View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_low_18 (Length: 465)

Name: NF19103_low_18
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_low_18
NF19103_low_18
[»] scaffold0051 (5 HSPs)
scaffold0051 (20-452)||(6742-7174)
scaffold0051 (20-452)||(676-1109)
scaffold0051 (20-452)||(3553-3986)
scaffold0051 (20-452)||(7725-8157)
scaffold0051 (180-452)||(8501-8775)
[»] chr2 (67 HSPs)
chr2 (27-249)||(11514912-11515133)
chr2 (23-245)||(13018466-13018687)
chr2 (27-241)||(37194142-37194356)
chr2 (23-248)||(26905673-26905897)
chr2 (60-247)||(6655988-6656176)
chr2 (27-246)||(43572536-43572758)
chr2 (27-247)||(40211874-40212092)
chr2 (26-248)||(34757474-34757696)
chr2 (69-248)||(4003297-4003475)
chr2 (59-245)||(31082690-31082872)
chr2 (60-216)||(1364734-1364889)
chr2 (23-245)||(21625996-21626218)
chr2 (68-241)||(15555378-15555550)
chr2 (24-242)||(35550147-35550361)
chr2 (29-245)||(16519083-16519297)
chr2 (67-193)||(30523170-30523295)
chr2 (23-172)||(39204960-39205110)
chr2 (83-245)||(39750030-39750184)
chr2 (69-179)||(43190573-43190682)
chr2 (27-123)||(11522172-11522267)
chr2 (23-167)||(28539414-28539557)
chr2 (110-243)||(16625856-16625988)
chr2 (27-179)||(26599241-26599393)
chr2 (67-174)||(41100137-41100243)
chr2 (90-197)||(30072463-30072570)
chr2 (27-133)||(9087457-9087562)
chr2 (23-127)||(4041953-4042057)
chr2 (27-240)||(21834815-21835030)
chr2 (69-133)||(36870246-36870310)
chr2 (27-133)||(725939-726045)
chr2 (28-244)||(1270695-1270911)
chr2 (27-133)||(9087690-9087795)
chr2 (67-243)||(15803065-15803237)
chr2 (67-249)||(16813504-16813683)
chr2 (67-249)||(16852783-16852962)
chr2 (27-133)||(31584758-31584863)
chr2 (102-213)||(18589983-18590093)
chr2 (45-214)||(36642365-36642530)
chr2 (67-197)||(5322151-5322280)
chr2 (23-124)||(8555764-8555865)
chr2 (59-127)||(30312429-30312497)
chr2 (23-127)||(32243464-32243567)
chr2 (27-133)||(12941790-12941896)
chr2 (75-133)||(44954037-44954094)
chr2 (68-133)||(30072095-30072159)
chr2 (23-100)||(44137151-44137228)
chr2 (23-110)||(10165421-10165506)
chr2 (23-99)||(13765927-13766003)
chr2 (203-251)||(32761441-32761489)
chr2 (77-133)||(39819881-39819936)
chr2 (31-110)||(18826222-18826301)
chr2 (27-124)||(22101592-22101687)
chr2 (209-247)||(37201788-37201826)
chr2 (203-248)||(18781640-18781685)
chr2 (203-248)||(36567093-36567138)
chr2 (104-141)||(41656711-41656748)
chr2 (76-133)||(42644640-42644697)
chr2 (203-248)||(44137298-44137343)
chr2 (203-247)||(1365044-1365088)
chr2 (23-127)||(1725899-1726002)
chr2 (81-141)||(3737272-3737331)
chr2 (209-245)||(14008147-14008183)
chr2 (211-247)||(18826047-18826083)
chr2 (23-127)||(25960598-25960702)
chr2 (219-251)||(26599067-26599099)
chr2 (73-133)||(36030796-36030856)
chr2 (23-99)||(43334824-43334900)
[»] chr6 (30 HSPs)
chr6 (17-246)||(33590311-33590537)
chr6 (27-241)||(1567157-1567370)
chr6 (67-243)||(32719408-32719582)
chr6 (16-250)||(24874916-24875146)
