View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_low_111 (Length: 267)
Name: NF19103_low_111
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_111 |
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Alignment Details
Target: chr7 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 30995408 - 30995661
Alignment:
| Q |
5 |
tatgtactgactcattagacaaagatagagaaaccaatcatgttacatcatgagagatgtacttacaagtttgaacctattaatagatgtgtctctgtaa |
104 |
Q |
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| T |
30995408 |
tatgtactgactcattagacaaagatagagaaaccaatcatgttacatcacgagagatatacttacaagtttgaacctattaatagatgtgtctctgtaa |
30995507 |
T |
|
| Q |
105 |
ggcagatgaggcataattacaacatagaagttttaccgacagggaagtttctatctttgattcaatgtccataacaggtgtaattgatagtataagaaaa |
204 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30995508 |
ggcagatgaggcattattacaacatagaagttttaccgacagggaagtttctatctttgattcaatgtccataacaggtgtaattgatagtataagaaaa |
30995607 |
T |
|
| Q |
205 |
gggtggaaggaaatattgtagctttgaacatttttagtcactctgtagtataat |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30995608 |
gggtggaaggaaatattgtagctttgaacatttttagtcactctgtagtataat |
30995661 |
T |
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