View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_low_151 (Length: 240)

Name: NF19103_low_151
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_low_151
NF19103_low_151
[»] chr2 (50 HSPs)
chr2 (1-240)||(2377194-2377433)
chr2 (104-230)||(9496017-9496148)
chr2 (104-224)||(12734857-12734982)
chr2 (151-224)||(19336945-19337018)
chr2 (105-230)||(45543074-45543203)
chr2 (159-224)||(12141701-12141766)
chr2 (105-213)||(18959079-18959192)
chr2 (112-230)||(33504374-33504498)
chr2 (113-224)||(38430041-38430157)
chr2 (160-230)||(9556430-9556500)
chr2 (104-224)||(2610745-2610870)
chr2 (104-224)||(25834835-25834960)
chr2 (104-224)||(28508835-28508960)
chr2 (103-230)||(31959672-31959804)
chr2 (104-199)||(43573130-43573230)
chr2 (104-198)||(227372-227471)
chr2 (104-198)||(3635323-3635422)
chr2 (106-228)||(8180933-8181060)
chr2 (104-230)||(12882045-12882176)
chr2 (159-230)||(33287572-33287643)
chr2 (159-230)||(37470193-37470264)
chr2 (151-230)||(42149712-42149791)
chr2 (104-229)||(8197541-8197671)
chr2 (104-229)||(8202301-8202431)
chr2 (154-224)||(39029738-39029808)
chr2 (99-187)||(9531595-9531688)
chr2 (161-230)||(26784402-26784471)
chr2 (104-196)||(30306217-30306314)
chr2 (107-224)||(45077884-45078008)
chr2 (160-213)||(45437010-45437063)
chr2 (159-215)||(32402666-32402722)
chr2 (103-138)||(17429298-17429333)
chr2 (163-230)||(21834705-21834772)
chr2 (151-230)||(23915745-23915824)
chr2 (154-237)||(23997747-23997829)
chr2 (165-224)||(26670925-26670984)
chr2 (159-213)||(6219133-6219187)
chr2 (159-221)||(37452286-37452348)
chr2 (103-224)||(38452685-38452811)
chr2 (99-152)||(4807829-4807882)
chr2 (167-224)||(11412865-11412921)
chr2 (103-152)||(12474926-12474975)
chr2 (161-230)||(19235046-19235115)
chr2 (104-141)||(42543480-42543517)
chr2 (104-152)||(12520062-12520110)
chr2 (104-152)||(17670702-17670750)
chr2 (104-136)||(25721364-25721396)
chr2 (104-152)||(38328370-38328418)
chr2 (105-196)||(39709202-39709298)
chr2 (104-152)||(41763043-41763091)
[»] chr3 (46 HSPs)
chr3 (103-230)||(45289090-45289222)
chr3 (104-230)||(49042087-49042219)
chr3 (104-237)||(53519725-53519862)
chr3 (104-230)||(48508386-48508517)
chr3 (159-230)||(49841767-49841838)
chr3 (104-230)||(54128530-54128661)
chr3 (101-229)||(15296059-15296192)
chr3 (151-224)||(36304123-36304196)
chr3 (159-230)||(39600741-39600812)
chr3 (159-221)||(29601052-29601114)
chr3 (104-224)||(12096705-12096830)
chr3 (103-199)||(40106619-40106720)
chr3 (151-211)||(40116390-40116450)
chr3 (104-219)||(52156084-52156204)
chr3 (104-198)||(5169015-5169114)
chr3 (163-230)||(19162652-19162718)
chr3 (112-230)||(19676089-19676212)
chr3 (151-230)||(40116520-40116599)
chr3 (159-230)||(50960697-50960768)
chr3 (159-237)||(19758032-19758109)
chr3 (104-192)||(45374477-45374570)
chr3 (104-224)||(52138957-52139082)
chr3 (160-208)||(38431021-38431069)
chr3 (159-227)||(39235292-39235360)
chr3 (165-209)||(44571599-44571643)
chr3 (104-230)||(45486849-45486983)
chr3 (160-224)||(50237695-50237759)
chr3 (104-198)||(2133612-2133711)
chr3 (102-212)||(11284157-11284272)
chr3 (163-230)||(30294185-30294252)
chr3 (104-198)||(38060897-38060996)
chr3 (187-230)||(46431767-46431810)
chr3 (159-206)||(55244453-55244500)
chr3 (159-237)||(19737129-19737206)
chr3 (183-229)||(26490467-26490513)
chr3 (154-224)||(35033303-35033373)
chr3 (159-213)||(37779045-37779099)
chr3 (104-141)||(23610932-23610969)
chr3 (151-224)||(29475843-29475916)
chr3 (103-152)||(31566160-31566209)
chr3 (159-200)||(39208789-39208830)
chr3 (102-138)||(27192471-27192507)
chr3 (104-152)||(39512777-39512825)
chr3 (154-230)||(42026591-42026667)
chr3 (104-152)||(50249611-50249659)
chr3 (151-231)||(52678902-52678982)
[»] chr7 (58 HSPs)
chr7 (103-230)||(40979927-40980059)
chr7 (104-213)||(36101777-36101891)
chr7 (107-230)||(28627936-28628064)
chr7 (162-237)||(28542007-28542081)
chr7 (151-230)||(38135265-38135344)
chr7 (104-225)||(27648936-27649062)
chr7 (159-213)||(37976403-37976457)
chr7 (151-223)||(1569174-1569246)
chr7 (104-230)||(9210704-9210835)
chr7 (159-230)||(21517440-21517511)
chr7 (151-230)||(36239848-36239927)
chr7 (104-237)||(32631709-32631846)
chr7 (159-208)||(5577547-5577596)
chr7 (104-224)||(11594117-11594242)
chr7 (104-224)||(27893563-27893688)
chr7 (104-224)||(43281831-43281956)
chr7 (104-224)||(45836482-45836607)
chr7 (103-218)||(33731997-33732115)
chr7 (104-230)||(42187592-42187723)
chr7 (104-198)||(2885722-2885821)
chr7 (104-194)||(28208328-28208423)
chr7 (151-230)||(36136915-36136994)
chr7 (104-237)||(38607137-38607274)
chr7 (108-209)||(42969870-42969976)
chr7 (104-224)||(12841275-12841400)
chr7 (104-224)||(22349777-22349902)
chr7 (165-230)||(24549754-24549819)
chr7 (104-224)||(29650541-29650666)
chr7 (159-224)||(35922410-35922475)
chr7 (104-224)||(39906372-39906497)
chr7 (159-230)||(12966167-12966238)
chr7 (159-230)||(14057629-14057700)
chr7 (159-230)||(14367657-14367728)
chr7 (154-213)||(21078085-21078144)
chr7 (163-230)||(45601627-45601694)
chr7 (159-225)||(5418223-5418288)
chr7 (151-229)||(26741946-26742024)
chr7 (157-230)||(28562423-28562497)
chr7 (106-152)||(46355858-46355904)
chr7 (159-213)||(47848841-47848895)
chr7 (114-199)||(47852269-47852359)
chr7 (103-224)||(48919269-48919395)
chr7 (151-228)||(2882788-2882865)
chr7 (104-141)||(20899416-20899453)
chr7 (105-138)||(30914503-30914536)
chr7 (104-224)||(31682602-31682727)
chr7 (169-230)||(32368407-32368468)
chr7 (104-224)||(37618102-37618227)
chr7 (107-152)||(39812172-39812217)
chr7 (104-152)||(5418308-5418356)
chr7 (154-230)||(22174151-22174227)
chr7 (104-152)||(31005439-31005487)
chr7 (104-152)||(31869102-31869150)
chr7 (114-213)||(33103094-33103198)
chr7 (156-224)||(35559050-35559118)
chr7 (152-231)||(40169805-40169884)
chr7 (104-152)||(43491542-43491590)
chr7 (159-230)||(44401187-44401256)
[»] chr1 (56 HSPs)
chr1 (104-230)||(41560380-41560511)
chr1 (105-230)||(29128934-29129065)
chr1 (104-230)||(8796360-8796491)
chr1 (104-230)||(11941580-11941711)
chr1 (99-230)||(38807666-38807802)
chr1 (116-237)||(36623897-36624021)
chr1 (104-210)||(4707221-4707331)
chr1 (104-224)||(25979231-25979356)
chr1 (107-230)||(52532619-52532747)
chr1 (159-230)||(27520267-27520338)
chr1 (159-230)||(40416522-40416593)
chr1 (115-208)||(19908046-19908144)
chr1 (103-224)||(49347392-49347518)
chr1 (105-230)||(52561590-52561720)
chr1 (103-224)||(52921237-52921363)
chr1 (104-224)||(1210902-1211027)
chr1 (104-224)||(30202130-30202255)
chr1 (104-224)||(37311755-37311880)
chr1 (162-222)||(10200369-10200429)
chr1 (104-191)||(28090694-28090786)
chr1 (107-230)||(42501259-42501387)
chr1 (159-223)||(43375658-43375722)
chr1 (159-230)||(3818916-3818987)
chr1 (159-230)||(7762497-7762568)
chr1 (151-230)||(9509469-9509548)
chr1 (159-226)||(29577203-29577269)
chr1 (104-230)||(32404527-32404657)
chr1 (151-230)||(39318280-39318359)
chr1 (188-230)||(8676954-8676996)
chr1 (106-210)||(37462878-37462986)
chr1 (151-220)||(52878351-52878420)
chr1 (164-224)||(4001520-4001580)
chr1 (162-222)||(6025764-6025824)
chr1 (151-206)||(6084150-6084205)
chr1 (159-206)||(13827640-13827687)
chr1 (103-181)||(21769710-21769793)
chr1 (103-205)||(25715325-25715432)
chr1 (188-230)||(8203223-8203265)
chr1 (154-224)||(8672075-8672145)
chr1 (151-229)||(9599446-9599524)
chr1 (158-224)||(10569130-10569196)
chr1 (163-237)||(32082821-32082894)
chr1 (107-224)||(39140672-39140794)
chr1 (159-224)||(990518-990583)
chr1 (151-224)||(19936617-19936690)
chr1 (104-153)||(37099762-37099811)
chr1 (104-137)||(37430420-37430453)
chr1 (102-198)||(40568408-40568509)
chr1 (159-212)||(40920589-40920642)
chr1 (104-188)||(44941776-44941865)
chr1 (103-136)||(50771554-50771587)
chr1 (105-224)||(4590533-4590657)
chr1 (104-152)||(29577486-29577534)
chr1 (154-230)||(38869033-38869109)
chr1 (104-152)||(42539212-42539260)
chr1 (104-152)||(43481798-43481846)
[»] chr8 (36 HSPs)
chr8 (104-213)||(490503-490617)
chr8 (101-210)||(29520820-29520934)
chr8 (101-230)||(45419386-45419520)
chr8 (103-230)||(35914600-35914732)
chr8 (151-211)||(43904717-43904777)
chr8 (104-230)||(2216439-2216568)
chr8 (159-230)||(30559844-30559915)
chr8 (104-224)||(11523723-11523848)
chr8 (106-212)||(16917352-16917462)
chr8 (153-230)||(17491708-17491785)
chr8 (104-224)||(25473403-25473528)
chr8 (104-209)||(31715992-31716104)
chr8 (112-224)||(45041324-45041440)
chr8 (104-230)||(5908797-5908928)
chr8 (163-230)||(33827821-33827888)
chr8 (163-230)||(35643670-35643737)
chr8 (104-213)||(23492202-23492316)
chr8 (102-211)||(44529395-44529509)
chr8 (151-224)||(36069759-36069832)
chr8 (104-224)||(36545306-36545431)
chr8 (151-224)||(38391945-38392018)
chr8 (104-224)||(42469727-42469852)
chr8 (163-239)||(12025920-12025995)
chr8 (151-230)||(16705898-16705978)
chr8 (159-230)||(28169543-28169614)
chr8 (159-229)||(9904942-9905012)
chr8 (165-227)||(35825522-35825584)
chr8 (166-219)||(12966381-12966434)
chr8 (154-227)||(27037789-27037862)
chr8 (159-240)||(33076267-33076346)
chr8 (151-224)||(35362702-35362775)
chr8 (159-224)||(41971850-41971915)
chr8 (104-171)||(1928587-1928659)
chr8 (162-230)||(10079970-10080038)
chr8 (104-152)||(14742082-14742130)
chr8 (159-199)||(42584541-42584581)
[»] chr4 (54 HSPs)
chr4 (105-230)||(26037506-26037636)
chr4 (104-220)||(55007907-55008028)
chr4 (104-224)||(31959814-31959939)
chr4 (104-208)||(34208269-34208378)
chr4 (103-219)||(48622542-48622663)
chr4 (104-223)||(25574982-25575106)
chr4 (105-224)||(26024851-26024975)
chr4 (151-223)||(27049229-27049301)
chr4 (106-221)||(55388213-55388333)
chr4 (107-237)||(31459139-31459273)
chr4 (104-230)||(35690422-35690553)
chr4 (104-230)||(37488242-37488373)
chr4 (104-198)||(39100536-39100635)
chr4 (112-230)||(39708584-39708707)
chr4 (163-229)||(31043224-31043290)
chr4 (160-230)||(45204900-45204970)
chr4 (104-224)||(1777017-1777142)
chr4 (159-224)||(30621261-30621326)
chr4 (104-224)||(52569515-52569640)
chr4 (151-224)||(56439623-56439696)
chr4 (154-229)||(42639075-42639150)
chr4 (104-198)||(47265195-47265294)
chr4 (151-230)||(49987559-49987638)
chr4 (159-230)||(51421881-51421952)
chr4 (151-213)||(53518375-53518437)
chr4 (104-224)||(8286596-8286721)
chr4 (104-224)||(21528445-21528570)
chr4 (155-224)||(55768555-55768624)
chr4 (155-224)||(55832811-55832880)
chr4 (159-211)||(26510558-26510610)
chr4 (107-230)||(37042667-37042795)
chr4 (151-206)||(5306471-5306526)
chr4 (159-230)||(21107143-21107214)
chr4 (159-206)||(31339699-31339746)
chr4 (160-230)||(40420275-40420343)
chr4 (159-230)||(47372802-47372873)
chr4 (159-230)||(53540441-53540512)
chr4 (154-224)||(21237015-21237085)
chr4 (159-213)||(41192229-41192283)
chr4 (159-224)||(47147530-47147593)
chr4 (165-230)||(28550521-28550586)
chr4 (151-224)||(34233076-34233149)
chr4 (153-198)||(41729504-41729549)
chr4 (104-137)||(48451073-48451106)
chr4 (104-153)||(56130403-56130452)
chr4 (104-152)||(436463-436511)
chr4 (104-152)||(30634106-30634154)
chr4 (159-230)||(33225895-33225964)
chr4 (104-152)||(43434158-43434206)
chr4 (159-223)||(44384988-44385052)
chr4 (104-152)||(45209205-45209253)
chr4 (104-152)||(46153942-46153990)
chr4 (104-152)||(50238615-50238663)
chr4 (104-152)||(50238701-50238749)
[»] chr5 (32 HSPs)
chr5 (151-213)||(418086-418148)
chr5 (104-224)||(13561386-13561511)
chr5 (159-231)||(9235197-9235269)
chr5 (104-230)||(11675680-11675812)
chr5 (159-230)||(14667922-14667993)
chr5 (103-224)||(3302001-3302127)
chr5 (159-229)||(12576920-12576990)
chr5 (104-224)||(2915496-2915620)
chr5 (104-224)||(29816539-29816664)
chr5 (112-224)||(38685124-38685241)
chr5 (159-223)||(17340496-17340560)
chr5 (151-230)||(6889144-6889223)
chr5 (163-230)||(14725669-14725736)
chr5 (104-190)||(18855798-18855889)
chr5 (108-224)||(1287583-1287704)
chr5 (104-224)||(4496541-4496666)
chr5 (101-213)||(43557830-43557947)
chr5 (104-230)||(5303595-5303729)
chr5 (104-199)||(32442126-32442225)
chr5 (104-152)||(36551380-36551428)
chr5 (112-198)||(5558324-5558415)
chr5 (163-230)||(23980095-23980162)
chr5 (187-230)||(28186863-28186906)
chr5 (104-174)||(38132543-38132618)
chr5 (170-213)||(41894234-41894277)
chr5 (104-138)||(9460828-9460862)
chr5 (159-224)||(35615440-35615505)
chr5 (176-237)||(36200874-36200934)
chr5 (104-152)||(408494-408542)
chr5 (104-152)||(2645224-2645272)
chr5 (102-138)||(32489294-32489330)
chr5 (104-197)||(38830504-38830601)
[»] chr6 (27 HSPs)
chr6 (104-230)||(34505-34636)
chr6 (159-230)||(9593768-9593839)
chr6 (104-198)||(12890758-12890857)
chr6 (104-224)||(34143765-34143890)
chr6 (104-224)||(34156381-34156506)
chr6 (103-210)||(9706941-9707053)
chr6 (103-230)||(31818682-31818814)
chr6 (104-214)||(3206459-3206574)
chr6 (103-213)||(5096002-5096117)
chr6 (159-229)||(24665963-24666033)
chr6 (151-224)||(14389213-14389286)
chr6 (104-224)||(28085533-28085658)
chr6 (102-198)||(34934828-34934929)
chr6 (166-230)||(43119-43183)
chr6 (160-224)||(1748006-1748070)
chr6 (159-223)||(5897615-5897679)
chr6 (151-230)||(8364707-8364786)
chr6 (160-230)||(6055832-6055902)
chr6 (107-224)||(30031413-30031535)
chr6 (154-224)||(32756078-32756148)
chr6 (151-208)||(9568872-9568929)
chr6 (163-224)||(10098958-10099019)
chr6 (104-152)||(12133902-12133950)
chr6 (165-224)||(18238210-18238270)
chr6 (106-138)||(20864835-20864867)
chr6 (161-224)||(31831920-31831984)
chr6 (104-152)||(33730199-33730247)
[»] scaffold0570 (1 HSPs)
scaffold0570 (104-224)||(948-1073)
[»] scaffold0041 (1 HSPs)
scaffold0041 (103-224)||(16735-16861)
[»] scaffold0279 (1 HSPs)
scaffold0279 (187-230)||(17690-17733)
[»] scaffold0180 (1 HSPs)
scaffold0180 (159-224)||(25503-25569)
[»] scaffold0025 (1 HSPs)
scaffold0025 (151-213)||(39487-39549)
[»] scaffold0010 (1 HSPs)
scaffold0010 (151-229)||(160376-160454)
[»] scaffold0168 (1 HSPs)
scaffold0168 (104-152)||(28889-28937)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-152)||(31702-31750)


Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 2377433 - 2377194
Alignment:
Q  1 tatgtatatctaatgttaagtttaaaaattgacactgcattatttgaacacaaatctcatctttccaaccaggtagctcagttggtaagttgagggggac 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377433 tatgtatatctaatgttaagtttaaaaattgacactgcattatttgaacacaaatctcatctttccaaccaggtagctcagttggtaagttgagggggac 2377334  T
Q  101 actacaacaataaccaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2377333 actacaacaataaccaagccttatctcactaagtggggccgacgacatggattacgctataatgttctatcatataccatagttggatccaactcattat 2377234  T
Q  201 tctctaaatcttttttaatagtttatcttaggtcttcatc 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2377233 tctctaaatcttttttaatagtttatcttaggtcttcatc 2377194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 9496148 - 9496017
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||||| || ||||||||||||  | | ||||||||     ||||| |||||||||||||||| |||||| ||||||||||||||||    
T  9496148 acaacaacaaccaagccttgtcccactaagtggggttggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatt 9496049  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    |  |||||||||||| | |||||||| |||||    
T  9496048 aacctctaaatctttctgaatagtttctctta 9496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 12734982 - 12734857
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| |||| ||||||||     ||| | ||| |||||||||||| |||||| ||||||||||||||||    
T  12734982 acaacaacaaccaagccttatcccactaagtggggtcgactacatggatcaaattacaccatagtgttctatcataaaccatatttggatccaactcatt 12734883  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  12734882 gacctctaaatcctttctaatggttt 12734857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 19336945 - 19337018
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| ||||||||||||| || |||||||    
T  19336945 attacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagttt 19337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 45543074 - 45543203
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||| || ||||| ||||| |||||||||||| || | |||| |||     ||||| |||||||||||||||| |||||| ||||||| |||||||||    
T  45543074 caacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagtacgccataatgttctatcataaaccatatttggatcgaactcatta 45543173  T
Q  200 ttctctaaatcttttttaatagtttatctta 230  Q
      ||||||||||||| ||||||||| |||||    
T  45543174 -cctctaaatcttttctaatagtttctctta 45543203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 12141766 - 12141701
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||  |||||||||    
T  12141766 ataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagttt 12141701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 213
Target Start/End: Complemental strand, 18959192 - 18959079
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    ||||||||||||||||||||| |||||||||||| |  | ||||||||     || || |||||||||||||||| |||||| || ||||||||||||||    
T  18959192 caacaataaccaagccttatcccactaagtggggtcagctacatggatcaaattatgccataatgttctatcatagaccatattttgatccaactcatta 18959093  T
Q  200 ttctctaaatcttt 213  Q
     |||| || |||||    
T  18959092 atctccaagtcttt 18959079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 33504498 - 33504374
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt-attctct 205  Q
    |||||||||||||| |||||||||||| || | | ||||||     ||||| ||||||||||||||||||||||| ||  |||||||| ||| | |||||    
T  33504498 aaccaagccttatcccactaagtggggtcggctagatggatcaaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctct 33504399  T
Q  206 aaatcttttttaatagtttatctta 230  Q