chr6 (23-245)||(12779389-12779606)
chr6 (67-216)||(11180191-11180338)
chr6 (67-248)||(6855504-6855683)
chr6 (68-240)||(28551919-28552091)
chr6 (67-245)||(26713735-26713912)
chr6 (68-217)||(20820563-20820710)
chr6 (23-141)||(32221978-32222095)
chr6 (59-197)||(6688060-6688200)
chr6 (27-146)||(2502358-2502478)
chr6 (68-138)||(22788551-22788620)
chr6 (23-127)||(26574383-26574487)
chr6 (27-133)||(4089389-4089494)
chr6 (23-247)||(24734757-24734973)
chr6 (23-127)||(23095116-23095220)
chr6 (69-133)||(24379620-24379684)
chr6 (31-118)||(33184196-33184282)
chr6 (23-109)||(4909903-4909989)
chr6 (203-248)||(29241648-29241693)
chr6 (69-133)||(4464929-4464992)
chr6 (25-97)||(15615686-15615758)
chr6 (23-109)||(1029300-1029386)
chr6 (63-141)||(33212307-33212384)
chr6 (23-83)||(13120410-13120468)
chr6 (23-72)||(19477300-19477349)
chr6 (59-243)||(33754928-33755106)
chr6 (168-248)||(2365730-2365809)
[»] scaffold0248 (1 HSPs)
scaffold0248 (23-243)||(184-403)
[»] chr1 (77 HSPs)
chr1 (23-249)||(36269611-36269836)
chr1 (23-247)||(36886740-36886962)
chr1 (27-247)||(29091957-29092175)
chr1 (67-242)||(17760507-17760682)
chr1 (27-245)||(37649608-37649825)
chr1 (27-216)||(5584406-5584594)
chr1 (27-231)||(41817291-41817493)
chr1 (67-245)||(27255081-27255258)
chr1 (67-248)||(34154360-34154540)
chr1 (27-179)||(46001504-46001655)
chr1 (60-243)||(52068162-52068347)
chr1 (27-136)||(2909098-2909207)
chr1 (59-245)||(17556540-17556724)
chr1 (69-249)||(49102986-49103164)
chr1 (68-197)||(33324553-33324681)
chr1 (67-245)||(52073480-52073657)
chr1 (25-146)||(69704-69824)
chr1 (23-197)||(39886912-39887088)
chr1 (27-142)||(32287555-32287669)
chr1 (68-174)||(50225982-50226088)
chr1 (17-133)||(12625806-12625921)
chr1 (26-197)||(7915432-7915603)
chr1 (67-133)||(28848821-28848887)
chr1 (23-248)||(27499853-27500077)
chr1 (17-133)||(25561300-25561414)
chr1 (62-245)||(12293682-12293864)
chr1 (23-133)||(41432750-41432863)
chr1 (102-247)||(50586918-50587061)
chr1 (30-138)||(4204774-4204881)
chr1 (23-127)||(7963963-7964067)
chr1 (23-127)||(23871451-23871555)
chr1 (75-174)||(37955117-37955216)
chr1 (23-133)||(24436920-24437030)
chr1 (27-133)||(52331032-52331138)
chr1 (23-132)||(19652283-19652392)
chr1 (68-133)||(50476521-50476586)
chr1 (25-133)||(27102814-27102922)
chr1 (68-132)||(33579219-33579282)
chr1 (23-171)||(41427982-41428129)
chr1 (67-139)||(42333622-42333693)
chr1 (20-127)||(50247584-50247692)
chr1 (33-133)||(51303174-51303274)
chr1 (82-133)||(23412000-23412051)
chr1 (23-249)||(38794838-38795064)
chr1 (25-76)||(38795396-38795447)
chr1 (158-245)||(38795452-38795538)
chr1 (27-116)||(6015430-6015520)
chr1 (76-146)||(43036354-43036423)
chr1 (27-132)||(6537943-6538047)
chr1 (81-146)||(32672584-32672648)
chr1 (203-248)||(33991763-33991808)
chr1 (203-248)||(40136436-40136481)
chr1 (203-248)||(43571784-43571829)
chr1 (152-248)||(28718908-28719004)
chr1 (203-255)||(32299324-32299376)
