View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_low_11 (Length: 526)
Name: NF19103_low_11
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 6 - 507
Target Start/End: Complemental strand, 29854002 - 29853501
Alignment:
| Q |
6 |
aggagcagagatggaaggtacgatatcaaggacagtttctttagaaaagtttgaatgtggttcttgggcttcttctgcactattcaatgacattgaaaca |
105 |
Q |
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|||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29854002 |
aggatcagaaatggaaggtacgatatcaaggacagtttctttagaaaagtttgaatgtggttcttgggcttcttctgcactatttaatgacattgaaaca |
29853903 |
T |
|
| Q |
106 |
gacaacacaagttcctattttgatttaccattggaattgatcaaaggaagtagttataatgatgtacatgcacctgttacatcagcttttgtctttgaga |
205 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29853902 |
gacaacacaagttcctattttgatctaccattggaattgatcaaaggaagtagttataatgatgtacatgcacctgttacatcagcttttgtctttgaga |
29853803 |
T |
|
| Q |
206 |
aggaccttaaaggggttctcaagaatggttcttctagaacaaatgctagaaaatcagatacatcacctcatcatgttaggttttctacatcttctacttc |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
29853802 |
aggaccttaaaggggttctcaagaatggttcttctagaacaaatgctagaaaatcagatacatcaccttatcatgttaggttttctacatcttctacttc |
29853703 |
T |
|
| Q |
306 |
tcattactctccttctccagcatcatgcaatactcctagcttgagaaacacgaaagtcgattttaatgccttcttagaagcgcagagtacttgaggaaat |
405 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29853702 |
tcattactctccctctccagcatcatgcaatactcctagcttgagaaacacgaaagtcgattttaatgccttcttagaagcgcagagtacttgaggaaat |
29853603 |
T |
|
| Q |
406 |
aagagaaattttctctcattagatctaaatcttcttatagttgttgcataatgtagcagctacgggaagattcaaattcaatatttgaggttgagcacga |
505 |
Q |
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|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
29853602 |
aagagaaattttctctcattagatctaaatcttcccatagctattgcataatgtagcagctacggggagattcaaattcaatatttgaggttgagcacga |
29853503 |
T |
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| Q |
506 |
tt |
507 |
Q |
| |
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|| |
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| T |
29853502 |
tt |
29853501 |
T |
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