    | |||||| |||||||||| |||||    
T  33504398 agatctttcttaatagtttctctta 33504374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 224
Target Start/End: Complemental strand, 38430157 - 38430041
Alignment:
Q  113 accaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctctaa 207  Q
    |||||||||||||||||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||    
T  38430157 accaagccttatctcactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaa 38430058  T
Q  208 atcttttttaatagttt 224  Q
    ||||||| |||| ||||    
T  38430057 atcttttctaatggttt 38430041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 9556430 - 9556500
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||||| ||||||  | |||||||||||||| || ||| |||||| ||||||||||||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatctta 9556500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 2610870 - 2610745
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||||||||||||||||||||| ||   ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  2610870 acaacaacaaccaagccttatctcactaagtggggtcggttacatggatcaaataacgccatagtgttctatcatacaccaaatttggatccaactcatt 2610771  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  2610770 gacctctaaatcctttctaatggttt 2610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 25834960 - 25834835
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| | | |||||||||||| |||||| ||||||||||||||||    
T  25834960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccacagtgttctatcataaaccatatttggatccaactcatt 25834861  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  25834860 gacctctaaatcctttctaatggttt 25834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 28508960 - 28508835
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  28508960 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactcatt 28508861  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  28508860 gacctctaaatcctttctaatggttt 28508835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 31959804 - 31959672
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| ||||||||||||||  ||||||||||| |  | ||||||||     || || ||| |||||||||||| |||||| |||||||||||||||    
T  31959804 tacaacaacaaccaagccttatcctactaagtggggtctgctacatggatcaaattatgccatagtgttctatcataaaccatatttggatccaactcat 31959705  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    |   ||||||||| ||| |||| |||| |||||    
T  31959704 tgacctctaaatcctttctaatggtttctctta 31959672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 43573130 - 43573230
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||| |||| |||||| | |||| ||||||||||||||||    
T  43573130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataacgttcgatcataaatcatatttggatccaactcatt 43573229  T
Q  199 a 199  Q
    |    
T  43573230 a 43573230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 227471 - 227372
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  227471 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 227372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 3635323 - 3635422
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||||||||    
T  3635323 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 3635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 228
Target Start/End: Complemental strand, 8181060 - 8180933
Alignment:
Q  106 aacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattat 200  Q
    ||||| ||| |||||||||| |||||||||||| || | |||||||| |     | ||||| |||||||||||| |||| | ||||||||||||||||      
T  8181060 aacaacaacgaagccttatcccactaagtggggtcggctacatggatcaaatgacactatagtgttctatcatacaccaaatttggatccaactcattga 8180961  T
Q  201 tctctaaatcttttttaatagtttatct 228  Q
     ||||||||| ||| |||| ||||||||    
T  8180960 cctctaaatcctttctaatggtttatct 8180933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 12882045 - 12882176
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| ||||||||| ||  | | ||||||||     ||||| | |||||||||||| | |||||| ||||||||||||||||    
T  12882045 acaacaacaaccaagccttatcccactaagtgaggtaggctacatggatcaaattacgccaaaatgttctatcacaaaccatatttggatccaactcatt 12882144  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    |  |||||||| |||  || |||||| |||||    
T  12882145 aacctctaaatatttcctagtagtttctctta 12882176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 33287643 - 33287572
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| || |||| ||||||||| | |||| |||||| |||||||||| |||||    
T  33287643 ataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctctta 33287572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 37470193 - 37470264
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||||||| ||||| || |||||||||||||| |||||| |||| |  ||||||||| |||||    
T  37470193 ataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctctta 37470264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 42149712 - 42149791
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| |||||||||||||||| |||||| ||  ||||| |||| || |||||| |||||| |||||||||| |||||    
T  42149712 attacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctctta 42149791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 8197541 - 8197671
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  ||||||||||||    
T  8197541 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8197640  T
Q  199 attctctaaatcttttttaatagtttatctt 229  Q
    | ||| || |||||| |||||||||| ||||    
T  8197641 aatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 229
Target Start/End: Original strand, 8202301 - 8202431
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||| ||||| |||||||| ||| || | |||||||| |     ||| ||||| |||||||||||| |||| ||  ||||||||||||    
T  8202301 acaacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacgacgccataatattctatcatatatcatatttctatccaactcatt 8202400  T
Q  199 attctctaaatcttttttaatagtttatctt 229  Q
    | ||| || |||||| |||||||||| ||||    
T  8202401 aatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 39029808 - 39029738
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||| |||||||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  39029808 acgccataatgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 39029738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 187
Target Start/End: Original strand, 9531595 - 9531688
Alignment:
Q  99 acactacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttgga 187  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||| |||||| |||||| |||||    
T  9531595 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttccatcataaaccatatttgga 9531688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 26784402 - 26784471
Alignment:
Q  161 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||| |||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||| |||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctctta 26784471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 196
Target Start/End: Complemental strand, 30306314 - 30306217
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||    
T  30306314 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatccaactca 30306217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 45078008 - 45077884
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc--atta 199  Q
    |||| |||||||| |||||||||||||||||| ||   ||||||||     || || || ||||||||||||| || ||| || ||||||||||  ||||    
T  45078008 acaacaaccaagctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctatcataaactatatttcgatccaactctcatta 45077909  T
Q  200 ttctctaaatcttttttaatagttt 224  Q
     ||||||||||||| ||||||||||    
T  45077908 atctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 213
Target Start/End: Complemental strand, 45437063 - 45437010
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||||||||||| |||||||| ||||||||||  ||||| |||||||||||||    
T  45437063 taatgttctatcaaataccatatttggatccaatgcattaatctctaaatcttt 45437010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 32402722 - 32402666
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttt 215  Q
    |||||||||||||||||||| || ||  ||||||||||||| |||||| ||||||||    
T  32402722 ataatgttctatcatataccttatttctatccaactcattaatctctagatcttttt 32402666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 138
Target Start/End: Complemental strand, 17429333 - 17429298
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtgggg 138  Q
    |||||||| |||||||||||||||||||||||||||    
T  17429333 tacaacaacaaccaagccttatctcactaagtgggg 17429298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 21834772 - 21834705
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||| | || |||||||||||||| ||| ||||| |||  |||||||||||||||    
T  21834772 tgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatctta 21834705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 23915745 - 23915824
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||| |||||||||||| |||||||||   |||| ||||||| |||||| || ||| |||||||||| |||||    
T  23915745 attacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctctta 23915824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 237
Target Start/End: Complemental strand, 23997829 - 23997747
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    |||| ||| |||| ||||| | |||||| ||||||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  23997829 acgccatagtgttttatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 23997747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Complemental strand, 26670984 - 26670925
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||| | |||| || | |||||||||||| ||||||||||||| ||||||||||    
T  26670984 ttctatcataaatcatattttggtccaactcattaatctctaaatctttcttaatagttt 26670925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 6219187 - 6219133
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    |||||||||||||||| |||||| || | ||||||||| || |||||||||||||    
T  6219187 ataatgttctatcataaaccatatttcggtccaactcactaatctctaaatcttt 6219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 37452286 - 37452348
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 221  Q
    |||||||||||||||| |||||| ||   |||||||||||| ||||||| ||||| |||||||    
T  37452286 ataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatag 37452348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 38452685 - 38452811
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||| ||||||| |||| | |||||||||||||||    
T  38452685 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcgaatgacaccatagtgttttatcatacaccaaatttggatccaactcat 38452784  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||| ||| |||| ||||    
T  38452785 tgacctctaaatcctttctaatggttt 38452811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 4807882 - 4807829
Alignment:
Q  99 acactacaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  4807882 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 4807829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 11412921 - 11412865
Alignment:
Q  167 ctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||| |||||| ||||||||||||||||| ||||| |||||||  |||||||||    
T  11412921 ctatcataaaccatatttggatccaactcattaatctct-aatctttcctaatagttt 11412865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 12474926 - 12474975
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  12474926 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12474975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 230
Target Start/End: Original strand, 19235046 - 19235115
Alignment:
Q  161 aatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||||| ||  |||||| |||||| |||||| |||||| | |||||||| |||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctctta 19235115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 42543517 - 42543480
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccg 141  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  42543517 acaacaacaaccaagccttatcccactaagtggggccg 42543480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 12520062 - 12520110
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  12520062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 12520110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 17670750 - 17670702
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  17670750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 17670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 136
Target Start/End: Original strand, 25721364 - 25721396
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtgg 136  Q
    |||||||||||||||||||||| ||||||||||    
T  25721364 acaacaataaccaagccttatcccactaagtgg 25721396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 38328370 - 38328418
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  38328370 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 38328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 196
Target Start/End: Original strand, 39709202 - 39709298
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 196  Q
    |||||| ||||||||| |||| |||||||||||| || | ||||||     ||||||| ||| ||||| |||||| |||||| || |||||||||||    
T  39709202 caacaacaaccaagccatatcccactaagtggggtcggctacatggatcaaattacgccatagtgttcaatcataaaccatattttgatccaactca 39709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 41763043 - 41763091
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  41763043 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 41763091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 45289090 - 45289222
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| ||||||||||||  | ||||||||||     || ||||||||||||||||||| |||||| |||||||||||||||    
T  45289090 tacaacaacaaccaagccttatcccactaagtggggttggcgacatggatcaaattatgctataatgttctatcataaaccatatttggatccaactcat 45289189  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    || |||||||||||||  ||||||||| |||||    
T  45289190 taatctctaaatctttcctaatagtttctctta 45289222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 49042219 - 49042087
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatata-ccatagttggatccaactcat 197  Q
    ||||||| |||||||||||||||||| |||||||| || | ||||||||     ||||| ||| |||||||||||| | ||||| |||||||||||||||    
T  49042219 acaacaacaaccaagccttatctcaccaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaaccatatttggatccaactcat 49042120  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    ||  ||||||||||||  ||||||||| |||||    
T  49042119 taacctctaaatctttcctaatagtttctctta 49042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 53519862 - 53519725
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||||||||||||||||||||| || | |||||||| |     ||  ||| |||||||||| | ||| || ||||||||||||||||    
T  53519862 acaacaacaaccaagccttatctcactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcaaaaaccttatttggatccaactcatt 53519763  T
Q  199 attctctaaatcttttttaatagtttatcttaggtcttc 237  Q
       |||||||||||||||||| |||| ||||||||||||    
T  53519762 gacctctaaatcttttttaatggttt-tcttaggtcttc 53519725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 48508517 - 48508386
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||| ||||||||||||    
T  48508517 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttgaatccaactcatt 48508418  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
       ||||||||| ||| |||| |||| |||||    
T  48508417 gacctctaaatcctttctaatggtttctctta 48508386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 49841838 - 49841767
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||||||||||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  49841838 ataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctctta 49841767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 54128661 - 54128530
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     || || |||||||||||||||| |||||| |||| |||||||||||    
T  54128661 acaacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattatgccataatgttctatcataaaccatatttgggtccaactcatt 54128562  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
       ||||||||||||  | ||||||| |||||    
T  54128561 gacctctaaatctttccttatagtttctctta 54128530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 15296192 - 15296059
Alignment:
Q  101 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 195  Q
    |||||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||  | | |||| |||||||||| ||    
T  15296192 actacaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacaccataatgttctatccgaaatcatatttggatccaattc 15296093  T
Q  196 attattctctaaatcttttttaatagtttatctt 229  Q
    ||||  ||||||||||||  ||||||||| ||||    
T  15296092 attaacctctaaatctttcctaatagtttctctt 15296059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 36304196 - 36304123
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||| ||||||| |||||||| |||||| || |||||||||||||| |||||| |||||| ||||||||||    
T  36304196 attacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 39600741 - 39600812
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||| || |||| | |||||||||||||||||  |||||||||||| |||||||||| |||||    
T  39600741 ataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctctta 39600812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 221
Target Start/End: Complemental strand, 29601114 - 29601052
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatag 221  Q
