  32766550 tacgtacaggttgtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcctgtgttg 32766648  T
Q  101 ttctaccttgtgttgtactgttctatcttgtac 133  Q
    |||| |||||  ||||  |||||| ||||||||    
T  32766649 ttctcccttgcattgtgttgttctttcttgtac 32766681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 40832515 - 40832692
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaa--attactcaatgccataaaaaatttgacctgtgct 99  Q
    |||||||||| ||||||||||| ||||||  |||| || |||| |||||||||||| |||||||  || | |||||   ||||||| |||| | |||| |    
T  40832515 acgtacaagtagtctaaaataccaaaatagtatttcgtcccccaaaaatcgtataaaacaaaaataataattcaataatataaaaa-tttgtcatgtgtt 40832613  T
Q  100 attctaccttgtgttgtactgttctatcttgtactgttctgtccagtatt---tgctcttttgcaaaccaaacacaccc 175  Q
     |||||||||||||||| ||||||||||||||||| ||||||| | || |   | || |||||||||||||||||||||    
T  40832614 gttctaccttgtgttgtgctgttctatcttgtactattctgtctaatacttactactgttttgcaaaccaaacacaccc 40832692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 12672522 - 12672594
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatg 76  Q
    |||||||||||||||||||| |||||| |||||||| | || |||||||||||| ||||||||||||||||||    
T  12672522 gtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattactcaatg 12672594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 11 - 171
Target Start/End: Original strand, 27462856 - 27463014
Alignment:
Q  11 ttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttg 110  Q
    ||||| ||||||| |||||| ||||| || |||  ||||||||| || ||||||||||| |||||| |||| ||| |||| | |||| | ||||||||||    
T  27462856 ttgtcaaaaataccaaaatagcatttcgtgccctaaaaatcgtaaaa-acaaaaaattattcaatgtcatataaa-tttgtcatgtgttgttctaccttg 27462953  T
Q  111 tgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    |||||| ||||||| | ||| |||||| | |||| || ||||| |||||||||||||||||    
T  27462954 tgttgtgctgttctgttttgcactgttttatccaatacttgctgttttgcaaaccaaacac 27463014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 28824603 - 28824773
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||| ||||||||||||||||| |||||| ||||| |  |||| ||||| |||||| ||||||| ||| || ||| ||| ||||||||| | |||  | |    
T  28824603 acgtgcaagttgtctaaaatactaaaatagcatttcgcaccccaaaaattgtataaaacaaaaatttattccatgtcat-aaaaatttgtcatgtattgt 28824701  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  ||| |||||| ||||||| ||||||||||||| |||||||| || || |||||| |||||||||||||    
T  28824702 tctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttactgttttgc-aaccaaacacacc 28824773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 20907631 - 20907468
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||| |||| |||||||| |||||| |||||| | |||| ||||||||| || ||||||||||| |||||| ||| ||||||||| | | || | |||    
T  20907631 gtacaaattgtataaaatactaaaataacattttatcccccaaaaatcgtacaaaacaaaaaattattcaatgacat-aaaaatttgtcatatgttgttc 20907533  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | ||||||||     |||||| |||||||||||||| | | |||  |||| |||||||||||||||||||    
T  20907532 tcccttgtgt-----tgttctttcttgtactgttctatacggtacctgctattttgcaaaccaaacacac 20907468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 10399922 - 10400087
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||||  | |||||| |||||||| |||| ||| |||||||| ||||||||||| |||||||||| ||||||||  | ||||     || ||    
T  10399922 aagttgtctaaaaatccaaaatagcattttgtcccccaaaagtcgtataaaacaaaaaattattcaatgccat-aaaaatttatcatgtg-----ctgcc 10400015  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    || ||||||  |||| | ||||||||| || ||| ||||| |  || |||||||||||||||||||||||||    
T  10400016 ttatgttgtgatgttttgtcttgtactattgtgttcagtactcactgttttgcaaaccaaacacaccctaag 10400087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 142
Target Start/End: Complemental strand, 1247176 - 1247060
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| ||||| ||||||| |||||||||||| | ||||||||| ||||||||||| |||||||| | ||| || | || | |||||||||  ||||||    
T  1247176 aaaatagcatttcgttccccaaaaatcgtataaaataaaaaattattcaatgccata-aaaatttgtcttgtactgtactgctttgtgttgtgttgttct 1247078  T
Q  125 atcttgtactgttctgtc 142  Q
     |||||||||||| ||||    
T  1247077 gtcttgtactgttatgtc 1247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 169
Target Start/End: Complemental strand, 8112328 - 8112183
Alignment:
Q  17 aaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttg 115  Q
    ||||||| |||||| |||||| ||||| ||||| |||||||| |||||||||||||||||| |||| |||||||| | |||| |        ||||||||    
T  8112328 aaaataccaaaataacatttttttcccttaaaaatcgtataaaacaaaaaattactcaatgtcatacaaaatttgtcatgtgat--------ttgtgttg 8112237  T
Q  116 tactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    || ||||||||||| || ||||| ||| |||| || || ||||||||| |||||    
T  8112236 tattgttctatcttatattgttccgtcgagtacttactgttttgcaaatcaaac 8112183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 6896212 - 6896039
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| ||||| || |||| |||  | ||||| |||| |||||| ||||| |||| ||||||||| | |||| | |    
T  6896212 acgtacaagttgtctaaaacaccaaaatagcatttcgtcccccaaaaggcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtgttgt 6896114  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    | | |||||||||||  ||||||   || |||||||||||  |||| || || ||||||||||||||| |||||||    
T  6896113 tatgccttgtgttgtgttgttctgcattatactgttctgt-tagtacttactgttttgcaaaccaaacgcacccta 6896039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 101 - 176
Target Start/End: Original strand, 12672598 - 12672672
Alignment:
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| |||||||||||||||||||||||| || | || |||| ||||||| || ||||||||||||||||||||||    
T  12672598 ttctgccttgtgttgtactgttctatcttatatt-ttatgtctagtatttactgttttgcaaaccaaacacaccct 12672672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 41934626 - 41934492
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||| |||||||||||||||| |||||| |||||||| | || |||||| ||||| ||| ||||| | ||||| || | |||||||||   || | ||    
T  41934626 tacgtataagttgtctaaaataccaaaataacattttgtccaccaaaaatcatataagacataaaatcattcaataccgt-aaaaatttgttatgcgtta 41934528  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgt 136  Q
    || || ||||||||||  ||||||||||||||||||    
T  41934527 ttttatcttgtgttgtgttgttctatcttgtactgt 41934492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 12939346 - 12939410
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa 66  Q
    ||||||||||||||||| |||| |||||| |||||||| |||| |||||| ||||| ||||||||    
T  12939346 acgtacaagttgtctaagataccaaaataacattttgtcccccaaaaatcatataaaacaaaaaa 12939410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 11114912 - 11114833
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaa-aatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||||||||| | ||||||  |||| || || |||| |||||||||| || |||||||| |||||||||||||||    
T  11114912 acaagttgtctaaaattccaaaatagtatttcgt-ccgctaacaatcgtataaaacgaaaaattattcaatgccataaaaa 11114833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25383176 - 25383092
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||| ||||||||||||||| |||   |||||| | |  |||||||||||| |||| |||||| ||||| || ||||||    
T  25383176 tacgtacaagatgtctaaaatacaaatataagcttttgtccacaaaaaatcgtataagacaacaaattattcaataccgtaaaaa 25383092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 45463155 - 45463238
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||||||  ||||||||||||  |||||| ||||| || ||||  ||||||||||| ||||||||||| | ||||| |||||||    
T  45463155 tacgtacagattgtctaaaatatcaaaataacatttcgt-ccccagaaatcgtataaaacaaaaaattatttaatgcaataaaaa 45463238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 8e-68; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 844845 - 845019
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  844845 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 844944  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  844945 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 845019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 16386907 - 16386734
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  16386907 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 16386808  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  16386807 tctgccttgtattgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacacaccc 16386734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 42510578 - 42510404
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  42510578 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgt 42510479  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||| ||||||||||||    
T  42510478 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccct 42510404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 41972964 - 41972792
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||| |||||||||||||||||| | |||||| |    
T  41972964 acgtacaagttgtctaaaataccaaaataacattttgtccctc-aaaatcgtataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctgt 41972866  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  41972865 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 41972792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 16451177 - 16451009
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  16451177 tacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattct 16451078  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
     || ||||||||||| ||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  16451077 gccatgtgttgtactattctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacac 16451009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 6711167 - 6711345
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  6711167 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgt 6711266  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgc-aaaccaaacacaccctaag 179  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| ||| | |||||| |||||||||||||||||||    
T  6711267 tctgccttgtgttgtactgttctattttgtactgttctgtccagtacttgatgttttgcaaaaccaaacacaccctaag 6711345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 35387432 - 35387609
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||| | || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  35387432 acgtacaagttgtctaaaataccaaaatagcattttatccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 35387531  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    ||||||||||||||||||||||||||||||| | || ||||||||| ||||| |||||||||||||||| ||||||||    
T  35387532 tctaccttgtgttgtactgttctatcttgtattattatgtccagtacttgctgttttgcaaaccaaacagaccctaag 35387609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 24339760 - 24339929
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||  || |||| || ||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  24339760 acgtacaagttgtctaaaataccaaaatagcatt--gtcccccaaacatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgt 24339857  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  24339858 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctgttttgcagaccaaacacac 24339929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 12890291 - 12890120
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||| |||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||  |||||||| |    
T  12890291 acgtacaagttgtctaagataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttatcctgtgctgt 12890192  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||    
T  12890191 tctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttactattttgcaaaccaaacacac 12890120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 51264548 - 51264377
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| |||||||| |||||| |||||||| |    |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  51264548 acgtacaagttgtttaaaatactaaaatagcattttgtcctttaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctat 51264449  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||  |||||||||||||||||||||||||||||||||||||| || |||||  ||||||||||||||||||    
T  51264448 tctgtcttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgatttgcaaaccaaacacac 51264377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 28340424 - 28340597
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||| ||| | ||| || |    
T  28340424 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcatgtactgt 28340523  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || || || ||||| |||||||||||||||    
T  28340524 tctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgtaaaccaaacacaccc 28340597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 50540397 - 50540221
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||| ||||| |||| ||||||||||||||||||||||||||| |||||||| |    
T  50540397 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcatataaaacaacaaattactcaatgccataaaaaatttgccctgtgctgt 50540298  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    |||  | ||||||||||||||||||||| |||||||||||| |||| || || ||||||||||||||||||| ||||    
T  50540297 tctgacgtgtgttgtactgttctatcttatactgttctgtcaagtacttactgttttgcaaaccaaacacactctaa 50540221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 7183972 - 7183797
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| || |||  |||||||  | | |||||||||||| |||||||||||||||||||||||||||||||| |||||  |     
T  7183972 tacgtacaagttgtctaaaataccaatatagtattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtattg 7183873  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  7183872 ttctgtcttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccct 7183797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 45490996 - 45491167
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||| |||||||| | |||||| |    
T  45490996 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatacaaaatttgtcatgtgctgt 45491095  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||| ||||||||||| || |||||||||||||| ||||| ||||||| |||||||||||    
T  45491096 tctgccttgtgttgtattgttctatcttatattgttctgtccagtaattgctgttttgcataccaaacacac 45491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 183
Target Start/End: Complemental strand, 17888001 - 17887819
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||| |||||||| |||| ||||||||||||||||||||||||||| | |||| |     
T  17888001 acgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttg 17887902  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagtt 183  Q
    |||| |||||||||||| |||||||||||||||| |||||||| ||| || || |||||||||||||||||||| ||||||||    
T  17887901 ttctgccttgtgttgtattgttctatcttgtactattctgtcccgtacttactgttttgcaaaccaaacacaccataagagtt 17887819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 1351556 - 1351728
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||  | | |||||| ||||| ||||||||| |||||||||||||||||||||| | |||| | |    
T  1351556 acgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcatataaaacaaaaaat-actcaatgccataaaaaatttgtcatgtgttgt 1351654  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||||    
T  1351655 tctgccttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacaccc 1351728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 44738163 - 44738343
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  ||||||   |||| |||| | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  44738163 acgtacaagttgtctaaaatagcaaaatagt-ttttattcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgt 44738261  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagtt 183  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||| ||||| |||||||||||||||||| ||| ||||||    
T  44738262 tctaccttgtgttgtattgttctatcttctactgttctgtctagtacttgctgttttgcaaaccaaacacatccttagagtt 44738343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 32270404 - 32270240
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||  |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| |||     ||||    
T  32270404 gtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcct-----attc 32270310  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |  ||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  32270309 tgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacac 32270240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 51703287 - 51703455
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||| ||||||||||||||||||||| |||||||| || | ||||| |||||| |||||||||||||||||||||||||||||||| | |||  | || |    
T  51703287 tacatgttgtctaaaatacaaaaataacattttgtccctc-aaaatggtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgtttt 51703385  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
     ||||||||||| ||||| |||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  51703386 gccttgtgttgttctgttatatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacacc 51703455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 25539905 - 25539733
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| | |||||| |||||| ||||| || |||| |||||||||||| ||||||||||| |||| |||||||||| |||| |||||||||||||    
T  25539905 tacaagttgttttaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaaagccataaaaa-tttgtcctgtgctattct 25539807  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
     |||||||||||| |||| | |||||||||||| ||||||||| || |  ||||||||||||||| ||||||||    
T  25539806 gccttgtgttgtattgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccctaa 25539733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 4 - 172
Target Start/End: Original strand, 17327772 - 17327940
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||| || |||||||||| ||||||  ||||||| |||| |||||||||||| |||| ||||||||||| ||||||||||||||| ||| || | |||    
T  17327772 gtacaaattatctaaaataccaaaataatattttgtcccccaaaaatcgtataaaacaacaaattactcaacgccataaaaaatttgtcctatgttgttc 17327871  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    | |||||| ||||||||||||||||| |||||||||||||| || || || ||||||||| ||||||||    
T  17327872 tgccttgtattgtactgttctatcttatactgttctgtccaatacttacttttttgcaaatcaaacaca 17327940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 31004185 - 31004019
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  |||| || |||| |||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| | |    
T  31004185 acgtacaagttgtctaaaataccaaaatagtatttcgtcccccaaaaatcctataaaacaaaaaattattcaatgccata-aaaatttgtcctgtgatgt 31004087  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| |||||| |||  ||||||| |||||||||||||||| ||||| ||||| |||||||||||||||    
T  31004086 tctcccttgtattgcgctgttctttcttgtactgttctgtacagtacttgctgttttgcaaaccaaac 31004019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 175
Target Start/End: Complemental strand, 50304698 - 50304532
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||||||  |||||| |||||||| | || |||||||||||| ||||||||||| |||||| |||||||| |||| |||||||| |||| ||    
T  50304698 aagttgtctaaaatatcaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa-tttgtcctgtgctgttctccc 50304600  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||| |||| ||||||| |||||||||||||||| | ||| ||||| ||||||||||||||| |||||    
T  50304599 ttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaacgcaccc 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 26118336 - 26118458
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  26118336 acgtaaaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgt 26118435  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  26118436 tctgccttgtgttgtactgttct 26118458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 41967970 - 41968142
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| | ||||||  ||| ||||| |||||| ||||||||||||||| || ||||||||||||| | |||  | |    
T  41967970 acgtacaagttgtctaaaataccaaaatagccttttgtctcccaaaaattgtataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgt 41968069  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||  |||||||||||  |||||| |||||||||||||||||||| | || || ||||||||||||||||||||    
T  41968070 tccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttactgttttgcaaaccaaacacacc 41968142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 30105801 - 30105923
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||| |||||||||||||||||| || ||| | |    
T  30105801 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattacttaatgccataaaaaatttgtccagtgttgt 30105900  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  30105901 tctgccttgtgttgtactgttct 30105923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 46154950 - 46154780
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| |  | |||||| ||||| ||||||||||| |||||| ||||||||||||| | |||||  || |    
T  46154950 tacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcttataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgccgttat 46154851  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
      |||||||| |||||||||||||| ||||||| ||||||||| || || |||||||||| ||||||||||    
T  46154850 gtcttgtgttatactgttctatcttatactgttttgtccagtacttactgttttgcaaactaaacacaccc 46154780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 20495012 - 20495137
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||||||||||||||||| ||||||||||||| | |||||| |    
T  20495012 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgt 20495111  T
Q  102 tctaccttgtgttgtactgttctatc 127  Q
    ||| |||| |||||||||||||||||    
T  20495112 tctgccttatgttgtactgttctatc 20495137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 4 - 171
Target Start/End: Original strand, 38087119 - 38087285
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||  | |||||| ||||| ||||||| ||||| | ||||  ||||| |||| ||||||||||||||| |||| |||||||| |||    
T  38087119 gtacaagttgtctaaaaatccaaaatagcatttcgttccccaaaaattgcataaagcaaaatattattcaatgccataaaaa-tttgtcctgtgctgttc 38087217  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    | |||| |||||||||||||| |||||||||||| ||||||||| ||  | |||||||||||||||||    
T  38087218 tgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgcaaaccaaacac 38087285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 174
Target Start/End: Complemental strand, 1601223 - 1601049
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| | || ||||||||| || ||||||||||||||| |||||||||||||||| | |||| | ||||    
T  1601223 tacaagttgtctaaaataccaaaatagcattttgtccaccaaaaatcgtacaaaacaaaaaattactcattgccataaaaaatttgtcttgtgttgttct 1601124  T
Q  105 accttgtg-----ttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
     |||||||     ||||  |||||| |||||||||||| ||||||||| || || ||||||| ||||||||||||    
T  1601123 gccttgtgttgtgttgtgttgttctttcttgtactgttttgtccagtacttactgttttgcagaccaaacacacc 1601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 3414974 - 3415146
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaa-aattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||| |||||| |||||||| |||||| |||||||| |||| |||||| ||||| |||||| ||||||||||||||||||||||  | || |||| |     
T  3414974 acgtactagttgtttaaaataccaaaatagcattttgtcccccaaaaatcatataaaacaaaaaaattactcaatgccataaaaaaaattacatgtgttg 3415073  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    || |  |||||||| || ||||||||||||||||||| ||||||||| || || |||| ||||||||||||||    
T  3415074 ttttgtcttgtgttatattgttctatcttgtactgttttgtccagtacttactgttttacaaaccaaacacac 3415146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 38663185 - 38663014
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||| | |    
T  38663185 acgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgttgt 38663087  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||| | ||||  |||||| |||||||||||| ||| | ||| ||||| ||||||||||||||| ||||    
T  38663086 tctcccttatattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcacc 38663014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 42512890 - 42513060
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||| ||||||||||||  ||||||  ||||||| |||| |||||||||||| ||||||||||| ||||||  || ||||||||| ||||||||     
T  42512890 tacgtacaaattgtctaaaatatcaaaatagaattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtgat-aaaaatttgtcctgtgctg 42512988  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||| |||||| |||| ||||||| |||||||||||||||| | ||| |||   ||||||||||||||| |||||    
T  42512989 ttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttg---ttttgcaaaccaaacgcaccc 42513060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 16476276 - 16476454
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| ||||| |||||| ||| ||||||| |||||||||| | ||||||| | |||| | |    