chr1 (203-255)||(32300276-32300328)
chr1 (23-179)||(33854827-33854982)
chr1 (23-179)||(33925940-33926095)
chr1 (23-127)||(33991530-33991634)
chr1 (23-99)||(39889646-39889722)
chr1 (209-245)||(45565356-45565392)
chr1 (23-110)||(42488615-42488702)
chr1 (211-249)||(51303348-51303386)
chr1 (203-248)||(896312-896357)
chr1 (23-108)||(896483-896568)
chr1 (102-139)||(10449780-10449817)
chr1 (67-132)||(30543385-30543450)
chr1 (216-248)||(2909018-2909050)
chr1 (77-133)||(9595558-9595614)
chr1 (209-245)||(9595788-9595824)
chr1 (209-249)||(15464038-15464078)
chr1 (206-242)||(31920172-31920208)
chr1 (209-245)||(38795192-38795228)
chr1 (209-245)||(39179279-39179315)
chr1 (209-245)||(41432944-41432980)
chr1 (67-127)||(45565119-45565178)
chr1 (68-179)||(47742468-47742580)
[»] chr4 (81 HSPs)
chr4 (67-250)||(29114265-29114448)
chr4 (27-245)||(12708826-12709043)
chr4 (27-243)||(38136826-38137041)
chr4 (27-244)||(30198763-30198979)
chr4 (28-245)||(33500392-33500607)
chr4 (27-247)||(28175456-28175675)
chr4 (27-243)||(16318491-16318706)
chr4 (67-248)||(45823424-45823604)
chr4 (59-243)||(49668128-49668310)
chr4 (59-245)||(46176951-46177136)
chr4 (35-214)||(45971465-45971641)
chr4 (59-243)||(35959072-35959253)
chr4 (27-133)||(42650619-42650725)
chr4 (27-241)||(41709110-41709322)
chr4 (23-248)||(7182179-7182403)
chr4 (23-247)||(55509758-55509970)
chr4 (17-133)||(21443006-21443121)
chr4 (27-146)||(27143147-27143267)
chr4 (67-248)||(21081214-21081399)
chr4 (30-248)||(52636630-52636844)
chr4 (23-248)||(41363800-41364024)
chr4 (103-248)||(16422788-16422931)
chr4 (18-139)||(32866714-32866833)
chr4 (23-245)||(38365901-38366120)
chr4 (68-174)||(51974271-51974375)
chr4 (113-222)||(16461636-16461743)
chr4 (24-124)||(15498783-15498882)
chr4 (67-155)||(18396171-18396258)
chr4 (62-246)||(38317256-38317439)
chr4 (76-135)||(49936496-49936555)
chr4 (23-126)||(56504457-56504559)
chr4 (67-141)||(368044-368117)
chr4 (27-133)||(9119779-9119883)
chr4 (27-135)||(30307354-30307458)
chr4 (23-88)||(32648992-32649057)
chr4 (23-127)||(31530008-31530112)
chr4 (20-127)||(904186-904293)
chr4 (67-146)||(13984996-13985075)
chr4 (27-133)||(3075756-3075860)
chr4 (203-249)||(20534148-20534194)
chr4 (23-97)||(24279933-24280007)
chr4 (24-130)||(42759640-42759746)
chr4 (67-133)||(45899379-45899443)
chr4 (68-133)||(4442012-4442077)
chr4 (24-124)||(15451325-15451422)
chr4 (111-176)||(22165699-22165763)
chr4 (203-248)||(22845047-22845092)
chr4 (17-118)||(42954606-42954707)
chr4 (23-119)||(7485814-7485910)
chr4 (73-133)||(8828236-8828295)
chr4 (27-139)||(11976814-11976926)
chr4 (23-127)||(20533916-20534020)
chr4 (68-124)||(24683019-24683075)
chr4 (203-247)||(31530244-31530288)
chr4 (73-133)||(46176494-46176554)
chr4 (81-133)||(46669991-46670043)
chr4 (20-127)||(41844424-41844531)
chr4 (69-248)||(52430589-52430766)
chr4 (214-248)||(675240-675274)
chr4 (23-109)||(3127000-3127085)
