View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_high_93 (Length: 290)

Name: NF19103_high_93
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_high_93
NF19103_high_93
[»] chr3 (49 HSPs)
chr3 (73-290)||(2124711-2124928)
chr3 (76-290)||(30589702-30589925)
chr3 (74-290)||(24149843-24150058)
chr3 (76-290)||(36054016-36054239)
chr3 (77-290)||(38628826-38629037)
chr3 (73-290)||(19551158-19551385)
chr3 (100-290)||(26556757-26556947)
chr3 (73-249)||(50899493-50899678)
chr3 (73-290)||(26004854-26005081)
chr3 (73-247)||(23697835-23698008)
chr3 (73-247)||(23716290-23716463)
chr3 (73-247)||(23734746-23734919)
chr3 (77-290)||(26292570-26292790)
chr3 (79-247)||(23754405-23754582)
chr3 (107-290)||(23367328-23367497)
chr3 (146-290)||(46223312-46223456)
chr3 (76-203)||(35731731-35731867)
chr3 (188-290)||(23360555-23360657)
chr3 (160-290)||(45214090-45214220)
chr3 (160-249)||(33416942-33417031)
chr3 (160-244)||(48380096-48380182)
chr3 (188-290)||(44904963-44905065)
chr3 (160-290)||(31645370-31645502)
chr3 (188-249)||(50761271-50761332)
chr3 (188-249)||(52617134-52617195)
chr3 (160-249)||(10661143-10661234)
chr3 (160-249)||(10728174-10728265)
chr3 (160-249)||(18750589-18750680)
chr3 (160-249)||(34483252-34483343)
chr3 (160-249)||(45254602-45254693)
chr3 (135-243)||(34290220-34290330)
chr3 (188-290)||(36673266-36673368)
chr3 (160-246)||(44040951-44041037)
chr3 (160-243)||(50902514-50902599)
chr3 (188-241)||(5493033-5493086)
chr3 (160-290)||(11432503-11432635)
chr3 (188-249)||(23752551-23752612)
chr3 (184-249)||(46251246-46251311)
chr3 (160-241)||(17947174-17947257)
chr3 (194-290)||(20833890-20833986)
chr3 (188-244)||(39039062-39039118)
chr3 (160-249)||(39841603-39841694)
chr3 (160-249)||(51736915-51737006)
chr3 (160-249)||(54629806-54629897)
chr3 (227-290)||(33417082-33417145)
chr3 (194-249)||(50902469-50902524)
chr3 (187-249)||(44707922-44707984)
chr3 (194-244)||(52811373-52811423)
chr3 (160-246)||(14978492-14978580)
[»] chr8 (40 HSPs)
chr8 (73-290)||(10795381-10795597)
chr8 (76-290)||(9458374-9458587)
chr8 (73-290)||(7148888-7149114)
chr8 (100-290)||(4655966-4656156)
chr8 (73-290)||(40264281-40264507)
chr8 (73-290)||(42275799-42276024)
chr8 (76-243)||(2113646-2113821)
chr8 (73-276)||(39371185-39371398)
chr8 (73-289)||(43604382-43604593)
chr8 (73-290)||(41385876-41386090)
chr8 (103-249)||(43489827-43489959)
chr8 (73-182)||(41964697-41964815)
chr8 (100-243)||(41964650-41964779)
chr8 (194-290)||(1605806-1605902)
chr8 (160-290)||(38805930-38806059)
chr8 (103-223)||(42366798-42366916)
chr8 (160-246)||(9209860-9209946)
chr8 (184-249)||(28620658-28620723)
chr8 (160-244)||(31626256-31626342)
chr8 (186-249)||(42304790-42304853)
chr8 (188-290)||(35143064-35143166)
chr8 (160-290)||(14781254-14781386)
chr8 (188-249)||(16365263-16365324)
chr8 (160-290)||(39466640-39466772)
chr8 (160-290)||(44724903-44725035)
chr8 (160-249)||(4030491-4030582)
chr8 (160-244)||(4302163-4302247)
chr8 (160-249)||(18305124-18305215)
chr8 (160-249)||(19717028-19717119)
chr8 (160-249)||(20831127-20831218)
chr8 (186-289)||(43307661-43307764)
chr8 (188-290)||(17791547-17791649)
chr8 (173-290)||(10128226-10128343)
chr8 (160-290)||(18957840-18957972)
chr8 (194-243)||(40012348-40012397)
chr8 (194-244)||(5266793-5266843)
chr8 (188-249)||(7467393-7467454)
chr8 (186-239)||(10294564-10294617)
chr8 (160-222)||(37857834-37857898)
chr8 (102-154)||(18957966-18958018)
[»] chr1 (26 HSPs)
chr1 (73-290)||(52706251-52706468)
chr1 (73-290)||(45535620-45535837)
chr1 (76-290)||(14389290-14389502)
chr1 (73-290)||(26881822-26882048)
chr1 (73-290)||(45319329-45319555)
chr1 (112-249)||(39758797-39758922)
chr1 (112-249)||(39764151-39764276)
chr1 (162-249)||(19894776-19894863)
chr1 (160-290)||(1923375-1923505)
chr1 (187-249)||(48198932-48198994)
chr1 (187-249)||(48207515-48207577)
chr1 (160-249)||(49231940-49232031)
chr1 (160-290)||(6313532-6313664)
chr1 (160-290)||(25613048-25613180)
chr1 (160-290)||(29395544-29395676)
chr1 (160-249)||(28386606-28386697)
chr1 (160-249)||(51702550-51702641)
chr1 (160-244)||(5494310-5494396)
chr1 (188-249)||(9321667-9321728)
chr1 (188-249)||(20111729-20111790)
chr1 (188-249)||(29220098-29220159)
chr1 (188-249)||(51826008-51826069)
chr1 (160-243)||(28038388-28038471)
chr1 (160-243)||(46328922-46329007)
chr1 (188-244)||(38535309-38535365)
chr1 (188-244)||(38557527-38557583)
[»] chr2 (29 HSPs)
chr2 (73-289)||(6288563-6288779)
chr2 (76-290)||(29941756-29941969)
chr2 (73-290)||(45547769-45547995)
chr2 (76-288)||(35171389-35171614)
chr2 (76-243)||(42626455-42626629)
chr2 (96-290)||(7486963-7487142)
chr2 (103-290)||(36597651-36597837)
chr2 (135-247)||(14919805-14919919)
chr2 (167-242)||(45497469-45497544)
chr2 (167-242)||(45505211-45505286)
chr2 (129-249)||(2289202-2289323)
chr2 (160-290)||(27979847-27979977)
chr2 (160-290)||(28066377-28066507)
chr2 (112-249)||(36599192-36599328)
chr2 (160-249)||(34027824-34027913)
chr2 (165-247)||(20156630-20156712)
chr2 (160-290)||(18178228-18178360)
chr2 (160-290)||(25289111-25289243)
chr2 (160-290)||(26789741-26789873)
chr2 (160-249)||(13832716-13832807)
chr2 (186-249)||(3464571-3464634)
chr2 (188-246)||(38821301-38821359)
chr2 (73-106)||(7487321-7487354)
chr2 (76-129)||(21735793-21735845)
chr2 (160-290)||(28845534-28845666)
chr2 (160-249)||(33136550-33136641)
chr2 (194-249)||(43079475-43079530)
chr2 (160-249)||(7027860-7027952)
chr2 (229-290)||(24192669-24192730)
[»] scaffold0237 (1 HSPs)
scaffold0237 (76-290)||(20453-20666)
[»] chr6 (15 HSPs)
chr6 (76-290)||(29864758-29864971)
chr6 (73-290)||(3109356-3109582)
chr6 (75-290)||(6475749-6475973)
chr6 (187-249)||(7104509-7104571)
chr6 (187-249)||(8790059-8790121)
chr6 (188-249)||(7498076-7498137)
chr6 (160-244)||(10262854-10262938)
chr6 (160-249)||(34774341-34774432)
chr6 (160-243)||(5958005-5958088)
chr6 (160-244)||(30384224-30384310)
chr6 (188-249)||(14261598-14261659)
chr6 (160-290)||(31896593-31896725)
chr6 (188-244)||(4199640-4199696)
chr6 (188-290)||(31068406-31068508)
chr6 (188-249)||(27585232-27585293)
[»] chr5 (21 HSPs)
chr5 (73-290)||(11632692-11632918)
chr5 (73-290)||(13949807-13950023)
chr5 (103-290)||(10553629-10553816)
chr5 (73-290)||(40411271-40411498)
chr5 (76-290)||(3603466-3603667)
chr5 (156-290)||(10553445-10553579)
chr5 (144-288)||(18676939-18677084)
chr5 (160-290)||(26629518-26629648)
chr5 (161-290)||(13717052-13717183)
chr5 (102-186)||(32827937-32828022)
chr5 (102-249)||(2275316-2275463)
chr5 (188-249)||(1151447-1151508)
chr5 (188-249)||(4549413-4549474)
chr5 (160-249)||(1459343-1459434)
chr5 (160-249)||(13999262-13999353)
chr5 (160-249)||(40012865-40012956)
chr5 (160-222)||(10572243-10572305)
chr5 (160-243)||(39853308-39853393)
chr5 (160-244)||(5950074-5950160)
chr5 (188-249)||(13926918-13926979)
chr5 (160-249)||(7947181-7947272)
[»] chr7 (38 HSPs)
chr7 (73-290)||(43056694-43056910)
chr7 (73-283)||(35089110-35089329)
chr7 (73-290)||(152715-152941)
chr7 (73-290)||(12252392-12252618)
chr7 (73-290)||(30111647-30111873)
chr7 (73-290)||(27417654-27417880)
chr7 (73-290)||(33475393-33475617)
chr7 (188-290)||(47912530-47912632)
chr7 (167-249)||(42677294-42677376)
chr7 (160-249)||(29893912-29894003)
chr7 (160-290)||(28343266-28343398)
chr7 (160-249)||(18839250-18839341)
chr7 (187-242)||(26183079-26183134)
chr7 (160-290)||(30889145-30889273)
chr7 (160-290)||(34114547-34114677)
chr7 (160-290)||(23102247-23102379)
chr7 (160-242)||(33891401-33891485)
chr7 (187-244)||(46035502-46035559)
chr7 (160-249)||(510602-510693)
chr7 (160-244)||(3023881-3023967)
chr7 (160-249)||(29613952-29614044)
chr7 (188-290)||(48136368-48136470)
chr7 (188-249)||(12741359-12741420)
chr7 (160-249)||(7994112-7994203)
chr7 (160-249)||(9881447-9881538)
chr7 (186-290)||(37971512-37971616)
chr7 (160-247)||(40098204-40098291)
chr7 (187-241)||(12893165-12893219)
chr7 (195-241)||(28034295-28034341)
chr7 (195-249)||(30823580-30823634)
chr7 (188-242)||(33383627-33383681)
chr7 (188-222)||(44121134-44121168)
chr7 (188-249)||(32884739-32884800)
chr7 (188-249)||(39029039-39029100)
chr7 (160-222)||(47067656-47067720)
chr7 (173-233)||(28422530-28422590)
chr7 (160-249)||(39785052-39785143)
chr7 (186-242)||(44255946-44256002)
[»] chr4 (32 HSPs)
chr4 (73-290)||(42217454-42217670)
chr4 (73-290)||(7820803-7821029)
chr4 (73-289)||(8583008-8583233)
chr4 (73-290)||(3434833-3435050)
chr4 (73-290)||(56398903-56399119)
chr4 (73-290)||(42315748-42315962)
chr4 (73-290)||(7808876-7809078)
chr4 (156-290)||(44930559-44930689)
chr4 (160-244)||(44647672-44647756)
chr4 (186-249)||(49834020-49834083)
chr4 (184-249)||(52110234-52110299)
chr4 (160-249)||(32323025-32323116)
chr4 (187-249)||(38234588-38234650)
chr4 (160-290)||(27769020-27769152)
chr4 (160-290)||(41726062-41726194)
chr4 (188-249)||(48531968-48532029)
chr4 (184-244)||(25936899-25936959)
chr4 (160-249)||(54342103-54342194)
chr4 (160-243)||(5801661-5801746)
chr4 (188-290)||(23988183-23988285)
chr4 (160-290)||(48262031-48262163)
chr4 (160-249)||(29649177-29649268)
chr4 (194-290)||(32683141-32683237)
chr4 (187-243)||(53272824-53272880)
chr4 (188-290)||(5442379-5442479)
chr4 (194-241)||(28484864-28484911)
chr4 (160-246)||(16654131-16654217)
chr4 (160-221)||(37916747-37916811)
chr4 (229-290)||(47686840-47686901)
chr4 (188-241)||(50019177-50019230)
chr4 (258-290)||(28846176-28846208)
chr4 (160-249)||(51321812-51321903)
[»] scaffold0153 (1 HSPs)
scaffold0153 (73-290)||(33831-34038)
[»] scaffold0016 (1 HSPs)
scaffold0016 (73-290)||(80799-81006)
[»] scaffold0472 (1 HSPs)
scaffold0472 (167-249)||(985-1067)
[»] scaffold0202 (1 HSPs)
scaffold0202 (165-222)||(15699-15756)
[»] scaffold0940 (1 HSPs)
scaffold0940 (160-290)||(3580-3712)
[»] scaffold0054 (1 HSPs)
scaffold0054 (160-249)||(36448-36539)
[»] scaffold0042 (1 HSPs)
scaffold0042 (188-244)||(57222-57278)
[»] scaffold0383 (1 HSPs)
scaffold0383 (160-222)||(16222-16286)
[»] scaffold0152 (2 HSPs)
scaffold0152 (160-222)||(20449-20513)
scaffold0152 (160-222)||(29288-29352)
[»] scaffold0839 (1 HSPs)
scaffold0839 (160-249)||(3161-3252)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 3e-91; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 2124928 - 2124711
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  2124928 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 2124829  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||        |||||||||||||||    
T  2124828 aaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaattttcaagattttttttatcaaaacagtcttt 2124729  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  2124728 taaaatctcaatccaata 2124711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 30589702 - 30589925
Alignment:
Q  76 tgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttg 166  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30589702 tgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttg 30589801  T
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaaca 266  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        |||||||||    
T  30589802 attgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaca 30589901  T
Q  267 gtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||    
T  30589902 gtcttttaaaatctcaatccaata 30589925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 74 - 290
Target Start/End: Complemental strand, 24150058 - 24149843
Alignment:
Q  74 actgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaa 173  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24150058 actgtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgtaa 24149960  T
Q  174 aaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtctttt 273  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||| || ||||||||||||||||        ||||||| ||||||||    
T  24149959 aaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatataatccaacaaagtcatttaaaatcttcaagattttttctatcaaaatagtctttt 24149860  T
Q  274 aaaatctcaatccaata 290  Q
    ||||||| |||||||||    
T  24149859 aaaatcttaatccaata 24149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 36054239 - 36054016
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttg 166  Q
    |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  36054239 tgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttg 36054140  T
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaaca 266  Q
    |||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||| |    
T  36054139 attgtaaaaagtctttgaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaata 36054040  T
Q  267 gtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||    
T  36054039 gtcttttaaaatctcaatccaata 36054016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 77 - 290
Target Start/End: Complemental strand, 38629037 - 38628826
Alignment:
Q  77 gtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaa 176  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  38629037 gtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaa-gaatcttgattgtaaaaa 38628940  T
Q  177 gtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaa 276  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||| ||||||| ||||||||||| |||||||        ||||||| |||||||||||    
T  38628939 gtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaattcaacaaagtcttttaaaattttcaagattttttctatcaaaagagtcttttaaa 38628840  T
Q  277 atctcaatccaata 290  Q
    ||||||||||||||    
T  38628839 atctcaatccaata 38628826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 19551385 - 19551158
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19551385 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 19551286  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttc-aagannnnnnnnatcaa 262  Q
    ||||||||||||||||||| ||| ||| | |||||||||| ||||||||||||||||||||| ||| ||||||||||||||| || |        |||||    
T  19551285 ttgattgtaaaaagtcttttaaaaaaaatcttttaaaatcccacaaaatcaatacaatccaataaagtcttttaaaatcttcaaaaaaaaactctatcaa 19551186  T
Q  263 aacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||||||    
T  19551185 aacagtcttttaaaatctcaatccaata 19551158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 26556757 - 26556947
Alignment:
Q  100 tttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaa 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||    
T  26556757 tttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgatcgtagaaagtctttcaaaaaaagtcttttaa 26556856  T
Q  200 aatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    |||| |||||||||||||||||| |||||| |||||||||||||| ||||        |||||||||||||||||||||||||||||||||    
T  26556857 aatcccacaaaatcaatacaatcgaacaaagtcttttaaaatctttaagattttttctatcaaaacagtcttttaaaatctcaatccaata 26556947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 73 - 249
Target Start/End: Complemental strand, 50899678 - 50899493
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50899678 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 50899579  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  50899578 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatccgacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 50899493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 26005081 - 26004854
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26005081 tactgtatctttaaatttattgacccttttaaaatctttaaaattcattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 26004982  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga-nnnnnnnnatcaa 262  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||||||| ||| ||||||| || ||||         |||||    
T  26004981 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaattcaacaaactctcttaaaatatttaagatttttttctatcaa 26004882  T
Q  263 aacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||||||    
T  26004881 aacagtcttttaaaatctcaatccaata 26004854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 23697835 - 23698008
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  23697835 tactgtatctttaaatttattgacccttttaaaatct-taaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaataatcttgattgta 23697933  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    |||||||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23697934 aaaagtcttttaaaaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaa 23698008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 23716290 - 23716463
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  23716290 tactgtatctttaaatttattgacccttttaaaatct-taaaaatcctttaaaatctatatcatgaatcaattaaaatcttgcaaataatcttgattgta 23716388  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    |||||||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23716389 aaaagtcttttaaaaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaa 23716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 73 - 247
Target Start/End: Original strand, 23734746 - 23734919
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  23734746 tactgtatctttaaatttattgacccttttaaaatct-taaaaatcctttaaaatctatatcatgaatcaattaaaatcttgcaaataatcttgattgta 23734844  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    |||||||||| ||| ||||| |||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23734845 aaaagtcttttaaaaaaagtcttttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaa 23734919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 77 - 290
Target Start/End: Complemental strand, 26292790 - 26292570
Alignment:
Q  77 gtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttga 167  Q
    ||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  26292790 gtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatctattaaaatcttgcaaagaatcttga 26292691  T
Q  168 ttgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacag 267  Q
    ||||||||||||||| ||| ||||| |||||||||  |||||||| |||||||||||||||| |||||||||||||||||||        ||||||||||    
T  26292690 ttgtaaaaagtcttt-aaaaaaagtcttttaaaattccacaaaat-aatacaatccaacaaagtcttttaaaatcttcaagatattttctatcaaaacag 26292593  T
Q  268 tcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||    
T  26292592 tcttttaaaatctcaatccaata 26292570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 247
Target Start/End: Original strand, 23754405 - 23754582
Alignment:
Q  79 atctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgatt 169  Q
    ||||||||||||||||||||||||||||||         ||| |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||    
T  23754405 atctttaaatttattgacccttttaaaatcttaaaaatccatcaaaatcctttaaaatctatatcatgaatccattaaaatcttgtaaagaaccttgatt 23754504  T
Q  170 gtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    |||||||||||| |||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  23754505 gtaaaaagtcttccaaaaaaagtattttgaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaa 23754582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 107 - 290
Target Start/End: Original strand, 23367328 - 23367497
Alignment:
Q  107 tccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctca 206  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||              |||||||||| ||    
T  23367328 tccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgtaaaaagtc--------------ttttaaaatccca 23367413  T
Q  207 caaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||| |||||||||||||||    
T  23367414 caaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatccaata 23367497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 146 - 290
Target Start/End: Complemental strand, 46223456 - 46223312
Alignment:
Q  146 aaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttc 245  Q
    ||||||||| ||||||||||||||||||||| ||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  46223456 aaaatcttggaaagaatcttgattgtaaaaaatcttttaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttc 46223357  T
Q  246 aagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||        ||||||||||||||||||||||||||| |||||    
T  46223356 aagattttttctatcaaaacagtcttttaaaatctcaattcaata 46223312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 76 - 203
Target Start/End: Original strand, 35731731 - 35731867
Alignment:
Q  76 tgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttg 166  Q
    ||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  35731731 tgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttg 35731830  T
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatc 203  Q
    || ||||||||||||||||| ||| | ||||||||||    
T  35731831 atcgtaaaaagtctttcaaaaaaaatcttttaaaatc 35731867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 23360555 - 23360657
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||| ||||||||||||    
T  23360555 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttatatcaaaacagtcttttagaatctcaatcca 23360654  T
Q  288 ata 290  Q
    |||    
T  23360655 ata 23360657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 45214220 - 45214090
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||              
T  45214220 aatcttgattgtaaaaagccttttaaataaagtcttttaaaatctcacaaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttttgc 45214121  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||| ||||| |||||||||||||||||    
T  45214120 caaaacaatctttcaaaatctcaatccaata 45214090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 33416942 - 33417031
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||||||||||||||| ||  || ||| | ||||||||||||| ||| ||  |||||||| | |||||||||||||||||||||||    
T  33416942 aatcttgattgtaaaaagtcatttgaaaaaaatcttttaaaatctcataaagtctttacaatcctataaaatcttttaaaatcttcaaga 33417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 48380096 - 48380182
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| ||||||||||||||||    
T  48380096 aatcttgagtgtataaagtcttttacataaaaagttttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatctt 48380182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 44905065 - 44904963
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||| ||||||    
T  44905065 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagaccttttttattaaaatagtcttttaaaatcttaatcca 44904966  T
Q  288 ata 290  Q
    |||    
T  44904965 ata 44904963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 31645502 - 31645370
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  31645502 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 31645403  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || ||||  |||||||||||||| |||||||||    
T  31645402 attaaaattgtcttttaaaatcttaatccaata 31645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 50761332 - 50761271
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  50761332 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 50761271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 52617195 - 52617134
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||||| |||||||||||||| ||||    
T  52617195 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcttttaaaatcttaaaga 52617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 10661143 - 10661234
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||| ||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  10661143 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatatcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 10661234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 10728265 - 10728174
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  10728265 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacattcttttaaaatcttaaaga 10728174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 18750589 - 18750680
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  18750589 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 34483343 - 34483252
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  34483343 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 34483252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 45254693 - 45254602
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  45254693 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 45254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 34290330 - 34290220
Alignment:
Q  135 ataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatc 232  Q
    ||||||||||||||||||||    || |||  |||||||||||| || ||  || ||||| |||||||||| || |||||||||||||||  ||||| ||    
T  34290330 ataaatccattaaaatcttgtgttaaaaattctgattgtaaaaaatcattttaaaaaagtcttttaaaatcccataaaatcaatacaatcacacaaagtc 34290231  T
Q  233 ttttaaaatct 243  Q
    |||||||||||    
T  34290230 ttttaaaatct 34290220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 36673368 - 36673266
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||  ||||||    
T  36673368 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 36673269  T
Q  288 ata 290  Q
    |||    
T  36673268 ata 36673266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 44041037 - 44040951
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttca 246  Q
    |||| |||||||||| |||| || ||| ||||| || |||||||  |||||||||||| ||||   |||||||||||||||||||||    
T  44041037 aatcctgattgtaaagagtcatttaaaaaaagtcttctaaaatccaacaaaatcaatataatctcgcaaaatcttttaaaatcttca 44040951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 50902599 - 50902514
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||    
T  50902599 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 50902514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 5493033 - 5493086
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    ||||||||||||||||||||  ||||||||||||   |||||||||||||||||    
T  5493033 aaagtattttaaaatctcactgaatcaatacaatttcacaaaatcttttaaaat 5493086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 11432503 - 11432635
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||||||||| || ||||            
T  11432503 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaattttaaagacttttttt 11432602  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  11432603 attaaaatagtcttttaaaatcctaatccaata 11432635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 23752612 - 23752551
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  23752612 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 23752551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 184 - 249
Target Start/End: Complemental strand, 46251311 - 46251246
Alignment:
Q  184 aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||||| ||||||||||||| |||  ||||||||||  ||||| |||||||||||||| ||||    
T  46251311 aaataaagtcttttaaaatctcaaaaagccaatacaatcacacaaagtcttttaaaatctttaaga 46251246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 241
Target Start/End: Original strand, 17947174 - 17947257
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||    
T  17947174 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaat 17947257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 20833890 - 20833986
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||| ||| |||||||||||||  ||| |||||||||||||||| ||||        || |||| ||||||||||||||  |||||||||    
T  20833890 ttttaaaatcttacagaatcaatacaatcttacacaatcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaata 20833986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 39039062 - 39039118
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||| ||||||||||||||| |||||||||||||  ||||| || |||||||||||    
T  39039062 aaagtcttttaaaatctcacagaatcaatacaatctcacaaagtcatttaaaatctt 39039118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 39841694 - 39841603
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||   || | |||||||||||||| ||||    
T  39841694 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacataatcaatacaatctcgcacagtcttttaaaatcttaaaga 39841603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 51737006 - 51736915
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||   || | |||||||||||||| ||||    
T  51737006 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcgcatagtcttttaaaatcttaaaga 51736915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 54629806 - 54629897
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||| ||||| ||||    
T  54629806 aatcttgaatgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaacatcttaaaga 54629897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 227 - 290
Target Start/End: Original strand, 33417082 - 33417145
Alignment:
Q  227 aaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||| |||||||        ||||||| |||||||||||||||||||||||||    
T  33417082 aaaatcttttaaaattttcaagactttttcaatcaaaatagtcttttaaaatctcaatccaata 33417145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 50902524 - 50902469
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  50902524 ttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 50902469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 44707922 - 44707984
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||||||| ||||  |||||||  ||||| |||||||||||||| ||||    
T  44707922 taaagtcttttaaaatctcacagaatcggtacaatctcacaaagtcttttaaaatcttaaaga 44707984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 52811373 - 52811423
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  52811373 ttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctt 52811423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 14978492 - 14978580
Alignment:
Q  160 aatcttgattgtaaaaagtctttc--aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttca 246  Q
    |||| |||||||||||||| |||   ||||||||  ||||||||||  ||||| |||||| ||||  ||||| ||||||||||||||||    
T  14978492 aatcctgattgtaaaaagtttttttaaaataaagatttttaaaatccaacaaagtcaatataatcttacaaagtcttttaaaatcttca 14978580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 10795597 - 10795381
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10795597 tactgtatctttaaatttattgacccttttaaaatct-taaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 10795499  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||    
T  10795498 aaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttt 10795399  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  10795398 taaaatctcaatccaata 10795381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 9458374 - 9458587
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  9458374 tgtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaacaatcttgattgtaaaa 9458472  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  9458473 agtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaa 9458572  T
Q  276 aatctcaatccaata 290  Q
    |||||||||||||||    
T  9458573 aatctcaatccaata 9458587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 7148888 - 7149114
Alignment:
Q  73 tactgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7148888 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 7148987  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  7148988 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 7149087  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  7149088 acagtcttttaaaatctcaatccaata 7149114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 100 - 290
Target Start/End: Original strand, 4655966 - 4656156
Alignment:
Q  100 tttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaa 199  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  4655966 tttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaaaaaagtcttttaa 4656065  T
Q  200 aatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  4656066 aatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaata 4656156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 40264507 - 40264281
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  40264507 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaacaatc 40264408  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  40264407 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 40264308  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  40264307 acagtcttttaaaatctcaatccaata 40264281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 42275799 - 42276024
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc--------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatct 164  Q
    ||||||||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42275799 tactgtatctttaaatttattgacccttttaaaatcttaaaaatcaataaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatct 42275898  T
Q  165 tgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaa 264  Q
    |||||||||||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||| |||||||||||||||||||        |||||||    
T  42275899 tgattgtaaaaagtctttcaaaaaaagtcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaa 42275998  T
Q  265 cagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||| ||||    
T  42275999 cagtcttttaaaatctcaatctaata 42276024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 76 - 243
Target Start/End: Original strand, 2113646 - 2113821
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatc--------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttga 167  Q
    |||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2113646 tgtatctttaaattcattgacccttttaaaatcttaaaattcattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttga 2113745  T
Q  168 ttgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  2113746 ttgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatct 2113821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 73 - 276
Target Start/End: Complemental strand, 39371398 - 39371185
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  39371398 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctctaaaatctatatcatgaatccattaaaatctttcaaagaatc 39371299  T
Q  164 ttgattgta-aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaa 262  Q
    ||||||||| ||||||||||| || ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |        |||||    
T  39371298 ttgattgtaaaaaagtctttccaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaa 39371199  T
Q  263 aacagtcttttaaa 276  Q
    ||||||||||||||    
T  39371198 aacagtcttttaaa 39371185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 73 - 289
Target Start/End: Complemental strand, 43604593 - 43604382
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43604593 tactatatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 43604494  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    |||||||||||              |||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  43604493 ttgattgtaaa--------------aagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 43604408  T
Q  264 acagtcttttaaaatctcaatccaat 289  Q
    ||||||||||||||||||||||||||    
T  43604407 acagtcttttaaaatctcaatccaat 43604382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 41386090 - 41385876
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||| |||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||||||||||||||||             
T  41386090 tactttatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttg--------- 41386000  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
       |||||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||||| ||||||||||||||||| |        ||||||    
T  41385999 ---attgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaattaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaa 41385903  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  41385902 acagtcttttaaaatctcaatccaata 41385876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 103 - 249
Target Start/End: Original strand, 43489827 - 43489959
Alignment:
Q  103 aaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaat 202  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||    
T  43489827 aaaatccattaaaatcctctaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtc--------------ttttaaaat 43489912  T
Q  203 ctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||    
T  43489913 cccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaga 43489959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 41964815 - 41964697
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaa---------aatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41964815 tactgtatctttaaatttatcgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaacaatc 41964716  T
Q  164 ttgattgtaaaaagtcttt 182  Q
    |||||||||||||||||||    
T  41964715 ttgattgtaaaaagtcttt 41964697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 243
Target Start/End: Complemental strand, 41964779 - 41964650
Alignment:
Q  100 tttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaa 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||              |||    
T  41964779 tttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaacaatcttgattgtaaaaagtcttt--------------taa 41964694  T
Q  200 aatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||| ||||||||||||| ||| ||||||| | |||||||||||    
T  41964693 aatcccacaaaatcaatataattcaacaaagttttttaaaatct 41964650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 1605902 - 1605806
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    |||||||||| |||||||||||||||||||  |||| |||||||||||||||||||        ||||||||||| |||||||||||||||||||||    
T  1605902 ttttaaaatcccacaaaatcaatacaatcctgcaaagtcttttaaaatcttcaagattttttctatcaaaacagtattttaaaatctcaatccaata 1605806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 38806059 - 38805930
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    ||||||||||||||||||||||| ||| ||| | ||||||||||||| | |||||||||||||| | ||| |||||||||||||  ||||        |     
T  38806059 aatcttgattgtaaaaagtcttttaaaaaaa-tcttttaaaatctcatagaatcaatacaatcctaaaaagtcttttaaaatctcaaagactttttctac 38805961  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||| |||||||||||||||||||||||||    
T  38805960 caaaatagtcttttaaaatctcaatccaata 38805930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 223
Target Start/End: Original strand, 42366798 - 42366916
Alignment:
Q  103 aaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaa 200  Q
    ||||||||| ||| |||||||||||||   | ||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||| ||  | |||||||    
T  42366798 aaaatccat-aaagtcctttaaaatct---taataaatctattaaaatcttgcatcaagaatcttgattgtaaaaaatcttttaaaaaatatcttttaaa 42366893  T
Q  201 atctcacaaaatcaatacaatcc 223  Q
    |||||||||||| ||||||||||    
T  42366894 atctcacaaaataaatacaatcc 42366916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 9209860 - 9209946
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttca 246  Q
    |||| ||||||||||||||| ||  || ||||| ||||||||||  |||||||||||| ||||  ||||||||||||||||||||||    
T  9209860 aatcctgattgtaaaaagtcatttgaaaaaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatcttca 9209946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 28620658 - 28620723
Alignment:
Q  184 aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||||| ||||||||||||| |||||||||||||||  ||||||| |||||||||||| ||||    
T  28620658 aaataaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaattttttaaaatctttaaga 28620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 31626256 - 31626342
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| ||||||||||||||||    
T  31626256 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatctt 31626342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 42304853 - 42304790
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||| |||||||||||||||||||||||||||||  ||| | |||||||||||||| ||||    
T  42304853 ataaagtcttttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaatcttaaaga 42304790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 35143064 - 35143166
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| |||||||||||||||||||||||||||||  ||| | |||||||||||||  ||||        ||||||| ||||||||| ||||| ||||||    
T  35143064 aaagtcttttaaaatctcacaaaatcaatacaatcttacagagtcttttaaaatctcaaagatttcttttatcaaaatagtcttttacaatcttaatcca 35143163  T
Q  288 ata 290  Q
    |||    
T  35143164 ata 35143166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 14781386 - 14781254
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  14781386 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 14781287  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  14781286 attaaaatagtcttttaaaatcctaatccaata 14781254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 16365263 - 16365324
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||||| |||||||||||||| ||||    
T  16365263 aaagtcttttaaaatctcacagaatcaatacaatcgcacaaagtcttttaaaatcttaaaga 16365324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 39466772 - 39466640
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| |||||||  || ||||||||||||||| ||||||||||||   ||| | |||||||||||||| ||||            
T  39466772 aatcttgagtgtataaagtcttttaaataaaaagtcttttaaaatctcacagaatcaatacaatatcacagagtcttttaaaatcttaaagacttttttt 39466673  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| | ||||||||||||| |||||||||    
T  39466672 attaaaataatcttttaaaatcttaatccaata 39466640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 44725035 - 44724903
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  44725035 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 44724936  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  44724935 attaaaatagtcttttaaaatcctaatccaata 44724903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 4030582 - 4030491
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  4030582 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 4030491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 4302247 - 4302163
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||| ||||||||||||| ||  || ||||| ||||||||||  ||||| |||||| ||||  ||||||||||||||||||||    
T  4302247 aatcttaattgtaaaaagtcatttgaaaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatctt 4302163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 18305215 - 18305124
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  18305215 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 18305124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 19717119 - 19717028
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  19717119 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 19717028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 20831218 - 20831127
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtat--tttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||||| |||||  ||  |||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  20831218 aatcttgagtgtataaagtctttcacataaaaaatcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 20831127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 289