    |||||||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||||||    
T  29601114 ataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 12096705 - 12096830
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  12096705 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 12096804  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  12096805 gacctctaaatcctttctaatggttt 12096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 40106619 - 40106720
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| | || |||| |||     || |  |||||||||||||||| |||||| |||||||||||||||    
T  40106619 tacaacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattatgtcataatgttctatcataaaccatatttggatccaactcat 40106718  T
Q  198 ta 199  Q
    ||    
T  40106719 ta 40106720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 40116390 - 40116450
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 211  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||| |||||||||||    
T  40116390 attacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 219
Target Start/End: Original strand, 52156084 - 52156204
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  52156084 acaacaacaaccgagccttatcccactaagtggggtcggctacatggatcagatgacgccatagtgttctatcataaaccatatttggatccaactcatt 52156183  T
Q  199 attctctaaatcttttttaat 219  Q
       ||||||||| ||| ||||    
T  52156184 gacctctaaatcctttctaat 52156204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 5169114 - 5169015
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||| | |||||| ||||||||||||||||    
T  5169114 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 5169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 19162652 - 19162718
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||| ||||||| ||| ||||||||||||| |||||||||||||  ||||||||| |||||    
T  19162652 tgttctatcat-taccatacttgcatccaactcattaatctctaaatctttcctaatagtttctctta 19162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 19676089 - 19676212
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    |||||||||||||| |||||||||||| |  | |||||||| |     ||| |||||| ||||||||| | |||| |||||||||||||||||  |||||    
T  19676089 aaccaagccttatcccactaagtggggtcagctacatggatcaaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctcta 19676188  T
Q  207 aatcttttttaatagtttatctta 230  Q
    ||| |||  ||||||||| |||||    
T  19676189 aatttttcctaatagtttctctta 19676212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 40116520 - 40116599
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| | |||||||||||||| |||||| || | |||||||||||| ||||||||||| |  ||||||||| |||||    
T  40116520 attacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctctta 40116599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 50960697 - 50960768
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||| ||||| ||| |||||| ||||||||||||||||| |||||||| ||||  ||||||||| |||||    
T  50960697 ataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttctctta 50960768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 19758109 - 19758032
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    |||||||||||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19758109 ataatgttctatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19758032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 192
Target Start/End: Original strand, 45374477 - 45374570
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaa 192  Q
    ||||||| |||||||||||||| |||||||||||| |  | ||||||     ||||||| |||||||||||||  | |||||||||||||||||    
T  45374477 acaacaacaaccaagccttatcccactaagtggggtcagctacatggattaaattacgccataatgttctatccgaaaccatagttggatccaa 45374570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 52139082 - 52138957
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  52139082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaataacgtcatagtgttctatcatacaccaaatttggatccaactcatt 52138983  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  52138982 gacctctaaatcctttctaatggttt 52138957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 38431069 - 38431021
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaa 208  Q
    ||||||||||||||| |||||| |||||||||||||||||  |||||||    
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaa 38431021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 39235360 - 39235292
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 227  Q
    ||||||||||||| || |||||| || ||||||||||||||   |||||||||||  ||||||||||||    
T  39235360 ataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatc 39235292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 44571643 - 44571599
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaat 209  Q
    |||||||||| |||||| ||||||||||||||||| |||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctctaaat 44571599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 45486849 - 45486983
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatatacca---tagttggatccaactc 195  Q
    ||||||| |||||||| ||||| ||||||||||||||| | ||||||||     || || |||||||||||||||| ||||   || |||| ||||| ||    
T  45486849 acaacaacaaccaagctttatcccactaagtggggccggctacatggatcaaattatgccataatgttctatcataaaccatattatttggttccaagtc 45486948  T
Q  196 attattctctaaatcttttttaatagtttatctta 230  Q
    |||| |||| || |||||  ||||||||| |||||    
T  45486949 attaatctcaaagtctttcataatagtttctctta 45486983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 50237695 - 50237759
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||| ||| ||  |||||||||| || ||||| ||||||| ||||||||||    
T  50237695 taatgttctatcatatacaatatttctatccaactcaataatctctgaatctttcttaatagttt 50237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 2133612 - 2133711
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| |||  ||||||     || |||| ||| |||||||||||| || ||| |||||| |||||||||    
T  2133612 acaacaacaaccaagccttatcccactaagtggggtcgagtacatggatcaaatcacgccatagtgttctatcataaactatatttggattcaactcatt 2133711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 212
Target Start/End: Complemental strand, 11284272 - 11284157
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtggggccgacgacatggattac-----gctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||||| || ||||||||||||||||||| ||||  | | |||||||| |      || ||||||||| ||||||||||||| ||  ||||||||||    
T  11284272 ctacaacaacaagcaagccttatctcactaagcggggttggctacatggatcaaacgatgcaataatgttcaatcatataccatatttatatccaactca 11284173  T
Q  197 ttattctctaaatctt 212  Q
    ||| |||||| |||||    
T  11284172 ttaatctctacatctt 11284157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 30294185 - 30294252
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||| ||||||| | |||| || |||||||||||||   || ||||||||||||||||||||||||||    
T  30294185 tgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatctta 30294252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 38060996 - 38060897
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||  |||||| |||||||||||| || | ||||||||     ||||| ||  |||||||||||| |||||| ||||||||||||||||    
T  38060996 acaacaacaaccaattcttatcccactaagtggggtcggctacatggatcaaattacgccatggtgttctatcataaaccatatttggatccaactcatt 38060897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 46431767 - 46431810
Alignment:
Q  187 atccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctctta 46431810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 55244500 - 55244453
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  55244500 ataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 237
Target Start/End: Complemental strand, 19737206 - 19737129
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    |||||||| ||||||| |||||| |  |||||||||||||| ||||||||| |||  ||||||||| || |||||||||    
T  19737206 ataatgttttatcataaaccatattgagatccaactcattaatctctaaatatttcctaatagtttttc-taggtcttc 19737129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 26490513 - 26490467
Alignment:
Q  183 ttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    ||||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  26490513 ttggatcaaactcattagtctctaaatcttttctaatagtttctctt 26490467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 35033373 - 35033303
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||| ||| |||||||||| | |||||| ||||||||||||||||   ||||||||||||| |||| ||||    
T  35033373 acgccatagtgttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttctaatggttt 35033303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 37779099 - 37779045
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    |||||||||||||||| |||||| | ||||| | ||||||| |||||||||||||    
T  37779099 ataatgttctatcataaaccatattcggatctagctcattaatctctaaatcttt 37779045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 23610932 - 23610969
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccg 141  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  23610932 acaacaacaaccaagccttatcccactaagtggggccg 23610969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 29475916 - 29475843
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||| ||| | |||||||||| || ||| ||  ||||||||||||| |||||| |||||| ||||||||||    
T  29475916 attacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagttt 29475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 152
Target Start/End: Original strand, 31566160 - 31566209
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31566160 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31566209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 39208830 - 39208789
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattat 200  Q
    |||||||||||||||| |||||| |||||||| |||||||||    
T  39208830 ataatgttctatcataaaccatatttggatcctactcattat 39208789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 27192507 - 27192471
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtgggg 138  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  27192507 ctacaacaacaaccaagccttatcccactaagtgggg 27192471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 39512825 - 39512777
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  39512825 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 39512777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 42026591 - 42026667
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||| ||||||||||||||||||||||| ||  ||| ||||||||| || ||| |||  | |||||||||| |||||    
T  42026591 acgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctctta 42026667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 50249659 - 50249611
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| ||||||||| |||| |||||||||||| |||| ||||||||    
T  50249659 acaacaacaaccaagccgtatcccactaagtggggtcgactacatggat 50249611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 231
Target Start/End: Original strand, 52678902 - 52678982
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 231  Q
    ||||||||||||| || ||||||  | |||| ||| || ||||||||||  ||||||||||||  ||||||||| ||||||    
T  52678902 attacgctataatattatatcatgaatcatatttgaattcaactcattaacctctaaatctttcataatagtttctcttag 52678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 6e-24; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 40979927 - 40980059
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| |||||||||||||||    
T  40979927 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatccaactcat 40980026  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    |   ||||||||||||| ||||||||| |||||    
T  40980027 tgacctctaaatcttttctaatagtttctctta 40980059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 36101777 - 36101891
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| | || ||||||||     ||||  |||||||||||||||| |||||| || |||||||||||||    
T  36101777 acaacaacaaccaagccttatcccactaagtggggtcaactacatggatcaaattacgtcataatgttctatcataaaccatattttgatccaactcatt 36101876  T
Q  199 attctctaaatcttt 213  Q
    | ||| |||||||||    
T  36101877 aatctataaatcttt 36101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 28627936 - 28628064
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| ||| |||||||||| |||||||||| | || | ||||||||     ||||| |||||||||||||||| |||| | ||| ||||||||||||| |    
T  28627936 acaacaactaagccttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatcataaaccacatttgcatccaactcattaat 28628035  T
Q  202 ctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||  ||||||||| |||||    
T  28628036 ctctaaatctttcctaatagtttctctta 28628064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 28542007 - 28542081
Alignment:
Q  162 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    ||||||||||||| |||||||||  ||||||||||||| ||||||||||||| |||||||||| || |||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagtttttc-taggtcttc 28542081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 38135265 - 38135344
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||||| ||||||||||  ||||| || | |||||||||||| |||||||||||||||||||||||| |||||    
T  38135265 attacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctctta 38135344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 27649062 - 27648936
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| | | |||||||||||| |||| | ||||||||||||||||    
T  27649062 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccacagtgttctatcataaaccaaatttggatccaactcatt 27648963  T
Q  199 attctctaaatcttttttaatagttta 225  Q
       ||||||||||||| |||| |||||    
T  27648962 gacctctaaatcttttctaatggttta 27648936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 37976457 - 37976403
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||||||||||    
T  37976457 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatcttt 37976403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Complemental strand, 1569246 - 1569174
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    |||||||  ||||||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||||||    
T  1569246 attacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagtt 1569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 9210704 - 9210835
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||| |||||||||| |||||||||||| |  | ||||||||     ||||| |||||||| ||||||| |||||| ||||||||||||||||    
T  9210704 acaacaacaacgaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgttgtatcataaaccatatttggatccaactcatt 9210803  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    |  |||||||| |||  ||| ||||| |||||    
T  9210804 aacctctaaatttttcctaaaagtttctctta 9210835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 21517440 - 21517511
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||| ||||||| | |||| |||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  21517440 ataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctctta 21517511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 36239848 - 36239927
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| |||||||||||||||| | |||| ||||||||||||| ||| ||||||||| |||  ||||||||| |||||    
T  36239848 attacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctctta 36239927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 32631846 - 32631709
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | |||| ||| |     ||| |||  ||||||||| | |||||| ||||||||||||||||    
T  32631846 acaacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatgacgccatagcgttctatcaaaaaccatatttggatccaactcatt 32631747  T
Q  199 attctctaaatcttttttaatagtttatcttaggtcttc 237  Q
       ||||||||||||| |||| |||| ||||||||||||    
T  32631746 gacctctaaatcttttctaatggttt-tcttaggtcttc 32631709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 5577547 - 5577596
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaa 208  Q
    |||||||||||||||| |||||| ||||||||||||||||| ||||||||    
T  5577547 ataatgttctatcataaaccatacttggatccaactcattagtctctaaa 5577596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 11594242 - 11594117
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  11594242 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 11594143  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  11594142 gacctctaaatcctttctaatggttt 11594117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 27893563 - 27893688
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||| ||| || | ||||| ||     || || |||||||||||||||| | |||| || | |||| ||||||    
T  27893563 acaacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattatgccataatgttctatcataaaacatatttcggtccagctcatt 27893662  T
Q  199 attctctaaatcttttttaatagttt 224  Q
    | ||||||||||||| ||||||||||    
T  27893663 aatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 43281956 - 43281831
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  43281956 acaacaacaaccaagccttgtcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 43281857  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  43281856 gacctctaaatcttttctaatggttt 43281831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 45836482 - 45836607
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||| ||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  45836482 acaacaacaaccgagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 45836581  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  45836582 gacctctaaatcctttctaatggttt 45836607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 33732115 - 33731997