T  16476276 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaattgtataaaacataaaattattcaatgccat-acaaatttgtcatgtggtgt 16476374  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagag 181  Q
    | | |||| ||| ||  ||||||||||| || |||| ||||||||| || || |||||||||||||||||||||| ||||    
T  16476375 tatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttactgttttgcaaaccaaacacacccttagag 16476454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 39281948 - 39281774
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| |||||| ||||| || | || |||||||||||| ||| ||||||| |||||| |||| ||| || | | |||| |     
T  39281948 tacgtacaagttgtctaaaataccaaaataacatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaagtt-gtcatgtgttg 39281850  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    || | | ||||||||| |||||||||||| |||| |||||||||||| || || ||||||||||||||||||||||    
T  39281849 ttatgcattgtgttgtgctgttctatcttatactattctgtccagtacttactgttttgcaaaccaaacacaccct 39281774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 6029422 - 6029597
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| ||||| || |||| |||| | ||||| |||| |||||| ||||| ||||||||| |||| |||||||| |    
T  6029422 acgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgt 6029520  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    | | ||||||||||| |||||||   || |||||| |||||||||| || || ||||||||||||||| ||||||||    
T  6029521 tatgccttgtgttgtgctgttctgcattatactgtgctgtccagtacttactattttgcaaaccaaacgcaccctaa 6029597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 16437415 - 16437259
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |  | |||||||||||| ||||||||||||||||||||||| |||||||| ||||| |       
T  16437415 acgtacaagttgtctaaaatatcaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccata-aaaatttgtcctgtac--- 16437320  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
                |||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  16437319 ------------tgtactgttctatcttatactgttctgtccagtatttgctgttttacaaaccaaacacacc 16437259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 6144107 - 6144276
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||| ||||||||| ||||||||  ||| |||||| ||||| ||| ||||||| ||||| |||| ||||||||| | |||| | |    
T  6144107 acgtagaagttgtctaaaacacaaaaataacattttgtcacccaaaaatcatataaaacagaaaattattcaataccat-aaaaatttgtcttgtgatgt 6144205  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| |||| ||||||  ||  ||||||||||||||||||| ||||  || || ||||||||||||||||||    
T  6144206 tctgccttatgttgtgttgccctatcttgtactgttctgttcagtgattactgttttgcaaaccaaacaca 6144276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 34663971 - 34663858
Alignment:
Q  11 ttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttg 110  Q
    ||||||||||||  |||||| ||||||||  | | |||||| ||||| ||||||||||||| |||||||||||||||||| | |||||| |||||||||     
T  34663971 ttgtctaaaatatcaaaataacattttgtcactcaaaaatcatataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctcttctacctta 34663872  T
Q  111 tgttgtactgttct 124  Q
    ||||||||||||||    
T  34663871 tgttgtactgttct 34663858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 169
Target Start/End: Original strand, 11772756 - 11772919
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||| |||| | |||||| ||||||  |||| || |||| |||||||||||| ||||||||| | ||||  ||||||||| |||| |||||||||||||    
T  11772756 tacaaattgttttaaataccaaaatagtatttcgtcccccaaaaatcgtataaaacaaaaaataattcaaaaccataaaaa-tttgtcctgtgctattct 11772854  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
     |||||||||||  |||| | |||||||||||| ||||||||| || |  |||||||||||||||    
T  11772855 gccttgtgttgtgttgttatgtcttgtactgttatgtccagtacttaccgttttgcaaaccaaac 11772919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 179
Target Start/End: Original strand, 26764916 - 26765087
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  |||| || || | ||||||||||| || ||||||||   |||||| ||||||| |||| ||| |  | |    
T  26764916 acgtacaagttgtctaaaataccaaaataatatttcgtccctcaaaaatcgtata-ta-aaaaaatt---caatgctataaaaa-tttgtcctatattgt 26765009  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    ||| |||||||||||  ||||||||||||||||||||||||||||| || || ||||||||| |||||||||| ||||    
T  26765010 tctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccttaag 26765087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 15540010 - 15540155
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||| ||||||||||||| || |||||| |||||||| |||| |||||| ||||| ||||||||||| ||||| ||||||||| || | | |||| |     
T  15540010 tacgtagaagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaacaaaaaattattcaataccataaaaactt-gtcatgtgttg 15540108  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    || | ||||||||||| |||||||   ||||||||||||||||||||    
T  15540109 ttatgccttgtgttgtgctgttctgcattgtactgttctgtccagta 15540155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 49303474 - 49303548
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatg 76  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||| |||||||||||| ||||||||||||||||||    
T  49303474 tacgtacaagttgtctaaaatactaaaataacattttg-tccccaaaaatcgtataaaacaaaaaattactcaatg 49303548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 16704776 - 16704604
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa-ttactcaatgccataaaaaatttgacctgtgctattc 103  Q
    ||||||||||||||||||| |||||| | |||||| | || |||||||||||| |||||||| ||| | |||||||| ||||||||| | ||| ||||||    
T  16704776 tacaagttgtctaaaataccaaaatagctttttgtcctccaaaaatcgtataaaacaaaaaatttatttaatgccat-aaaaatttgtcttgtactattc 16704678  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    | | || |||| |  |||||| ||||||  |||| ||||||||| || || ||||| ||||||||| |||||||    
T  16704677 tgctttatgttttgttgttctgtcttgtgttgttatgtccagtactttctgttttgaaaaccaaactcacccta 16704604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 42705359 - 42705447
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttg 90  Q
    ||||||||||||||| ||||   |||||| |||||||| |||| |||||| ||||| ||||||||||||||| ||||||||||||||||    
T  42705359 acgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaatcatataaaacaaaaaattactcattgccataaaaaatttg 42705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 25 - 170
Target Start/End: Complemental strand, 10384397 - 10384253
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| ||||| || |||| |||||| ||||| ||||||||||| ||||||| |||||||||| | || ||| | || | || |||||||| ||||||     
T  10384397 aaaataacatttcgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaatt-gtccagtgttgttttgccctgtgttgtgctgttcg 10384299  T
Q  125 atcttgtactgttctgtccagtatttgctcttttgcaaaccaaaca 170  Q
     |||||||||||| || |||||| || || ||||||||||||||||    
T  10384298 gtcttgtactgttatgcccagtacttactgttttgcaaaccaaaca 10384253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 45658871 - 45658755
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| | |||||| |||||| ||||| || |||| |||||| ||||| ||||||||||| |||| ||||| ||||||||| | |||||||||||    
T  45658871 tacaagttgttttaaataccaaaatagcatttcgtcccccaaaaatcatataaaacaaaaaattattcaaagccat-aaaaatttgtcatgtgctattct 45658773  T
Q  105 accttgtgttgtactgtt 122  Q
      |||||||||| |||||    
T  45658772 gtcttgtgttgtgctgtt 45658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 32289465 - 32289600
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| |||||||| |||||| |||||||| || | |||||  ||||| ||| ||||||| |||||| ||||||| ||||  ||| || | |    
T  32289465 acgtacaagttgtttaaaataccaaaatagcattttgtccctcaaaaattatataaaacataaaattattcaatgtcataaaatatttatcctatgttgt 32289564  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgtt 137  Q
    |||  ||| |||| |||| |||||||||||||||||    
T  32289565 tctggcttatgttatactcttctatcttgtactgtt 32289600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 50382524 - 50382607
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||||||||||||||||| ||||||||| |||||||| || | |||||| ||||| |||||| |||| ||||| |||||||||    
T  50382524 acgtacaagttgtctaaaacacaaaaataacattttgtccctcaaaaatcatataaaacaaaatattattcaataccataaaaa 50382607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 30105912 - 30105962
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  30105912 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccctaa 30105962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 26118447 - 26118494
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  26118447 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 26118494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 116
Target Start/End: Original strand, 13994198 - 13994309
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| ||||| | ||||| |||||| ||||| ||| ||||||| |||||  |||| |||||||| | |||| | |||    
T  13994198 gtacaagttgtctaaaataccaaaatagcatttcg-tccccaaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttc 13994296  T
Q  104 taccttgtgttgt 116  Q
    | |||||| ||||    
T  13994297 tgccttgtattgt 13994309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32467941 - 32468029
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaattt 89  Q
    ||||||||||||||||| ||||  ||||||   |||||||| |  |||||| ||||| ||||||||||| ||||| |||||||||||||    
T  32467941 tacgtacaagttgtctacaatatcaaaatagttttttgttcacaaaaaatcatataagacaaaaaattagtcaataccataaaaaattt 32468029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 130
Target Start/End: Original strand, 504518 - 504639
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||||||| ||| || | |||||||| || ||||||||| |  || |||||||   |||| |||||||| ||||||| |||| ||||||||     
T  504518 aagttgtctaaaataccaaagtagctttttgttcaccaaaaatcgtagaggactaaaaattgtccaataccataaaa-atttgacatgtgttattctact 504616  T
Q  108 ttgtgttgtactgttctatcttg 130  Q
    |||||||||  ||||| ||||||    
T  504617 ttgtgttgtgttgttccatcttg 504639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 61 - 174
Target Start/End: Complemental strand, 8838932 - 8838820
Alignment:
Q  61 aaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgc 160  Q
    ||||||||| ||||||| ||||||| ||||   |||| | ||||| ||||||||||  |||||| |||| ||| ||| |||| ||||||| || ||||||    
T  8838932 aaaaaattattcaatgctataaaaa-tttgttatgtgtttttctatcttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgc 8838834  T
Q  161 aaaccaaacacacc 174  Q
    ||||||||| ||||    
T  8838833 aaaccaaacgcacc 8838820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 30105041 - 30104980
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa 66  Q
    ||||||||||||||||||| |||||| |||||||||| |  || ||||| ||| ||||||||    
T  30105041 tacaagttgtctaaaataccaaaataacattttgttcgctaaatatcgtttaagacaaaaaa 30104980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 150
Target Start/End: Complemental strand, 7836623 - 7836509
Alignment:
Q  32 cattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgt 131  Q
    |||||||| |||| ||| |||||||| ||||||||||| |||||  ||| || || |||  ||||| ||||||||||| |||| |  |||||||   |||    
T  7836623 cattttgtgccccaaaactcgtataaaacaaaaaattattcaatatcat-aataacttgttctgtgttattctaccttatgttatgttgttcta---tgt 7836528  T
Q  132 actgttctgtccagtattt 150  Q
    ||||||||||||| |||||    
T  7836527 actgttctgtccaatattt 7836509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 35701321 - 35701147
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||| |||||||||||||||| |||||| |||    
T  35701321 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttat 35701222  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  35701221 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 35701147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 2351724 - 2351552
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||||||| || |||||||||||||||||||||||||||||||  |||||| | |    
T  2351724 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtacaaaacaaaaaattactcaatgccataaaaaatttatcctgtgttgt 2351625  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  2351624 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 2351552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 4818192 - 4818364
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  4818192 acgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgt 4818291  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  4818292 tctgccttgtgttgcactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 4818364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 7523216 - 7523041
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa-ttactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||     
T  7523216 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaattactcaatgtcataaaaaatttgtcctgtgctg 7523117  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||||||||||    
T  7523116 ttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgcaaaccaaacacaccct 7523041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 32528759 - 32528584
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||||| |    
T  32528759 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgt 32528660  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| || || ||||||||| |||||||||||||    
T  32528659 tctgccttatgttgtactgttctatcttgtactgttctgtccagtacttactattttgcaaatcaaacacacccta 32528584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 11963385 - 11963216
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||| ||||||||||||||||| |||||| |||||||| || | |||||||||||| | | |||||||||||||||||||||||||||| | |||| |||    
T  11963385 acgtgcaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaatacaaaattactcaatgccataaaaaatttgtcatgtgttat 11963286  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    ||| | |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  11963285 tctgctttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 11963216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 40182506 - 40182335
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| ||||||||  | | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| ||     
T  40182506 gtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttt 40182407  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | ||||||||||||||||||| ||||||| |||||||||||||| ||||| ||||| |||||||||||||||    
T  40182406 tgccttgtgttgtactgttctttcttgtattgttctgtccagtacttgctgttttggaaaccaaacacaccc 40182335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 39918551 - 39918379
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||| ||||||||||||| | |||||| ||||| |||||| | |    
T  39918551 acgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatactataaaatatttgtcctgtgttgt 39918452  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||   |||||||||||||||||||    
T  39918451 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtacttact-gattgcaaaccaaacacaccc 39918379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 6284350 - 6284524
Alignment:
Q  2 acgtacaagttgtctaaaatac-aaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||| ||||||| ||||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | ||||||     
T  6284350 acgtacaagttgtccaaaataccaaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctg 6284449  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | || |||||||||||||||||||||||| || |||||||||||||| ||||| ||||| ||| |||||||||||    
T  6284450 tactgccttgtgttgtactgttctatcttatattgttctgtccagtacttgctgttttgtaaatcaaacacaccc 6284524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 41790514 - 41790688
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||| ||||| | |||| | |    
T  41790514 acgtacaaattgtctaaaatactaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcatgtgttgt 41790613  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||||||||||||||| || ||||||||||||||||| || || ||||| ||||||||||||||||    
T  41790614 tctgccttgtgttgtactgttctattttatactgttctgtccagtacttactgttttgtaaaccaaacacaccct 41790688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 34794931 - 34794765
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||| |||||| ||||||||||||| ||| |||||||| ||||||||||| ||||||||| |||||||||  | |||| | |    
T  34794931 acgtataagttgtctaaaataccaaaatagcattttgttccccaaaattcgtataaaacaaaaaattattcaatgccacaaaaaatttatcatgtgttgt 34794832  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaa 168  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||    
T  34794831 tctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaaa 34794765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 31770643 - 31770782
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||| |||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  31770643 acgtacaagttgtctgaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 31770742  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgt 141  Q
    ||| |||||||||||||||||||||||| |||||||||||    
T  31770743 tctgccttgtgttgtactgttctatcttatactgttctgt 31770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 21739213 - 21739381
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||||||||||| ||||||||||||||||||| ||||     |    
T  21739213 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaaaaaattacacaatgccataaaaaatttgtcctg-----t 21739307  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||  ||||||||||||||||||||||| || |||| ||||||||| ||||| |||||||||||||||||||||    
T  21739308 tctgtcttgtgttgtactgttctatcttatattgttatgtccagtacttgctgttttgcaaaccaaacacaccc 21739381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 8136882 - 8136710
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| |||||| ||||  || |||  ||||| |||||| |||||| ||||||||||||||||||||| ||| |||||| |     
T  8136882 tacgtacaagttgtctaaaataccaaaataacatt--gtccccaaaaaatagtataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttg 8136785  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    || | ||||||||||||||||||||||||||||| |||||||||||| || || |||| ||||||||||||||||    
T  8136784 ttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttactgttttacaaaccaaacacaccc 8136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 22493471 - 22493643
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| ||||||||||||||| ||||||||||||||||  ||||||| |    
T  22493471 acgtacaagttgtctaaaatatcaaaatagcattttgt-ccgcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgttctgtgctgt 22493569  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||  | |||| ||||| ||||||||||||| || ||| | |||||| ||||||||||||||    
T  22493570 tctaccttgtgttgtgttattctgtcttgcactgttctgtccaatacttgttgttttgcgaaccaaacacaccc 22493643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 153
Target Start/End: Original strand, 700653 - 700804
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| ||||||| ||||||| |||| |||||| ||||| ||||||||||||||| ||||||||||| |||| | |||||| |    
T  700653 acgtacaagttatctaaaataccaaaatattattttgtcccccgaaaatcatataaaacaaaaaattactcattgccataaaaattttgtcatgtgctgt 700752  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgct 153  Q
    |||||||||||||||| | || | |||||||||||| |||||||||||||||    
T  700753 tctaccttgtgttgtattattttgtcttgtactgttatgtccagtatttgct 700804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 3735401 - 3735230
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| | || |||||||||||| ||||||||||| |||||| ||| ||||||||| ||| |||| |    
T  3735401 acgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctatgctgt 3735303  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||| |||| || |||| |||||||||||||||| |||||  |||| ||||||||||||||| ||||    
T  3735302 tctcccttgtattgtgctattctttcttgtactgttctgtacagtacctgctgttttgcaaaccaaacgcacc 3735230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 169
Target Start/End: Original strand, 7770331 - 7770497
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||| |||||||||||||||| ||||| |  |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| ||||||||||    
T  7770331 acgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgctat 7770429  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    |||  ||||||||||  |||||| ||||||||  || ||||||||| ||||| |||||||||||||||    
T  7770430 tctgtcttgtgttgtgttgttctgtcttgtacgattatgtccagtacttgctgttttgcaaaccaaac 7770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 24181676 - 24181798
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||| |||||| |||||||| |||| || ||||||||| |||| ||||||||||||||||||||||||||| |||||||| |    
T  24181676 acgtataagttgtctaaaataccaaaatagcattttgtcccccaaagatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgt 24181775  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  24181776 tctgccttgtgttgtactgttct 24181798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 29241422 - 29241300
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||| ||||||||  |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  29241422 acgtacaagttggctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 29241323  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  29241322 tctgccttgtgttgtactgttct 29241300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 13 - 172
Target Start/End: Complemental strand, 5673177 - 5673018
Alignment:
Q  13 gtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtg 112  Q
    ||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||||||| |||||||||| ||||| ||| || | || | |||||||    
T  5673177 gtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaatatttgtcctttgatgttatgccttgtg 5673078  T
Q  113 ttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||| ||||| ||||||||||||||||||| |||| || || ||||| ||||||||||||    
T  5673077 ttgtgctgttatatcttgtactgttctgtcaagtacttactgttttgtaaaccaaacaca 5673018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31880127 - 31880250
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| |||||| |||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||||| | ||| ||     
T  31880127 tacgtacaagttgtctaaaataccaaaatagcattttgtcccccaacaatcgtataatacaaaaaattattcaatgtcataaaaaatttgtcatgtactg 31880226  T
Q  101 ttctaccttgtgttgtactgttct 124  Q
    |||| |||||||||||||||||||    
T  31880227 ttctgccttgtgttgtactgttct 31880250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 41459633 - 41459511
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| |||||||||||||||||||||| |||  |||| |||||||| |    
T  41459633 acgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccattaaatttttgtcctgtgctgt 41459534  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||||||||||||||||||||||    
T  41459533 tctaccttgtgttgtactgttct 41459511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 4689750 - 4689925
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||| |||||||||||||||| ||||| |  |||| ||| |||||||| ||||||||||| |||||| ||| ||||||||| | |||| | |    
T  4689750 acgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaagtcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcatgtgttgt 4689848  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||| ||||||  |||||| |||||||||||| |||||| || ||||| ||||||||||||||| ||||||||    
T  4689849 tctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgctgttttgcaaaccaaacgcaccctaa 4689925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 28090572 - 28090699
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| |||||||| || | |||||||||||| |||||||||||||||||   |||||||||||| ||||| || |    
T  28090572 acgtacaagttgtctaaaatacaaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaataatataaaaaatttgtcctgtactgt 28090671  T
Q  102 tctaccttgtgttgtactgttctatctt 129  Q
    ||| || || ||||||||||||||||||    
T  28090672 tctgccgtgagttgtactgttctatctt 28090699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 7208282 - 7208404
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||||| | |||||||||||| |||||||||||||||||||||||||| ||||| || ||||| |    
T  7208282 acgtacaagttgtctaaaataccaaaatagcattttgttcctcaaaaatcgtataaaacaaaaaattactcaatgccataaaatatttgtcccgtgctgt 7208381  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||   ||||| ||||||||||||    
T  7208382 tccgtcttgtattgtactgttct 7208404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 5571696 - 5571806
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||  || |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  5571696 acgtacaagttgtctaaaataccaaaatagcatt--gtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 5571793  T
Q  102 tctaccttgtgtt 114  Q
    ||| |||||||||    
T  5571794 tctgccttgtgtt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 39788237 - 39788114