Target Start/End: Complemental strand, 43307764 - 43307661
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatc 285  Q
    ||||||| ||||||||||||||| ||||||| |||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||| ||||    
T  43307764 ataaagtcttttaaaatctcacagaatcaatccaatctcacacagtcttttaaaatcttaaagactctttttattaaaatagtcttttaaaatcttaatc 43307665  T
Q  286 caat 289  Q
    ||||    
T  43307664 caat 43307661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 17791547 - 17791649
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||||||| | | ||  |||  ||| |||||||||||||||||||| ||||        ||||||| ||||||||||||||||||||||    
T  17791547 aaagtcttttaaaatctcatagagtctttacgctcctacaaaatcttttaaaatctttaagacattttcaatcaaaatagtcttttaaaatctcaatcca 17791646  T
Q  288 ata 290  Q
    |||    
T  17791647 ata 17791649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 290
Target Start/End: Original strand, 10128226 - 10128343
Alignment:
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    ||||||||||  || ||||| ||||||||||||| | | ||  |||||||| |||||||| ||||||||||| ||||        ||||||| | |||||    
T  10128226 aaaagtcttttgaaaaaagtcttttaaaatctcatagagtctttacaatcctacaaaatcatttaaaatcttgaagacttttttaatcaaaataatcttt 10128325  T
Q  273 taaaatctcaatccaata 290  Q
    |||| |||||||||||||    
T  10128326 taaattctcaatccaata 10128343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 18957972 - 18957840
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaag--tattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||   | ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  18957972 aatcttgagtgtataaagtcttttacataaaaattcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 18957873  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  18957872 attaaaatagtcttttaaaatcctaatccaata 18957840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 40012397 - 40012348
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||||||||||||||| ||||||||  ||||| |||||||||||||    
T  40012397 ttttaaaatctcacaaaatcgatacaatctcacaaactcttttaaaatct 40012348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 244
Target Start/End: Complemental strand, 5266843 - 5266793
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||||| ||||||||||||| ||||  ||||| ||||||||||||||    
T  5266843 ttttaaaatcccacaaaatcaatataatctcacaaagtcttttaaaatctt 5266793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 7467393 - 7467454
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||| ||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  7467393 aaagtcttttaaattctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7467454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 10294617 - 10294564
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaa 239  Q
    ||||||| ||||||||||||||| |||||||||||||  ||| | |||||||||    
T  10294617 ataaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaa 10294564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 37857834 - 37857898
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||    
T  37857834 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatc 37857898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 154
Target Start/End: Complemental strand, 18958018 - 18957966
Alignment:
Q  102 taaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttg 154  Q
    |||||||| || |||||||| ||| ||||||| |||||||| |||||||||||    
T  18958018 taaaatcctttgaaatccttaaaagtctatatgataaatcctttaaaatcttg 18957966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 158; Significance: 4e-84; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 52706251 - 52706468
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  52706251 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaattatgcaaagaatcttgattgta 52706350  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||| ||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||| |||||    
T  52706351 aaaaatctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttt 52706450  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  52706451 taaaatctcaatccaata 52706468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 45535620 - 45535837
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45535620 tactgtatctttaaatttattgacccttttaaaatct-taaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 45535718  T
Q  173 aaaagtctttc-aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtctt 271  Q
    ||||||||||| ||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||    
T  45535719 aaaagtctttcaaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaaatcttctaaaatcttcaagattttttctatcaaaacagtctt 45535818  T
Q  272 ttaaaatctcaatccaata 290  Q
    |||||||||||||||||||    
T  45535819 ttaaaatctcaatccaata 45535837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 14389290 - 14389502
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14389290 tgtatctttaaatttattgacccttttaaaatct-taaaaatccattaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgtaaaa 14389388  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |        ||||||||||||||||||    
T  14389389 agtcttttaaa-aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaa 14389487  T
Q  276 aatctcaatccaata 290  Q
    |||||||||||||||    
T  14389488 aatctcaatccaata 14389502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 26882048 - 26881822
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26882048 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 26881949  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||        ||||||    
T  26881948 ttgattgtaaaaagtctttcaaaaaaaatcttttaaaatcccacaaaatcaatacaatccaacaaagtcttctaaaatctttaagattttttctatcaaa 26881849  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    | |||||||||||||||||||||||||    
T  26881848 atagtcttttaaaatctcaatccaata 26881822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 45319329 - 45319555
Alignment:
Q  73 tactgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||||||||||||||         |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||     
T  45319329 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaattctttaaaatctatatcatgaatccattaaaatcttgcaaagaatt 45319428  T
Q  164 ttgattgtaaaaagtctttc-aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaa 262  Q
    |||||||| ||||||||||| ||| ||||| |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||        |||||    
T  45319429 ttgattgt-aaaagtctttcaaaaaaaagtcttttaaaatcccgcaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaa 45319527  T
Q  263 aacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||||||    
T  45319528 aacagtcttttaaaatctcaatccaata 45319555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 39758797 - 39758922
Alignment:
Q  112 taaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaa 209  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||              |||||||||| |||||    
T  39758797 taaagtcctttaaaatctatattataaatccattaaaattttgcattgagaatcttgattgtaaaaagtc--------------ttttaaaatcccacaa 39758882  T
Q  210 aatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  39758883 aatcaatacaatccaacaaagtcttttaaaatctgcaaga 39758922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 112 - 249
Target Start/End: Original strand, 39764151 - 39764276
Alignment:
Q  112 taaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaa 209  Q
    |||| ||||||||||||||||| |||||||||||||||| |||||   ||||||||||||||||||||||              |||||||||| |||||    
T  39764151 taaagtcctttaaaatctatattataaatccattaaaattttgcattgagaatcttgattgtaaaaagtc--------------ttttaaaatcccacaa 39764236  T
Q  210 aatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  39764237 aatcaatacaatccaacaaagtcttttaaaatctgcaaga 39764276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 249
Target Start/End: Original strand, 19894776 - 19894863
Alignment:
Q  162 tcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||||||||||||| ||  |||||||| |||||||||  ||||||||||||| ||||  |||||||||||||||||||| ||||    
T  19894776 tcttgattgtaaaaagtcctttgaataaagttttttaaaattccacaaaatcaatataatcacacaaaatcttttaaaatctttaaga 19894863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 1923505 - 1923375
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    |||| ||||||||||||||| ||  || ||||| ||||||||||  ||||| |||||| ||||  |||||||||||||||||||||||||              
T  1923505 aatcctgattgtaaaaagtcatttgaaaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatcttcaagattttgtttgc 1923406  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||| | |||||||||||||||||||||||    
T  1923405 caaaataatcttttaaaatctcaatccaata 1923375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 48198932 - 48198994
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  48198932 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 48198994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 48207515 - 48207577
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  48207515 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 48207577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 49231940 - 49232031
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  |||||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  49231940 aatcttgagtgtataaagtcttttacataaaaagtattttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 49232031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 6313532 - 6313664
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  6313532 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 6313631  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  6313632 attaaaatagtcttttaaaatcctaatccaata 6313664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 25613048 - 25613180
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  25613048 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 25613147  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  25613148 attaaaatagtcttttaaaatcctaatccaata 25613180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 29395676 - 29395544
Alignment:
Q  160 aatcttgattgtaaaaagtcttt--caaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| |||||||||  || | ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  29395676 aatcttgagtgtataaagtcttttgcataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 29395577  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  29395576 attaaaatagtcttttaaaatcctaatccaata 29395544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 28386697 - 28386606
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || |||||||||||||||||||||||| ||||  ||| | |||||||||||||| ||||    
T  28386697 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaatcaatagaatctcacacagtcttttaaaatcttaaaga 28386606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 51702550 - 51702641
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  51702550 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 51702641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 5494396 - 5494310
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||||| || ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  5494396 aatcttgattatataaagtcttttacataaaaagtgttttaaaatctcacataatcaatacaatctcacagagtcttttaaaatctt 5494310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 9321728 - 9321667
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  9321728 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 9321667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 20111790 - 20111729
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| ||||| |||||||  ||||| |||||||||||||| ||||    
T  20111790 aaagtcttttaaaatctcacagaatcagtacaatctcacaaagtcttttaaaatcttaaaga 20111729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 29220098 - 29220159
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  29220098 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 29220159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 51826069 - 51826008
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| |||||||||  ||||||||||||||||||  ||||| |||||||||||||| ||||    
T  51826069 aaagtcttttaaaatgccacaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 51826008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 28038471 - 28038388
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||| ||||||||||||||| || ||| ||||| ||||||||||  | |||||||||| |||   ||||| |||||||||||||    
T  28038471 aatcctgattgtaaaaagtcatttaaaaaaagtcttttaaaatcctataaaatcaatataatttcacaaagtcttttaaaatct 28038388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 46328922 - 46329007
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||| ||||||    
T  46328922 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttgaaatct 46329007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 38535365 - 38535309
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||| ||||||||||||| | ||||||||||||| |||| |  |||||||||||||    
T  38535365 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatctt 38535309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 38557583 - 38557527
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||| ||||||||||||| | ||||||||||||| |||| |  |||||||||||||    
T  38557583 aaagtcttttaaaatctcatagaatcaatacaatctaacacagacttttaaaatctt 38557527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 73 - 289
Target Start/End: Complemental strand, 6288779 - 6288563
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  6288779 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctataacataaatccaataaaatcttgcaaagaatcttgattgta 6288680  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||| || |        |||||||||||||||    
T  6288679 aaaagtcttttaaaaaaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatctttaaaaaaatttctatcaaaacagtcttt 6288580  T
Q  273 taaaatctcaatccaat 289  Q
    |||||||||||||||||    
T  6288579 taaaatctcaatccaat 6288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 290
Target Start/End: Original strand, 29941756 - 29941969