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta---cgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||||| |||||||||||||| ||||||||||| ||| | |||||||| |    || |||||||||||||||| |||||| || ||||  ||||||||    
T  33732115 tacaacaacaaccaagccttatcccactaagtgggaccggctacatggatcaaattgccataatgttctatcataaaccatatttcgatctcactcatta 33732016  T
Q  200 ttctctaaatcttttttaa 218  Q
     ||| || |||||| ||||    
T  33732015 atctttagatctttcttaa 33731997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 42187723 - 42187592
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataa-tgttctatcatataccatagttggatccaactcat 197  Q
    ||||||| ||| |||||||||| |||||||||||| || | ||||||||     ||||| |||| |||||||||||| |||| | |||||||||||| ||    
T  42187723 acaacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaattacgccataaatgttctatcataaacca-atttggatccaactaat 42187625  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    || ||||||||| |||  ||||||||| |||||    
T  42187624 taatctctaaatatttcctaatagtttctctta 42187592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 2885722 - 2885821
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||||| |||||| |||| |||||||||||    
T  2885722 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccatagtgttctatcataaaccatatttgggtccaactcatt 2885821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 28208328 - 28208423
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaact 194  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| ||||||||||||    
T  28208328 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaact 28208423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 36136994 - 36136915
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||| |||||||||||||||||| |||||| |||||||||| ||||||   |||||||||||   |||||||| |||||    
T  36136994 attaccctataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctctta 36136915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 237
Target Start/End: Complemental strand, 38607274 - 38607137
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||| | |||||||||| | || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  38607274 acaacaacaaccaagccttaacccactaagtggagtcggctacatggatcaaacgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 38607175  T
Q  199 attctctaaatcttttttaatagtttatcttaggtcttc 237  Q
       ||||||||| ||| |||| |||| ||||||||||||    
T  38607174 gacctctaaatcctttctaatggttt-tcttaggtcttc 38607137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 209
Target Start/End: Complemental strand, 42969976 - 42969870
Alignment:
Q  108 caataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattc 202  Q
    ||||||| |||||||||| |||||||||||| || | ||||||||     ||  | ||||||||| |||||| |||||| |||||||||||||||||  |    
T  42969976 caataacaaagccttatcccactaagtggggtcggctacatggatcaaattatacgataatgttcaatcataaaccatatttggatccaactcattaacc 42969877  T
Q  203 tctaaat 209  Q
    |||||||    
T  42969876 tctaaat 42969870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 12841275 - 12841400
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||| |||||||||    
T  12841275 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatttggatacaactcatt 12841374  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  12841375 gacctctaaatcctttctaatggttt 12841400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 22349902 - 22349777
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| || ||||||||||| |||||||||||| |||| ||||||     || |||| ||| | ||||||||||||||| | |||||||||||| |||    
T  22349902 acaacaacaatcaagccttatcccactaagtggggtcgactacatggatcaaatgacgccatagtattctatcatataccaaatttggatccaacttatt 22349803  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       || |||||| |||||||| ||||    
T  22349802 gacctttaaatcctttttaatggttt 22349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 24549754 - 24549819
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||| |||||||| ||  ||||||||||||| |||||| |||||| |||||||||| |||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctctta 24549819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 29650666 - 29650541
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || ||||  || |||||||||| | |||||| ||||||| ||||||||    
T  29650666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccttagtgttctatcaaaaaccatatttggatcaaactcatt 29650567  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  29650566 gacctctaaatcttttctaatggttt 29650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 35922475 - 35922410
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||| | |||| || ||| ||||||||||  |||||||||||| ||||||||||    
T  35922475 ataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagttt 35922410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 39906372 - 39906497
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||| |||||    
T  39906372 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaagtcatt 39906471  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  39906472 gacctctaaatcctttctaatggttt 39906497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 12966238 - 12966167
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||| | |||||||||||||| ||  |||||| |||||| ||||||||| ||| |||||||||| |||||    
T  12966238 ataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctctta 12966167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 14057700 - 14057629
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14057700 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14057629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 14367728 - 14367657
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| ||| ||| ||| |||||  ||||||||||||  ||||||||| |||||    
T  14367728 ataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctctta 14367657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 21078144 - 21078085
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    |||| |||||||||||||||| |||| | ||||||||||||||||   ||||||||||||    
T  21078144 acgccataatgttctatcatacaccaaatttggatccaactcattgacctctaaatcttt 21078085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 45601694 - 45601627
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| | |||| || |||||||||||||| |||||| |||||| ||||| |||| |||||    
T  45601694 tgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctctta 45601627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 225
Target Start/End: Complemental strand, 5418288 - 5418223
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttta 225  Q
    |||||||||||||||| |||||| || | ||||||||||||  |||| ||||||| |||||||||||    
T  5418288 ataatgttctatcataaaccatatttcggtccaactcatta-actcttaatctttcttaatagttta 5418223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 26741946 - 26742024
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    ||||||| |||||||||||||||| |||||| || | |||||||||||  | || |||| |||  ||||||||||||||    
T  26741946 attacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctt 26742024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 28562423 - 28562497
Alignment:
Q  157 ctataatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||| ||||||| | ||||| | ||||||||||| ||| |||||||||||||  ||||||||| |||||    
T  28562423 ctataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctctta 28562497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 46355858 - 46355904
Alignment:
Q  106 aacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||| ||||||||||||||||||||||||||| || | ||||||||    
T  46355858 aacaacaaccaagccttatctcactaagtggggtcggctacatggat 46355904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 47848895 - 47848841
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    |||||||||||||||| |||||| ||||||||| ||||||| || | ||||||||    
T  47848895 ataatgttctatcataaaccatatttggatccagctcattaatccccaaatcttt 47848841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 199
Target Start/End: Complemental strand, 47852359 - 47852269
Alignment:
Q  114 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||||||||| | |||||||||| || | ||||||||     ||||| |||||||||||| ||| |||| | |||||||||||||||||    
T  47852359 ccaagccttatccccctaagtggggtcggctacatggatcaaattacgccataatgttctatgatacaccacatttggatccaactcatta 47852269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 48919395 - 48919269
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| || | ||||||| |||||| ||||||| |||||||    
T  48919395 tacaacaacaaccaagccttatcccattaagtggggtcgactacatggatcaaatgacgccatagtggtttatcataaaccatatttggatcaaactcat 48919296  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||| ||| |||| ||||    
T  48919295 tgacctctaaatcatttctaatggttt 48919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 228
Target Start/End: Original strand, 2882788 - 2882865
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatct 228  Q
    ||||||| |||||||||||||||| |||||  || |||||||||||||| | || |||  |||  |||||||||||||    
T  2882788 attacgccataatgttctatcataaaccatgtttcgatccaactcattaatttccaaaggtttcctaatagtttatct 2882865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 20899453 - 20899416
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccg 141  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  20899453 acaacaacaaccaagccttatcccactaagtggggccg 20899416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 30914503 - 30914536
Alignment:
Q  105 caacaataaccaagccttatctcactaagtgggg 138  Q
    ||||||||||||||||||||| ||||||||||||    
T  30914503 caacaataaccaagccttatcccactaagtgggg 30914536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 31682602 - 31682727
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| |  ||||||||| |||||    
T  31682602 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccaaatatggatccaattcatt 31682701  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  31682702 gacctctaaatcctttctaatggttt 31682727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 32368407 - 32368468
Alignment:
Q  169 atcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||| || ||||||||||| || ||||||||||||  ||||||| || |||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctctta 32368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 37618227 - 37618102
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | |||||||||||| |||    
T  37618227 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaacttatt 37618128  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  37618127 gacctctaaatcctttctaatggttt 37618102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 39812217 - 39812172
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    |||| |||||||||||||| |||||||||||||| || ||||||||    
T  39812217 acaacaaccaagccttatcccactaagtggggccaactacatggat 39812172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 5418356 - 5418308
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||| ||||| |||| ||||||||    
T  5418356 acaacaacaaccaagccttatcccactaaatggggtcgactacatggat 5418308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 22174227 - 22174151
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||| |||||||||||||| |||||||| ||  ||| || |||||| |||||| |||||| || ||||||| |||||    
T  22174227 acgccataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctctta 22174151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 31005487 - 31005439
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31005487 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 31869102 - 31869150
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31869102 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31869150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 33103198 - 33103094
Alignment:
Q  114 ccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 208  Q
    ||||||||||||  ||||||||||| || | ||||||||     ||||||||  |||||||||||| |||||| |  ||| |||||||||| |||||||     
T  33103198 ccaagccttatcctactaagtggggtcggctacatggatcaaattacgctatggtgttctatcataaaccatattccgattcaactcattaatctctaag 33103099  T
Q  209 tcttt 213  Q
    |||||    
T  33103098 tcttt 33103094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 35559050 - 35559118
Alignment:
Q  156 gctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||| |||| || | | ||||||||||||||||   ||||||||||||| |||| ||||    
T  35559050 gctataatgttctaccataaactaaatttggatccaactcattgacctctaaatcttttctaatggttt 35559118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 40169884 - 40169805
Alignment:
Q  152 ttacgctataatgttctatcatataccata-gttggatccaactcattattctctaaatcttttttaatagtttatcttag 231  Q
    ||||||| ||||||||||||||| |||||| ||||| ||||||| | || ||||| | ||||| |||||||||| ||||||    
T  40169884 ttacgctgtaatgttctatcatagaccatatgttgg-tccaactaactaatctctgagtctttcttaatagtttctcttag 40169805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 43491590 - 43491542
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  43491590 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43491542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 44401187 - 44401256
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  44401187 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 44401256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 41560511 - 41560380
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||||||||||  ||||| ||||||||||||||||    
T  41560511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataacccatatttggatccaactcatt 41560412  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | ||||||||| | |  ||||||||| |||||    
T  41560411 aatctctaaatgtatcctaatagtttctctta 41560380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 29129065 - 29128934
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatgg------attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    |||||| ||||||||||||||||||||||||||| || | ||||||      ||||| | |||||||||||||||| |||||| ||||||||||||  ||    
T  29129065 caacaaaaaccaagccttatctcactaagtggggtcggctacatgggatcatattacaccataatgttctatcataaaccatatttggatccaacttgtt 29128966  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    |  ||||||||||||  ||||||||| |||||    
T  29128965 aacctctaaatctttcctaatagtttctctta 29128934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 8796491 - 8796360
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||||     ||| |||||||||||||||| |||||| ||  |||||| |||||    
T  8796491 acaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaattacgccataatgttctatcataaaccatatttcaatccaagtcatt 8796392  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | | |||| |||||| |||||||||| |||||    
T  8796391 aatatctagatctttcttaatagtttctctta 8796360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 11941580 - 11941711
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||| |||| ||||||||| ||||||| ||||||||     ||||| |||||||| ||||||| |||||| |  ||||||||||| |    
T  11941580 acaacaacaaccaagccgtatcccactaagtgaggccgactacatggatcaaaatacgccataatgttttatcataaaccatactccgatccaactcaat 11941679  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | |||||||||||||| |||||| || |||||    
T  11941680 aatctctaaatcttttctaatagcttctctta 11941711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 230
Target Start/End: Original strand, 38807666 - 38807802
Alignment:
Q  99 acactacaacaataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaac 193  Q
    |||| ||||||| |||||||||||||| |||||||||||| || | |||||||     |||||| ||| |||||||||||| |||||| |||||||||||    
T  38807666 acacaacaacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaattacgccatagtgttctatcataaaccatatttggatccaac 38807765  T
Q  194 tcattattctctaaatcttttttaatagtttatctta 230  Q
    || ||   ||||||||| ||| |||| |||| |||||    
T  38807766 tcgttgacctctaaatcctttctaatggtttctctta 38807802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 237
Target Start/End: Original strand, 36623897 - 36624021
Alignment:
Q  116 aagccttatctcactaagtggggccgacgacatggat---tac-gctataatgttctatcatataccatagttggatccaactcattattctctaaatct 211  Q
    |||||||||| |||||||| ||| |||| ||||||||   ||| || ||||||||| ||| || |||||| |||||||||||||||||  ||||||||||    
T  36623897 aagccttatcccactaagtagggtcgactacatggatcattacagccataatgttcgatcctaaaccatatttggatccaactcattagcctctaaatct 36623996  T
Q  212 tttttaatagtttatcttaggtcttc 237  Q
    ||| ||||||||| || |||||||||    
T  36623997 tttctaatagtttctc-taggtcttc 36624021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 210
Target Start/End: Original strand, 4707221 - 4707331
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||     ||||||| ||| |||||||||||| |||| | |||||||||||||||||    
T  4707221 acaacaacaaccaagccttatcccactaagtggggtcggctacatgatcaaattacgccatagtgttctatcataaaccaaatttggatccaactcatta 4707320  T
Q  200 ttctctaaatc 210  Q
      |||||||||    
T  4707321 acctctaaatc 4707331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 25979231 - 25979356
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||    
T  25979231 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcataaaccatatttggatccaactcatt 25979330  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  25979331 gacctctaaatcctttctaatggttt 25979356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 52532619 - 52532747