chr4 (23-133)||(13269936-13270046)
chr4 (203-241)||(16535912-16535950)
chr4 (75-133)||(18319712-18319770)
chr4 (75-133)||(18398911-18398969)
chr4 (67-133)||(31428794-31428860)
chr4 (209-247)||(41844662-41844700)
chr4 (203-249)||(48620501-48620547)
chr4 (75-133)||(54205822-54205880)
chr4 (150-248)||(56426823-56426920)
chr4 (203-248)||(24280132-24280177)
chr4 (68-141)||(25843819-25843892)
chr4 (206-243)||(42650517-42650554)
chr4 (62-99)||(48620314-48620351)
chr4 (104-141)||(50494717-50494754)
chr4 (209-249)||(21357976-21358016)
chr4 (69-133)||(27485277-27485340)
chr4 (209-245)||(27485415-27485451)
chr4 (69-197)||(37756747-37756875)
chr4 (203-247)||(38366247-38366291)
chr4 (211-247)||(45899511-45899547)
chr4 (73-133)||(47063676-47063735)
[»] chr5 (57 HSPs)
chr5 (23-249)||(39649438-39649664)
chr5 (27-245)||(35683465-35683682)
chr5 (67-246)||(10437857-10438035)
chr5 (67-245)||(5772752-5772928)
chr5 (67-230)||(14570072-14570234)
chr5 (60-216)||(10842946-10843100)
chr5 (23-243)||(10955678-10955900)
chr5 (23-216)||(38568365-38568552)
chr5 (67-247)||(18675745-18675923)
chr5 (24-168)||(13569312-13569455)
chr5 (27-196)||(8943967-8944134)
chr5 (23-184)||(15974272-15974433)
chr5 (69-247)||(18670903-18671079)
chr5 (28-133)||(6491167-6491272)
chr5 (31-245)||(35700932-35701145)
chr5 (67-245)||(35708785-35708962)
chr5 (81-216)||(2679912-2680046)
chr5 (27-130)||(39428928-39429030)
chr5 (59-133)||(9684805-9684879)
chr5 (67-141)||(29709498-29709572)
chr5 (69-174)||(43496895-43496998)
chr5 (27-131)||(6373123-6373226)
chr5 (67-130)||(19389850-19389912)
chr5 (189-246)||(13569260-13569316)
chr5 (90-179)||(21916348-21916437)
chr5 (23-124)||(27480160-27480261)
chr5 (209-248)||(1935237-1935276)
chr5 (31-141)||(1977927-1978036)
chr5 (27-133)||(3081324-3081429)
chr5 (27-133)||(3938123-3938228)
chr5 (67-141)||(9096294-9096368)
chr5 (27-133)||(29022602-29022706)
chr5 (27-88)||(1935099-1935160)
chr5 (203-248)||(9684606-9684651)
chr5 (203-248)||(10295707-10295752)
chr5 (102-197)||(39549961-39550058)
chr5 (23-127)||(2020970-2021073)
chr5 (23-111)||(17092902-17092990)
chr5 (209-249)||(25598583-25598623)
chr5 (23-127)||(41694966-41695070)
chr5 (209-248)||(38120010-38120049)
chr5 (27-118)||(39011830-39011921)
chr5 (207-241)||(5089046-5089080)
chr5 (67-133)||(12150566-12150631)
chr5 (67-133)||(12229495-12229561)
chr5 (28-133)||(19338567-19338673)
chr5 (209-247)||(32824533-32824571)
chr5 (80-133)||(5836871-5836924)
chr5 (212-245)||(6491086-6491119)
chr5 (211-244)||(9096195-9096228)
chr5 (23-56)||(9621929-9621962)
chr5 (71-128)||(13294010-13294066)
chr5 (211-248)||(17093126-17093163)
chr5 (104-141)||(22103492-22103529)
chr5 (204-248)||(6620461-6620505)
chr5 (23-131)||(27350995-27351102)
chr5 (23-127)||(38928690-38928794)
[»] chr7 (64 HSPs)
chr7 (23-247)||(38505332-38505545)
chr7 (27-241)||(15748941-15749154)
chr7 (27-245)||(16805559-16805776)