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  29941756 tgtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgtaaagaatcttgattgtaaaa 29941854  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  29941855 agtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaa 29941954  T
Q  276 aatctcaatccaata 290  Q
    |||||||||||||||    
T  29941955 aatctcaatccaata 29941969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 45547769 - 45547995
Alignment:
Q  73 tactgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  45547769 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcttttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 45547868  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  45547869 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 45547968  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  45547969 acagtcttttaaaatctcaatccaata 45547995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 76 - 288
Target Start/End: Complemental strand, 35171614 - 35171389
Alignment:
Q  76 tgtatctttaaatttattgacccttttaa---------aatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttg 166  Q
    |||||||||||||||||| ||||||||||         ||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| |||    
T  35171614 tgtatctttaaatttattaacccttttaaaatcttaaaaatccattaaaatcctttaaaatttatatcatgaatccattaaaattttgcaaagaattttg 35171515  T
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatcc----aacaaaatcttttaaaatcttcaagannnnnnnnatcaa 262  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||    ||| || |||||||||||||||||||        |||||    
T  35171514 attgtaaaaagtcttttaaaaaaagtcttttaaaatctcacaaaatcaatacaatccaacgaacgaagtcttttaaaatcttcaagattttttctatcaa 35171415  T
Q  263 aacagtcttttaaaatctcaatccaa 288  Q
    ||||||||||||||||||||||||||    
T  35171414 aacagtcttttaaaatctcaatccaa 35171389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 76 - 243
Target Start/End: Complemental strand, 42626629 - 42626455
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttg 166  Q
    |||||||||||||||||||||||||||||||||         | |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||     
T  42626629 tgtatctttaaatttattgacccttttaaaatcttaaaaatccgttaaaatcctttaaaatctatatcatgaatccatcaaaatcttgcaaaaaatctta 42626530  T
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||||||||||||||| ||||| ||||||||||  |  ||||||||||||||||  | |||||||||||||||    
T  42626529 attgtaaaaagtctttcaaaaaaagtcttttaaaatcctaataaatcaatacaatcca--ataatcttttaaaatct 42626455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 96 - 290
Target Start/End: Complemental strand, 7487142 - 7486963
Alignment:
Q  96 cccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtatt 195  Q
    |||||||||||||  | ||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||              ||    
T  7487142 cccttttaaaatct-taaaaatccattaaaatctatatcgtgaatccattaaaatcttgcaaagaatcttgattgtaaaaagtc--------------tt 7487058  T
Q  196 ttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||        |||||||| ||||||||||||||||||||||||    
T  7487057 ttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacggtcttttaaaatctcaatccaata 7486963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 103 - 290
Target Start/End: Complemental strand, 36597837 - 36597651
Alignment:
Q  103 aaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaa 200  Q
    |||||||  ||||||||||||||||||   | |||||| || ||||||||||||  || |||||| |||||||||||||||| ||| || || |||||||    
T  36597837 aaaatcccataaaatcctttaaaatct---taataaattcagtaaaatcttgcatcaaaaatcttaattgtaaaaagtcttttaaaaaatgtcttttaaa 36597741  T
Q  201 atctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |        ||||||| |||| |||||||||||| |||||||    
T  36597740 atctcacaaaatcaatacaattcatcaaaatcttttaaaatcttcaaaaaaaattctatcaaaatagtcctttaaaatctcattccaata 36597651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 14919919 - 14919805
Alignment:
Q  135 ataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatc 232  Q
    |||||| |||||||||||||||  |||||||||||||||||||| ||||| ||| || || ||||||||| |||||||||||||||||||||||||||||    
T  14919919 ataaattcattaaaatcttgcatcaagaatcttgattgtaaaaaatcttttaaaaaatgtcttttaaaatttcacaaaatcaatacaatccaacaaaatc 14919820  T
Q  233 ttttaaaatcttcaa 247  Q
    ||||||||| |||||    
T  14919819 ttttaaaattttcaa 14919805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 45497469 - 45497544
Alignment:
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  45497469 attgtaaaaagtcttttaaataaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45497544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 167 - 242
Target Start/End: Original strand, 45505211 - 45505286
Alignment:
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  45505211 attgtaaaaagtcttttaaataaagtcttttaaaatctcaaaaaatcaatacaatcacacaaaatcttttaaaatc 45505286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 2289202 - 2289323
Alignment:
Q  129 tatatcataaatccattaaaatcttgca-aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaaca 227  Q
    ||||| ||||||||||||||||| ||   || |||||||||||||||||||| ||  |||||||| ||||||||||   ||||||||||||||||  |||    
T  2289202 tatattataaatccattaaaatcctgattaaaaatcttgattgtaaaaagtcctttcaataaagtcttttaaaatccatcaaaatcaatacaatcacaca 2289301  T
Q  228 aaatcttttaaaatcttcaaga 249  Q
    || |||||||||||||| ||||    
T  2289302 aagtcttttaaaatctttaaga 2289323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 27979847 - 27979977
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    |||||||||| |||||||||||| ||||||||| ||||||| || || ||||| |||||||||  ||||| |||||||||||||| ||||              
T  27979847 aatcttgattataaaaagtcttttaaataaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaagattatttttga 27979946  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||| ||||| |||||||||||||||||    
T  27979947 caaaacaatctttcaaaatctcaatccaata 27979977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 28066377 - 28066507
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    |||||||||| |||||||||||| ||||||||| ||||||| || || ||||| |||||||||  ||||| |||||||||||||| ||||              
T  28066377 aatcttgattataaaaagtcttttaaataaagtcttttaaattcccataaaattaatacaatcacacaaagtcttttaaaatctttaagattatttttga 28066476  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||| ||||| |||||||||||||||||    
T  28066477 caaaacaatctttcaaaatctcaatccaata 28066507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 249
Target Start/End: Complemental strand, 36599328 - 36599192
Alignment:
Q  112 taaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaa 209  Q
    |||| |||||||||||||   | |||||| || ||||||||| ||  ||||||||| |||||||||||||||| ||| ||| | |||||||||  || ||    
T  36599328 taaagtcctttaaaatct---taataaattcagtaaaatctttcatcaagaatcttaattgtaaaaagtcttttaaaaaaaatcttttaaaataccataa 36599232  T
Q  210 aatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| |  ||| |||||||||||||||||||    
T  36599231 aatcaatataatcgattaaagtcttttaaaatcttcaaga 36599192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 34027913 - 34027824
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||| ||||||||||||||| || ||| ||||| ||||||||||  ||||| |||||| ||||  |||||||| ||||||||||||||||    
T  34027913 aatcctgattgtaaaaagtcatttaaaaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcctttaaaatcttcaaga 34027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 20156712 - 20156630
Alignment:
Q  165 tgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    ||||||||||||||| ||  || ||||| ||||||||||  ||||| |||||| ||||  |||||||||||||||||||||||    
T  20156712 tgattgtaaaaagtcatttgaaaaaagtcttttaaaatccaacaaagtcaatataatctcacaaaatcttttaaaatcttcaa 20156630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 18178228 - 18178360
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  18178228 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 18178327  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  18178328 attaaaatagtcttttaaaatcctaatccaata 18178360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 25289111 - 25289243
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  25289111 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagatttttttt 25289210  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  25289211 attaaaatagtcttttaaaatcctaatccaata 25289243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 26789741 - 26789873
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  26789741 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 26789840  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  26789841 attaaaatagtcttttaaaatcctaatccaata 26789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 13832807 - 13832716
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  13832807 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 13832716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 3464571 - 3464634
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||| |||||||||||||||||||||||| ||||  ||| | |||||||||||||| ||||    
T  3464571 ataaagtcttttaaaatctcacaaaatcaatagaatctgacacagtcttttaaaatcttaaaga 3464634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 38821359 - 38821301
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttca 246  Q
    ||||| ||||||||||  |||||||||||| ||||  ||||||||||||||||||||||    
T  38821359 aaagtcttttaaaatccaacaaaatcaatataatctcacaaaatcttttaaaatcttca 38821301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 7487354 - 7487321
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaa 106  Q
    ||||||||||||||||||||||||||||||||||    
T  7487354 tactgtatctttaaatttattgacccttttaaaa 7487321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Complemental strand, 21735845 - 21735793
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatct 129  Q
    |||||||||||||||||||||||||||||||| | | ||||||| |||||||||    
T  21735845 tgtatctttaaatttattgacccttttaaaat-cttaaaaatccattaaaatct 21735793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 28845534 - 28845666
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||| |||||||| ||||            
T  28845534 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtctttaaaaatcttaaagacttttttt 28845633  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  28845634 attaaaatagtcttttaaaatcctaatccaata 28845666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 33136550 - 33136641
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||| | |||||||||||||  ||| | |||||||||||||| ||||    
T  33136550 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 33136641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Original strand, 43079475 - 43079530
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  43079475 ttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 43079530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 7027860 - 7027952
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa---gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||   || | ||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  7027860 aatcttgagtgtataaagtcttttacataaaaaagtctattaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7027952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 24192730 - 24192669
Alignment:
Q  229 aatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||| |        ||||||| |||||||||||||||||||||||||    
T  24192730 aatcttttaaaatcttcaaaactttttttatcaaaatagtcttttaaaatctcaatccaata 24192669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 20666 - 20453
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  20666 tgtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaacaatcttgattgtaaaa 20568  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  20567 agtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaa 20468  T
Q  276 aatctcaatccaata 290  Q
    |||||||||||||||    
T  20467 aatctcaatccaata 20453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 29864971 - 29864758
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  29864971 tgtatctttaaatttattgacccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaacaatcttgattgtaaaa 29864873  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||    
T  29864872 agtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaa 29864773  T
Q  276 aatctcaatccaata 290  Q
    |||||||||||||||    
T  29864772 aatctcaatccaata 29864758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 3109582 - 3109356
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatcca---------ttaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3109582 tactgtatctttaaatttattgacccttttaaaatcttaaaaatctgttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 3109483  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    || |||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  3109482 ttaattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 3109383  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  3109382 acagtcttttaaaatctcaatccaata 3109356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 75 - 290
Target Start/End: Complemental strand, 6475973 - 6475749
Alignment:
Q  75 ctgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatctt 165  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||| |||||||| ||| ||||||||||    
T  6475973 ctgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatcaattaaaatattgaaaagaatctt 6475874  T
Q  166 gattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaac 265  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||    
T  6475873 gattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaac 6475774  T
Q  266 agtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||| |||||    
T  6475773 agtcttttaaaatctcaattcaata 6475749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 7104509 - 7104571
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  7104509 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 7104571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 8790121 - 8790059
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| ||||    
T  8790121 taaagtcttttaaaatctcacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 8790059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 7498076 - 7498137