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| ||||||||||| || |||||||||||| || | ||||| ||     ||||| |||||||||||||||| |||||| || | |||||||||||| |    
T  52532619 acaacaaccaagccttttcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatcataaaccatattttgttccaactcattaat 52532718  T
Q  202 ctctaaatcttttttaatagtttatctta 230  Q
     |||||||||||  ||||||||| |||||    
T  52532719 ttctaaatctttcctaatagtttctctta 52532747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 27520267 - 27520338
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| | |||| ||||||||| ||||||| ||||||||| |||| ||||||||| |||||    
T  27520267 ataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctctta 27520338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 40416593 - 40416522
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| || |||||||||||||| ||| || |||||| |||||||||| |||||    
T  40416593 ataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtctta 40416522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 19908046 - 19908144
Alignment:
Q  115 caagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 208  Q
    ||||||||||| |||||||||||| || | ||||||||     ||||| ||||||||| |||||| |||||| ||| ||||||||||||| ||||||||    
T  19908046 caagccttatcccactaagtggggtcggctacatggataaaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctctaaa 19908144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Original strand, 49347392 - 49347518
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | |||||||||||||||    
T  49347392 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcat 49347491  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||| ||| |||| ||||    
T  49347492 tgacctctaaatcctttctaatggttt 49347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 52561590 - 52561720
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||||||||||| |  | |||||| |||||||||||||||||    
T  52561590 caacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatttcgccataatgttctacccgaaaccatatttggatccaactcatta 52561689  T
Q  200 ttctctaaatcttttttaatagtttatctta 230  Q
      ||||||||||||  ||| ||||| |||||    
T  52561690 acctctaaatctttcctaacagtttctctta 52561720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 52921363 - 52921237
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||||| |||||||||| ||||    
T  52921363 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgcaatagtgttctatcataaaccatatttggatccaattcat 52921264  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||| ||| |||| ||||    
T  52921263 tgacctctaaatcctttctaatggttt 52921237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 1211027 - 1210902
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  1211027 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 1210928  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  1210927 gacctctaaatcctttctaatggttt 1210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 30202130 - 30202255
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  30202130 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 30202229  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  30202230 gacctctaaatcctttctaatggttt 30202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 37311755 - 37311880
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||||||| || |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  37311755 acaacaacaaccaagccttttcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 37311854  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  37311855 gacctctaaatcttttctaatggttt 37311880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 10200369 - 10200429
Alignment:
Q  162 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 222  Q
    ||||||||||||| |||||| |||||||||||||||   |||||||||||||| |||||||    
T  10200369 atgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagt 10200429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 191
Target Start/End: Original strand, 28090694 - 28090786
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcca 191  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||    
T  28090694 acaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 42501387 - 42501259
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    ||||||||||| | ||||| |||||||| ||| || | ||||||||||     |||| |||||||||||||||| ||||| ||  ||||||||||||| |    
T  42501387 acaataaccaaactttatcccactaagtagggtcggctacatggattaaacgacgctgtaatgttctatcatattccatatttctatccaactcattaat 42501288  T
Q  202 ctctaaatcttttttaatagtttatctta 230  Q
    || || |||||| |||||| ||| |||||    
T  42501287 ctatagatctttcttaataatttctctta 42501259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 43375658 - 43375722
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    |||||||||||||||  |||||| || | |||||||||||| ||||||||||||| |||||||||    
T  43375658 ataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 3818916 - 3818987
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||| |||||| |||||| ||  || |||||||||| ||||||||||||| |||||||||| |||||    
T  3818916 ataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctctta 3818987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 7762497 - 7762568
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| ||| |||||| || ||||||||||||||   |||||||||||| ||||||||| |||||    
T  7762497 ataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctctta 7762568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 9509548 - 9509469
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||||||||| |||||| |||||| |||| || |||||||||  || |||||||||  |||||||||||||||    
T  9509548 attacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatctta 9509469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 226
Target Start/End: Original strand, 29577203 - 29577269
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttat 226  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| ||||||||||||    
T  29577203 ataatgttctatcata-accatattttgatccagctcattaatctctagatctttcttaatagtttat 29577269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 32404527 - 32404657
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||| |||||||| |||||||||||| || | ||||||||     ||||| || ||||| ||||||| |||||  ||||||  ||||||||    
T  32404527 acaacaacaacca-gccttatcccactaagtggggtcggctacatggatcaaattacgccattatgttatatcataaaccatgtttggatttaactcatt 32404625  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | |||||||||||||  ||||||||| |||||    
T  32404626 aatctctaaatctttcctaatagtttctctta 32404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 39318359 - 39318280
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||||||||   ||||||||| ||| |||| |||| |||||    
T  39318359 attacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctta 39318280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 8676954 - 8676996
Alignment:
Q  188 tccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||||||||||||||||||||| |||||    
T  8676954 tccaactcattaatctctaaatcttttttaatagtttctctta 8676996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 37462878 - 37462986
Alignment:
Q  106 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 200  Q
    ||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| |||||| || |||| |||||||||     
T  37462878 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatgataaaccata-tttgatcaaactcattaa 37462976  T
Q  201 tctctaaatc 210  Q
     |||||||||    
T  37462977 cctctaaatc 37462986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 52878351 - 52878420
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaata 220  Q
    ||||| |||||| ||||||||||| | | ||||||||| ||||||||||  ||||||||||||| |||||    
T  52878351 attacactataaagttctatcataaatcgtagttggattcaactcattaacctctaaatcttttataata 52878420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 224
Target Start/End: Original strand, 4001520 - 4001580
Alignment:
Q  164 gttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||||| | |||||| ||||||||||||||||   |||||||||||||||||| ||||    
T  4001520 gttctatcaaaaaccatatttggatccaactcattgacctctaaatcttttttaatggttt 4001580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 6025824 - 6025764
Alignment:
Q  162 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagt 222  Q
    ||||||||||| |||||||| ||  ||||||||||||| |||||| |||||||||| ||||    
T  6025824 atgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagt 6025764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 6084205 - 6084150
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||| ||| |||||||||||| |||||| || |||||||||||||| ||||||    
T  6084205 attacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 13827640 - 13827687
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||||||||||||||||||| ||  ||||||||||||| ||||||    
T  13827640 ataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 21769710 - 21769793
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccata 181  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||||| | ||||||    
T  21769710 tacaacaacaaccaagccttatcacactaagtggggtcggctacatggatcaaattacgccataatgttctatcacaaaccata 21769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 205
Target Start/End: Original strand, 25715325 - 25715432
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||||| |||||||||| |||||| || | | ||||||||    
T  25715325 tacaacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccataatattctatcataaaccatatttcggttcaactcat 25715424  T
Q  198 tattctct 205  Q
    || |||||    
T  25715425 taatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 8203223 - 8203265
Alignment:
Q  188 tccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||| ||||||||||||||||| |||||    
T  8203223 tccaactcattaatctctagatcttttttaatagtttctctta 8203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 8672145 - 8672075
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||| |||||||||||| |||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  8672145 acgctatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggttt 8672075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 9599446 - 9599524
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    ||||||| |||| ||||||||||| ||||||  |||||| |||||||||  |||||||| |||  ||||||||| ||||    
T  9599446 attacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctctt 9599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 10569130 - 10569196
Alignment:
Q  158 tataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||||| ||| ||  ||||| || |||| |||||| |||||| ||||||||||    
T  10569130 tataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagttt 10569196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 32082821 - 32082894
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    |||||||||| | |||||| ||| ||||||||||||   ||||||||||||| |||| |||| ||||||||||||    
T  32082821 tgttctatcaaaaaccatatttgaatccaactcattgacctctaaatcttttctaatggttt-tcttaggtcttc 32082894  T

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Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 39140794 - 39140672
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| |||||||| ||||| |||||||||||| || | ||||| ||     ||||| |||||||||||||  | |||||| |||||||||||| ||||      
T  39140794 acaacaaccaagcattatcccactaagtggggtcggctacatgaatcaaattacgccataatgttctatctgaaaccatatttggatccaactaattaac 39140695  T
Q  202 ctctaaatcttttttaatagttt 224  Q
    |||||||| |||  |||||||||    
T  39140694 ctctaaatttttcctaatagttt 39140672  T

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Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 990518 - 990583
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||| ||||||  | |||||||||||||| |||||| |||| | | ||||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagttt 990583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 19936690 - 19936617
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||  ||||||||||||||  |||||| ||||||| |||||||||   |||||||||||  |||||||||    
T  19936690 attacgccgtaatgttctatcattaaccatatttggatctaactcattaacatctaaatctttcctaatagttt 19936617  T

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Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 37099762 - 37099811
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt 153  Q
    ||||||||||||||||||| || ||| ||||||||||| | |||||||||    
T  37099762 acaacaataaccaagccttttcccaccaagtggggccggctacatggatt 37099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 37430420 - 37430453
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggg 137  Q
    ||||||| ||||||||||||||||||||||||||    
T  37430420 acaacaacaaccaagccttatctcactaagtggg 37430453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 40568408 - 40568509
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||||| |||||||||||||| ||||||||||||  | | ||||||     ||||||| ||| | |||||||||| |||||| || | |||||||||    
T  40568408 ctacaacaacaaccaagccttatcccactaagtggggttggctacatggatcaaattacgccatagttttctatcataaaccatattttggtccaactca 40568507  T
Q  197 tt 198  Q
    ||    
T  40568508 tt 40568509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 40920589 - 40920642
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatctt 212  Q
    ||||| ||||||||||||||||| ||  ||||||||||||| |||||| |||||    
T  40920589 ataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 188
Target Start/End: Original strand, 44941776 - 44941865
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggat 188  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||| | ||||||    
T  44941776 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccaaatttggat 44941865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 136
Target Start/End: Original strand, 50771554 - 50771587
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtgg 136  Q
    |||||||| |||||||||||||||||||||||||    
T  50771554 tacaacaacaaccaagccttatctcactaagtgg 50771587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 4590533 - 4590657
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||| |||||| ||||||| |||||||||||| || | ||||||||     ||| | ||| |||||||||| ||| ||||  |  ||||||||||| |    
T  4590533 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatcaaattacaccatattgttctatcacatatcatatatctatccaactcatca 4590632  T
Q  200 ttctctaaatcttttttaatagttt 224  Q
     ||| ||||||||| ||||||||||    
T  4590633 atctataaatctttcttaatagttt 4590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 29577534 - 29577486
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  29577534 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 29577486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 38869109 - 38869033
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||| |||||||||||||||||||||||  |  ||||||| ||||| || ||| |||||| |||||| ||| |||||    
T  38869109 acgccataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctctta 38869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 42539212 - 42539260
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||||||||||||||| || |||||||||||| || | ||||||||    
T  42539212 acaacaataaccaagccttttcccactaagtggggtcgtctacatggat 42539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 43481798 - 43481846
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  43481798 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 43481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 490617 - 490503
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| || ||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||||     
T  490617 acaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactcatc 490518  T
Q  199 attctctaaatcttt 213  Q
    | |||||||||||||    
T  490517 aatctctaaatcttt 490503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 210
Target Start/End: Complemental strand, 29520934 - 29520820
Alignment:
Q  101 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 195  Q
    |||||||||| |||||||| ||||| |||||| |||||  | | ||||||||     ||||| |||||||||||||||| |||||| |||||||||||||    
T  29520934 actacaacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaattacgccataatgttctatcataaaccatatttggatccaactc 29520835  T
Q  196 attattctctaaatc 210  Q
    |||| ||||||||||    
T  29520834 attaatctctaaatc 29520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 230
Target Start/End: Complemental strand, 45419520 - 45419386
Alignment:
Q  101 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 195  Q
    |||||||||| |||||||||||||| |||||||||||| || | ||||||||     ||| | |||||||||||||||| |||| | ||||||| |||||    
T  45419520 actacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctatcataaaccaaatttggatcaaactc 45419421  T
Q  196 attattctctaaatcttttttaatagtttatctta 230  Q
    |||||  | |||| ||||  ||||||||| |||||    
T  45419420 attatgatttaaacctttcctaatagtttctctta 45419386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 35914600 - 35914732
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| ||||||| ||||||||||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| || | ||||||||||    
T  35914600 tacaacaacaaccaagtcttatctcactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatattttggtccaactcat 35914699  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    || |||  || |||||  ||||||||| |||||    
T  35914700 taatcttcaagtctttcctaatagtttctctta 35914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 43904717 - 43904777