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcatttt-gttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||| || |||| |||||||||||| ||||||||||||||||| |||||||||||||| | ||||||     
T  39788237 acgtacaagttgtctaaaatactaaaataacatttttgtcccccaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcatgtgctg 39788138  T
Q  101 ttctaccttgtgttgtactgttct 124  Q
    |||| | || ||||||||||||||    
T  39788137 ttctgcattatgttgtactgttct 39788114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 40489378 - 40489239
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||||||||||||||||||||||||||||||| | ||   | ||||    
T  40489378 tacaagttgtctaaaataccaaaataacattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgcattgttct 40489279  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtcca 144  Q
     | || ||||||||||||| |||||||||| |||||||||    
T  40489278 gctttatgttgtactgttcaatcttgtactattctgtcca 40489239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 7725861 - 7726034
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||   | |||||| ||||| || |||| |||||||||||| ||||||||||| ||||| ||||||||| |||| ||| | ||||    
T  7725861 acgtataagttgtctaaatatccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaattccataaaaa-tttgtcctatactat 7725959  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||||||||||||||  ||| || |||||||||||| |||| |||| || || ||||||||| ||||||||||||    
T  7725960 tctaccttgtgttgtgatgtactgtcttgtactgttatgtctagtacttactgttttgcaaatcaaacacaccct 7726034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 24036274 - 24036105
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||  |||| |||||||||||| ||||||||||| ||||||   | ||||||||| | |||| | |    
T  24036274 acgtacaagttgtctaaaataccaaaataacattttgcaccccaaaaatcgtataaaacaaaaaattattcaatg---tcaaaaatttgtcatgtgttgt 24036178  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  ||| |||||| ||||||| ||||||||||||| || ||||| ||  | ||||||||||||||||||||    
T  24036177 tctgtcttatgttgtgctgttctgtcttgtactgttcagtacagtacttattgttttgcaaaccaaacacacc 24036105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 31644490 - 31644317
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||  |||||| ||||| ||| ||||||| |||||| ||| ||||||||| | |||| | |    
T  31644490 acgtacaagttgtctaaaataccaaaatagcattttgtcccctaaaaatcatataaaacataaaattattcaatgtcat-aaaaatttgtcttgtgttgt 31644392  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||||||||| |||| || |||| |||||||||||||||  | |||  |||| ||||||||||||||| |||||||    
T  31644391 tctaccttgtattgtgctattct-tcttgtactgttctgcactgtacatgctgttttgcaaaccaaacgcacccta 31644317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 23091356 - 23091478
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| || ||||||||||||  |||||| |||||||| || | |||||||||||| |||||| ||||||||||||||||| ||||||| | |||| | |    
T  23091356 acgtataaattgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaacaaaacattactcaatgccataagaaatttgtcttgtgttgt 23091455  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||| ||||||||||||||||||    
T  23091456 tctatcttgtgttgtactgttct 23091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 174
Target Start/End: Original strand, 37148632 - 37148797
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    ||||||||||||| || |||||| ||||| || |||| ||||   ||||| | || |||||| ||||| ||||||||| |||| |||||||| || ||||    
T  37148632 aagttgtctaaaacaccaaaatagcatttcgtcccccaaaaagaatataaaataagaaattattcaataccataaaaa-tttgtcctgtgctgttatacc 37148730  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||||||||| ||||||| | || ||||||| ||||||||| || || ||||||||||||||| ||||    
T  37148731 ttgtgttgtgctgttctgtattatactgttttgtccagtacttactgttttgcaaaccaaacgcacc 37148797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 18470480 - 18470660
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| ||||| || |||| |||| | ||||| |||| |||||| ||||| |||| |||||||||  ||||||| |    
T  18470480 acgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgttctgtgctgt 18470578  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagtt 183  Q
    | |  ||||| |||| |||||||   || |||||| |||||||||| || || ||||||||||||||| ||||| |||||||    
T  18470579 tatgtcttgtattgtgctgttctgcattatactgtgctgtccagtacttactattttgcaaaccaaacgcacccaaagagtt 18470660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 20119734 - 20119642
Alignment:
Q  83 aaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||| | ||| || |||| ||||||||||| ||||||||||||||||||||||||||| || || || |||||||||||||||||||||    
T  20119734 aaaatttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctgtccaatacttactgttttgcaaaccaaacacaccc 20119642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 101 - 176
Target Start/End: Complemental strand, 548293 - 548218
Alignment:
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||| ||  | ||||||||||||||||||||||    
T  548293 ttctgccttatgttgtactgttctatcttgtactgttctgtccagtacttaatgttttgcaaaccaaacacaccct 548218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 553441 - 553346
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgt 96  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||| |||||||| ||| ||||||| |||||||||||||| ||||| |||||    
T  553441 acgtacaagttgtctaaaataccaaaataacattttgtccccccaaaaatcgtataaaacataaaattattcaatgccataaaatatttgtcctgt 553346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 8561036 - 8561116
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||||||||||||| |||||| ||||| || |||| |||||||||||| ||||||||||| |||||||||||||||    
T  8561036 gtacaagttgtctaaaataccaaaataacatttcgt-ccccaaaaatcgtataaaacaaaaaattaatcaatgccataaaaa 8561116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 7208393 - 7208444
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||    
T  7208393 ttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccctaag 7208444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 134
Target Start/End: Original strand, 22432363 - 22432489
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccata-aaaaatttgacctgtgctatt 102  Q
    |||||||||||||||||||| |||||| ||||| || |||| ||||||||||||   ||||||  | |||||  |||| ||||||||| | |||| | ||    
T  22432363 gtacaagttgtctaaaataccaaaatagcatttcgtcccccaaaaatcgtataa---aaaaaaaaaatcaat--catataaaaatttgtcatgtgttgtt 22432457  T
Q  103 ctaccttgtgttgtactgttctatcttgtact 134  Q
    |||||||||||||| ||||||| ||| |||||    
T  22432458 ctaccttgtgttgtgctgttctgtctagtact 22432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 32093033 - 32093206
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| || |||||||||| |||||| ||||| || |||| |||||  ||||| ||| |||| |  ||||| ||||||||| ||||   |||||| |    
T  32093033 acgtacaaattatctaaaataccaaaatagcatttcgtcccccaaaaattatataaaacataaaaattttcaataccataaaaa-tttgtgttgtgctgt 32093131  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| ||||||||| |  |||||| |||  ||||||||||||||||| ||   |||||||||| ||||| ||||||||    
T  32093132 tctgccttgtgttatgttgttctgtctcttactgttctgtccagtactt--acttttgcaaatcaaacgcaccctaa 32093206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 24181787 - 24181835
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||    
T  24181787 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccct 24181835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 27839213 - 27839295
Alignment:
Q  94 tgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||||||||||  ||| ||||||  || |||||||||||  |||||||||||||||| || |||| |||||||||| ||||||    
T  27839213 tgtgctattctgtcttatgttgtgttgctctatcttgtatcgttctgtccagtattttctgtttttcaaaccaaacgcaccct 27839295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 31880239 - 31880286
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || || ||||||||| |||||||||||    
T  31880239 ttgtactgttctgtccagtacttactgttttgcaaatcaaacacaccc 31880286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 27839127 - 27839181
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataat 58  Q
    |||||||||||||||||||| |||||| | |||||| | || |||||||||||||    
T  27839127 gtacaagttgtctaaaataccaaaatagccttttgtcctccaaaaatcgtataat 27839181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 35955013 - 35954916
Alignment:
Q  46 aaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtcca 144  Q
    |||||||||| | ||||||||||| ||||| ||||||||| |||  ||  | ||||| | ||||||| ||| ||||||| ||||| |||||||||||||    
T  35955013 aaaatcgtattagacaaaaaattattcaataccataaaaa-tttatccaatactattttgccttgtgatgtgctgttctgtcttgcactgttctgtcca 35954916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 612581 - 612520
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa 66  Q
    |||||||||||||| |||| ||||||  ||||||||| || || ||||||||| ||||||||    
T  612581 tacaagttgtctaacataccaaaatactattttgttcaccaaacatcgtataagacaaaaaa 612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 1e-63; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 45446499 - 45446324
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  45446499 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 45446400  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  45446399 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacacccta 45446324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 32303646 - 32303819
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  32303646 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 32303745  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  32303746 tctgccttttgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 32303819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 32020062 - 32020233
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  32020062 acgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 32020161  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32020162 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32020233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 6386620 - 6386446
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||   |||||| |    
T  6386620 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgtgctgt 6386521  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||    
T  6386520 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgttgttttgcaaaccaaacacaccct 6386446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 8673116 - 8673292
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| ||||||||||||||||||||||||||| |||| |||||||| |    
T  8673116 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgt 8673215  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    | | |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  8673216 tttgccttgtgttgtactgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacacaccctaa 8673292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 41709821 - 41709645
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||| ||| |||||||| |    
T  41709821 acgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgctgt 41709722  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||||||    
T  41709721 tctgccttgtgttgtactgttctatcttgtattgttctgtccagtacttactgttttgcaaaccaaacacaccctaa 41709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 29563287 - 29563462
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  29563287 acgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgt 29563386  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||||||||||||    
T  29563387 tctaccttgtgttgtactgttctatcttgtactgttctgttcaatacttgctgttttgcaaaccaaacacacccta 29563462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 34101552 - 34101374
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||| ||||||||||||||| |||||| | |    
T  34101552 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgatgt 34101453  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||| |||||||||||||||||||||||| ||||||| ||||||||| || || ||||||||||||||||||||| ||||    
T  34101452 tctgccttgtgttgtactgttctatcttatactgttttgtccagtacttacttttttgcaaaccaaacacacccaaaga 34101374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 34063172 - 34062995
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||| | |    
T  34063172 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgt 34063073  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
     || |||| ||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||    
T  34063072 gctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgcggttttgcaaaccaaacacaccctaag 34062995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 13406996 - 13407167
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||||||||||||||||||| |||||||||||| | |||| | |    
T  13406996 acgtacaagttgtctaaaataccaaaatagcattttgtgccccaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcatgtgttgt 13407095  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| || || ||||| |||||||||||||    
T  13407096 tctgccttgtgttgtactgttctatattgtactgttctgtccagtacttactgttttgtaaaccaaacacac 13407167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 3251716 - 3251890
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||     
T  3251716 tacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctg 3251815  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||||||||||||||||| || ||||||||||  || || || |||||||||||||||||||||    
T  3251816 ttctgccttgtgttgtactgttctatcttatattgttctgtccgatacttactgttttgcaaaccaaacacaccc 3251890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 27104003 - 27103829
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  27104003 acgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 27103904  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||||    
T  27103903 tctgccttgtgttgtaatgttctatcttgtactgttctgtccagtacttgttgttttgcaaatcaaacacaccct 27103829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 31732105 - 31731935
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||| |||| | |||||||||||    
T  31732105 tacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctattct 31732006  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
      ||||||||||||||||||||||| |||| |||||||||||| || || |||||||||||||||||||||    
T  31732005 gtcttgtgttgtactgttctatcttatacttttctgtccagtacttactgttttgcaaaccaaacacaccc 31731935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 31513646 - 31513819
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |||    
T  31513646 gtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttc 31513745  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    | |||||||||||||||||||||||||||||||| |||||| || || || |||||||||||||||||||||||    
T  31513746 tgccttgtgttgtactgttctatcttgtactgttttgtccaatacttactgttttgcaaaccaaacacacccta 31513819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 144
Target Start/End: Original strand, 5968925 - 5969067
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||| || | |    
T  5968925 acgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgt 5969024  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtcca 144  Q
    ||| |||||||||||||||||||||||||||||||||||||||    
T  5969025 tctgccttgtgttgtactgttctatcttgtactgttctgtcca 5969067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 29672384 - 29672562
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||| ||||||||| |||||| | |    
T  29672384 acgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccatgaaaaatttgtcctgtgttgt 29672483  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    |||  ||||||||| |||||||||||||||| |||||||||||||  || || |||| |||||||||||||||| ||||    
T  29672484 tctgtcttgtgttgcactgttctatcttgtattgttctgtccagttcttactgttttacaaaccaaacacacccaaaga 29672562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 171
Target Start/End: Original strand, 12753389 - 12753554
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||||||||||| |||| |||||||||||||||||||||  |||| | |||| | ||||    
T  12753389 tacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaatttttgtcatgtgttgttct 12753488  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
      ||||||||||| |||||||||||||||||||||||||| || || || |||||||||||||||||    
T  12753489 gtcttgtgttgtattgttctatcttgtactgttctgtccaatactt-ctgttttgcaaaccaaacac 12753554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 25478288 - 25478115
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| ||||||  ||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||| ||||         
T  25478288 tacgtacaagttgtctaaaataccaaaatagtattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctg----- 25478194  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    |||| |||||||||||| ||||||||||| ||||||| |||| |||| || || |||| ||||||||||||||||||||    
T  25478193 ttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttactgttttacaaaccaaacacaccctaag 25478115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 17805735 - 17805563
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttc-ccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||||| | ||| |||||||||||| ||||||||||||||  |||| ||||||||||| |||||| |     
T  17805735 acgtacaagttgtctaaaataccaaaataacattttgtcctcccaaaaatcgtataaaacaaaaaattactcgttgccctaaaaaatttgtcctgtgttg 17805636  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||||||||||||||||  | |||| |||||||||||| |||| |||| || || |||||||||||||||||||    
T  17805635 ttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgcaaaccaaacacac 17805563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 7394875 - 7395045
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | ||||||| |||| ||||||||||||||| |||||||||||| ||| ||| |||| |    
T  7394875 acgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgcataaaacaaaaaattactcagtgccataaaaaacttgtcctatgctgt 7394974  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||  ||||||||||||||||||||||| || ||||||||| ||||  | || ||||||||||||||||||    
T  7394975 tctgtcttgtgttgtactgttctatcttatattgttctgtcaagtacctactgttttgcaaaccaaacaca 7395045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 30543083 - 30543205
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||| ||||| |||||| | |    
T  30543083 acgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctgtgttgt 30543182  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  30543183 tctgccttgtgttgtactgttct 30543205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 4052524 - 4052404
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||  |||||||||||||||||||||||| |||||||| |    
T  4052524 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaa--ttactcaatgccataaaaaatttgtcctgtgctgt 4052427  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  4052426 tctgccttgtgttgtactgttct 4052404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 15001510 - 15001344
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| ||||| || |||| |||||| ||||| ||| ||||||| ||||| |||||||||||||  | |||| | |    
T  15001510 acgtacaagttatctaaaataccaaaatagcattt-gtcccccaaaaatcatataaaacagaaaattattcaataccataaaaaatttatcttgtgttgt 15001412  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| ||||||||||| ||||||| |||||||||||||||||||||| || || |||||||||||||||    
T  15001411 tctgccttgtgttgtgctgttctgtcttgtactgttctgtccagtacttactgttttgcaaaccaaac 15001344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 22999301 - 22999126
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||  |||||| |||||||| | || |||||||||||| ||||||||||| |||||| ||| |||||||||  ||||||| |    
T  22999301 acgtacaacttgtctaaaatatcaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgttctgtgctgt 22999203  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||| |||| ||||||| |||||||||||| |||   ||| ||||| ||||||||||||||| ||||||||    
T  22999202 tctcccttgtattgtgctgttctttcttgtactgttttgtattgtacttgctgttttgcaaaccaaacgcaccctaa 22999126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 136
Target Start/End: Original strand, 7591508 - 7591641
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||||| |    
T  7591508 acgtataagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgctgt 7591606  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgt 136  Q
    ||| |||||| |||||||||||| |||||||||||    
T  7591607 tctcccttgtattgtactgttctttcttgtactgt 7591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 37664344 - 37664466
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||  | | |||||| ||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  37664344 acgtacaagttgtctaaaataccaaaatagcattttgtcgctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgt 37664443  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| | |||||||||||||||||    
T  37664444 tctgcattgtgttgtactgttct 37664466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 37618453 - 37618626
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| | |||||| |||||| ||||| || |||| ||||| |||||| ||||||||||| |||||||||| ||| ||||| | |||||| |    
T  37618453 acgtacaagttgttttaaataccaaaatagcatttcgtcccccaaaaattgtataaaacaaaaaattattcaatgccat-aaacatttgtcatgtgctgt 37618551  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||||| ||||| | | |||||||||| ||||||||| || |  ||||||||||||||| ||||||    
T  37618552 tctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttaccgttttgcaaaccaaacgcaccct 37618626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 173
Target Start/End: Complemental strand, 45114097 - 45113929
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| ||||| || | || |||||||||||| ||| ||||||| |||||| |||| ||| |||  | |||| | ||     
T  45114097 gtacaagttgtctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaa-tttatcatgtgttgtta 45113999  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | ||||||||||| ||| |||||||||||||||| ||||||||| || || |||||||||||||||||||    
T  45113998 tgccttgtgttgtgctgctctatcttgtactgttatgtccagtacttactgttttgcaaaccaaacacac 45113929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 30501189 - 30501015
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||| |||||||||||||||| ||||| |  |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| ||| || | |    
T  30501189 acgtacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctatggtgt 30501091  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    | |  ||| ||||||  |||||| ||||||||| || |||| |||||||| | ||||||||||||||| |||||||    
T  30501090 tttgtcttatgttgtgttgttctgtcttgtactattatgtcaagtatttgttgttttgcaaaccaaacgcacccta 30501015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 136
Target Start/End: Complemental strand, 41548662 - 41548529
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||| | |    
T  41548662 acgtacaagttgtctaaaatatcaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgatgt 41548564  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgt 136  Q
    ||| |||||| ||||  |||||| |||||||||||    
T  41548563 tctcccttgtattgtgttgttctttcttgtactgt 41548529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 172
Target Start/End: Complemental strand, 35225704 - 35225537
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    ||||||||||||||||||||||||||| ||||| ||  ||| |||||| ||||| |||  |||||| ||||| |||| ||||||||| | |||| | |||    
T  35225704 gtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaatcatataaaacaggaaattattcaataccat-aaaaatttgtcttgtgttgttc 35225606  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |  ||||||||||  ||| || ||||||||| |||||||||||| || || ||||||||||||||||||    
T  35225605 tgtcttgtgttgtgttgtcctgtcttgtactattctgtccagtacttactgttttgcaaaccaaacaca 35225537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 14005105 - 14005227
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |    ||||| |||||| |||||||||||||||||| ||||||||||||| ||| || | |    
T  14005105 acgtacaagttgtctaaaataccaaaataacattttgtccataaaaaattgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctatgttgt 14005204  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||  ||||||||||||||||||    
T  14005205 tctgtcttgtgttgtactgttct 14005227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 178
Target Start/End: Complemental strand, 40389081 - 40388909
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| | |||| | |||||| ||||| || |||| |||||||||||| | ||||||||| |||||||||| |||| |||  |||||| | ||||    
T  40389081 tacaagttgttttaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaataaaaaattattcaatgccat-aaaattttttcctgtgttgttct 40388983  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
     ||||||||||| ||||| | ||||||||| || ||||||||| || |  ||||||||||||||| ||||||||    