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  7498076 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 7498137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 10262938 - 10262854
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||||||||||||||  ||  || ||||||||||||||||  ||| |||||||| ||||  ||||| ||||||||||||||    
T  10262938 aatcttgattgtaaaaagttattttaaaaaagtattttaaaatccaacataatcaatataatctcacaaagtcttttaaaatctt 10262854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 34774341 - 34774432
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  34774341 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatcttaaaga 34774432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 5958005 - 5958088
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||||||||||||||| ||  |||||| | ||||||||||   ||||||||||| ||||  ||||| |||||||||||||    
T  5958005 aatcttgattgtaaaaagtcctttgaataaaatcttttaaaatccatcaaaatcaatataatcacacaaagtcttttaaaatct 5958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 30384310 - 30384224
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  30384310 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctt 30384224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 14261659 - 14261598
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  14261659 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 14261598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 31896593 - 31896725
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | | |||||||||||| ||||            
T  31896593 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtattttaaaatcttaaagacttttttt 31896692  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  31896693 attaaaatagtcttttaaaatcctaatccaata 31896725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 4199696 - 4199640
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  4199696 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctt 4199640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 31068406 - 31068508
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||| ||||| |||||||||||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||  ||||||    
T  31068406 aaagtcttttaaaatatcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 31068505  T
Q  288 ata 290  Q
    |||    
T  31068506 ata 31068508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 27585293 - 27585232
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||| ||||  ||| | |||||||||||||| ||||    
T  27585293 aaagtcttttaaaatctcacagaatcaataaaatctcacacagtcttttaaaatcttaaaga 27585232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 3e-82; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 11632918 - 11632692
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11632918 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 11632819  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  11632818 ttgattgtaaaaagtctttcaaaaaaagtattttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 11632719  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  11632718 acagtcttttaaaatctcaatccaata 11632692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 13950023 - 13949807
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13950023 tactgtatctttaaatttattgaccctttgaaaa-cctttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 13949925  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||    
T  13949924 aaaagtctttcaaaaaaagtcttttataatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttt 13949825  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  13949824 taaaatctcaatccaata 13949807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 103 - 290
Target Start/End: Original strand, 10553629 - 10553816
Alignment:
Q  103 aaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaat 202  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  10553629 aaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgtaaaaagtctttcaaaaaaagtcttttaaaat 10553728  T
Q  203 ctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||    
T  10553729 cccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatccaata 10553816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 40411271 - 40411498
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40411271 tactgtatctttaaatttattgacccttttaaaatctttaaaattcattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 40411370  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga-nnnnnnnnatcaa 262  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||         |||||    
T  40411371 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttttttctatcaa 40411470  T
Q  263 aacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||||||||||||||||    
T  40411471 aacagtcttttaaaatctcaatccaata 40411498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 290
Target Start/End: Complemental strand, 3603667 - 3603466
Alignment:
Q  76 tgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgtaaaa 175  Q
    |||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||| |||||||||||||||||            |||||||||    
T  3603667 tgtatctttaaatttattgacccttttaaaatct-taaaaatccattaaaatctatatcatgaatccattaaaatcttg------------attgtaaaa 3603581  T
Q  176 agtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaa 275  Q
    ||||||||||| ||| | |||||||||  ||||||||||||||||||||||||| ||||||||||||||||| |        ||||||||||||||||||    
T  3603580 agtctttcaaaaaaaatcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaaaaaaatttctatcaaaacagtcttttaa 3603481  T
Q  276 aatctcaatccaata 290  Q
    ||| |||||| ||||    
T  3603480 aatttcaatctaata 3603466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 156 - 290
Target Start/End: Complemental strand, 10553579 - 10553445
Alignment:
Q  156 aaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnn 255  Q
    |||||||||||||||||||||||||||||||     | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||          
T  10553579 aaagaatcttgattgtaaaaagtctttcaaaattttttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagatttttt 10553480  T
Q  256 nnatcaaaacagtcttttaaaatctcaatccaata 290  Q
      |||||||||||||||| ||||||||||||||||    
T  10553479 ctatcaaaacagtctttttaaatctcaatccaata 10553445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 288
Target Start/End: Complemental strand, 18677084 - 18676939
Alignment:
Q  144 ttaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||| |  || |||||||||| |||||||||| |||||| |||||||||||||||||||    
T  18677084 ttaaaatcttgcatcaagaatcttgattgtaagaagtcttttaaaaactgt-ttttaaaatcccacaaaatcactacaatacaacaaaatcttttaaaat 18676986  T
Q  242 cttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaa 288  Q
    ||||||||        ||||||| |||||||||||||||||||||||    
T  18676985 cttcaagattttttctatcaaaatagtcttttaaaatctcaatccaa 18676939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 26629648 - 26629518
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    ||||||||||||||||||||||| |||  |||| ||||||||||||| | | ||  |||||||| ||||||||||||||||| |||||||        ||    
T  26629648 aatcttgattgtaaaaagtcttttaaaacaagtcttttaaaatctcatagagtctttacaatcctacaaaatcttttaaaattttcaagactttttcaat 26629549  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||| |||||||||||||||||||||||||    
T  26629548 caaaatagtcttttaaaatctcaatccaata 26629518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 290
Target Start/End: Original strand, 13717052 - 13717183
Alignment:
Q  161 atcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnna 258  Q
    ||||||| |||| ||||||||| | |||||  || |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||        |    
T  13717052 atcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaagacttttttta 13717151  T
Q  259 tcaaaacagtcttttaaaatctcaatccaata 290  Q
    | |||| ||||||||||||||  |||||||||    
T  13717152 ttaaaatagtcttttaaaatcctaatccaata 13717183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 32828022 - 32827937
Alignment:
Q  102 taaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgca--aagaatcttgattgtaaaaagtctttcaaa 186  Q
    |||| ||| |||||||| || ||||||||||| ||||||||||||||||| ||||  | ||||||||||||||||||||||||||||    
T  32828022 taaagtcctttaaaatc-ttaaaaatctatattataaatccattaaaatcatgcattaggaatcttgattgtaaaaagtctttcaaa 32827937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 249
Target Start/End: Complemental strand, 2275463 - 2275316
Alignment:
Q  102 taaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgca-aagaatcttgattgtaaaaagtctttcaaataaagtattttaaa 200  Q
    |||||||| |||||||| || ||| | ||||| |||||| |||||||||| ||   || |||||||| ||||||||||| ||  |||||||| ||||| |    
T  2275463 taaaatcctttaaaatc-ttaaaagtttatattataaattcattaaaatcctgattaaaaatcttgactgtaaaaagtcctttgaataaagtcttttaga 2275365  T
Q  201 atctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||   ||||||||||||||||  ||||| |||||||||||||| ||||    
T  2275364 atccatcaaaatcaatacaatcacacaaagtcttttaaaatctttaaga 2275316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 1151508 - 1151447
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  1151508 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 1151447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 4549474 - 4549413
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  4549474 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 4549413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 1459434 - 1459343
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  1459434 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 1459343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 13999353 - 13999262
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  13999353 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 13999262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 40012956 - 40012865
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || |||||||||||||||||||||||||||||  |||   |||||||||||||| ||||    
T  40012956 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaatcaatacaatctcacactgtcttttaaaatcttaaaga 40012865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 10572243 - 10572305
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||||||||||||| ||| ||||| |||||| |||||||| |||||||| ||||    
T  10572243 aatcttgagtgtaaaaagtcttttaaaaaaagtcttttaatatctcacagaatcaatagaatc 10572305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 39853308 - 39853393
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||    
T  39853308 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacagagtcttttaaaatct 39853393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 5950074 - 5950160
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||| |||| ||||||||| | |||||  ||  |||||||||||||| |||||||||||||  ||| ||| ||||||||||||    
T  5950074 aatcttgagtgtataaagtcttttacataaaaagtcatttaaaatctcacagaatcaatacaatctcacataatattttaaaatctt 5950160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 13926918 - 13926979
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||| ||||||| ||||    
T  13926918 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtctttttaaatcttaaaga 13926979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 7947272 - 7947181
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtat--tttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  ||  |||||||||||||| |||||||||||||  |||   |||||||||||||| ||||    
T  7947272 aatcttgagtgtataaagtcttttacataaaaaatcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaaga 7947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 43056910 - 43056694
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43056910 tactgtatctttaaatttattgatccttttaaaatct-ttaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 43056812  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||| |||||    
T  43056811 aaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacattcttt 43056712  T
Q  273 taaaatctcaatccaata 290  Q
    |||||||||||| |||||    
T  43056711 taaaatctcaattcaata 43056694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 73 - 283
Target Start/End: Complemental strand, 35089329 - 35089110
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  35089329 tactgtatctttaaatttattgacccttttaaaatctttaaaattcattaaaatcctttaaaatctatatcatgaatctattaaaatcttgcaaagaatc 35089230  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  35089229 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatctcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 35089130  T
Q  264 acagtcttttaaaatctcaa 283  Q
    ||||||||||||||||||||    
T  35089129 acagtcttttaaaatctcaa 35089110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 152715 - 152941
Alignment:
Q  73 tactgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  152715 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaacaatc 152814  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  152815 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 152914  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  152915 acagtcttttaaaatctcaatccaata 152941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 12252618 - 12252392
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  12252618 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaattttgcaaagaatc 12252519  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  12252518 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 12252419  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    ||| |||||||||||||||||||||||    
T  12252418 acaatcttttaaaatctcaatccaata 12252392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 30111647 - 30111873
Alignment:
Q  73 tactgtatctttaaatttattgaccctttta---------aaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  30111647 tactgtatctttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttggaaagaatc 30111746  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  30111747 ttgattgtaaaaagtctttgaaaaaaagttttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 30111846  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    | |||||||||||||||||||||||||    
T  30111847 atagtcttttaaaatctcaatccaata 30111873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 27417880 - 27417654