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatct 211  Q
    ||||||| |||||||||||||||| |||||| || |||||||||||||| |||||||||||    
T  43904717 attacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatct 43904777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 2216568 - 2216439
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    |||||||  |||||||||||||||||| ||||||| || | ||||||     ||||| |||||||||||||||||| | |||| | ||||||||||||||    
T  2216568 acaacaaccaccaagccttatctcactgagtggggtcggctacatggatcaaattacactataatgttctatcata-aacatattaggatccaactcatt 2216470  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
      |||||||||| || |||||||||| |||||    
T  2216469 gatctctaaatc-ttcttaatagtttctctta 2216439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 30559915 - 30559844
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| ||||||  |||||||||||||||| |||||||||||||  | ||||||| |||||    
T  30559915 ataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctctta 30559844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 11523723 - 11523848
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  11523723 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 11523822  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  11523823 gacctctaaatcctttctaatggttt 11523848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 16917462 - 16917352
Alignment:
Q  106 aacaataaccaagccttatctcactaagtggggccgacgacatggatta----cgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    ||||||||||||| |||||| |||||||||||| || | |||||||| |    |  |  ||||||||||||||||||||| ||  ||||||||||||| |    
T  16917462 aacaataaccaagtcttatcccactaagtggggacggctacatggatcaaaagcagtcaaatgttctatcatataccatatttctatccaactcattaat 16917363  T
Q  202 ctctaaatctt 212  Q
    |||||||||||    
T  16917362 ctctaaatctt 16917352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Original strand, 17491708 - 17491785
Alignment:
Q  153 tacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||| |||||||||||||||| |||||| || | |||||||||||| |||| || ||||| |||||||||| |||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctctta 17491785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 25473403 - 25473528
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||||||| |||||||||||| |||| | ||||||| ||||||||    
T  25473403 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgctatagtgttctatcatacaccaaatttggatcaaactcatt 25473502  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  25473503 gacctctaaatcctttctaatggttt 25473528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 31716104 - 31715992
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacg--acatggat-----tacgctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||| |||||||||||||| |||||||||| |  ||||  ||||||||     ||||| ||||||||||||| || |||||| |||||||||||| |    
T  31716104 acaacaacaaccaagccttatcccactaagtggtggtgacgctacatggatcaaattacgccataatgttctatcttaaaccatatttggatccaactaa 31716005  T
Q  197 ttattctctaaat 209  Q
    ||| |||||||||    
T  31716004 ttaatctctaaat 31715992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Original strand, 45041324 - 45041440
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    |||||||||||||| |||||||||||| |  | ||||||||     ||||| ||||||  |||||||| |||||| |||||||||||||||||  |||||    
T  45041324 aaccaagccttatcccactaagtggggtcagctacatggatcaaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacctcta 45041422  T
Q  207 aatcttttttaatagttt 224  Q
    |||||||  |||||||||    
T  45041423 aatctttcctaatagttt 45041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 5908928 - 5908797
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||  |||||| |||| || || ||||||||     ||||| |||| ||||||||||| | |||| || |||||||||||||    
T  5908928 acaacaacaaccaagccttattccactaattgggtccaactacatggatccaattacgcaataaggttctatcataaatcatattttgatccaactcatt 5908829  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | ||  |  ||||||||||||||||| |||||    
T  5908828 aatccttggatcttttttaatagtttctctta 5908797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 33827821 - 33827888
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||| || ||||||| |||||| ||| ||||| |||||||||||||| |||||    
T  33827821 tgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctctta 33827888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 35643670 - 35643737
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||| || |||||||||||||| |||||| |||||| |||||| ||| |||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaataatttctctta 35643737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 23492316 - 23492202
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| || |||||||||||||||||||||||| || | |||||||||     || | ||| |||||||||||||| |||| ||  ||||||||||||    
T  23492316 acaacaacaaacaagccttatctcactaagtggggtcggctacatggattaaatgacaccatagtgttctatcatatatcatatttctatccaactcatt 23492217  T
Q  199 attctctaaatcttt 213  Q
    | || ||| ||||||    
T  23492216 aatcgctacatcttt 23492202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 211
Target Start/End: Complemental strand, 44529509 - 44529395
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||    
T  44529509 ctacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcataaaccaaatttggatccaactca 44529410  T
Q  197 ttattctctaaatct 211  Q
    ||   ||||||||||    
T  44529409 ttgacctctaaatct 44529395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Complemental strand, 36069832 - 36069759
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||  ||||||||||||||| |||||| ||  | ||||||||||| ||||||||| ||| ||||||||||    
T  36069832 attacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagttt 36069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 36545431 - 36545306
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  36545431 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcatt 36545332  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  36545331 gacctctaaatcctttctaatggttt 36545306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 38391945 - 38392018
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||| ||||| ||||||||||||||||| || ||||| |||||||| ||| || |||||| ||||| ||||    
T  38391945 attacgccataatattctatcatataccatatttcgatcccactcattaatctgtagatctttcttaatggttt 38392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 42469727 - 42469852
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| || ||||||||| |  | |||||||| |     ||| ||| |||||||||| | |||||| ||||||||||||||||    
T  42469727 acaacaacaaccaagccttatcccaataagtggggtcagctacatggatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcatt 42469826  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  42469827 gacctctaaatcttttctaatggttt 42469852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 12025995 - 12025920
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcat 239  Q
    |||||||||| | |||||| |||||||||||| |||   ||||||||||||| |||| |||| ||||||||||||||    
T  12025995 tgttctatcaaaaaccatatttggatccaacttattgacctctaaatcttttctaatggttt-tcttaggtcttcat 12025920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 16705978 - 16705898
Alignment:
Q  151 attacgctataatgttctatc-atataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||||||||| ||| |||||||||| || |||||||||||||| ||||||  | ||| |||||||||| |||||    
T  16705978 attacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 28169614 - 28169543
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||| || ||||||| |||||| ||| ||||||||||||| |||| ||||||||  ||||||||| |||||    
T  28169614 ataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctctta 28169543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 9904942 - 9905012
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    |||||||| ||||||| ||| || || ||||||| |||||| | ||||||||||| |||||||||| ||||    
T  9904942 ataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctctt 9905012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 227
Target Start/End: Original strand, 35825522 - 35825584
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 227  Q
    |||||||||| || ||| || | | |||||||||| |||||||||||||| ||||||||||||    
T  35825522 ttctatcataaacaatattttggttcaactcattagtctctaaatcttttctaatagtttatc 35825584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 12966381 - 12966434
Alignment:
Q  166 tctatcatataccatagttggatccaactcattattctctaaatcttttttaat 219  Q
    ||||||||| |||||| ||| || |||||||||| ||||||||||||| |||||    
T  12966381 tctatcataaaccatatttgaattcaactcattaatctctaaatctttcttaat 12966434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 27037862 - 27037789
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatc 227  Q
    |||| ||||| |||||||| |||||||| ||  ||||||||||||| ||| || ||||||  ||||||||||||    
T  27037862 acgccataatattctatcaaataccatatttctatccaactcattaatctttatatctttcctaatagtttatc 27037789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 33076346 - 33076267
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttcatc 240  Q
    ||||| |||||| ||| |||||| || | | |||||||||| ||||||||||| |||||||||||| || ||||||||||||    
T  33076346 ataatattctattataaaccatattttggtacaactcattaatctctaaatct-ttttaatagtttttc-taggtcttcatc 33076267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 35362702 - 35362775
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||| |||||||||||||||| |||||| ||   |||||||||||| | || ||||||||  |||||||||    
T  35362702 attacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagttt 35362775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 41971850 - 41971915
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||| || ||| ||   |||||||||||| ||||||||||||| ||| ||||||    
T  41971850 ataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctttcttagtagttt 41971915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 171
Target Start/End: Original strand, 1928587 - 1928659
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatc 171  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||| |||||||||||||    
T  1928587 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatc 1928659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 10079970 - 10080038
Alignment:
Q  162 atgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||| ||| |||| ||  ||||||||||||| |||||| |||||| |||| ||||| |||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttctta 10080038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 14742082 - 14742130
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  14742082 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 14742130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 42584581 - 42584541
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  42584581 ataatgttctatcataaaccatatttggatccaaatcatta 42584541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 105 - 230
Target Start/End: Original strand, 26037506 - 26037636
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||| |||||| ||||||| |||||||||||| || | ||||||||     ||||| ||| |||||||||||| |||||| ||||||||||||||||     
T  26037506 caacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaattacgccatagtgttctatcataaaccatatttggatccaactcattc 26037605  T
Q  200 ttctctaaatcttttttaatagtttatctta 230  Q
      ||||||||||||  ||||||||| |||||    
T  26037606 acctctaaatctttcctaatagtttctctta 26037636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 220
Target Start/End: Complemental strand, 55008028 - 55007907
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||     ||||  |||||| ||||||||| |||||| || | |||||||||||    
T  55008028 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgtcataatgatctatcataaaccatatttcggtccaactcatt 55007929  T
Q  199 attctctaaatcttttttaata 220  Q
    | ||||||||||||| ||||||    
T  55007928 aatctctaaatctttcttaata 55007907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 31959814 - 31959939
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  31959814 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 31959913  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||||||||    
T  31959914 gacctctaaatcctttctaatagttt 31959939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 208
Target Start/End: Original strand, 34208269 - 34208378
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| || |||| |||| |||  |||||||| |     ||| |||||||||||||||| |||||| ||||||||||||||||    
T  34208269 acaacaacaaccaagccttatcccaataaggggggtcgagtacatggatcaaattgcgccataatgttctatcataaaccatatttggatccaactcatt 34208368  T
Q  199 attctctaaa 208  Q
    | ||||||||    
T  34208369 aatctctaaa 34208378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 219
Target Start/End: Original strand, 48622542 - 48622663
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatt-----acgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | |||||||||     |||| ||| |||||||||||| |||| | ||||||| |||||||    
T  48622542 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggattaaatgacgccatagtgttctatcatacaccaaatttggatcaaactcat 48622641  T
Q  198 tattctctaaatcttttttaat 219  Q
    |   ||||||||||||| ||||    
T  48622642 tgacctctaaatcttttctaat 48622663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 223
Target Start/End: Complemental strand, 25575106 - 25574982
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||| ||||| |  | ||||||||     ||| | | |||||||||||||| |||||| || |||||||||||||    
T  25575106 acaacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccacaatgttctatcataaaccatatttcgatccaactcatt 25575007  T
Q  199 attctctaaatcttttttaatagtt 223  Q
    | |||||| |||||| |||||||||    
T  25575006 aatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 26024851 - 26024975
Alignment:
Q  105 caacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatta 199  Q
    |||||| |||||||||||||| ||||||||| || || | ||||||||     ||| | |||||||||||||||| |||||   | ||||||||||||||    
T  26024851 caacaacaaccaagccttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctatcataaaccatgtctcgatccaactcatta 26024950  T
Q  200 ttctctaaatcttttttaatagttt 224  Q
     |||||| |||||| ||||||||||    
T  26024951 atctctagatctttcttaatagttt 26024975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 27049229 - 27049301
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    ||||||| ||||||||| |||||| |||||| ||||| ||||||||||| ||| ||||||||| |||||||||    
T  27049229 attacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  106 aacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattat 200  Q
    ||||| |||||||||||||| |||||||||||| |||| ||||||     ||||| | | |||||||||||||| | |||| || |||| |||||||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccacaatgttctatcataaatcatatttcgatctaactcattaa 55388312  T
Q  201 tctctaaatcttttttaatag 221  Q
    |||| |||||||| |||||||    
T  55388313 tctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 237
Target Start/End: Complemental strand, 31459273 - 31459139
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| |||||||||||||| |||||||||||| ||   |||||||| |     ||| ||||||||| |||| | |||||| | ||||||||||||||| |    
T  31459273 acaacaaccaagccttatcccactaagtggggtcgggtacatggatcaagttccgccataatgttcaatcacacaccatattgggatccaactcattaat 31459174  T
Q  202 ctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    ||||||||||||  ||||||||| || |||||||||    
T  31459173 ctctaaatctttcctaatagtttttc-taggtcttc 31459139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 35690553 - 35690422
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     ||||| |||||||||||||||| ||| |  ||||||| ||||||||    
T  35690553 acaacaaaaaccaagtcttatcccactaagtggggtcggctacatggatcaaattacgccataatgttctatcataaaccctgattggatcaaactcatt 35690454  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    |  |||||||| |||  ||||||||| |||||    
T  35690453 aacctctaaatttttcgtaatagtttctctta 35690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 37488373 - 37488242
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| ||||||||||||| | | ||||||     ||||||| |||||| ||||||||  |||||| || |||| |||| |||    
T  37488373 acaacaacaaccaagccttatcccactaagtggggctggctacatggatcaaattacgccataatgctctatcattaaccatattttgatcaaacttatt 37488274  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | | |||| |||||| |||||||||| |||||    
T  37488273 aatttctagatctttcttaatagtttctctta 37488242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 39100536 - 39100635
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| |||||||||||| ||| || ||| ||||||||||||||||    
T  39100536 acaacaacaaccaagccttatcccactaagtggggtcggctacatggattatattacgccataatgttctatgataaacaatatttggatccaactcatt 39100635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 230
Target Start/End: Complemental strand, 39708707 - 39708584
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||| |||||| |||||||||||| |||| ||||||||     ||||  ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  39708707 aaccaagtcttatcccactaagtggggtcgactacatggatcaaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctcta 39708608  T
Q  207 aatcttttttaatagtttatctta 230  Q
    |||| ||| |||| |||| |||||    
T  39708607 aatcctttctaatggtttctctta 39708584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 31043290 - 31043224
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    |||||||||| | |||||| ||||||||||||||||| |||||||||||||  ||||||||| ||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctctt 31043224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 45204900 - 45204970