T  40388982 gccttgtgttgtgctgttatgtcttgtactcttatgtccagtacttaccattttgcaaaccaaacgcaccctaa 40388909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 168
Target Start/End: Complemental strand, 37474761 - 37474598
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| ||| || | |||| |||||| |||||||||||| | ||||||||| |||||| ||| ||||||||| | |||||| ||     
T  37474761 gtacaagttgtctaaaataccaaactagcgtttttttccccaaaaatcgtataaaataaaaaattattcaatgtcat-aaaaatttgtcatgtgctgtta 37474663  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaa 168  Q
    | |||||| |||| ||||||| |||||||||| | | | | ||| ||||| ||||||||||||||    
T  37474662 tcccttgtattgtgctgttctttcttgtactgctatatgctgtacttgctgttttgcaaaccaaa 37474598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 10467108 - 10466995
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| || ||| ||| ||||||||| |||||||| |    
T  10467108 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattctatgtcat-aaaaatttgtcctgtgctgt 10467010  T
Q  102 tctaccttgtgttgt 116  Q
    ||| |||||| ||||    
T  10467009 tctcccttgtattgt 10466995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 16595210 - 16595354
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| ||||||||||||||||| | |||||||| || |||||||||||| || |||||||| ||||| ||| ||||| |||| | | | || |    
T  16595210 acgtacaagttatctaaaatacaaaaatagctttttgttcaccaaaaatcgtataagaccaaaaattattcaatacca-aaaaagtttgccatttacttt 16595308  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    ||| ||||||||| |  |||||| |||| |||||||||||||||||    
T  16595309 tctgccttgtgttttgttgttctgtcttatactgttctgtccagta 16595354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 83 - 171
Target Start/End: Complemental strand, 21272676 - 21272588
Alignment:
Q  83 aaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    |||||||| ||| |||| |||| ||||||||||||||| ||||||||||| ||||||||||| || ||||| |||||||||||||||||    
T  21272676 aaaatttgtcctatgctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgcaaaccaaacac 21272588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 955102 - 955168
Alignment:
Q  107 cttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| ||||| |||||||||||||    
T  955102 cttgtgttgtactgttctatcttgtactgttctgtcaagtacttgctgttttgtaaaccaaacacac 955168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 37861865 - 37861803
Alignment:
Q  62 aaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    ||||||||||||||||||||||||||||| | |||||| |||| |||||||||||||||||||    
T  37861865 aaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttct 37861803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 39642927 - 39642755
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||||||||||||| |||||| |||||  | |||| ||||| |||||| ||||||||||| |||||| ||| ||||||||| | |||| | |    
T  39642927 acgtacaggttgtctaaaataccaaaatagcatttcatcccccaaaaattgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcttgtgatgt 39642829  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||  |||   ||||  |||||| ||||||||| |||||| || || || || ||||||||||||||| |||||    
T  39642828 tctctcttacattgtgttgttctttcttgtactattctgtacaatacttactattttgcaaaccaaacgcaccc 39642755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 16485869 - 16486011
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||| ||||| ||||||||||||||||| ||||| ||  ||| |||||| ||||||||| ||||||| ||||| |||| |||||||||   ||||||     
T  16485869 tacgtataagttttctaaaatacaaaaatagcatttcgtcacccaaaaatcatataatacagaaaattattcaataccat-aaaaatttgttttgtgctg 16485967  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtcca 144  Q
    |||| |||| | ||||  ||| |||||||||| |||| ||||||    
T  16485968 ttctgccttatattgtgttgtcctatcttgtattgttatgtcca 16486011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 14005216 - 14005264
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14005216 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 14005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 147
Target Start/End: Complemental strand, 6460305 - 6460163
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||| |||||| |||||||| |    |||||||||||| ||  ||||||| ||||| |||| ||||||||| |||||||||     
T  6460305 acgtataagttgtctaaaataccaaaataacattttgtccataaaaaatcgtataagac--aaaattattcaataccat-aaaaatttgtcctgtgctac 6460209  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    ||| || |||| ||| ||||| | || ||||||||| |||| ||||    
T  6460208 tctgccctgtgctgtgctgttttgtcctgtactgttttgtcaagta 6460163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 116
Target Start/End: Original strand, 29611116 - 29611229
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||| || |||||| ||||| || |||| |||| | ||||| |||| |||||| ||||| |||| ||||||||| |||||| | |    
T  29611116 acgtaaaagttgtctaaaacaccaaaatagcatttcgtcccccaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgttgt 29611214  T
Q  102 tctaccttgtgttgt 116  Q
    | | |||||||||||    
T  29611215 tatgccttgtgttgt 29611229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 37861814 - 37861765
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||||||||||||||||||| || || ||||||||| |||||||||||||    
T  37861814 ttgtactgttctgtccagtacttactgttttgcaaatcaaacacacccta 37861765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 37664455 - 37664499
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||||||||||||||||||  ||||| ||||||||||||||||||    
T  37664455 ttgtactgttctgtccagtgcttgctgttttgcaaaccaaacaca 37664499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 134
Target Start/End: Original strand, 27109603 - 27109735
Alignment:
Q  3 cgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa--ttactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||| |||| |||||||| |||||| ||||| || |||| |||||| ||||| ||||||||  ||| ||||||| || |||| |||| ||||| |      
T  27109603 cgtacaaattgtttaaaataccaaaataacatttcgtcccccaaaaatcatataaaacaaaaaaaattattcaatgctattaaaa-tttgtcctgtaccg 27109701  T
Q  101 ttctaccttgtgttgtactgttctatcttgtact 134  Q
    |||| | |||| ||||  ||||||||||||||||    
T  27109702 ttctgcattgtattgtgttgttctatcttgtact 27109735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37861904 - 37861866
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgt 39  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  37861904 tacgtacaagttgtctaaaataccaaaatagcattttgt 37861866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 21272728 - 21272691
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgt 39  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  21272728 acgtacaagttgtctaaaatactaaaatagcattttgt 21272691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 23521927 - 23521753
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  23521927 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 23521828  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23521827 tctgccttgtgttgtactgttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 23521753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 43641146 - 43640972
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |    
T  43641146 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgt 43641047  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  43641046 tctgccttgtgttgtactgttctatcttgtactgttctgtctagtacttgctgttttgcaaaccaaacacaccct 43640972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 24002386 - 24002211
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttccc-ctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| ||||||  |||| | |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||     
T  24002386 acgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccaaaaaaaatttgtcctgtgctg 24002287  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  24002286 ttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 24002211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 20802570 - 20802748
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  20802570 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 20802669  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||||    
T  20802670 tctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttgctgttttgcaaaccaaacacacccaaaga 20802748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 49152139 - 49152311
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  49152139 acgtacaagttgtctaaaa-accaaaataacattttgtccatcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 49152237  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  49152238 tctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 49152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 56154668 - 56154492
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| | ||| || |    
T  56154668 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgt 56154569  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||||||||    
T  56154568 tctgccttgtgttgtactgttctatcttatactgttctgtccagtacttgttgttttgcaaaccaaacacaccctaa 56154492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 184
Target Start/End: Original strand, 9512379 - 9512561
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  9512379 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctat 9512478  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagtta 184  Q
    |||  ||| ||||| ||| ||||||||||||||||||||||  ||| ||||| ||||||||||||||||||||||||||||||    
T  9512479 tctgtcttttgttgcactattctatcttgtactgttctgtcacgtacttgctgttttgcaaaccaaacacaccctaagagtta 9512561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 14296644 - 14296471
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  14296644 acgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 14296545  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| | ||||||||||||||||||| |||| ||||||||||||||| ||  | ||||||||| |||||||||||    
T  14296544 tctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgttttgcaaatcaaacacaccc 14296471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 12600933 - 12600761
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| ||   |||||||| ||| |||||||| ||||||||||||||||||||||| |  ||||| |    
T  12600933 acgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtttaaaacaaaaaactactcaatgccataaaaaatttgtcaagtgctgt 12600834  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  12600833 tctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 12600761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 29785576 - 29785752
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||||| |    
T  29785576 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgt 29785675  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||||||||||||||||||||| ||||||||||| ||||| ||  | ||||||||| ||||||||||||||    
T  29785676 tctgccttgtgttgtactgttctatcttatactgttctgttcagtacttattgttttgcaaatcaaacacaccctaa 29785752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 14314892 - 14314719
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||  ||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  14314892 acgtacaagttgtctaaaataccaaaataacattttgtctcccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 14314793  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| | ||||||||||||||||||| |||| ||||||||||||||| ||  | ||| ||||| |||||||||||    
T  14314792 tctgctttgtgttgtactgttctatattgttctgttctgtccagtacttattgtttagcaaatcaaacacaccc 14314719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 21580073 - 21579900
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| ||| |||| || | |||||||||||| || |||||||||||||| |||||||||||||| |||||| | |    
T  21580073 acgtacaaattgtctaaaataccaaaatagcatgttgtccctcaaaaatcgtataaaactaaaaattactcaataccataaaaaatttgtcctgtgttgt 21579974  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||||    
T  21579973 tctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaacacaccc 21579900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 52319370 - 52319195
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||   |||||| |||||||| || | |||||||||||| |||||   |||||||||||||||||||||||| |||||| | |    
T  52319370 acgtacaagttgtctaaaatgtcaaaataacattttgtccctcaaaaatcgtataaaacaaa---ttactcaatgccataaaaaatttgtcctgtgttgt 52319274  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||    
T  52319273 tctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacacccgaaga 52319195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 9807204 - 9807028
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||| |||||| ||||| || | || |||||||||||| ||| ||||||| ||||||||||| ||| |||| ||||||||     
T  9807204 tacgtacaagttgtctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgccatacaaa-tttgtcctgtgctg 9807106  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    || | ||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  9807105 ttatgccttgtgttgtgctgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaacacaccctaa 9807028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 37865798 - 37865627
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| |||||||| || |  ||||||||||| ||||||||||| |||||||||||||||| ||| | |||| | |||    
T  37865798 gtacaagttgtctaaaataccaaaatagcattttgtccctcagaaatcgtataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttc 37865699  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | |||||||||||||||||||||||||||||||| ||||| ||| || || |||||||||||||||||||||    
T  37865698 tgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttactgttttgcaaaccaaacacaccc 37865627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 21202786 - 21202614
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||| | |||||| |    
T  21202786 acgtacaagttgtctaaaatatcaaaatagcattttgt-ccccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgt 21202688  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||   ||||||||| ||||||| |||||||||||| ||||||||| || || |||||||||||||||||||||    
T  21202687 tctgttttgtgttgtgctgttctgtcttgtactgttttgtccagtacttactattttgcaaaccaaacacaccc 21202614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 6776625 - 6776460
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||| |  |||||||||||||||  |   |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  6776625 acgtaaaagttgtctaaaacatcaaaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 6776526  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||||||    
T  6776525 tctgccttgtgttgtactgttctatcttgtactgttctgtcca------gctgttttgcaaaccaaacacac 6776460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 55065372 - 55065543
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |  | |||||||||||| ||||||||||||||||||||||||||| |||| |||||||| |    
T  55065372 acgtacaagttgtctaaaatatcaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaa-tttgtcctgtgctgt 55065470  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||||||| || |||||| ||||||| ||||||||| ||||| ||||||||||||||| ||||    
T  55065471 tctgccttgtgttgtactattttatcttatactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 55065543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 6 - 176
Target Start/End: Original strand, 33177075 - 33177245
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||| ||||| ||| || | ||||     
T  33177075 acaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctttgttgttctg 33177174  T
Q  106 ccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     ||||||||||||||||||||||| |||||||||||| |||| || |  ||||||||||||| ||||||||    
T  33177175 tcttgtgttgtactgttctatcttatactgttctgtcaagtacttaccgttttgcaaaccaagcacaccct 33177245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 20518061 - 20518196
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||  ||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  20518061 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 20518160  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgtt 137  Q
    ||| |||||||||||||| |||||||||||||||||    
T  20518161 tctgccttgtgttgtactattctatcttgtactgtt 20518196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 54543037 - 54542898
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||||||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| | |||||| |    
T  54543037 acgtacaagttgtctaaaataccaaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgacataaaaaatttgtcttgtgctgt 54542938  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgt 141  Q
    ||| | |||||||||||||||||||| |||||| ||||||    
T  54542937 tctgctttgtgttgtactgttctatcctgtactattctgt 54542898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 20694418 - 20694249
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||  ||||| ||||||||||||||| ||||||| |||||||| | ||||||||    
T  20694418 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaattatataaaacaaaaaattactcattgccatacaaaatttgtcatgtgctat 20694319  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||     ||||||||||||||||||||| |||| || || || ||||||||||||||||||||||    
T  20694318 tctgccttgtgt-----tgttctatcttgtactgttctatccattacttactgttttgcaaaccaaacacaccct 20694249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 36743727 - 36743901
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||| ||||||||||||||||||||||||||| | |||||| |    
T  36743727 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaacaaattactcaatgccataaaaaatttgtcttgtgctgt 36743826  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||| ||||||| | ||||||||||||| ||||| || |||| || || |||| |||||||||||||||||    
T  36743827 tctgccttatgttgtattattctatcttgtaccgttctatctagtacttactatttttcaaaccaaacacaccct 36743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 55593932 - 55593792
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||   ||   | |    
T  55593932 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgcattgt 55593833  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtc 142  Q
    ||| |||||||||||||||||||||||||||||||||||||    
T  55593832 tctgccttgtgttgtactgttctatcttgtactgttctgtc 55593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 177
Target Start/End: Original strand, 38486296 - 38486466
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | ||||| |||||| |||||||||||||||| ||||||||||||||| |||||||| |    
T  38486296 acgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatagtataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgctgt 38486395  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||| |||||||     ||||||||||||| ||||||||||| |||| || || |||||||||| ||||||||||||    
T  38486396 tctgccttgtg-----ctgttctatcttgcactgttctgtctagtacttactgttttgcaaacgaaacacacccta 38486466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 52949767 - 52949602
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||| ||| |||||| |||||||| |||| ||||||||||    
T  52949767 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaa-ttattcaatgtcataaaaa-tttgtcctgtgctat 52949670  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| |||||| |||| ||||||| |||||||||||||||| | ||| ||||| |||||||||||||||    
T  52949669 tctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaac 52949602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 34929959 - 34929789
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||| |||| | |||||| ||||    
T  34929959 tacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaatttactgaatgccataaaaattttgtcatgtgctgttct 34929860  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
     |||||||||||||| || ||| |||||||||| |||| ||| ||| || |||||||||||||||| ||||    
T  34929859 gccttgtgttgtactattttattttgtactgttttgtctagtttttactgttttgcaaaccaaacataccc 34929789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 42870021 - 42869859
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttccc-ctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||| ||||||||||||||||||||||| ||||||  |||| | |||||||||||| ||||||||||||||||||||||||||||||     ||| |||    
T  42870021 acgtataagttgtctaaaatacaaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatt-----tgttcta 42869927  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |    |||| |||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||    
T  42869926 t----ccttatgttgtactgttctatcttgtactgttctgtcgagtacttgctgttttgcaaaccaaacaca 42869859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 50178532 - 50178699
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||| | |    
T  50178532 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgatgt 50178630  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaaca 170  Q
    ||| |||||| ||||  |||||| |||||||||||||||| | ||| ||||| ||||||||||||||||    
T  50178631 tctcccttgtattgtgatgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaaca 50178699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 33552881 - 33553003
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  33552881 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 33552980  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    | | |||||||||||||||||||    
T  33552981 tttgccttgtgttgtactgttct 33553003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 37695580 - 37695755
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||||||||||||  |||||| ||||| || |||| |||||||||||| ||||||||||| |||||||||| ||||||||| | |||||| |    
T  37695580 acgtacaggttgtctaaaatatcaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcttgtgctgt 37695678  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||| ||||  |||||| |||||||||||||||| ||||| ||| | |||||||||| |||| ||||||||    
T  37695679 tctcccttgtattgtgttgttctttcttgtactgttctgtacagtacttgttgttttgcaaactaaacgcaccctaa 37695755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 47642530 - 47642705
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||  |||||||| |    
T  47642530 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttatcctgtgctgt 47642628  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||| ||||  |||||| |||||||||||||||| |  || ||| | ||||||||||||||| ||||||||    
T  47642629 tctcccttgtattgtgttgttctttcttgtactgttctgtactatacttgttgttttgcaaaccaaacgcaccctaa 47642705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 2725171 - 2725281
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |    
T  2725171 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgt 2725270  T
Q  102 tctaccttgtg 112  Q
    ||| |||||||    
T  2725271 tctgccttgtg 2725281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 1231358 - 1231236
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| |||||| |||||  |||||||||||||||||  | |||||| |    
T  1231358 acgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaatcgtataaaacaaaatattacataatgccataaaaaatttatcttgtgctgt 1231259  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||||||||||||||||||||||    
T  1231258 tctaccttgtgttgtactgttct 1231236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 29616217 - 29616095
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  29616217 acgtacaaattgtctaaaataccaaaataacattttgtcccttaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgt 29616118  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||  ||||||||||||||||||    
T  29616117 tctgtcttgtgttgtactgttct 29616095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 36885979 - 36885819
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaatt-actcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||| |||||||||||||  ||||| |||||||| || | |||||||||||| |||||||||| |||||||||||||||||||||| ||           
T  36885979 acgtacaaattgtctaaaatacctaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattaactcaatgccataaaaaatttgtcc------- 36885887  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
            |||||||||||||||||||||||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  36885886 --------tgtgttgtactgttctatcttgtactgttctgtctagtactcgctgttttgcaaaccaaacacaccct 36885819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 47361452 - 47361570
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||| |||||| |||||||| ||   ||| |||||||| |||||||||||||||||  ||||||||||||| | |||||| ||||     
T  47361452 acaagttgtctaaaataccaaaatagcattttgtccctaaaaattcgtataaaacaaaaaattactcaatatcataaaaaatttgtcatgtgctgttctg 47361551  T
Q  106 ccttgtgttgtactgttct 124  Q
    |||||||||||||||||||    
T  47361552 ccttgtgttgtactgttct 47361570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 50727952 - 50728054
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |    
T  50727952 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgt 50728051  T
Q  102 tct 104  Q
    |||    
