View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_high_85 (Length: 302)
Name: NF19103_high_85
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_high_85 |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 287
Target Start/End: Original strand, 10783295 - 10783567
Alignment:
| Q |
14 |
cctgtggaataataataatatacaaaaagttaaagatgcacatttccaatacaaatttccatcacatgtggagtcagttccatgtaatgtaaagttacta |
113 |
Q |
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| T |
10783295 |
cctgtggaataataataatatacaaaaagttaaagatgcacatttccaatacaaatttccatcacatgtggagtcagttccatgtaatgtaaagttacta |
10783394 |
T |
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| Q |
114 |
acataattatttattgcacaaattaaaggatagtggcatgaaaaaatcagagcatgtttagatgannnnnnnnnaaagaaagcatgtaaagatgaatttg |
213 |
Q |
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| T |
10783395 |
acataattatttattgcacaaattaaaggatagtggcatgaaaaaatcagagcatgtttagatga-ttttttttaaagaaagcatgtaaagatgaatttg |
10783493 |
T |
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| Q |
214 |
aagatgaatttcaacatttattataggagggaccacataaaggcattcatatgaaatgaattggcaagagttat |
287 |
Q |
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| T |
10783494 |
aagatgaatttcaacatttattataggagggaccacataaaggcattcatatgaaatgaattggcaagagttat |
10783567 |
T |
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