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||||| |||||| |||||||||||| ||||  ||||||||||||  ||||||||| |||||    
T  45204900 taatgttctatcataaaccatatttggatccaacttattaaactctaaatctttcctaatagtttctctta 45204970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 1777017 - 1777142
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| || ||||||||| || | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  1777017 acaacaacaaccaagccttatcccattaagtggggtcggctacatggatcaaatgacgccatactgttctatcatacaccaaatttggatccaactcatt 1777116  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  1777117 gacctctaaatcttttctaatggttt 1777142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 30621261 - 30621326
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||| |||||| || | |||||| ||||| ||||||||||||| ||||||||||    
T  30621261 ataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagttt 30621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 52569515 - 52569640
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  52569515 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 52569614  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  52569615 gacctctaaatcctttctaatggttt 52569640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 56439623 - 56439696
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||||||||| |||||| || ||||||||| |||| | || ||||||||  |||||||||    
T  56439623 attacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagttt 56439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 42639075 - 42639150
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    |||| |||||||||||||| |||||||| ||  ||||||||||||| || ||| |||||| |||||||||| ||||    
T  42639075 acgccataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctctt 42639150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 198
Target Start/End: Original strand, 47265195 - 47265294
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    |||||||||||||||||||||| ||||||||| || || | ||||||     ||||| ||||| |||||||||||| | || | ||||||||||||||||    
T  47265195 acaacaataaccaagccttatcccactaagtgaggtcggctacatggatcaaattacactatagtgttctatcatagatcaaatttggatccaactcatt 47265294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 49987638 - 49987559
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| |||||| ||||||||  |||||||||||||||| ||||||  |||| || ||||| |||||||||| |||||    
T  49987638 attacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctctta 49987559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 51421952 - 51421881
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||  |||||||||| ||||||  ||||||||||||  ||||||||| |||||    
T  51421952 ataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctctta 51421881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 53518375 - 53518437
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||||| ||| |||||||||||| |||||| || ||||||||||||||  ||||||||||||    
T  53518375 attacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatcttt 53518437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 8286721 - 8286596
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||  ||| |||||||||||| |||| | ||||||||||||||||    
T  8286721 acaacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatgacgtcatagtgttctatcataaaccaaatttggatccaactcatt 8286622  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  8286621 gacctctaaatcctttctaatggttt 8286596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 21528570 - 21528445
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||| |     | | ||| |||||||||| | |||||| ||| ||||||||||||    
T  21528570 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgccaccatagtgttctatcaaaaaccatatttgaatccaactcatt 21528471  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  21528470 gacctctaaatcttttctaatggttt 21528445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 55768555 - 55768624
Alignment:
Q  155 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55768555 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55768624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 55832811 - 55832880
Alignment:
Q  155 cgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||||| |||||| || |||||||||||||  ||| ||| ||||| |||| |||||    
T  55832811 cgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagttt 55832880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Complemental strand, 26510610 - 26510558
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatct 211  Q
    |||||||||||||  | |||||| ||||||||||||||||| |||||||||||    
T  26510610 ataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 37042667 - 37042795
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| |||||||||||||| |||||||| ||| || | |||||||| |     | | |||||||||||||| ||||| || ||  |||||||||| || |    
T  37042667 acaacaaccaagccttatcccactaagtcgggtcggctacatggatcaaacgacaccataatgttctatcaaataccgtatttctatccaactcaataat 37042766  T
Q  202 ctctaaatcttttttaatagtttatctta 230  Q
    ||||| |||||| |||||||||| |||||    
T  37042767 ctctagatctttcttaatagtttctctta 37042795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 206
Target Start/End: Complemental strand, 5306526 - 5306471
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||| ||||||    
T  5306526 attacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 21107214 - 21107143
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||| ||||||||||| |||||| |||||||||||| |||| || ||||| ||||  ||||||||| |||||    
T  21107214 ataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctctta 21107143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 31339746 - 31339699
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||||||    
T  31339746 ataatgttctatcatgtaccatatttcgatccaactcattaatctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 40420275 - 40420343
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||||| |||||| | |||| |||||||||| |||||  || |||||||||||||| |||||    
T  40420275 taatgttctatcataaaccatattaggattcaactcattaatctct--attttttttaatagtttctctta 40420343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 47372873 - 47372802
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||||||| ||  ||||||||||||| |||||  |||||| ||| |||||| |||||    
T  47372873 ataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctctta 47372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 53540512 - 53540441
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| ||   |||||||||||| |||| || |||||  |||||||||||||||    
T  53540512 ataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatctta 53540441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 21237085 - 21237015
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||| ||| ||||||||||||||||| | ||||||||||||||||   ||||||||| ||| |||| ||||    
T  21237085 acgccatagtgttctatcatataccaaatttggatccaactcattgacctctaaatcctttctaatggttt 21237015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 213
Target Start/End: Complemental strand, 41192283 - 41192229
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||||||||| ||||||||||| ||  ||||||||||||| |||||| ||||||    
T  41192283 ataatgttctaccatataccatatttctatccaactcattaatctctagatcttt 41192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 47147593 - 47147530
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||| ||||  |  ||||||||||||| |||||| |||||| ||||||||||    
T  47147593 ataatgttctatcatatatcatatct--atccaactcattaatctctagatctttcttaatagttt 47147530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 28550521 - 28550586
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||| | |||||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  28550521 ttctatcaaaaaccatatttggatcaaactcattaacctctaaatctttcctaatagtttctctta 28550586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 34233076 - 34233149
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    ||||||||| |||||||||||||| ||| || || |||| ||||||||| ||||||  ||||| | ||||||||    
T  34233076 attacgctacaatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagttt 34233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 41729504 - 41729549
Alignment:
Q  153 tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  41729504 tacgccatagtgttctatcataaaccatatttggatccaactcatt 41729549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 137
Target Start/End: Original strand, 48451073 - 48451106
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggg 137  Q
    ||||||| ||||||||||||||||||||||||||    
T  48451073 acaacaacaaccaagccttatctcactaagtggg 48451106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 56130452 - 56130403
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatt 153  Q
    ||||||| |||||||||||||| |||||||||||| || | |||||||||    
T  56130452 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatt 56130403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 436511 - 436463
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  436511 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 436463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 30634106 - 30634154
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  30634106 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 30634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 33225895 - 33225964
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| | |||| || |||  ||||| ||| ||||||||||||| |||||||||| |||||    
T  33225895 ataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctctta 33225964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 43434206 - 43434158
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||  |||| ||||||||    
T  43434206 acaacaacaaccaagccttatcccactaagtgggctcgactacatggat 43434158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 44385052 - 44384988
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    |||||||||||||||| |||||| |   |||||||| |||| |||||| |||||| |||||||||    
T  44385052 ataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatagtt 44384988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 45209205 - 45209253
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  45209205 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 45209253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 46153990 - 46153942
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  46153990 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 46153942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 50238615 - 50238663
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  50238615 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 50238701 - 50238749
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  50238701 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 50238749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 418086 - 418148
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||||| |||||||||||||||| |||| | ||||||||||||||||| |||||||||||||    
T  418086 attacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatcttt 418148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 13561386 - 13561511
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| || ||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||| | |||||||||||||||||||||||    
T  13561386 acaacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcaaaaaccatagttggatccaactcatt 13561485  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||||||| |||| ||||    
T  13561486 gacctctaaatcttttctaatggttt 13561511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 9235269 - 9235197
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatcttag 231  Q
    |||||||||||||||| |||||| || |||||| ||||||| |||||| |||||| |||||||||| ||||||    
T  9235269 ataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctcttag 9235197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 11675812 - 11675680
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagtt-ggatccaactcat 197  Q
    ||||||| ||||||||||||||  ||||||||||| || | ||||||||     ||||| |||||||||||||||| |||||| ||   |||||||||||    
T  11675812 acaacaacaaccaagccttatccaactaagtggggtcggctacatggattaaactacgccataatgttctatcataaaccatatttaaaatccaactcat 11675713  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    || ||||||||||| |  ||||||||| |||||    
T  11675712 taatctctaaatctgtcctaatagtttctctta 11675680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 14667993 - 14667922
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||||| |||||| ||| ||| || |||||    
T  14667993 ataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctctta 14667922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 3302127 - 3302001
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | |||||||| |     |||  || |||||||||| | |||||| |||||||||||||||    
T  3302127 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccgtagtgttctatcaaaaaccatatttggatccaactcat 3302028  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||||||| |||| ||||    
T  3302027 tgacctctaaatcttttataatggttt 3302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 12576920 - 12576990
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    |||||| |||||||||||||||| ||  || |||||||||| |||||| |||||| |||||||||||||||    
T  12576920 ataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatctt 12576990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 2915496 - 2915620
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    |||||||||||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  2915496 acaacaataaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcata-accaaatttggatccaactcatt 2915594  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  2915595 gacctctaaatcctttctaatggttt 2915620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 29816664 - 29816539
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  29816664 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 29816565  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  29816564 gacctctaaatcctttctaatggttt 29816539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 38685241 - 38685124
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcattattctcta 206  Q
    |||||||||||||| |||||||||||| || | |||||||| |     ||| ||| |||||||||||| |||||| ||||||||||||||||   |||||    
T  38685241 aaccaagccttatcccactaagtggggtcggctacatggatcaaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctcta 38685142  T
Q  207 aatcttttttaatagttt 224  Q
    |||| ||| |||| ||||    
T  38685141 aatcctttctaatggttt 38685124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 17340496 - 17340560
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    |||||||| ||||||| |||||| ||||||| |||||||||  |||||||||||| |||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagtt 17340560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 6889223 - 6889144
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| |||||||||||||||| |||||| || |  |||||| |||| |||||||||||||  ||||||||| |||||    
T  6889223 attacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctctta 6889144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 14725736 - 14725669
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||| |||||| |||||| || ||||||||||||||  || |||||||||| |||||||||||||||    
T  14725736 tgttcgatcataaaccatattttgatccaactcattaacctttaaatcttttataatagtttatctta 14725669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 190
Target Start/End: Complemental strand, 18855889 - 18855798
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatcc 190  Q
    ||||||| ||||||| |||||| |||||||||||| || | ||||||||     || ||||||||||||||||||| |||||| ||||||||    
T  18855889 acaacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaattatgctataatgttctatcataaaccatatttggatcc 18855798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 1287583 - 1287704
Alignment:
Q  108 caataaccaagccttatctcactaagtggggccgacgacatgga-----ttacgctataatgttctatcatataccatagttggatccaactcattattc 202  Q
    |||||||||||||||||| |||||||||||| || | |||||||     | |||| ||| ||| |||||||| |||| | ||||||||||||||||   |    
T  1287583 caataaccaagccttatcccactaagtggggtcggctacatggatcaactgacgccatagtgtactatcatacaccaaatttggatccaactcattgacc 1287682  T
Q  203 tctaaatcttttttaatagttt 224  Q
    |||||||| ||| |||| ||||    
T  1287683 tctaaatcctttctaatggttt 1287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 4496666 - 4496541
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||||    
T  4496666 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcatacaccaaatttggatccaactcatt 4496567  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  4496566 gacctctaaatcctttctaatggttt 4496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 43557830 - 43557947
Alignment:
Q  101 actacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactc 195  Q
    |||||||||| ||||| |||||||| |||||||||||| || | |||| |||     || |  |||||||||||||||| |||||| || ||||||||||    
T  43557830 actacaacaacaaccaggccttatcccactaagtggggtcggctacatagatcaacttaagtcataatgttctatcataaaccatatttcgatccaactc 43557929  T
Q  196 attattctctaaatcttt 213  Q
    | || |||| ||||||||    
T  43557930 aataatctccaaatcttt 43557947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 230