T  50728052 tct 50728054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 50735966 - 50736068
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| || ||||| |    
T  50735966 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgt 50736065  T
Q  102 tct 104  Q
    |||    
T  50736066 tct 50736068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 4325838 - 4325750
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttg 90  Q
    |||||||||||||||||||||| |||||| |||||||| |||| ||||||| |||| ||||||||||||||| ||||||||||||||||    
T  4325838 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcgcataaaacaaaaaattactcattgccataaaaaatttg 4325750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 44649205 - 44649373
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||  ||||||| |||||| |||  |||||||| | |||| | |||    
T  44649205 gtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaac--aaaattattcaatgtcat-caaaatttgtcatgtgttgttc 44649301  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | |||||| |||||||||||| |||||||||||||||| | ||| ||||  ||||||||| ||||| |||||    
T  44649302 tcccttgtattgtactgttctttcttgtactgttctgtactgtacttgccgttttgcaaatcaaacgcaccc 44649373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 23327965 - 23327850
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||| | |||| |||| |||||||| ||||||||||||||| |||||||||||||||| |||||  |     
T  23327965 acgtacaagttgtctaaaataccaaaataacattttatccccccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtaatg 23327866  T
Q  101 ttctaccttgtgttgt 116  Q
    |||||| |||||||||    
T  23327865 ttctactttgtgttgt 23327850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 7554996 - 7555169
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||  | |||||| ||||| |  | || |||||||||||| ||||||||||| |||||||||| ||||||||| | |||| | |    
T  7554996 acgtacaagttgtctaaaaatccaaaatagcatttcggcctccaaaaatcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcgtgtgatgt 7555094  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||  ||||||||||  |||| | ||||||||||||  ||||| || || || ||||||||||||||||||||||    
T  7555095 tctgtcttgtgttgtgttgttttgtcttgtactgttaagtccaatacttactattttgcaaaccaaacacaccct 7555169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 177
Target Start/End: Complemental strand, 29592936 - 29592773
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||||  | |||||  ||||| || |||| |||||| ||||| ||||||||||| ||||||||| |||||||||| | ||| || |||| ||    
T  29592936 aagttgtctaaaaatccaaaatggcatttcgtcccccaaaaatcatataaaacaaaaaattattcaatgcca-aaaaaatttgtcttgttctgttctgcc 29592838  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||||||||| ||||     ||||||||| | |||||||||||| || |||||||||||||||||||||||    
T  29592837 ttgtgttgttctgt-----cttgtactgatatgtccagtatttactgttttgcaaaccaaacacacccta 29592773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 24210366 - 24210250
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttccc-ctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| ||||||  |||| | |||||||||||| ||||||||||||||||| |||||||| ||||| | |||| |     
T  24210366 acgtacaagttgtctaaaataccaaaatagcatttttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgtgttg 24210267  T
Q  101 ttctaccttgtgttgta 117  Q
    |||| ||||||||||||    
T  24210266 ttctgccttgtgttgta 24210250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 38812567 - 38812483
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaa 86  Q
    |||||||||||||||||||||| |||||| ||||||||||| | |||||||||||| ||||||||||||||| || |||||||||    
T  38812567 acgtacaagttgtctaaaataccaaaatagcattttgttccgcaaaaatcgtataaaacaaaaaattactcattgtcataaaaaa 38812483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 2787011 - 2786838
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| || |||||||  | |||||| ||||| || |||| |||||| ||||| ||||||||||| ||||||| |||||||||| | |  ||||| |    
T  2787011 acgtacaaattatctaaaaatccaaaataacatttcgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaatt-gtctagtgctgt 2786913  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    | | |||| ||||||  |||||  |||||||||||| ||||||||| || || ||||||||||||||||||||||    
T  2786912 tttgccttatgttgtgttgttcggtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacaccct 2786838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 46680549 - 46680658
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| | |||| |||||||| ||   |||||| ||||| |||||||||||||||||||||||||||||||| ||||| || |    
T  46680549 acgtacaaattgtctaaaataccataatagcattttgtccctaaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgt 46680648  T
Q  102 tctaccttgt 111  Q
    |||| |||||    
T  46680649 tctatcttgt 46680658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 44324381 - 44324500
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| | |||||| |||||| ||||| || |||| |||||||||||| ||||||||||| |||||||||| ||||||||| | |||||| |    
T  44324381 acgtacaagttgttttaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcatgtgctgt 44324479  T
Q  102 tctaccttgtgttgtactgtt 122  Q
    ||| |||| |||||| |||||    
T  44324480 tctgccttatgttgtgctgtt 44324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 3649683 - 3649511
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| ||||| || |||| |||| | ||||| |||| |||||| ||||| |||| |||||||||   |||||| |    
T  3649683 acgtacaagttgtctaaaacaccaaaataacatttcgtcccccaaaaaacatataaaacaagaaattattcaataccat-aaaaatttgtgatgtgctgt 3649585  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | | ||||||||||| |||||||   || ||||||  ||||||||| || || ||||||||||||||| |||||    
T  3649584 tatgccttgtgttgtgctgttctgcattatactgtgttgtccagtacttactattttgcaaaccaaacgcaccc 3649511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 36497261 - 36497144
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||  |||||| |||| ||| || | |||||||||||| | ||||||||||||||||| |||||   |||| |||||| | ||||    
T  36497261 tacaagttgtctaaaatatcaaaatagcattctgtccctcaaaaatcgtataaaataaaaaattactcaatgctataaattttttgtcctgtgttgttct 36497162  T
Q  105 accttgtgttgtactgtt 122  Q
     |||||||||||||||||    
T  36497161 gccttgtgttgtactgtt 36497144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 30942829 - 30942670
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    ||||||||||||| || ||||||||||||  | |||| |||||| ||||| |||| |||||| ||||||| || ||||||||| | | ||||||| ||||    
T  30942829 aagttgtctaaaacaccaaaatatcatttcatcccccaaaaatcatataaaacaagaaattattcaatgctat-aaaaatttgtcatatgctattatacc 30942731  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaa 168  Q
    |||| ||||| ||||||   |||||||||| |||||| || || || |||| |||||||||    
T  30942730 ttgtattgtaatgttcttaattgtactgttttgtccaatacttactgttttacaaaccaaa 30942670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 172
Target Start/End: Complemental strand, 37931964 - 37931798
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| ||||||   |||||| ||||| || |||| ||||| |||||| || |||||||| ||||||||||||||| || | | |||||| ||||    
T  37931964 tacaagttgtttaaaatgtcaaaatagcatttcgtcccccaaaaattgtataaaacgaaaaattattcaatgccataaaaagtt-gtcttgtgctgttct 37931866  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
     |||||| || |  | || | |||||||||||| ||||||||| || || ||||||||||||||||||    
T  37931865 gccttgtattatgttattatgtcttgtactgttatgtccagtacttactgttttgcaaaccaaacaca 37931798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 46680641 - 46680700
Alignment:
Q  114 tgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||    
T  46680641 tgtactgttctatcttgtactgttctgtccagtacttactattttgcaaaccaaacacac 46680700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 116
Target Start/End: Complemental strand, 32181310 - 32181197
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| || |||| ||||| |||||| ||| ||||||| |||||| ||| | ||||||| |||||||| |    
T  32181310 acgtacaagttgtctaaaataccaaaatagcatttcgtcccccaaaaatagtataaaacataaaattattcaatgtcat-acaaatttgtcctgtgctgt 32181212  T
Q  102 tctaccttgtgttgt 116  Q
    |||| ||||| ||||    
T  32181211 tctatcttgtattgt 32181197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 50186572 - 50186411
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||||||||||||||||||| ||||| |  |||| |||||||||||| | ||||||||| |||||| |||||||| |||| ||| || | || |    
T  50186572 tacaagttgtctaaaatacaaaaatagcatttcgcaccccaaaaatcgtataaaataaaaaattattcaatgtcataaaaa-tttgtcctatgttgttat 50186474  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaa 167  Q
      ||| |||||| || || | |||| |||||||| ||| |||| || || |||||||||||||    
T  50186473 gtcttatgttgtgctattttgtcttatactgttcagtcaagtacttactgttttgcaaaccaa 50186411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 53343560 - 53343638
Alignment:
Q  46 aaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||||||||| ||||||||||| |||||||||||||||||||| | |||| | |||| | |||||||||||||||||    
T  53343560 aaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttctgcattgtgttgtactgttct 53343638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 22318422 - 22318589
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||| ||||||||||||| || |||||| ||||||||   || |||||| ||||| |||| |||||| |||||  |||||||| |||| | |||| |     
T  22318422 tacgtagaagttgtctaaaacaccaaaataacattttgtcatccaaaaatcatataaaacaagaaattattcaatatcataaaaa-tttgtcatgtgttg 22318520  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    || |  |||||||||| |||||||   ||||||| |||||||||||| || || |||||||||||||||    
T  22318521 ttatgtcttgtgttgtgctgttctgcattgtactcttctgtccagtacttactgttttgcaaaccaaac 22318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 150
Target Start/End: Complemental strand, 7001893 - 7001754
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||| ||| |||||| ||||| || | || |||||||||||| || |||||||| ||||||||||| |||||||| |||||  | ||||  |    
T  7001893 aagttgtctaaa-taccaaaataacattt-gtccaccaaaaatcgtataagaccaaaaattattcaatgccata-aaaatttgtcctgtattgttctgtc 7001797  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtattt 150  Q
    |||||||||  |||||| ||||||||| || ||||||||||||    
T  7001796 ttgtgttgtgatgttctgtcttgtactattttgtccagtattt 7001754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 42772805 - 42772719
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatt 88  Q
    ||||| ||||| |||||||||| |||||| |||||| | | || |||||| ||||| ||||||||||||||||||||||||| ||||    
T  42772805 acgtataagttatctaaaataccaaaataacattttttcctccaaaaatcatataaaacaaaaaattactcaatgccataaataatt 42772719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 33552992 - 33553045
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagag 181  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||||||||    
T  33552992 ttgtactgttctgtccagtacttgctgttttgcaaaccaaacacatcctaagag 33553045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 11056080 - 11055977
Alignment:
Q  11 ttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttg 110  Q
    ||||| ||||||| |||||| ||||| || || | |||||||||||| ||||||||||| |||||||||| ||| ||||| || || || ||||||||||    
T  11056080 ttgtcaaaaataccaaaataacatttcgtgcctcaaaaatcgtataaaacaaaaaattattcaatgccat-aaagatttgtcccgtactgttctaccttg 11055982  T
Q  111 tgttg 115  Q
    |||||    
T  11055981 tgttg 11055977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 41711894 - 41711811
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||||| |||||||||||||| |||||| ||||| || |||| || ||||||||| ||||||||||| |||||  ||||||||    
T  41711894 acgtacaggttgtctaaaataccaaaatagcatttcgtcccccaaatatcgtataaaacaaaaaattattcaatagcataaaaa 41711811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 56487292 - 56487375
Alignment:
Q  3 cgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaa 86  Q
    |||||||||||| |||||||| |||||| |||||||| | || |||||| ||||| ||||||||| | |||||| |||||||||    
T  56487292 cgtacaagttgtttaaaataccaaaataacattttgtcctccaaaaatcatataaaacaaaaaatcaatcaatgacataaaaaa 56487375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 38520498 - 38520438
Alignment:
Q  115 gtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| |||||||||||||| || | | | |||||||||||||||||||||    
T  38520498 gtactgttctatcttatactgttctgtccaatactagttgttttgcaaaccaaacacaccc 38520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 39078709 - 39078625
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||||| |||||||||||| || |||||| |||||||| |||| |||||| ||||| | || |||||| ||||| |||||||||    
T  39078709 tacgtacgagttgtctaaaacaccaaaataacattttgtcccccaaaaatcatataaaataagaaattattcaataccataaaaa 39078625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 32181215 - 32181161
Alignment:
Q  118 ctgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||||||||||||||| |||||| ||||||| || || ||||||||||||||||||    
T  32181215 ctgttctatcttgtattgttctatccagtacttactgttttgcaaaccaaacaca 32181161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 52949599 - 52949517
Alignment:
Q  95 gtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||||||||| |||||| |||| ||||||| ||||||||  ||||||   ||| ||||| ||||||||||||||| |||||||    
T  52949599 gtgctattctcccttgtattgtgctgttctttcttgtaccattctgtattgtacttgctgttttgcaaaccaaacgcacccta 52949517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 2725288 - 2725329
Alignment:
Q  134 tgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  2725288 tgttctgtccagtacttgctgttttgcaaaccaaacacaccc 2725329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 13110374 - 13110207
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| || ||||||||||  | |||||| ||||| || |||| |||||| || || ||||||| |||  |||||||||||||| ||||  ||| | | |    
T  13110374 acgtaaaatttgtctaaaaatccaaaatagcatttcgtcccccaaaaatcatacaaaacaaaaa-ttatgcaatgccataaaaa-tttgttctgcgttgt 13110277  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    ||||||||||| | |  |||||||||||||| |||| | |||| || || || |||||||||||||||||    
T  13110276 tctaccttgtgctatgttgttctatcttgtattgttttatccactacttactgttttgcaaaccaaacac 13110207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 175
Target Start/End: Original strand, 50729644 - 50729737
Alignment:
Q  82 aaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||  ||||||| || | ||||||||||| |||||||   || |||||| | ||||||||||| || ||||||||||||||| |||||    
T  50729644 aaaaatttgttctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgccgtccagtatttactattttgcaaaccaaacgcaccc 50729737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 16320566 - 16320402
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||| ||||||||||||||||  ||||  | |||| ||| |||||||| ||  ||||||| |||||||||| ||||||||| | |||| | |    
T  16320566 acgtacaggttgcctaaaatacaaaaatagaatttcatcccccaaaactcgtataaaac--aaaattattcaatgccat-aaaaatttgtcttgtgttgt 16320470  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| |||| | ||||  |||||| ||||||| || | | | ||||| ||||| ||||||||| |||||    
T  16320469 tctcccttctattgtgttgttctttcttgtattgctttatacagtacttgctgttttgcaaatcaaac 16320402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 41711794 - 41711747
Alignment:
Q  126 tcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||| ||||| || ||||||||| |||||||||    
T  41711794 tcttgtactgttctgtccattatttactattttgcaaatcaaacacac 41711747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 38812470 - 38812416
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    |||||| || ||||||||| ||||| ||| ||||| |||||||||||||||||||    
T  38812470 tgttctgtcgtgtactgttttgtccggtacttgctgttttgcaaaccaaacacac 38812416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 20644282 - 20644362
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaa 84  Q
    ||||||||| ||||| |||||||||||   |||||| | || |||||||||||| |  |||||||| ||||||| ||||||    
T  20644282 gtacaagttatctaagatacaaaaatagatttttgtacaccaaaaatcgtataaaatcaaaaattattcaatgcgataaaa 20644362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 32081124 - 32081080
Alignment:
Q  83 aaaatttgacctgtgctattctaccttgtgttgtactgttctatc 127  Q
    |||||||| | |||||| ||||||||| |||||||||||||||||    
T  32081124 aaaatttgtcttgtgctgttctaccttatgttgtactgttctatc 32081080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 28675835 - 28675658
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  28675835 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 28675736  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||  | |||||||||||||||||||||||||    
T  28675735 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttattgttttgcaaaccaaacacaccctaag 28675658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 181
Target Start/End: Original strand, 4851496 - 4851675
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||  | |    
T  4851496 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtcttgt 4851595  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagag 181  Q
    ||| |||||||||||||||||||||||||||||||| ||||| ||| ||||| |||||||||||||||||||||| ||||    
T  4851596 tctgccttgtgttgtactgttctatcttgtactgttttgtccggtacttgctgttttgcaaaccaaacacacccttagag 4851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 12349211 - 12349376
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  12349211 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 12349310  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaa 167  Q
    ||| |||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||    
T  12349311 tctgccttgtgttgtactgttctatcttgtactgttatgtccaatacttgctcttttgcaaaccaa 12349376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 183
Target Start/End: Original strand, 51259820 - 51260001
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| ||   |||||| ||||| ||||||||||||||||||||||||||| |||| | |||||| |    
T  51259820 acgtacaagttgtctaaaataccaaaataacattttgtcccttaaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcttgtgctgt 51259919  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagtt 183  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||||||||    
T  51259920 tctgccttgtgttgtactgttctatcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccctaagagtt 51260001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 1344747 - 1344921
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||| ||| | |||| | |    
T  1344747 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcatgtgatgt 1344846  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||  ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  1344847 tctgtcttgtgttgtactgttctatcttgtactgttttgtccagtacttgctattttgcaaaccaaacacaccct 1344921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 26282427 - 26282599
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| |||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||||| |    
T  26282427 acgtataagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgt 26282526  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  ||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  26282527 tctgtcttgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 26282599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 180
Target Start/End: Original strand, 39052878 - 39053057
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaa-tttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| |||| |||||||||||||| |||||||| |||| | |||| |     
T  39052878 acgtacaagttgtctaaaataccaaaataacattttgtcccccaaaaatcgtataaaacaacaaattactcaatgctataaaaaaatttgtcatgtgttg 39052977  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  39052978 ttctatcttgtgttgtactgttctatcttgtactgttctgttcagcatttactattttgcaaaccaaacacaccctaaga 39053057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 21221400 - 21221570
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  21221400 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgt 21221499  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| |||| |||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||    
T  21221500 tctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgctgtattgcaaaccaaacaca 21221570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 53557835 - 53558011
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  53557835 acgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 53557934  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| ||||||||||||||||| || |||||| ||||||||| |||| || || ||||||||||||||||||||||||    
T  53557935 tctgccttgtgttgtactgttataccttgtattgttctgtcaagtacttactgttttgcaaaccaaacacaccctaa 53558011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 29584920 - 29584749
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | |||||||||||| | ||||||||||||||||| ||||||||||||  |||| || |    
T  29584920 acgtacaagttgtctaaaataccaaaatagcattttgtccttcaaaaatcgtataaaataaaaaattactcaatgcaataaaaaatttgttctgtactgt 29584821  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  29584820 tctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 29584749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 47958472 - 47958643
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| |||||||||||||  || |||| |    
T  47958472 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgacataaaaaatttgttctatgctgt 47958571  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||||||||||||||    
T  47958572 tctgccttgtattgtagtgttctatcttgtattgttctgtccagtacttgctgttttgcaaaccaaacacac 47958643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 3864715 - 3864883
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  3864715 acgtacaagttgtctaaaataccaaaatagcattttgt-ccccaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 3864813  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    | | | || ||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||||||    
T  3864814 tatgcgttatgttgtaatgttctatcttgtactgttctgtgcagtacttactgttttgcaaaccaaacac 3864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 25927367 - 25927536
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||| | |||||| |    
T  25927367 acgtacaagttgtctaaaataccaaaataacattttgttcctcaaaaatcgtataaaacaaaaaatcactcaatgccataaaaaatttgtcttgtgctgt 25927466  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgct-cttttgcaaaccaaaca 170  Q
    |||||||||| ||||||||||||||||| ||||||| ||||| ||| ||| |  ||||||||||||||||    
T  25927467 tctaccttgtattgtactgttctatcttatactgttttgtccggtacttgttgtttttgcaaaccaaaca 25927536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 2135115 - 2134944
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| || |||||||||| |||||| || ||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  2135115 acgtacaaattatctaaaataccaaaatagcactttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgt 2135016  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||  |||||||| |||| ||||| |||||||||||||||||||    
T  2135015 tctgccttgtgttgtactgttctatcttgtaacgttctgtctagtacttgctgttttgcaaaccaaacacac 2134944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 25860461 - 25860632
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||  ||||| |||||||||| || |||||||||||| ||||||||||||||| |||||||||||||||| |||||| | |    
T  25860461 acgtacaagttgtctaaaataccgaaatagcattttgttctccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttgt 25860560  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | | |||| |||||| |||||||||||||||||||||||||||||  || |  |||||||||||||||||||    
T  25860561 tatgccttttgttgtgctgttctatcttgtactgttctgtccagtgcttaccgttttgcaaaccaaacacac 25860632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 5442336 - 5442162
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||| |||||||||||  |||||| |||||| | || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||| | |    
T  5442336 acgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgt 5442237  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    | |||||||| |||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  5442236 tataccttgtattgtactgttctaaattgtactgttctgtccagtacttgctattttgcaaaccaaacacaccct 5442162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 171
Target Start/End: Original strand, 53046692 - 53046850
Alignment:
Q  13 gtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtg 112  Q
    ||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||  ||||| | |||| |||||||    
T  53046692 gtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttctgtgttgttctgccttgtg 53046791  T
Q  113 ttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    |||||||||||||||||||| |||||||| ||||| ||| | |||||||||||||||||    
T  53046792 ttgtactgttctatcttgtattgttctgttcagtacttgttgttttgcaaaccaaacac 53046850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 181
Target Start/End: Complemental strand, 24571324 - 24571148