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27417880 tactgtatctttaaatttattgacccttttaaaatcttacaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 27417781  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||| |||||| |||||||||||||||||||        ||||||    
T  27417780 ttgattgtaaaaagtctttgaaaaaaagtcttttaaaatcccacaaaatcaatacaatctaacaaagtcttttaaaatcttcaagattttttctatcaaa 27417681  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    | | |||||||||||||||||||||||    
T  27417680 atactcttttaaaatctcaatccaata 27417654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 33475393 - 33475617
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         ||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||    
T  33475393 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatatatatcatgaatcgattaaagtcttgcaaagaatc 33475492  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    |||||||||||  |||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  33475493 ttgattgtaaa--gtctttcaaaaaaagtcttttaaaatttcacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 33475590  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||| ||||    
T  33475591 acagtcttttaaaatctcaatcaaata 33475617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 47912632 - 47912530
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  47912632 aaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaacagtcttttaaaatctcaatcca 47912533  T
Q  288 ata 290  Q
    |||    
T  47912532 ata 47912530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 42677376 - 42677294
Alignment:
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| |||||||||| ||||||||| |||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||    
T  42677376 attgtgaaaagtcttttaaataaagtcttttaaaattccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 42677294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 29893912 - 29894003
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||    
T  29893912 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaatcaatacaatctcacacaatcttttaaaatcttaaaga 29894003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 28343266 - 28343398
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  28343266 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 28343365  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| |||||||||||||| ||||||||||    
T  28343366 attaaaatagtcttttaaaatcccaatccaata 28343398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 18839250 - 18839341
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  18839250 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 18839341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 242
Target Start/End: Original strand, 26183079 - 26183134
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  26183079 taaagtcttttaaaatctcacataatcaatacaatcccacaaagtcttttaaaatc 26183134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 30889273 - 30889145
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    ||||||||||||| |||||||||||||||||  || ||||||||||| | |||||| | ||||| || || |||||||||||||  ||||        |     
T  30889273 aatcttgattgtagaaagtctttcaaataaa--atcttaaaatctcatagaatcaacataatcctaccaagtcttttaaaatctcaaagattttttctac 30889176  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||| |||||||||| ||||||||||    
T  30889175 caaaacagttttttaaaatcccaatccaata 30889145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 34114677 - 34114547
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnat 259  Q
    |||| ||||||| | |||||||| ||| ||||| ||||||||||   ||||||||||||||||  ||||| |||||||||||||| ||||              
T  34114677 aatcctgattgtgagaagtcttttaaacaaagtcttttaaaatccttcaaaatcaatacaatcacacaaagtcttttaaaatctttaagattttttctgc 34114578  T
Q  260 caaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||| |||||| ||||||||||    
T  34114577 caaaacagtctttcaaaatcccaatccaata 34114547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 23102247 - 23102379
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  23102247 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 23102346  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  23102347 attaaaatagtcttttaaaatcctaatccaata 23102379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 33891485 - 33891401
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    |||||||| |||||||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||||||||||    
T  33891485 aatcttgagtgtaaaaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacatagtcttttaaaatc 33891401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 244
Target Start/End: Complemental strand, 46035559 - 46035502
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||    
T  46035559 taaagtcttttaaaatctcacagaatcaatacaattccacaaagtcttttaaaatctt 46035502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 510602 - 510693
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  510602 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 510693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 3023881 - 3023967
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  3023881 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctt 3023967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 29614044 - 29613952
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa---gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||   || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  29614044 aatcttgagtgtataaagtcttttacataaaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 29613952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 48136470 - 48136368
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||||||||| |||||||||||||  ||| ||| |||||||||||| ||||        || |||| ||||||||||||||  ||||||    
T  48136470 aaagtcttttaaaatctcacagaatcaatacaatctcacacaatattttaaaatcttgaagattttttttattaaaatagtcttttaaaatcctaatcca 48136371  T
Q  288 ata 290  Q
    |||    
T  48136370 ata 48136368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 12741359 - 12741420
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  12741359 aaagtcttttaaaatctcacataatcaatacaatctcacacagtcttttaaaatcttaaaga 12741420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 7994112 - 7994203
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||| ||| |||||||||||||  ||| | |||||||||||||| ||||    
T  7994112 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatcttacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 7994203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 9881538 - 9881447
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||| | |||||||||||||  ||| | |||||||||||||| ||||    
T  9881538 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 9881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 37971616 - 37971512
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatc 285  Q
    ||||||| ||||||||||||||| |||||||||||||  |||   |||||||||||||| ||||        || |||| ||||||||||||||  ||||    
T  37971616 ataaagtcttttaaaatctcacagaatcaatacaatctcacacggtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatc 37971517  T
Q  286 caata 290  Q
    |||||    
T  37971516 caata 37971512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 247
Target Start/End: Original strand, 40098204 - 40098291
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaa 247  Q
    |||| ||||||||||||||| ||  || ||||| |||||||||   | ||| |||||| ||||  |||||||||||||||||||||||    
T  40098204 aatcctgattgtaaaaagtcatttgaaaaaagtcttttaaaattcaagaaagtcaatataatcttacaaaatcttttaaaatcttcaa 40098291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 12893219 - 12893165
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    |||||| ||||||||||||| | |||||||||||||  ||||| |||||||||||    
T  12893219 taaagtcttttaaaatctcatagaatcaatacaatctcacaaagtcttttaaaat 12893165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 28034341 - 28034295
Alignment:
Q  195 tttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    ||||||||||||||||||||||||||||  ||| | |||||||||||    
T  28034341 tttaaaatctcacaaaatcaatacaatctcacacagtcttttaaaat 28034295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Original strand, 30823580 - 30823634
Alignment:
Q  195 tttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  30823580 tttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 30823634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 33383627 - 33383681
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | ||||||||||||    
T  33383627 aaagtcttttaaaatctcacagaatcaatacaatcttacacagtcttttaaaatc 33383681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Complemental strand, 44121168 - 44121134
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatc 222  Q
    ||||| |||||||||||||||||||||||||||||    
T  44121168 aaagtcttttaaaatctcacaaaatcaatacaatc 44121134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 32884739 - 32884800
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| ||||||||||||   ||| | |||||||||||||| ||||    
T  32884739 aaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaaga 32884800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 249
Target Start/End: Original strand, 39029039 - 39029100
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||| ||||| |||||||||||||  ||| ||| |||||||||||| ||||    
T  39029039 aaagtcttttaaaatttcacagaatcaatacaatcttacacaatattttaaaatcttaaaga 39029100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 47067656 - 47067720
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||    
T  47067656 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatc 47067720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 233
Target Start/End: Original strand, 28422530 - 28422590
Alignment:
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatct 233  Q
    |||| ||||| |||||||||||||||||||   |||||||||||| ||||  |||||||||    
T  28422530 aaaaatcttttaaataaagtattttaaaattctacaaaatcaataaaatcatacaaaatct 28422590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 39785052 - 39785143
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||| ||||| |||||||||||||   || | |||||||||||||| ||||    
T  39785052 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatttcacagaatcaatacaatctcgcacagtcttttaaaatcttaaaga 39785143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Complemental strand, 44256002 - 44255946
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatc 242  Q
    ||||||| ||||||||||||| | |||||||||||||  ||| | ||||||||||||    
T  44256002 ataaagtcttttaaaatctcagagaatcaatacaatctcacacagtcttttaaaatc 44255946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 42217670 - 42217454
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  42217670 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctctatcataaatccattaaaatcttgcaaagaatcttgatcgta 42217571  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||| ||| ||| ||||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||        |||||||||||||||    
T  42217570 aaaagtattttaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtc-tttaaaatcttcaagattttttctatcaaaacagtcttt 42217472  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||| ||||    
T  42217471 taaaatctcaatcaaata 42217454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 7820803 - 7821029
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaa---------tccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7820803 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 7820902  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  7820903 ttgattgtaaaaagtctttcaaaaaaagtcttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagaatttttctatcaaa 7821002  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
     ||||||||||||||||||||||||||    
T  7821003 tcagtcttttaaaatctcaatccaata 7821029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 73 - 289
Target Start/End: Complemental strand, 8583233 - 8583008
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaa---------aatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    |||||||| |||||||||||||||||||||||         |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8583233 tactgtatttttaaatttattgacccttttaaaatctttaaaatccattaaaatcctttaaaatctatatcatgaatccattaaaatcttgcaaagaatc 8583134  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  8583133 ttgattgtaaaaagtctttcaaaaaaaatcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 8583034  T
Q  264 acagtcttttaaaatctcaatccaat 289  Q
    ||||||||||||||||||||||||||    
T  8583033 acagtcttttaaaatctcaatccaat 8583008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 3435050 - 3434833
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||    
T  3435050 tactgtatctttaaatttatcgacccttttaaaattcattaaaatcctttaaaatctataccatgaatccattaaaatcttgcaaacaatcttgattgta 3434951  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||| | |||||||||  ||||||||||||||||||||||||| |||||||||||||||||||        || |||| |||||||    
T  3434950 aaaagtctttcaaaaaaaatcttttaaaattccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctattaaaatagtcttt 3434851  T
Q  273 taaaatctcaatccaata 290  Q
    |||||||||||| |||||    
T  3434850 taaaatctcaattcaata 3434833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 56398903 - 56399119
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaa-gaatcttgattgt 171  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  56398903 tactgtatctttaaatttattgacccttttaaaatct-taaaaatccattaaaatctatatcatgaatcctttaaaatcttgcaaaagaatcttgattgt 56399001  T
Q  172 aaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtctt 271  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||| |        |||||||| |||||    
T  56399002 aaaaagtctttcaaaaaaagtttttaaaaatctcacaaaatcaataaaattcaacaaagtcttttaaaatcttcaa-aaaatttctatcaaaacggtctt 56399100  T
Q  272 ttaaaatctcaatccaata 290  Q
    ||||||||||||| |||||    
T  56399101 ttaaaatctcaattcaata 56399119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 42315748 - 42315962
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatc---------cattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatc 163  Q
    ||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||| ||| ||||||||||||||                