Target Start/End: Complemental strand, 5303729 - 5303595
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta------cgctataatgttctatcatataccatag--ttggatccaactc 195  Q
    ||||||| ||||| | |||||| |||||||||||  || | ||||||||||      ||| ||||| |||||||||||||||||   ||  |||||||||    
T  5303729 acaacaacaaccaggacttatcccactaagtgggatcggctacatggattaaaacaacgccataatattctatcatataccatatatttctatccaactc 5303630  T
Q  196 attattctctaaatcttttttaatagtttatctta 230  Q
    ||||  |||||||||||||| |||||||| |||||    
T  5303629 attaaactctaaatctttttcaatagtttctctta 5303595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 199
Target Start/End: Original strand, 32442126 - 32442225
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||||||||||| |||||| |||||||||| | || | ||||||     ||||||| |||||||||||||  | |||||| ||||||||||||||||    
T  32442126 acaacaataaccaag-cttatcccactaagtggagtcggctacatggatcaaattacgccataatgttctatccaaaaccatatttggatccaactcatt 32442224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 36551428 - 36551380
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| ||||||||||||||||||||||||||| || | ||||||||    
T  36551428 acaacaacaaccaagccttatctcactaagtggggtcggctacatggat 36551380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 5558415 - 5558324
Alignment:
Q  112 aaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    |||||||||||||| |||||||||||| || | ||||||||     || || ||| |||||||||||| |||||| |||||||| |||||||    
T  5558415 aaccaagccttatcccactaagtggggtcggctacatggatcaaattatgccatagtgttctatcataaaccatatttggatcctactcatt 5558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 23980162 - 23980095
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||| |||||| || |||||||||||||| ||| |||||| || | |||||||| |||||    
T  23980162 tgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctctta 23980095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 28186863 - 28186906
Alignment:
Q  187 atccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||||| ||||||||||||| |||||||||| |||||    
T  28186863 atccaactcattaatctctaaatctttcttaatagtttctctta 28186906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 38132618 - 38132543
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcata 174  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||||||||||||||||    
T  38132618 acaacaacaaccaagccttatcccactaagtggggtcggccacatggatcaaattacgccataatgttctatcata 38132543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 41894277 - 41894234
Alignment:
Q  170 tcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||    
T  41894277 tcataaaccatatttggatccaactcattaatctctaaatcttt 41894234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 9460828 - 9460862
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtgggg 138  Q
    ||||||||||||||||||||||| |||||||||||    
T  9460828 acaacaataaccaagccttatcttactaagtgggg 9460862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Complemental strand, 35615505 - 35615440
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||| || ||| ||  ||||||||||||| ||||||||| ||| | ||||||||    
T  35615505 ataatgttctatcataaactatatttttatccaactcattaatctctaaatttttatgaatagttt 35615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 36200934 - 36200874
Alignment:
Q  176 accatagttggatccaactcattattctctaaatcttttttaatagtttatcttaggtcttc 237  Q
    |||||| |||||||||||||||||  ||||| ||||||| ||||||||| || |||||||||    
T  36200934 accatatttggatccaactcattaacctctatatcttttataatagtttttc-taggtcttc 36200874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 408494 - 408542
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  408494 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 2645272 - 2645224
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||| |||||| | ||||||||    
T  2645272 acaacaacaaccaagccttatcccactaagtagggccggctacatggat 2645224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 138
Target Start/End: Complemental strand, 32489330 - 32489294
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtgggg 138  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  32489330 ctacaacaacaaccaagccttatcccactaagtgggg 32489294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 38830601 - 38830504
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    ||||||| |||||| |||| || |||||||||||| |  | ||||||    |||||||||||||||||||||||| | |||| || | ||||||||||    
T  38830601 acaacaacaaccaaaccttttcccactaagtggggtcagctacatggatcaattacgctataatgttctatcatacatcatatttcggtccaactcat 38830504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 230
Target Start/End: Original strand, 34505 - 34636
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| ||||||| |||||| |||||||||||| |  | ||||||||     ||||| |||||||||||||||| |||||| ||  ||||||||||||    
T  34505 acaacaacaaccaagtcttatcccactaagtggggtcagctacatggatcaaattacgccataatgttctatcataaaccatatttcaatccaactcatt 34604  T
Q  199 attctctaaatcttttttaatagtttatctta 230  Q
    | ||| || |||||| ||||| |||| |||||    
T  34605 aatctttagatctttcttaatggtttctctta 34636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 230
Target Start/End: Original strand, 9593768 - 9593839
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    |||||||||||||||| |||||| | ||||||||||||||| ||||||| |||||  ||||||||| |||||    
T  9593768 ataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctctta 9593839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 12890857 - 12890758
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     ||||||| ||| |||||||||||| |||||| ||||||| ||||||||    
T  12890857 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttggatctaactcatt 12890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 34143765 - 34143890
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  34143765 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34143864  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  34143865 gacctctaaatcctttgtaatggttt 34143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 34156381 - 34156506
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| || ||||||||| |||| ||||||     || |||| ||| |||||||||||| |||| | ||||||||||||||||    
T  34156381 acaacaacaaccaagccttatcccaataagtggggtcgactacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 34156480  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  34156481 gacctctaaatcctttgtaatggttt 34156506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 210
Target Start/End: Complemental strand, 9707053 - 9706941
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||| | |||||| |||||||||||||||    
T  9707053 tacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgatgccatagtgttctatcaaaaaccatatttggatccaactcat 9706954  T
Q  198 tattctctaaatc 210  Q
    ||  |||||||||    
T  9706953 taacctctaaatc 9706941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 31818814 - 31818682
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||| || || | |||||||||| || | ||||||||     ||||  |||||||||||||||| |||||| || ||||||||||||    
T  31818814 tacaacaacaaccaagctttttcccgctaagtggggtcggctacatggatcaaattacgacataatgttctatcataaaccatactttgatccaactcat 31818715  T
Q  198 tattctctaaatcttttttaatagtttatctta 230  Q
    || |||| ||| ||||  ||||||||| |||||    
T  31818714 taatctccaaacctttcctaatagtttctctta 31818682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 214
Target Start/End: Original strand, 3206459 - 3206574
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||||||||||| |||||| |||||||||||| || | ||||||     || |||| ||| |||||||| | | |||||| ||||||||||||||||    
T  3206459 acaacaataaccaagtcttatcccactaagtggggtcggctacatggatcaaatgacgccatagtgttctattaaaaaccatatttggatccaactcatt 3206558  T
Q  199 attctctaaatctttt 214  Q
       |||||||||||||    
T  3206559 gacctctaaatctttt 3206574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 213
Target Start/End: Complemental strand, 5096117 - 5096002
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggat-----tacgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||| ||||||| |||||||||||  || | |||| |||     ||||| |||||||||||||||| |||||| || ||||||||||||    
T  5096117 tacaacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaattacgccataatgttctatcataaaccatattttgatccaactcat 5096018  T
Q  198 tattctctaaatcttt 213  Q
    ||  | ||||||||||    
T  5096017 taaccactaaatcttt 5096002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 159 - 229
Target Start/End: Complemental strand, 24666033 - 24665963
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    |||||||||||||||| |||||| || |||||||||||||   |||||||| ||| |||||||||| ||||    
T  24666033 ataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctctt 24665963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 224
Target Start/End: Original strand, 14389213 - 14389286
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||  ||||||| ||||||| |||||| ||||||| |||| |||| ||||||||||||| |||| |||||    
T  14389213 attacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagttt 14389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 224
Target Start/End: Complemental strand, 28085658 - 28085533
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||     || || | ||| |||||||||||| |||| | ||||||||||||||||    
T  28085658 acaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgacaccatagtgttctatcatacaccaaatttggatccaactcatt 28085559  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       ||||||||| ||| |||| ||||    
T  28085558 gacctctaaatcctttctaatggttt 28085533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 198
Target Start/End: Original strand, 34934828 - 34934929
Alignment:
Q  102 ctacaacaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactca 196  Q
    ||||||||| |||||||||||||| |||||||||||| || | ||||||     || | || ||| |||||||||||| |||| | ||||||||||||||    
T  34934828 ctacaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatgaggccatagtgttctatcatacaccaaatttggatccaactca 34934927  T
Q  197 tt 198  Q
    ||    
T  34934928 tt 34934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 230
Target Start/End: Original strand, 43119 - 43183
Alignment:
Q  166 tctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||| || ||| || |||||||||||||| |||||| |||||| |||||||||| |||||    
T  43119 tctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 1748006 - 1748070
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||||||| ||| ||  ||||||||||||| ||||||||| ||| ||| ||||||    
T  1748006 taatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagttt 1748070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 5897679 - 5897615
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtt 223  Q
    ||||| ||||| ||||||||||| || |||||||| ||||| | |||||||||||| ||||||||    
T  5897679 ataatattctaccatataccatattttgatccaacacattaatatctaaatcttttctaatagtt 5897615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 8364786 - 8364707
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| |||||||||||||||| |||||  ||   ||||||| |||| | ||||||||||| |||||||||| |||||    
T  8364786 attacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctctta 8364707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 6055832 - 6055902
Alignment:
Q  160 taatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||||||| ||| || ||| ||||||| |||||||||  ||||||||||||  ||||||||| |||||    
T  6055832 taatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctctta 6055902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 30031535 - 30031413
Alignment:
Q  107 acaataaccaagccttatctcactaagtggggccgacgacatgg-----attacgctataatgttctatcatataccatagttggatccaactcattatt 201  Q
    |||| |||||||||||||| ||||||||| || || | ||||||     ||||||| ||| |||||||||||| |||||| ||  ||||||||||||       
T  30031535 acaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaattacgccatagtgttctatcataaaccatatttaaatccaactcattgac 30031436  T
Q  202 ctctaaatcttttttaatagttt 224  Q
    ||||||||| ||| |||| ||||    
T  30031435 ctctaaatcctttctaattgttt 30031413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 32756148 - 32756078
Alignment:
Q  154 acgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||| ||| |||||||||||| |||| | ||||||||||||||||   ||||||||||||| |||| ||||    
T  32756148 acgccatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcttttctaatggttt 32756078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 9568929 - 9568872
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaa 208  Q
    ||||||| |||| | ||||||||| |||||| |||||||||||||| || ||||||||    
T  9568929 attacgccataacggtctatcataaaccatatttggatccaactcaataatctctaaa 9568872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 10098958 - 10099019
Alignment:
Q  163 tgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||| |||||| ||  ||||||||||||   |||||||||||||||||| ||||    
T  10098958 tgttctatcatacaccatatttaaatccaactcattgacctctaaatcttttttaatggttt 10099019  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 12133902 - 12133950
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| ||||||||||| ||||||||||||||| || | ||||||||    
T  12133902 acaacaacaaccaagccttttctcactaagtggggtcggctacatggat 12133950  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 18238210 - 18238270
Alignment:
Q  165 ttctatcatataccatagttggatccaactcattattctctaaatcttt-tttaatagttt 224  Q
    |||||||||||| |||| ||  ||||||||||||| ||| ||||||||| |||||||||||    
T  18238210 ttctatcatatatcatatttttatccaactcattaatctgtaaatctttctttaatagttt 18238270  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 20864867 - 20864835
Alignment:
Q  106 aacaataaccaagccttatctcactaagtgggg 138  Q
    ||||| |||||||||||||||||||||||||||    
T  20864867 aacaacaaccaagccttatctcactaagtgggg 20864835  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Original strand, 31831920 - 31831984
Alignment:
Q  161 aatgttctatcatata-ccatagttggatccaactcattattctctaaatcttttttaatagttt 224  Q
    |||||||||||||| | ||||  |||||||||||||| || |||||| |||||| ||||||||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagttt 31831984  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 33730247 - 33730199
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  33730247 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 33730199  T

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Target: scaffold0570 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 224
Target Start/End: Original strand, 948 - 1073
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcatt 198  Q
    ||||||| |||||||||||||| |||||| ||||| |  | |||||||| |     ||| ||| |||||||||||| |||| | ||||||||||||||||    
T  948 acaacaacaaccaagccttatcccactaaatggggtcagctacatggatcaaatgacgccatagtgttctatcatacaccaaatttggatccaactcatt 1047  T
Q  199 attctctaaatcttttttaatagttt 224  Q
       |||||||||||||||||| ||||    
T  1048 gacctctaaatcttttttaatggttt 1073  T

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Target: scaffold0041 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 224
Target Start/End: Complemental strand, 16861 - 16735
Alignment:
Q  103 tacaacaataaccaagccttatctcactaagtggggccgacgacatggatta-----cgctataatgttctatcatataccatagttggatccaactcat 197  Q
    |||||||| |||||||||||||| |||||||||| | || | |||| ||| |     ||| ||| |||||||||| | |||||| |||||||||||||||    
T  16861 tacaacaacaaccaagccttatcccactaagtggagtcggctacatagatcaaatgacgccatagtgttctatcaaaaaccatatttggatccaactcat 16762  T
Q  198 tattctctaaatcttttttaatagttt 224  Q
    |   ||||||||||||| |||| ||||    
T  16761 tgacctctaaatcttttctaatggttt 16735  T

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Target: scaffold0279 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 17733 - 17690
Alignment:
Q  187 atccaactcattattctctaaatcttttttaatagtttatctta 230  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||    
T  17733 atccaacccattaatctctaaatcttttttaatagtttctctta 17690  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 25503 - 25569
Alignment:
Q  159 ataatgttctatcatataccatagttggatccaactcattattctctaaatc-ttttttaatagttt 224  Q
    |||||||| ||||||||| | || ||  ||||||||||||| |||||||||| ||||||||||||||    
T  25503 ataatgttttatcatataacttatttctatccaactcattaatctctaaatcattttttaatagttt 25569  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 39549 - 39487
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttt 213  Q
    ||||||| || ||||||||||||| |||| | |||||||||||||||||   |||||||||||    
T  39549 attacgccatcatgttctatcataaaccacatttggatccaactcattaccatctaaatcttt 39487  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Original strand, 160376 - 160454
Alignment:
Q  151 attacgctataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctt 229  Q
    ||||||| |||||||||||||||| |||||| || | || ||||||||| | ||| |||||||  ||||||||| ||||    
T  160376 attacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctctt 160454  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 28889 - 28937
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  28889 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 28937  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Complemental strand, 31750 - 31702
Alignment:
Q  104 acaacaataaccaagccttatctcactaagtggggccgacgacatggat 152  Q
    ||||||| |||||||||||||| |||||||||||| || | ||||||||    
T  31750 acaacaacaaccaagccttatcccactaagtggggtcggctacatggat 31702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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