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||||||||||  ||||||| |||| ||||||| |||| |||| ||||||||||||||||||||||||||| | ||| || |||    
T  24571324 gtacaagttgtctaaaatacaaaaataggattttgtcccccaaaaatcgaataaaacaacaaattactcaatgccataaaaaatttgtcatgtactgttc 24571225  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagag 181  Q
    | |||| ||||||| ||||||||||| || || ||||||||||| || || |||| ||||||||||||||||||||||    
T  24571224 tgccttatgttgtattgttctatcttatagtg-tctgtccagtacttactgttttacaaaccaaacacaccctaagag 24571148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 31883062 - 31883234
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| |||||| | |    
T  31883062 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgtgttgt 31883160  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||| |||| ||||||| |||||||||||||||| | ||| ||||| |||||||||||||||||||||    
T  31883161 tctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctattttgcaaaccaaacacaccc 31883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 44116984 - 44116859
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  44116984 acgtacaagttgtctaaaatacaaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 44116885  T
Q  102 tctaccttgtgttgtactgttctatc 127  Q
    |||  |||||||||||||||||||||    
T  44116884 tctgacttgtgttgtactgttctatc 44116859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 38213399 - 38213227
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||||||||||||||| |||||||||||||||| | |||||| |    
T  38213399 acgtacaagttgtctaaaataccaaaataccattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgt 38213300  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||  |||| |  |||| | |||||||||||||||| || || || || ||||||||||||||||||||    
T  38213299 tctgcctaatgttatgttgttttgtcttgtactgttctgtacaatacttactgttttgcaaaccaaacacacc 38213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 34026712 - 34026590
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |    
T  34026712 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgt 34026613  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  34026612 tctgccttgtgttgtactgttct 34026590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 50386495 - 50386670
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||  |||||| ||||||||||||| ||||| |||||| ||||||||||| ||||||  || ||||||||| ||||||||     
T  50386495 tacgtacaagttgtctaaaatatcaaaatagcattttgttccccaaaaattgtataaaacaaaaaattattcaatgtgat-aaaaatttgtcctgtgctg 50386593  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||| |||||| |||| ||||||| | |||||||||||||| | ||| ||||| ||||||||||||||  |||||||    
T  50386594 ttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgctgttttgcaaaccaaatgcacccta 50386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 43175584 - 43175441
Alignment:
Q  32 cattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgt 131  Q
    |||||||| || | |||||||||||| ||||||||||||||||| |||||||||||||  | |||||| ||||  ||||| || ||||||||||||||||    
T  43175584 cattttgtccctcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttatcgtgtgctgttctgtcttgtattatactgttctatcttgt 43175485  T
Q  132 actgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||    
T  43175484 actgttttgtccagtacttgctgttttgcaaaccaaacacaccc 43175441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 20609688 - 20609810
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||  |||||||||||||||||| ||||||||||||| |||||||| |    
T  20609688 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtatataacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgt 20609787  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  20609788 tctgccttgtgttgtactgttct 20609810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 139
Target Start/End: Complemental strand, 40094548 - 40094411
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| || | ||||||| |||| ||||||||||||||||||||||||||| |||| | |||| | |    
T  40094548 acgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgcataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgt 40094449  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttct 139  Q
    ||| |||||||||||| |||||||||||||||||||||    
T  40094448 tctgccttgtgttgtattgttctatcttgtactgttct 40094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 42636443 - 42636575
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||| ||| ||||||||||||| |||||||||||||||||| |||||||| |    
T  42636443 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtttaaaacaaaaaattacttaatgccataaaaaatttgtcctgtgctgt 42636542  T
Q  102 tctaccttgtgttgtactgttctatcttgtact 134  Q
    ||| |||||||||||||| |||| ||| |||||    
T  42636543 tctgccttgtgttgtactattctgtctagtact 42636575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 22484783 - 22484954
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||||||||||||| ||||| ||  ||| |||||  ||||||||| ||||||| ||||| ||||||||| |||| | |||||| |    
T  22484783 acgtataagttgtctaaaatacaaaaatagcatttcgtcacccaaaaattatataatacagaaaattattcaataccataaaaa-tttgtcttgtgctgt 22484881  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||||||| ||||||  ||| ||||||| ||||||| ||||||||| || || ||||||||||||||||||||    
T  22484882 tctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacacc 22484954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 33364818 - 33364991
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||||||||| |||| | | |    
T  33364818 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctgggttgt 33364916  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||  ||||| |||| || |||| |||||||||||| ||| | ||| ||||| ||||||||||||||| ||||||    
T  33364917 tctctcttgtattgtgctattctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcaccct 33364991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 51925248 - 51925421
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| |  ||||| |||||| ||||| || |||| |||||||||||| ||||||||||| |||||||||| ||||||||| | |||||| |    
T  51925248 acgtacaagttgtttttaataccaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcatgtgctgt 51925346  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| ||||||||||| ||||| | |||||||||||| | ||||||| || |  ||||||||||||||| ||||||    
T  51925347 tctgccttgtgttgtgctgttatgtcttgtactgttatatccagtacttaccgttttgcaaaccaaacgcaccct 51925421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 10747263 - 10747089
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||| |||||||| ||||||||||| |||||| |||||||| |||| | ||||||     
T  10747263 acgtacaagttgtctaaaatatcaaaatagcattttgtccccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa-tttgtcttgtgctg 10747165  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| |||||| ||||  |||||| |||||||||||| | | | ||| ||||| ||||||||||||||| ||||||    
T  10747164 ttctcccttgtattgtgttgttctttcttgtactgttttatactgtacttgctgttttgcaaaccaaacgcaccct 10747089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 29646111 - 29645943
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatac-aaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||| |||||||| |||||| |||||||| |||| |||||||||||| || ||||||||| | |||||||| ||||||||| | |||| |     
T  29646111 acgtacaagttgtttaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaaattatttaatgccat-aaaaatttgtcttgtgatg 29646013  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaaca 170  Q
    || |||||| ||||||  |||| | ||||||| ||||||||||| || ||| | ||||||||||||||||    
T  29646012 ttataccttatgttgtgttgttttgtcttgtattgttctgtccaatacttgttattttgcaaaccaaaca 29645943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 54622836 - 54623001
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| || |||| |||||||||||| ||||||||||| |||||||||||||||| ||| || |||   |    
T  54622836 acgtacaagttgtctaaaataccaaaatagcatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatgccataaaaaa-ttgtcccgtg---t 54622931  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    ||| ||||||||| |  |||| |||||||||   ||||||| ||||||| ||  ||| ||||||||||||    
T  54622932 tctgccttgtgttctgttgttttatcttgtaggattctgtcaagtatttactgattttcaaaccaaacac 54623001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 3695332 - 3695449
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||| | |||| ||||| |||||| |||| ||||||||||||||||||||||||||| ||||     |    
T  3695332 acgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaattgtataaaacaacaaattactcaatgccataaaaaatttgtcctg-----t 3695426  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  3695427 tctgccttgtgttgtactgttct 3695449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 20255087 - 20255002
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttg 90  Q
    ||||||||||||||||||| |||||| |||||||| || | |||||| ||||| ||||||||||||||||||||||||||||||||    
T  20255087 tacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcttataaaacaaaaaattactcaatgccataaaaaatttg 20255002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 51296624 - 51296544
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaa 84  Q
    ||||||||||||||||||||||||||| |||||||| |||  |||||||||||| ||||||||||||||||| ||||||||    
T  51296624 gtacaagttgtctaaaatacaaaaatagcattttgtccccaaaaaatcgtataaaacaaaaaattactcaataccataaaa 51296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 21373975 - 21373812
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||  |   || |||||||||||| | ||||| ||| ||||||||||||||| |||| ||||||        
T  21373975 acgtacaagttgtctaaaataccaaaatagcatttcttcggccaaaaatcgtataaaataaaaa-ttattcaatgccataaaaa-tttgtcctgtgt--- 21373881  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
         |||||||||| ||||||| ||||||| ||||||||||| || || || |||||||||||||||||||||    
T  21373880 -----cttgtgttgtgctgttctgtcttgtattgttctgtccaatacttactgttttgcaaaccaaacacaccc 21373812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 41694944 - 41695024
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||||||||||||  ||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||||||||    
T  41694944 tacaagttgtctaaaatactgaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa 41695024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 45690947 - 45691112
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    |||||||||||||||| |||||  ||||| || | || |||||||||||| ||||||| ||| ||||||| ||||||| |||| | |||| ||||||| |    
T  45690947 aagttgtctaaaataccaaaatcgcatttcgtcctccaaaaatcgtataaaacaaaaa-ttattcaatgctataaaaa-tttgtcatgtgttattctatc 45691044  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    || | ||||  |||||| |||||||||||||| ||||||| ||  | ||||| ||| |||||||||||    
T  45691045 ttatattgtgttgttctgtcttgtactgttctatccagtacttagtgttttgtaaatcaaacacaccc 45691112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 3964331 - 3964167
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| ||||| | ||||| |||||| ||||| ||| ||||||| |||||  |||| |||||||| | |||||| |||    
T  3964331 gtacaagttgtctaaaataccaaaatagcatttcg-tccccaaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgctgttc 3964233  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    | |||||| ||||  |||  | |||||| ||||||| || |||| || || ||||||||| |||||    
T  3964232 tgccttgtattgtgttgtgttgtcttgtgctgttctatcaagtacttactgttttgcaaatcaaac 3964167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 3867688 - 3867772
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||||| ||||||| || |||||| |||||||| |||| |||||| ||||| |||| |||||| ||||| |||||||||    
T  3867688 tacgtacaagttttctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccataaaaa 3867772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 49748951 - 49749025
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatg 76  Q
    ||||||||||||| | |||||| |||||| ||||| || |||| |||||||||||| ||||||||||| ||||||    
T  49748951 acgtacaagttgttttaaataccaaaataacatttcgtcccccaaaaatcgtataaaacaaaaaattattcaatg 49749025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 176
Target Start/End: Complemental strand, 20254994 - 20254946
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||    
T  20254994 ttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccct 20254946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 25395653 - 25395577
Alignment:
Q  8 aagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaa 84  Q
    |||||||||||||||| |||||| |||||||||| |  |||||||||||| ||||||||| |  ||||| |||||||    
T  25395653 aagttgtctaaaataccaaaataacattttgttcactaaaaatcgtataaaacaaaaaataatgcaatgtcataaaa 25395577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 20609799 - 20609846
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || || |||||||||||||||||||||    
T  20609799 ttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccc 20609846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 44000306 - 44000224
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaa 84  Q
    ||||||||||| ||| |||||||||||||   |||||| | || |||||||||||| || |||||||| ||||| ||||||||    
T  44000306 acgtacaagttatctgaaatacaaaaatagttttttgtccaccaaaaatcgtataagaccaaaaattattcaataccataaaa 44000224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 85
Target Start/End: Complemental strand, 6179467 - 6179394
Alignment:
Q  12 tgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||||||||||||||||| ||||| ||  ||  |||||| ||||||| | ||||||| ||||| |||||||||    
T  6179467 tgtctaaaatacaaaaataacatttcgtcaccaaaaaatcatataataaagaaaattattcaataccataaaaa 6179394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 39215509 - 39215546
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgt 39  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  39215509 acgtacaagttgtctaaaataccaaaataacattttgt 39215546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 102
Target Start/End: Complemental strand, 44267784 - 44267688
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctatt 102  Q
    ||||| |||||||||||||||||||| ||||| ||   || |||||| ||||| ||||||||||| | ||| | || ||||||||| | |||||||||    
T  44267784 tacaaattgtctaaaatacaaaaatagcatttcgtcatccaaaaatcatataaaacaaaaaattattgaatacgat-aaaaatttgtcttgtgctatt 44267688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 10932604 - 10932778
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||| |||| |    
T  10932604 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgt 10932703  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| || ||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  10932704 tctgccgtgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccct 10932778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 36769616 - 36769790
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||  | | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  36769616 acgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 36769715  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  36769716 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccct 36769790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 3922750 - 3922923
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| |||||||| || | |||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |    
T  3922750 acgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaatactcaatgccataaaaaatttgtcctgtgctgt 3922849  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  3922850 tctgccttgtgttgtactggtctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccc 3922923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 18470732 - 18470563
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||| ||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  18470732 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 18470633  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  18470632 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacac 18470563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 26994272 - 26994444
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  26994272 acgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 26994371  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||    
T  26994372 tctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttctgttttgcaaaccaaacacacc 26994444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 47947808 - 47947636
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  47947808 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 47947709  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  47947708 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcagagcaaacacacc 47947636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 47953238 - 47953066
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  47953238 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgt 47953139  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||||    
T  47953138 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcagagcaaacacacc 47953066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 32873816 - 32873987
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||| |||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  32873816 acgtacaagttgtctgaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgt 32873915  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  32873916 tctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacac 32873987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 179
Target Start/End: Complemental strand, 46633745 - 46633568
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | |||| | |    
T  46633745 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgt 46633646  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    ||| ||||||||||||||||||||||||||||| || |||||| || ||||| |||||||||||||||||||||||||    
T  46633645 tctgccttgtgttgtactgttctatcttgtactattatgtccaatacttgctgttttgcaaaccaaacacaccctaag 46633568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 11321932 - 11322105
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| | ||| || |    
T  11321932 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgt 11322031  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||||||||||||||||||||||||||||||||||  || || || |||||||||||||||||||||    
T  11322032 tctgccttgtgttgtactgttctatcttgtactgttctgtccgatacttactgttttgcaaaccaaacacaccc 11322105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 3892072 - 3892249
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||| ||||| |||||| ||||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||| | | ||||     
T  3892072 tacgtacaagttgtctagaataccaaaatagcattttgttcctcaaaaatcgtgtaaaacaaaaaattactcaatgccataaaaaatttgtcatatgctg 3892171  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| |||| ||||    
T  3892172 ttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactgttttgcaaaccaaatacactctaa 3892249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 5 - 173
Target Start/End: Original strand, 30849296 - 30849464
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||| |||||||| |||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||| ||| |||||| | ||||    
T  30849296 tacaagttgtataaaataccaaaataacattttgtcccccaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgttgttct 30849395  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
      |||||||||||||||||||||||||||||||||||| |||| || || |||||||||||||||||||    
T  30849396 gtcttgtgttgtactgttctatcttgtactgttctgtcaagtacttactgttttgcaaaccaaacacac 30849464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 21784919 - 21784749
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| | || |||||||||||| ||| |||||||||||||||||||||| |||||  ||||| | |    
T  21784919 acgtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacataaaattactcaatgccataaaagatttgttctgtgttgt 21784820  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| |||||||||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||    
T  21784819 tctgccttgtgttgtactgttctatcttgtactgttttgtccagtacttactgttttgcaaaccaaacaca 21784749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 41211247 - 41211417
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||||||||| |||||| ||||||  ||||  |||| |||||||| |||||||||||||||||||||||||||||||| ||| || |     
T  41211247 acgtacaagttgtctaaaataccaaaatagcatttttatccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttg 41211346  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    |||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  41211347 ttctgccttgtgttgtattgttctatcttgtactgttttgtccagtacttgctgttttgcaaaccaaacac 41211417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 43158733 - 43158903
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| |  |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||||| || |    
T  43158733 acgtacaagttgtctaaaacatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgt 43158832  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    |||  ||||||||||||||||||||||||||||| ||| || |||| ||||| ||||||||||||||||||    
T  43158833 tctgtcttgtgttgtactgttctatcttgtactgctctatctagtacttgctgttttgcaaaccaaacaca 43158903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 18386573 - 18386399
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| | |||| | |    
T  18386573 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgttgt 18386474  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||| |||||||| |||||| ||| |||||| || ||||| ||||||||||||||| ||||||    
T  18386473 tctgccttgtgttgtattgttctattttgtaccgttttgtccaatacttgctgttttgcaaaccaaactcaccct 18386399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 30599057 - 30599231
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||| || |||||||||| |||||| |||||||| |||  |||||||||||| |||| ||||||||||||  ||||||||||||| | |||| | |||    
T  30599057 gtacaaattatctaaaataccaaaataacattttgtcccctaaaaatcgtataaaacaacaaattactcaatttcataaaaaatttgtcatgtgttgttc 30599156  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    | |||||||||||||||||||||||||||||||||||||||||| || || ||||| ||||||||||||||||||    
T  30599157 tgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgtaaaccaaacacaccctaa 30599231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 12982301 - 12982178
Alignment:
Q  52 gtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttg 151  Q
    |||||| ||||||||||||||||||||||||||| |||| | |||||| |||| |||||||||||||||||||||||||||||||||| ||||||| |||    
T  12982301 gtataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtacttg 12982202  T
Q  152 ctcttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||||||||||||    
T  12982201 ctcttttgcaaaccaaacacaccc 12982178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 43189289 - 43189464
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaa-tcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    |||||||||||||||| ||||| ||||||  ||||||| |||| |||| |||||| | |||| ||||||||||||||||||||||||||| | ||  |||    
T  43189289 acgtacaagttgtctagaataccaaaatagtattttgtccccccaaaaatcgtatgaaacaacaaattactcaatgccataaaaaatttgtcatgcacta 43189388  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||| || || ||||||||||||||||||||||    
T  43189389 ttctgccttgtgttgtactgttctatcttatactgttatgtccagtacttactgttttgcaaaccaaacacaccct 43189464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 1870183 - 1870011
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccct---aaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgc 98  Q
    |||||||||||||||||||||  |||||| ||||||||  ||||   |||||||||||| |||||||||||||||||| ||||||||||||  | |||||    
T  1870183 acgtacaagttgtctaaaatatcaaaataacattttgt--ccctaaaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcatgtgc 1870086  T
Q  99 tattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | |||| ||||||||||||||||||||| |||||||||| ||| |||||  |||| |||||||||||||||||||    
T  1870085 tgttctgccttgtgttgtactgttctatattgtactgttatgtacagtacatgctgttttgcaaaccaaacacac 1870011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 9913573 - 9913398
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||||||||||||| |||||| ||||| || |||| |||||||||||| || |||||||| ||||| ||||||||| |||| | |||| | |    
T  9913573 acgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccataaaaa-tttgtcatgtggtgt 9913475  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||| ||||  |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  9913474 tctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaaacacaccctaa 9913398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 9927261 - 9927086