T  42315748 tactgtatctttaaatttattgacccttttaaaatcttaaaaatccattaaaatcctttaaaatctataccatgaatccattaaaatc------------ 42315835  T
Q  164 ttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaa 263  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||    
T  42315836 ttgattgtaaaaagtctttcaaaaaaagtgttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaa 42315935  T
Q  264 acagtcttttaaaatctcaatccaata 290  Q
    |||||||||||||||||||||||||||    
T  42315936 acagtcttttaaaatctcaatccaata 42315962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 73 - 290
Target Start/End: Original strand, 7808876 - 7809078
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaa-tcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgt 171  Q
    |||||||||||||| |||||||||||||||||||||  |||||| ||| |||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  7808876 tactgtatctttaattttattgacccttttaaaatc--ttaaaactccattaaaatctatatcatgactccattaaaatcttgcaaagaatcttgattgt 7808973  T
Q  172 aaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtctt 271  Q
    ||||||||              ||||||||||  |||||||||||||||||||||||| |||||||||||||||||||        |||||| |||||||    
T  7808974 aaaaagtc--------------ttttaaaatcctacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaccagtctt 7809059  T
Q  272 ttaaaatctcaatccaata 290  Q
    |||||||||||||||||||    
T  7809060 ttaaaatctcaatccaata 7809078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 156 - 290
Target Start/End: Original strand, 44930559 - 44930689
Alignment:
Q  156 aaagaatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnn 255  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||  || ||||||||||||    |||||| |||||||||||||| ||||          
T  44930559 aaagaatcttgattgtagaaagtctttcaaaaaaagtcttttaaaattccataaaatcaataca----aacaaagtcttttaaaatctttaagatttttt 44930654  T
Q  256 nnatcaaaacagtcttttaaaatctcaatccaata 290  Q
      |||||||||||||||||||||||||||||||||    
T  44930655 ttatcaaaacagtcttttaaaatctcaatccaata 44930689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 44647672 - 44647756
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||||||||||||||||||||| ||||||||| | | |||||| ||||||||||| ||||||  ||||| |||||| |||||||    
T  44647672 aatcttgattgtaaaaagtctttaaaataaagtctatcaaaatcccacaaaatcaacacaatcacacaaagtcttttcaaatctt 44647756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Complemental strand, 49834083 - 49834020
Alignment:
Q  186 ataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||| |||||||||||||||||||||||||||||  ||| |||||||||||||||| ||||    
T  49834083 ataaagtcttttaaaatctcacaaaatcaatacaatctcacataatcttttaaaatcttaaaga 49834020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 249
Target Start/End: Original strand, 52110234 - 52110299
Alignment:
Q  184 aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||||| | ||||||||||||| |||||||||||||||  |||||||||||||||||||| ||||    
T  52110234 aaataaaatcttttaaaatctcaaaaaatcaatacaatcgcacaaaatcttttaaaatctttaaga 52110299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 32323025 - 32323116
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  32323025 aatcttgaatgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacaatcttttaaaatcttaaaga 32323116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 38234588 - 38234650
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||| ||||||||||| ||| |||||||||||||| ||||| |||||||||||||| ||||    
T  38234588 taaagtcttttaaaatcttacagaatcaatacaatcccacaaagtcttttaaaatcttaaaga 38234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 27769020 - 27769152
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||            
T  27769020 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagacttttttt 27769119  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  27769120 attaaaatagtcttttaaaatcctaatccaata 27769152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 41726062 - 41726194
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  | | |||||||||||||||| ||||            
T  41726062 aatcttgaatgtataaagtcttttacataaaaagtcttttaaaatctcacataatcaatacaatctcaaacaatcttttaaaatcttaaagacatttttt 41726161  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  41726162 attaaaatagtcttttaaaatcataatccaata 41726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 249
Target Start/End: Complemental strand, 48532029 - 48531968
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| ||||||||||||||| |||||||||||||  ||| |||||||||||||||| ||||    
T  48532029 aaagtcttttaaaatctcacagaatcaatacaatcttacagaatcttttaaaatcttaaaga 48531968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 184 - 244
Target Start/End: Original strand, 25936899 - 25936959
Alignment:
Q  184 aaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||||||||||||||||||| | ||||||||||||||   ||||| ||||||||||||||    
T  25936899 aaataaagtattttaaaatcttaaaaaatcaatacaattacacaaagtcttttaaaatctt 25936959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 54342103 - 54342194
Alignment:
Q  160 aatcttgattgtaaaaagtcttt--caaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| |||||||||  || | ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||    
T  54342103 aatcttgagtgtataaagtcttttgcataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaaga 54342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 5801661 - 5801746
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | |||||||||||||    
T  5801661 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatct 5801746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 23988183 - 23988285
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||  ||||||    
T  23988183 aaagtcttttaaaatctcacagaatcaatacaatctcacatattcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatcca 23988282  T
Q  288 ata 290  Q
    |||    
T  23988283 ata 23988285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Original strand, 48262031 - 48262163
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| ||||||||||||   ||| | |||||||||||||| ||||            
T  48262031 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatttcacacagtcttttaaaatcttaaagacttttttt 48262130  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  48262131 attaaaatagtcttttaaaatcctaatccaata 48262163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 29649268 - 29649177
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||| | |||||||||||||  ||| | |||||||||||||| ||||    
T  29649268 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcatagaatcaatacaatctcacacagtcttttaaaatcttaaaga 29649177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 32683237 - 32683141
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||||||||||| |||||||||||||  ||| | |||||||||||||| ||||        || |||| ||||||||||||||  |||||||||    
T  32683237 ttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaata 32683141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 243
Target Start/End: Original strand, 53272824 - 53272880
Alignment:
Q  187 taaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatct 243  Q
    |||||| ||||||||||||| |||||||||| ||||  ||||| |||||||||||||    
T  53272824 taaagtcttttaaaatctcataaaatcaatagaatcacacaaagtcttttaaaatct 53272880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 290
Target Start/End: Original strand, 5442379 - 5442479
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatcca 287  Q
    ||||| |||||||||||||||||||||||||||||   || | |||||||||||||| ||||        || |||| ||||||||||||||  ||||||    
T  5442379 aaagtcttttaaaatctcacaaaatcaatacaatc--tcacagtcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatcca 5442476  T
Q  288 ata 290  Q
    |||    
T  5442477 ata 5442479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 28484864 - 28484911
Alignment:
Q  194 ttttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    ||||||||||||||||||||||||||||   ||| |||||||||||||    
T  28484864 ttttaaaatctcacaaaatcaatacaatttcacacaatcttttaaaat 28484911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 246
Target Start/End: Original strand, 16654131 - 16654217
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttca 246  Q
    |||| ||||||||||||| | || ||| ||||| |||||||||   ||||| ||| || ||||  ||||||||||||||||||||||    
T  16654131 aatcctgattgtaaaaagacatttaaaaaaagtcttttaaaattcaacaaagtcagtataatctcacaaaatcttttaaaatcttca 16654217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 37916747 - 37916811
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa---gtattttaaaatctcacaaaatcaatacaat 221  Q
    |||||||| |||| ||||||||| | |||||   || ||||||||||||||||||||||||||||    
T  37916747 aatcttgactgtataaagtcttttacataaaaaagtcttttaaaatctcacaaaatcaatacaat 37916811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 47686840 - 47686901
Alignment:
Q  229 aatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||| |||||||||||||        ||||||| |||||||||||||||||||||||||    
T  47686840 aatctttcaaaatcttcaagactttttttatcaaaatagtcttttaaaatctcaatccaata 47686901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 241
Target Start/End: Original strand, 50019177 - 50019230
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaat 241  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | |||||||||||    
T  50019177 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaat 50019230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Complemental strand, 28846208 - 28846176
Alignment:
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    ||||||| |||||||||||||||||||||||||    
T  28846208 atcaaaatagtcttttaaaatctcaatccaata 28846176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 51321812 - 51321903
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||| ||||| |||||||||||||  ||| | || ||||||||||| ||||    
T  51321812 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatttcacagaatcaatacaatctcacatagtcgtttaaaatcttaaaga 51321903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 34038 - 33831
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34038 tactgtatctttaaatttattgacccttttaaaatcc----------tttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 33949  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||| |||||||    
T  33948 aaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttt 33849  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  33848 taaaatctcaatccaata 33831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 73 - 290
Target Start/End: Complemental strand, 81006 - 80799
Alignment:
Q  73 tactgtatctttaaatttattgacccttttaaaatccattaaaatcctttaaaatctatatcataaatccattaaaatcttgcaaagaatcttgattgta 172  Q
    |||||||||||||||||||||||||||||||||||||          ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  81006 tactgtatctttaaatttattgacccttttaaaatcc----------tttaaaatctatatcatgaatccattaaaatcttgcaaagaatcttgattgta 80917  T
Q  173 aaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnnatcaaaacagtcttt 272  Q
    |||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||        ||||||| |||||||    
T  80916 aaaagtctttcaaaaaaagtcttttaaaatcccacaaaatcaatacaatccaacaaagtcttttaaaatcttcaagattttttctatcaaaaaagtcttt 80817  T
Q  273 taaaatctcaatccaata 290  Q
    ||||||||||||||||||    
T  80816 taaaatctcaatccaata 80799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 1067 - 985
Alignment:
Q  167 attgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    ||||| |||||| ||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||    
T  1067 attgtgaaaagttttttaaataaagtcttttaaaatcccacaaaatcaatacaatcacacaaaatcttttaaaatctttaaga 985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 15756 - 15699
Alignment:
Q  165 tgattgtaaaaagtctttcaaataaagtattttaaaatctcacaaaatcaatacaatc 222  Q
    ||||||| |||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  15756 tgattgtgaaaagtcttttaaataaagtcttttaaaatctcaaaaaatcaatacaatc 15699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 290
Target Start/End: Complemental strand, 3712 - 3580
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaagannnnnnnn 257  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||  ||| | ||| |||||||||| ||||            
T  3712 aatcttgagtgtataaagtcttttacataaaaagttttttaaaatctcacagaatcaatacaatctcacacagtctcttaaaatcttaaagacttttttt 3613  T
Q  258 atcaaaacagtcttttaaaatctcaatccaata 290  Q
    || |||| ||||||||||||||  |||||||||    
T  3612 attaaaatagtcttttaaaatcctaatccaata 3580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 36539 - 36448
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||| ||||  ||| | |||||||||||||| ||||    
T  36539 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatataatctcacacagtcttttaaaatcttaaaga 36448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 57278 - 57222
Alignment:
Q  188 aaagtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatctt 244  Q
    ||||| ||||||||||||||| |||||||||||||  ||| | ||||||||||||||    
T  57278 aaagtcttttaaaatctcacagaatcaatacaatctcacacagtcttttaaaatctt 57222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 16286 - 16222
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||    
T  16286 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatc 16222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 20513 - 20449
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||    
T  20513 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatc 20449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 29288 - 29352
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatc 222  Q
    |||||||| |||| ||||||||| | |||||  || ||||||||||||||| |||||||||||||    
T  29288 aatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacagaatcaatacaatc 29352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 249
Target Start/End: Complemental strand, 3252 - 3161
Alignment:
Q  160 aatcttgattgtaaaaagtctttcaaataaa--gtattttaaaatctcacaaaatcaatacaatccaacaaaatcttttaaaatcttcaaga 249  Q
    |||||||| |||| ||||||||| | |||||  || | ||||||||||||| ||| |||||||||  ||| | |||||||||||||| ||||    
T  3252 aatcttgagtgtataaagtcttttacataaaaagtctcttaaaatctcacataattaatacaatctcacacagtcttttaaaatcttaaaga 3161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University