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||||||||||||| |||||| ||||| || |||| |||||||||||| || |||||||| ||||| ||||||||| |||| | |||| | |    
T  9927261 acgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaatcgtataaaactaaaaattattcaattccataaaaa-tttgtcatgtggtgt 9927163  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||||| ||||  |||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  9927162 tctcccttgtattgtgttgttctttcttgtactgttctgtacagtatttgctgttttgcaaaccaaacacaccctaa 9927086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 43368250 - 43368073
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgcta 100  Q
    ||||||||||||||||||||||  |||||| |||||||| || | |||||||||||| ||||||||||| ||||||  ||||||| |||| | ||||||     
T  43368250 tacgtacaagttgtctaaaatatcaaaatagcattttgtccctccaaaatcgtataaaacaaaaaattattcaatgtgataaaaa-tttgtcatgtgctg 43368152  T
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaag 179  Q
    |||| |||||| |||| ||||||| |||||||||||||||| | ||| ||||| ||||||||||||||| |||||||||    
T  43368151 ttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttgcaaaccaaacgcaccctaag 43368073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 26371856 - 26372001
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| | |||| | |    
T  26371856 acgtacaagttgtctaaaatactaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgatgt 26371955  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    |||   || ||||||||||||||||||||||||||| |||||||||    
T  26371956 tctgttttatgttgtactgttctatcttgtactgttatgtccagta 26372001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 40753203 - 40753081
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  40753203 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 40753104  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| | |||||||||||||||||    
T  40753103 tctgctttgtgttgtactgttct 40753081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 46408934 - 46408771
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||  |||||| ||| ||||  | | |||||||||||| | ||||||||||||||||||||||||||| |||       | ||||    
T  46408934 tacaagttgtctaaaatatcaaaatagcatattgtctctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatgtga-------tgttct 46408842  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
     |||||||||||||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||    
T  46408841 gccttgtgttgtactgttctatcttgtactgttctatccaatacttgctgttttgcaaaccaaacacaccc 46408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 175
Target Start/End: Original strand, 34295451 - 34295623
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||| ||||| ||||||||||| |||||| ||| ||||||||| | |||||| |    
T  34295451 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcatataaaacaaaaaattattcaatgtcat-aaaaatttgtcttgtgctgt 34295549  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||| ||||  |||||| |||||||||||| ||| | ||| ||||| ||||||||||||||| |||||    
T  34295550 tctcccttgtattgtgttgttctttcttgtactgttttgtactgtacttgctgttttgcaaaccaaacgcaccc 34295623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 25 - 176
Target Start/End: Complemental strand, 48894742 - 48894592
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| |||||||| |||| |||||| ||||| ||||||||||| ||||||| |||||||||| | || ||||| || ||||||||||||||||||||     
T  48894742 aaaataacattttgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaatt-gtccagtgctgttttaccttgtgttgtactgttcg 48894644  T
Q  125 atcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     |||||||||||| |||| | ||||| || ||||||||||||||||||||||    
T  48894643 gtcttgtactgttatgtcaaatatttactgttttgcaaaccaaacacaccct 48894592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 23349341 - 23349510
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||  ||||| || |||| | ||||||| || ||||||||||| ||||||  ||||||| |||| | |||||| ||||    
T  23349341 tacaagttgtctaaaatactaaaatgacatttcgtcccccaacaatcgtagaaaacaaaaaattattcaatgttataaaaa-tttgtcatgtgctgttct 23349439  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||||| ||||||  ||||||||||||||||||| |||||| || || || |||||||||||||||||||||    
T  23349440 accttatgttgttttgttctatcttgtactgttatgtccattacttactattttgcaaaccaaacacaccc 23349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 47316750 - 47316901
Alignment:
Q  7 caagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctac 106  Q
    ||||||||||||| ||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||||                    
T  47316750 caagttgtctaaattaccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttg---------------t 47316834  T
Q  107 cttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||||||||||    
T  47316835 cttgtgttgtactgttctatcttgtaccgttctgtccagtacttactgttttgcaaaccaaacacac 47316901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 29661371 - 29661249
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||| |||||||||||| | |||| | |    
T  29661371 acgtacaagttatctaaaataccaaaatagcattttgtcccacaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgttgt 29661272  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||| ||||    
T  29661271 tctgccttgtgttgtactattct 29661249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 44748743 - 44748655
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttg 90  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| ||||||||||||||| ||||||||||||||||    
T  44748743 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttg 44748655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 329518 - 329352
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||| |||||| || |||||| |||||||| |||| |||||| ||||| |||| |||||| ||||| |||| ||||||||| | ||| || |    
T  329518 acgtacaagttgcctaaaacaccaaaatagcattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtactgt 329420  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    | | ||||||||||| |||||||   |||||||||||||||||||| || || |||||||||||||||    
T  329419 tatgccttgtgttgtgctgttctgcattgtactgttctgtccagtacttactgttttgcaaaccaaac 329352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 22724578 - 22724739
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||| |||||| ||||||||| ||||||| ||||| |||  ||||||||  | |||| | |    
T  22724578 acgtacaagttgtctaaaatacaaaaatagcatttcgtcgcccaaaaatcatataatacagaaaattattcaatacca-gaaaaatttatcttgtgttgt 22724676  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaac 164  Q
    ||| |||| ||||||  | ||||||||||||||||||||||||||| || || ||||||||||    
T  22724677 tctgccttatgttgtgatattctatcttgtactgttctgtccagtacttactattttgcaaac 22724739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 5 - 173
Target Start/End: Complemental strand, 21133417 - 21133248
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa-ttactcaatgccataaaaaatttgacctgtgctattc 103  Q
    ||||| ||||||||||||| |||||| ||||| ||  ||| |||||||||||| |||||||| |||||||||| |||||||||||||  ||||| | |||    
T  21133417 tacaaattgtctaaaataccaaaatagcatttcgtctcccaaaaatcgtataaaacaaaaaaattactcaatgtcataaaaaatttgtactgtgttgttc 21133318  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | |||||||||||  |||||| ||||||| |||| |||  |||| || || |||||| ||||||||||||    
T  21133317 tgccttgtgttgtgatgttctttcttgtattgttatgtatagtacttactattttgccaaccaaacacac 21133248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 178
Target Start/End: Complemental strand, 38301387 - 38301221
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||  |||||| |||||||| |||| |||||||||| | ||||||||||| |||||| |||||||      | ||||| | ||||     
T  38301387 acaagttgtctaaaatatcaaaataacattttgtcccccaaaaatcgtattaaacaaaaaattattcaatgtcataaaa------atctgtgttgttctc 38301294  T
Q  106 ccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    |||||| ||||  |||||| |||||||||||||||| | ||| ||| | ||||||||||||||||||||||||    
T  38301293 ccttgtattgtgttgttctttcttgtactgttctgtactgtacttgttgttttgcaaaccaaacacaccctaa 38301221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 26652914 - 26652748
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| | || |||||||||||| ||||||||||| |||||| ||| ||||||||| ||| |||| |    
T  26652914 acgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaaaatttgtcctatgctgt 26652816  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| |||||| |||| ||||| | |||| ||||||| ||| | ||| ||| | |||| ||||||||||    
T  26652815 tctcccttgtattgtgctgttttttcttatactgttatgtactgtacttgatgttttacaaaccaaac 26652748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 178
Target Start/End: Complemental strand, 16963149 - 16962984
Alignment:
Q  9 agttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatac-aaaaaattactcaatgccataaaaaatttgacctgtgctattctacc 107  Q
    ||||||||||||||| |||||| |||||||| || | |||||||||||| || |||||||||||||||||||||||||||||| | |||||| ||         
T  16963149 agttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcatgtgctgtt----- 16963055  T
Q  108 ttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
     || | ||| |||   | | |||||||||||||||||||| || || ||||||||||||||||||||||||    
T  16963054 atgcgctgttctgccttgtgttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccctaa 16962984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 11250663 - 11250558
Alignment:
Q  9 agttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacct 108  Q
    ||||||||||||||| ||| || |||||||| || | |||||| ||||| ||||||||||||||||| |||||||||||||| |||||||| |||| |||    
T  11250663 agttgtctaaaataccaaactagcattttgtccctcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgcct 11250564  T
Q  109 tgtgtt 114  Q
    ||||||    
T  11250563 tgtgtt 11250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 22724079 - 22724254
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| ||||||||||||||| ||||| ||  ||| |||||| ||||||||| ||||||| ||||| |||| ||||||||  | |||| | |    
T  22724079 acgtacaagttgtataaaatacaaaaatagcatttcgtcacccaaaaatcatataatacagaaaattattcaataccat-aaaaatttatcttgtgttgt 22724177  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||| ||||||  ||| ||||||| |||| || ||||| |||||| || |||||||||||||| | |||||||    
T  22724178 tctgccttatgttgtgttgtcctatcttatactattttgtccggtatttactattttgcaaaccaaaaataccctaa 22724254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 43213975 - 43214141
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||| ||||||| |||||| ||||| || || | |||||| ||||| ||||||||| | |||||| ||| ||||||||| |||||||| ||||    
T  43213975 tacaagttgtcaaaaataccaaaatagcatttcgtgcctcaaaaatcctataaaacaaaaaatgattcaatgtcat-aaaaatttgtcctgtgctgttct 43214073  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    |||||||||||| ||||| | ||||| |||||| |     ||| ||| | |||||||||||||||||||||||    
T  43214074 accttgtgttgtgctgttttgtcttgcactgttat-----gtacttgttgttttgcaaaccaaacacacccta 43214141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 41665622 - 41665789
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| ||||| ||  ||| |||||  ||||| ||| ||||||| ||||| |||| ||||||||| | ||||||||    
T  41665622 acgtacaagttgtctaaaatacaaaaatagcatttcgtcacccaaaaattatataaaacagaaaattattcaataccat-aaaaatttgtcttgtgctat 41665720  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaaca 170  Q
    | | | || |||||| |||| |||||||||| |||| ||| | ||| || || ||||| ||||||||||    
T  41665721 tatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttactgttttgtaaaccaaaca 41665789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 2 - 152
Target Start/End: Complemental strand, 1363684 - 1363536
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||| |||||| |||||||||||||| ||||| || |||  ||||| |||||| ||||||||||| ||||||||||| |||||||| | |||| | |    
T  1363684 acgtacaggttgtcaaaaatacaaaaatagcatttcgtaccca-aaaattgtataaaacaaaaaattattcaatgccata-aaaatttgtcatgtgttgt 1363587  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgc 152  Q
    |||||||| || |||  ||||||||||| || |||| ||||||||| ||||    
T  1363586 tctaccttctgatgtgttgttctatcttatattgttatgtccagtacttgc 1363536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 167
Target Start/End: Complemental strand, 48445566 - 48445405
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||||||||| || |||||| |||||||| |||| |||||| ||||| |||| |||||| ||||| |||| ||||||||| | |||| | || |    
T  48445566 tacaagttgtctaaaacacgaaaataacattttgtcccccaaaaatcatataaaacaagaaattattcaataccat-aaaaatttgtcatgtgttgttat 48445468  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaa 167  Q
     |||||||||||  |||| |   |||||||||| ||||||||| || || | |||||||||||    
T  48445467 gccttgtgttgtgttgttatgcattgtactgttttgtccagtacttactgtcttgcaaaccaa 48445405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 34117498 - 34117417
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    |||||||||||||||||| | |||||| ||||| || |||| |||||||||||| || |||||||| |||||||||||||||    
T  34117498 gtacaagttgtctaaaatgccaaaatagcatttcgtcccccaaaaatcgtataaaacgaaaaattattcaatgccataaaaa 34117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 11 - 104
Target Start/End: Complemental strand, 46627209 - 46627116
Alignment:
Q  11 ttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||||  |||| ||  ||| ||||| |||||| ||||||||||| |||||||||||||||| ||| | | |||||||||    
T  46627209 ttgtctaaaatacaaaaatagtatttcgtctcccaaaaattgtataaaacaaaaaattattcaatgccataaaaaaattgtcttatgctattct 46627116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 47442840 - 47442765
Alignment:
Q  47 aaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgtt 122  Q
    |||| |||||| |||||||||||||||||| ||||||||||||| |||||  | |||| |||| ||||||||||||    
T  47442840 aaattgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtagtgttctgccttatgttgtactgtt 47442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 11822254 - 11822116
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| ||||| || |||| |||||||||||| | |||||| |  ||||||||||||||| |||| ||| || | |||| |||||||||||  ||||||    
T  11822254 aaaatagcatttcgtcccccaaaaatcgtataaaaaaaaaaaat--tcaatgccataaaaa-tttgtcctatgttgttctgccttgtgttgtgttgttct 11822158  T
Q  125 atcttgtactgttctgtccagtatttgctcttttgcaaacca 166  Q
    || || ||||||| ||| ||||| || || ||||||||||||    
T  11822157 attttatactgttatgttcagtacttactgttttgcaaacca 11822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 20127337 - 20127163
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattact----caatgccataaaaaatttgacctgtg 97  Q
    |||||||| |||| |||||||| |||||  ||||| || |||| |||||||||||| |||||||| || |    |||||| | ||||| |||| | ||||    
T  20127337 acgtacaatttgtgtaaaataccaaaatgacatttcgtcccccaaaaatcgtataaaacaaaaaaataataattcaatgctacaaaaa-tttgtcatgtg 20127239  T
Q  98 ctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    || ||||| ||||||||||  |||| | |||||||||||||| ||  ||| || || ||||||||||||||| |||||    
T  20127238 ctgttctatcttgtgttgtgttgttttgtcttgtactgttctatc--gtacttactgttttgcaaaccaaacgcaccc 20127163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 26910457 - 26910624
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||| ||||||||||||||  | || ||  ||| ||||||  ||||  || ||||||| ||||| ||||||||  |||| | || ||| |    
T  26910457 acgtacaagttgtcaaaaatacaaaaatagtaattcgtcacccaaaaatc--ataaatcagaaaattattcaataccataaaa--tttgtcttgcgctgt 26910552  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||||||||||||| |  ||| ||||| | || |||| ||||||||| || || |||||||||||||||||||    
T  26910553 tctaccttgtgttatgatgtcctatcctatattgttatgtccagtacttactgttttgcaaaccaaacacac 26910624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 37967022 - 37966850
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| |||||||  | |||||| ||||| || ||   |||||||||||| ||||||||||| | ||| |||| |||||||||   ||| ||||    
T  37967022 acgtacaagttatctaaaaatccaaaatagcatttcgtcccaaaaaaatcgtataaaacaaaaaattatttaataccat-aaaaatttgttatgtactat 37966924  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| | ||||||||| ||||| | |||| || | || |||| |||| || || |||||||||||||||| ||||    
T  37966923 tctgctttgtgttgtgctgttatgtcttatattattatgtctagtacttactattttgcaaaccaaacaaaccc 37966850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 34117404 - 34117349
Alignment:
Q  119 tgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||||| |||||||||||| ||||||||| || || ||||||||||||||||||||    
T  34117404 tgttctgtcttgtactgttatgtccagtacttactgttttgcaaaccaaacacacc 34117349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 17237124 - 17237038
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatt 88  Q
    |||||||| || |||||||  | |||||| ||||| || |||| |||||| ||||| ||||||||||| ||||||| ||||||||||    
T  17237124 acgtacaaattatctaaaaatccaaaataacatttcgtcccccaaaaatcttataaaacaaaaaattattcaatgcaataaaaaatt 17237038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22631787 - 22631722
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa 66  Q
    ||||||||||||||||||||||| |||||   |||| || |||| |||||||||||| ||||||||    
T  22631787 tacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaaaatcgtataaaacaaaaaa 22631722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 15035303 - 15035383
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaa 85  Q
    ||||| ||||||||||||  |||||| |||||||  | || ||||||||| || ||||||||||| ||||| |||||||||    
T  15035303 tacaaattgtctaaaatatcaaaataacattttgcccaccaaaaatcgtacaaaacaaaaaattattcaataccataaaaa 15035383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 46448799 - 46448855
Alignment:
Q  126 tcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaagagt 182  Q
    |||||||||||| |||| |||| || || ||||||||||||||| ||||||||||||    
T  46448799 tcttgtactgttatgtcaagtacttactattttgcaaaccaaacgcaccctaagagt 46448855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 101993 - 101817
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| ||   |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  101993 acgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 101894  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    |||||||| | ||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||||||||    
T  101893 tctaccttatattgtactgttctatcttatactgttctgtccggtacttgctgttttgcaaaccaaacacaccctaa 101817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 23619 - 23448
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||  || || | |||||||||||| |||||||||||||||||||||||||||||||| || ||||| |    
T  23619 acgtacaagttgtctaaaataccaaaataacatt--gtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgt 23522  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23521 tctgccttgtgttgtattgttctatcttgtactgttctgtccagtatttgctgttttgcaaaccaaacacaccc 23448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 1e-57; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 24242708 - 24242535
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| |||||||| |    
T  24242708 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgt 24242609  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| |||||||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||| ||||    
T  24242608 tctgccttgtgttgtactcttttatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacataccc 24242535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 17867879 - 17867712
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  17867879 acgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 17867780  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  17867779 tctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaac 17867712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 17877662 - 17877495
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| ||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||| | |    
T  17877662 acgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgt 17877563  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaac 169  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  17877562 tctgccttgtgttgtactgttctatgttgtactgttctgtccagtacttgctgttttgcaaaccaaac 17877495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 2 - 180
Target Start/End: Complemental strand, 2614940 - 2614762
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| | |||||||||||||||||||||||||||||| | |||| | |    
T  2614940 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgt 2614841  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||| |||||||||||||||||||||||| ||||||| ||||||||| ||| | ||||||||||||||||||||||||||    
T  2614840 tctgccttgtgttgtactgttctatcttatactgttttgtccagtacttgttgttttgcaaaccaaacacaccctaaga 2614762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 24203406 - 24203236
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | ||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  24203406 acgtacaagttgtctaaaataccaaaataacattttgtccctc-aaaattgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 24203308  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    | | |||||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||    
T  24203307 tttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgctgttttgcaaaccaaacacac 24203236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 172
Target Start/End: Complemental strand, 11212301 - 11212131
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||| ||||||||||||||||| |||||| |||||||| || | ||||||| |||| |||||||||||||||| ||||||||| ||||| |||||||| |    
T  11212301 acgtgcaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgaataaaacaaaaaattactcaaggccataaaacatttgtcctgtgctgt 11212202  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  11212201 tctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgctgttttgcaaaccaaacaca 11212131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 164
Target Start/End: Original strand, 10324196 - 10324358
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||  |||||||||||| ||||||||||||||||| ||||||||||||||  ||||||| |    
T  10324196 acgtacaagttgtctaaaataccaaaataacattttgtccccaaaaaatcgtataaaacaaaaaattactcaatcccataaaaaatttgttctgtgctgt 10324295  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaac 164  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| || || ||||||||||    
T  10324296 tctaccttgtgttgtaatgttctatcttgtactgttctgtccggtacttactgttttgcaaac 10324358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 3259727 - 3259546
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatt-----tgacctgt 96  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||||||||||||||     || | |||    
T  3259727 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtcatgt 3259628  T
Q  97 gctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    | | |||| ||||||||||||||||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||||||    
T  3259627 gttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatccttgctgttttgcaaaccaaacacaccctaa 3259546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 29814886 - 29814731
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttct 124  Q
    |||||| |||||||| |||| |||||||||||| |||||| ||||||||||||||||||||| ||| |||||| | |||| |||||||||||||||||||    
T  29814886 aaaataacattttgtcccccaaaaatcgtataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttct 29814787  T
Q  125 atcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    ||||||||||||||||||||||| || || ||||||||||||||||||||| ||||    
T  29814786 atcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccccaaga 29814731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 15277022 - 15277196
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| |  |||||| |||||||| || | |||||| ||||| ||||||||||||||||||||||||||  |||| | |||| | |    
T  15277022 acgtacaagttgtctaaaagaacaaaatagcattttgtccctcaaaaatcttataaaacaaaaaattactcaatgccataaaatttttgtcatgtgttgt 15277121  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  15277122 tctgccttatgttgtactgttctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 15277196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 3932892 - 3933064
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |    
T  3932892 acgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgt 3932991  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    | |  ||||||||||||||||||||||| ||||||| | |||| || ||| | ||||||||||||||||||||    
T  3932992 tttgtcttgtgttgtactgttctatcttatactgttttatccaatacttgttattttgcaaaccaaacacacc 3933064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 6 - 175
Target Start/End: Original strand, 32409941 - 32410110
Alignment:
Q  6 acaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattcta 105  Q
    |||||||||||||||||| ||||||  ||||||| || | |||||||||||| ||||||||||| |||||| ||||||||||||| | |||||| ||||     
T  32409941 acaagttgtctaaaataccaaaatagtattttgtccctcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgctgttctg 32410040  T
Q  106 ccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||||||| |||||||||||| ||||||| || ||||||||| |||| ||||||    
T  32410041 ccttgtgttgtactgttctatcttatactgttctgtctagtatttactgttttgcaaatcaaagacaccc 32410110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 25 - 180
Target Start/End: Complemental strand, 28502481 - 28502325
Alignment:
Q  25 aaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgcca-taaaaaatttgacctgtgctattctaccttgtgttgtactgttc 123  Q
    |||||| |||||||| |||| |||||||||||| |||||| |||||||||||||| ||||||| ||| |||||| | |||| ||||||||||||||||||    
T  28502481 aaaataacattttgtcccccaaaaatcgtataaaacaaaacattactcaatgccaataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttc 28502382  T
Q  124 tatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaaga 180  Q
    |||||||||||||||||||||||| || || ||||||||||||||||||||| ||||    
T  28502381 tatcttgtactgttctgtccagtacttactgttttgcaaaccaaacacaccccaaga 28502325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 134
Target Start/End: Original strand, 32132465 - 32132597
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||| |||||||| |    
T  32132465 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgt 32132564  T
Q  102 tctaccttgtgttgtactgttctatcttgtact 134  Q
    ||| |||||||||||||||||||||||||||||    
T  32132565 tctgccttgtgttgtactgttctatcttgtact 32132597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 17443306 - 17443135
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| || | || |||||||||||| ||| ||||||| |||||| |||| ||| |||| |||||||| |    
T  17443306 acgtacaagttgtctaaaataccaaaatagcatttcgtcctccaaaaatcgtataaaacataaaattattcaatgtcatacaaa-tttgtcctgtgctgt 17443208  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    | | |||||||||||  |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  17443207 tatgccttgtgttgtgttgttctatcttgtactgttctgtccaatatttgctgttttgcaaaccaaacacacc 17443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 10960044 - 10959872
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||| || | ||||||||||| |||||||| | |||| | |    
T  10960044 acgtacaagttgtctaaaatacaaaaatagcattttgtcccccaaaaatcgtataaaacaaaatatcattcaatgccata-aaaatttgtcatgtgttgt 10959946  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||| ||||||| |||  |||||| |||||||||||||| ||||||| || || |||||||||||||||||||||    
T  10959945 tctgccttgtgctgtgatgttctgtcttgtactgttctatccagtacttactgttttgcaaaccaaacacaccc 10959872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 15277365 - 15277510
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||||||   || |||||||||||| |||| |||||||||||||| ||||||||||||  ||||| | |    
T  15277365 acgtacaagttgtctaaaataccaaaatagcattttgtcttccaaaaatcgtataaaacaacaaattactcaatgctataaaaaatttgttctgtgttgt 15277464  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    | |||||||||||||||||||||||||| |||||||||||||||||    
T  15277465 tttaccttgtgttgtactgttctatcttatactgttctgtccagta 15277510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 11613876 - 11614037
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||| |||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| ||            
T  11613876 acgtacaagttgtataaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcc-------- 11613967  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
           ||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||||||    
T  11613968 -------tgtgttgtactgttctatcgtgtactgttctgtccaatacttgctgttttgcaaaccaaacacaccctaa 11614037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 34176874 - 34176752
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||| ||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  34176874 acgtacaagtagtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 34176775  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    |||  ||| ||||||||||||||    
T  34176774 tctgtcttatgttgtactgttct 34176752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 18057563 - 18057396
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| || | |  |||||||||||| ||| ||||||| |||||| |||| ||| |||| ||||||||||    
T  18057563 acgtacaagttgtctaaaataccaaaatagcatttcgtcctctaaaaatcgtataaaacataaaattattcaatgtcatacaaa-tttgtcctgtgctat 18057465  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaaca 170  Q
    | | ||||||||||| |||||||||||| ||||||||| |||| || || || ||||||||||||||||    
T  18057464 tatgccttgtgttgtgctgttctatcttttactgttctatccaatacttactgttttgcaaaccaaaca 18057396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 32805448 - 32805345
Alignment:
Q  76 gccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    ||||||||||||||| | |||||| |||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  32805448 gccataaaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgcaaaccaaacacaccc 32805349  T
Q  176 taag 179  Q
    ||||    
T  32805348 taag 32805345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 2 - 175
Target Start/End: Complemental strand, 10485201 - 10485030
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| |||| |||||||||||| ||||||||||| |||||| ||| ||| ||||| |||||| | |    
T  10485201 acgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattattcaatgtcat-aaatatttgtcctgtgttgt 10485103  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | | |||||| |||| ||||||| |||||||||||||||| | ||| ||||| |||| |||||||||| |||||    
T  10485102 t-tcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgctgttttacaaaccaaacgcaccc 10485030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 167008 - 167130
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| || ||   |||||| ||||| |||||||||||||||||| ||||||||||||| | |||||| |    
T  167008 acgtacaagttgtctaaaataccaaaatagcatttcgtcccttaaaaatcatataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgt 167107  T
Q  102 tctaccttgtgttgtactgttct 124  Q
    ||| |||||||||||||||||||    
T  167108 tctgccttgtgttgtactgttct 167130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 4494241 - 4494352
Alignment:
Q  60 caaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttg 159  Q
    |||||||||||||| |||||||||||||||| |||||| | |||| |||| |||||| |||||||||| |||||||||||||| |||| || || |||||    
T  4494241 caaaaaattactcattgccataaaaaatttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttg 4494340  T
Q  160 caaaccaaacac 171  Q
    ||||||||||||    
T  4494341 caaaccaaacac 4494352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 14808124 - 14808254
Alignment:
Q  41 cccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctg 140  Q
    |||| |||||||||||| || |||||||| ||||| ||||||||| |||| ||||||||||||| |||||| ||||  |||||| |||||||||||||||    
T  14808124 ccccaaaaatcgtataaaactaaaaattattcaattccataaaaa-tttgtcctgtgctattctcccttgtattgtgttgttctttcttgtactgttctg 14808222  T
Q  141 tccagtatttgctcttttgcaaaccaaacaca 172  Q
    | || |||||| | ||||||||||||||||||    
T  14808223 tacaatatttgttgttttgcaaaccaaacaca 14808254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 175
Target Start/End: Original strand, 14925544 - 14925713
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||||||||||||| |||||| ||||  || |||  |||||||||||| ||| ||||||| |||||| |||| ||| |||| |||||||| || |    
T  14925544 tacaagttgtctaaaataccaaaatagcattccgtcccctaaaaatcgtataaaacataaaattattcaatgtcatacaaa-tttgtcctgtgctgttat 14925642  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
     |||||||||||  ||||||||||| ||||||| ||||| ||| || ||  ||||||||||||||||||||    
T  14925643 gccttgtgttgtgttgttctatcttttactgttatgtcccgtacttacttctttgcaaaccaaacacaccc 14925713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 175
Target Start/End: Original strand, 31870193 - 31870357
Alignment:
Q  10 gttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctacctt 109  Q
    ||||||||||||||||||||| ||||| || |||| ||| |||||||| ||||||||||| |||||||||| ||||||||| | |||| | |||| ||||    
T  31870193 gttgtctaaaatacaaaaatagcatttcgtcccccaaaactcgtataaaacaaaaaattattcaatgccat-aaaaatttgtcatgtgttgttctccctt 31870291  T
Q  110 gtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
     | ||||  |||||| |||||||||||| ||| || || ||| | ||||||||||||||| |||||    
T  31870292 atattgtgttgttctttcttgtactgttatgtacaatacttgatgttttgcaaaccaaacgcaccc 31870357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 34684068 - 34684244
Alignment:
Q  2 acgtacaagttgtctaaaa-tacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttga-cctgtgct 99  Q
    ||||||||||||||||||| ||| |||||| |||||||| | || |||||||||||| ||||||||||||||| || ||||||   ||| | |||||| |    
T  34684068 acgtacaagttgtctaaaaataccaaaatagcattttgtcctccaaaaatcgtataaaacaaaaaattactcattgtcataaacttttttatcctgtgtt 34684167  T
Q  100 attctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     || | |||| ||||||  ||| || |||||||||||| |||||| || || || ||||||||||||||||||||||    
T  34684168 gttatgccttatgttgtgttgtcctgtcttgtactgttttgtccaatacttactgttttgcaaaccaaacacaccct 34684244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 23636267 - 23636097
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| | |||||  | |||||| ||||| || |||| ||||| |||||| ||||||||||| |||||||||||||||| | | | ||| |  |    
T  23636267 acgtacaagttatttaaaaatccaaaatagcatttcgtccccccaaaattgtataaaacaaaaaattattcaatgccataaaaaact-gtcatgtacagt 23636169  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||| ||||||  |||||| |||||||||||| | |||||||||| || |||||||||||||||||||    
T  23636168 tctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttactgttttgcaaaccaaacacac 23636097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 11382038 - 11381964
Alignment:
Q  101 ttctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||||    
T  11382038 ttctgccttgtgttgtactgttctatcttgtactgttctgttcagtacttactattttgcaaaccaaacacaccc 11381964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 173
Target Start/End: Complemental strand, 11279172 - 11279012
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||| | || | ||||||| |||| |||||||||||||||| ||||||||| |    | || |         
T  11279172 acgtacaagttgtctaaaataccaaaatagcattttatccctcaaaaatcgaataaaacaaaaaattactcaaggccataaaacagcacaacttt----- 11279078  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
          | |||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  11279077 ------tagtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacac 11279012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 2 - 178
Target Start/End: Complemental strand, 32860095 - 32859920
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||| ||||||||||||||||| ||||| ||  ||| ||||||  |||||||| ||||||| ||||| |||| |||||||||   |||||| |    
T  32860095 acgtacaagttttctaaaatacaaaaataacatttcgtcacccaaaaatcaaataatacagaaaattattcaataccat-aaaaatttgtattgtgctgt 32859997  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccctaa 178  Q
    ||| |||| | ||||  ||| ||||||||||||||| |||||| || || || || | |||| ||||||||||||||    
T  32859996 tctgccttatattgtgttgtcctatcttgtactgttatgtccaatacttactgttctacaaatcaaacacaccctaa 32859920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 166
Target Start/End: Complemental strand, 29054400 - 29054239
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| ||||| ||  ||| |||||| ||||||||| ||||||| ||||| ||||  |||||||  | |||||| |    
T  29054400 acgtacaagttgtctaaaatac-aaaataacatttcgtcacccaaaaatcatataatacagaaaattattcaataccat--aaaatttatcttgtgctgt 29054304  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaacca 166  Q
    |||  ||| ||||||  ||| ||||||||||||||| ||||||||| ||  | ||||||||||||    
T  29054303 tctgtcttatgttgtgttgtcctatcttgtactgttatgtccagtacttattattttgcaaacca 29054239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 11382108 - 11382041
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaatta 69  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| |||||||||||    
T  11382108 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaatta 11382041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 8177966 - 8178141
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattac--tcaatgccataaaaaatttgacctgtgct 99  Q
    |||| ||||||||||||||||| |||||| ||||| || |||| |||||| ||||| ||||||||  |   ||||||| || |||| || | | ||| ||    
T  8177966 acgttcaagttgtctaaaataccaaaataacatttcgtcccccaaaaatcatataaaacaaaaaaaaatgttcaatgctattaaaactt-gtcatgtact 8178064  T
Q  100 attctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     ||||  |||||||||| || |||||||||||| |||||| ||||||  ||  | ||||||||||||||||||||||    
T  8178065 gttctgtcttgtgttgtgctattctatcttgtattgttctatccagtgcttcatgttttgcaaaccaaacacaccct 8178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 3290716 - 3290635
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaa 83  Q
    ||||| |||||||||||||||| |||||| |||||||| || | |||||| ||||| ||||| ||||| |||||| ||||||    
T  3290716 acgtataagttgtctaaaataccaaaatagcattttgtccctcaaaaatcatataaaacaaacaattattcaatgtcataaa 3290635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 11675498 - 11675619
Alignment:
Q  41 cccctaaaatcgtataatac-aaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttct 139  Q
    |||| |||||||||||| || ||||||||| ||||||| || | ||||||| | ||||||||| |||||| ||||||  |||||| ||||||| |||| |    
T  11675498 ccccaaaaatcgtataaaacaaaaaaattattcaatgctat-agaaatttgtcatgtgctattttaccttttgttgtgttgttctgtcttgtattgttat 11675596  T
Q  140 gtccagtatttgctcttttgcaa 162  Q
    ||||| || || || ||||||||    
T  11675597 gtccaatacttactgttttgcaa 11675619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 3379751 - 3379583
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaa-ttactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||| |||||| |||||| ||||| || | || |||||| ||||| |||||||| ||  |||||||     |||||||||| ||| || |||    
T  3379751 tacaagttgtcttaaataccaaaatagcatttcgtcctccaaaaatcatataaaacaaaaaaattgttcaatgctt---aaaatttgacatgtactgttc 3379655  T
Q  104 taccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    | | |||||||||  | |||| ||||||| ||||||||||  || ||||  |||||||||||||||| ||||    
T  3379654 tgcattgtgttgtgttattctgtcttgtattgttctgtccgatacttgcggttttgcaaaccaaacaaaccc 3379583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 167119 - 167167
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||||||||||||||||||||||| || ||||||| | ||||||||||||    
T  167119 ttgtactgttctgtccagtatttactgttttgcacatcaaacacaccct 167167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 9902743 - 9902798
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataa 57  Q
    |||||||||||||||||||||| |||||| ||||| || |||| |||||| |||||    
T  9902743 acgtacaagttgtctaaaataccaaaataacatttcgtcccccaaaaatcatataa 9902798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 29424651 - 29424734
Alignment:
Q  1 tacgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaa 84  Q
    |||||||||||| |||||||||||||||||   |||||| | || |||| |||| || || |||||||| ||||| ||||||||    
T  29424651 tacgtacaagttatctaaaatacaaaaatagttttttgtccaccaaaaaacgtacaagaccaaaaattattcaataccataaaa 29424734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 18597287 - 18597408
Alignment:
Q  46 aaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattctaccttgtgttgtactgttctatcttgtactgttctgtccag 145  Q
    |||||| ||||| ||||||||||| ||||| ||||||||| |||    |||| | |||||||| |||||||  ||||||   |||||||||||||||||     
T  18597287 aaaatcatataaaacaaaaaattattcaataccataaaaa-tttattatgtgttgttctacctagtgttgtgttgttctgctttgtactgttctgtccaa 18597385  T
Q  146 tatttgctcttttgcaaaccaaa 168  Q
    || || || |||| |||||||||    
T  18597386 tacttactgttttacaaaccaaa 18597408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 12588 - 12760
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||| |||||||||||| | |||||| |    
T  12588 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgt 12687  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  | ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  12688 tctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 12760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 18106 - 18278
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| || | |||||||||||| ||||||||||||||||||| |||||||||||| | |||||| |    
T  18106 acgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgt 18205  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  | ||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||    
T  18206 tctgacatgtgttgtactgttctatcttgtactgttctatccagtacttgctgttttgcaaaccaaacacacc 18278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 2390 - 2564
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||   |||||| ||   |||||| ||||| |||||||||||||||||| ||||||||||||| | |||||| |    
T  2390 acgtacaagttgtctaaaataccaaaatagttttttgtcccataaaaatcctataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgt 2489  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    ||| |||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  2490 tctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgctgttttgcaaaccaaacacaccct 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 2 - 174
Target Start/End: Complemental strand, 51483 - 51311
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||  |||||| |||||||| || | |||||||||||| |||||||||||||||||| ||||||||||||| | |||||| |    
T  51483 acgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcttgtgctgt 51384  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
    |||  ||||| || ||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  51383 tctgtcttgtattatactgttctatattgtactgttctgtccagtacttgctgttttgcaaaccaaacacacc 51311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 93; Significance: 4e-45; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 2 - 173
Target Start/End: Original strand, 4631 - 4796
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||| ||||||||||||| |  |||||||||||||||  |   |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |    
T  4631 acgtaaaagttgtctaaaacatcaaaatatcattttgtctctaaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgt 4730  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacac 173  Q
    ||| |||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||||||    
T  4731 tctgccttgtgttgtactgttctatcttgtactgttctgtcca------gctgttttgcaaaccaaacacac 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 2 - 147
Target Start/End: Original strand, 2547 - 2692
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |||| |||||||||||| |||||||||||| ||||  ||||||||||||| | |||| | |    
T  2547 acgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgtgttgt 2646  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagta 147  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||||    
T  2647 tctaccttgtgttgtattgttctatcttatactgttatgtccagta 2692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 5495 - 5663
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    ||||||||| |||||||||||||||| ||||| |  |||| |||||||||||| ||||||||||| |||||| |||||||| |||| |||||||| ||||    
T  5495 tacaagttgcctaaaatacaaaaataacatttcgagccccaaaaatcgtataaaacaaaaaattattcaatgtcataaaaa-tttgtcctgtgctgttct 5593  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacacc 174  Q
     |||||||||||  |||||| |||||||||||| ||||||||| ||||| ||||||||||||||| ||||    
T  5594 gccttgtgttgtgttgttctgtcttgtactgttatgtccagtacttgctgttttgcaaaccaaacgcacc 5663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 122
Target Start/End: Original strand, 19142 - 19262
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| |||||| |||||||| |  | |||||||||||| |||||||||||||||||||||||||||||||| | |||||| |    
T  19142 acgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccatgtgctgt 19241  T
Q  102 tctaccttgtgttgtactgtt 122  Q
    |||||||||||||||||||||    
T  19242 tctaccttgtgttgtactgtt 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 15216 - 15047
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||||||||||||||||| ||||||  ||||||| |||| |||||| ||||| |||| ||||||||||||||||||||   |||  | |||| | |    
T  15216 acgtacaagttgtctaaaatactaaaatagtattttgtcccccaaaaatcttataaaacaacaaattactcaatgccataaattttttttcatgtgttgt 15117  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacac 171  Q
    ||| |||| |||||||||||||||| |||||||||||||||| ||| || || |||||||||||||||||    
T  15116 tctgccttatgttgtactgttctattttgtactgttctgtccggtacttactgttttgcaaaccaaacac 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 373016 - 373103
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaattt 89  Q
    |||||||||||||||||||||| ||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||||||    
T  373016 acgtacaagttgtctaaaataccaaaatatcattttgtccctcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaattt 373103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 373123 - 373171
Alignment:
Q  124 tatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacaca 172  Q
    ||| |||||||||||||| ||||| ||||| ||||||||||||||||||    
T  373123 tatgttgtactgttctgttcagtacttgctgttttgcaaaccaaacaca 373171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 15435 - 15551
Alignment:
Q  4 gtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattc 103  Q
    |||||||||||||||||||| |||||| |||||    || | |||||||||||| |||||||||||||||||| ||||||||||||  |||||||| |||    
T  15435 gtacaagttgtctaaaataccaaaatagcattt----cctcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcctgtgctgttc 15530  T
Q  104 taccttgtgttgtactgttct 124  Q
    | |||||||||||||||||||    
T  15531 tgccttgtgttgtactgttct 15551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 15540 - 15587
Alignment:
Q  128 ttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccc 175  Q
    |||||||||||||||||||| || || |||| ||||||||||||||||    
T  15540 ttgtactgttctgtccagtacttactgttttacaaaccaaacacaccc 15587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 176
Target Start/End: Original strand, 13742 - 13912
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||||||||||| || |||||| ||||  || |||| |||| | ||||| |||| |||||| ||||| |||| ||||||||| ||||||| ||| |    
T  13742 tacaagttgtctaaaacaccaaaatagcattccgtcccccaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgcaattat 13840  T
Q  105 accttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
     |||||| || |  ||||||   || ||||||||||||||||| || || ||||||||| ||||| ||||||    
T  13841 gccttgtattttgttgttctgcattatactgttctgtccagtacttactgttttgcaaatcaaacgcaccct 13912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 1695 - 1868
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    ||||||||||||||||||| || |||||| ||||| || || | ||| || ||||| ||||||||||| ||||| |||| |||||||||  ||||| | |    
T  1695 acgtacaagttgtctaaaaaaccaaaatagcatttcgtccctcaaaagtcatataaaacaaaaaattattcaataccat-aaaaatttgttctgtgttgt 1793  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    |||  |||||||||| ||||| |   |||||| |||||||| | || ||  | ||||||||| ||||| ||||||    
T  1794 tctctcttgtgttgtgctgttttgctttgtacagttctgtcaaatacttattgttttgcaaatcaaacgcaccct 1868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 2 - 176
Target Start/End: Original strand, 43002 - 43174
Alignment:
Q  2 acgtacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctat 101  Q
    |||||||| |||||||||| || |||||| ||| |||| |||  | |||| ||||| |||| |||||| ||||| ||| ||||| ||||| ||||  |||    
T  43002 acgtacaa-ttgtctaaaacaccaaaatagcatgttgtccccaaacaatcatataaaacaagaaattattcaataccacaaaaa-tttgatctgtattat 43099  T
Q  102 tctaccttgtgttgtactgttctatcttgtactgttctgtccagtatttgctcttttgcaaaccaaacacaccct 176  Q
    | | |||||| |||| |||||||   |||||||| |||||| |||| || || ||||||||||||||| ||||||    
T  43100 tatgccttgtattgtgctgttctgcattgtactgctctgtctagtacttactgttttgcaaaccaaacgcaccct 43174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 338802 - 338756
Alignment:
Q  131 tactgttctgtccagtatttgctcttttgcaaaccaaacacacccta 177  Q
    ||||||| ||||||||| ||||| |||||||||||||||||||||||    
T  338802 tactgttatgtccagtacttgctgttttgcaaaccaaacacacccta 338756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 3683 - 3791
Alignment:
Q  5 tacaagttgtctaaaatacaaaaatatcattttgttcccctaaaatcgtataatacaaaaaattactcaatgccataaaaaatttgacctgtgctattct 104  Q
    |||||||| |||||||||||||||||   |||| | | || |||||| ||||| | ||||||||| |||||  ||| |||| |||| | ||| |||||||    
T  3683 tacaagttatctaaaatacaaaaatagttttttatccaccaaaaatcatataagataaaaaattattcaatatcat-aaaagtttgtcatgtactattct 3781  T
Q  105 accttgtgtt 114  Q
    ||||||||||    
T  3782 accttgtgtt 3791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University