chr7 (26-242)||(2826238-2826452)
chr7 (23-248)||(30080841-30081065)
chr7 (67-245)||(4058171-4058348)
chr7 (59-238)||(43741586-43741762)
chr7 (59-245)||(42253832-42254015)
chr7 (23-245)||(46442581-46442802)
chr7 (67-242)||(45940432-45940606)
chr7 (27-242)||(32650383-32650586)
chr7 (76-241)||(19791563-19791730)
chr7 (68-241)||(34670072-34670244)
chr7 (23-248)||(43348227-43348440)
chr7 (68-141)||(33872144-33872217)
chr7 (69-141)||(17818281-17818353)
chr7 (67-248)||(6746601-6746778)
chr7 (29-146)||(42112953-42113069)
chr7 (102-245)||(10592017-10592159)
chr7 (27-141)||(17884187-17884297)
chr7 (27-133)||(13697265-13697371)
chr7 (31-141)||(23550763-23550873)
chr7 (71-216)||(38137841-38137986)
chr7 (27-133)||(33187839-33187943)
chr7 (69-248)||(35264906-35265083)
chr7 (27-146)||(23465992-23466108)
chr7 (27-247)||(1277802-1278027)
chr7 (27-132)||(31055359-31055464)
chr7 (23-164)||(42266995-42267134)
chr7 (23-127)||(43778563-43778668)
chr7 (105-248)||(3892662-3892805)
chr7 (78-141)||(4125924-4125985)
chr7 (77-197)||(23551578-23551696)
chr7 (30-141)||(32820227-32820336)
chr7 (203-250)||(33871773-33871820)
chr7 (23-125)||(23620781-23620883)
chr7 (75-133)||(24924620-24924677)
chr7 (207-249)||(30081234-30081276)
chr7 (29-146)||(38233730-38233846)
chr7 (74-135)||(44487356-44487417)
chr7 (81-133)||(9172490-9172542)
chr7 (74-146)||(20513282-20513354)
chr7 (23-133)||(21018685-21018792)
chr7 (23-127)||(28437530-28437634)
chr7 (73-133)||(30301962-30302021)
chr7 (203-247)||(34651869-34651913)
chr7 (67-133)||(4788034-4788099)
chr7 (203-245)||(7666982-7667024)
chr7 (67-133)||(14676205-14676270)
chr7 (203-245)||(28437359-28437401)
chr7 (67-133)||(31179999-31180063)
chr7 (203-245)||(33872221-33872263)
chr7 (203-245)||(43189078-43189120)
chr7 (75-141)||(43741322-43741388)
chr7 (34-133)||(425319-425420)
chr7 (67-160)||(41471405-41471497)
chr7 (73-230)||(46745625-46745780)
chr7 (209-249)||(7667338-7667378)
chr7 (85-133)||(9153080-9153128)
chr7 (216-252)||(16805378-16805414)
chr7 (209-241)||(33406414-33406446)
chr7 (209-245)||(38236019-38236055)
chr7 (209-245)||(41471377-41471413)
chr7 (203-247)||(42854118-42854162)
[»] chr3 (70 HSPs)
chr3 (23-242)||(3537083-3537299)
chr3 (27-216)||(33944632-33944819)
chr3 (60-247)||(25754127-25754311)
chr3 (27-248)||(517624-517841)
chr3 (18-239)||(27197131-27197350)
chr3 (27-248)||(29623105-29623325)
chr3 (60-245)||(48908899-48909082)
chr3 (68-248)||(50948074-50948254)
chr3 (68-216)||(53664632-53664779)
chr3 (23-245)||(49183564-49183778)
chr3 (23-216)||(5939769-5939961)
chr3 (67-216)||(38639490-38639638)
chr3 (76-216)||(37674181-37674320)
chr3 (27-245)||(35282961-35283176)
chr3 (60-216)||(44400609-44400765)
chr3 (59-197)||(33908973-33909110)
chr3 (23-246)||(32858700-32858923)
chr3 (27-139)||(51686484-51686595)
chr3 (27-133)||(53888470-53888576)
chr3 (27-179)||(45570935-45571087)
chr3 (17-141)||(1339881-1340004)
chr3 (68-248)||(50535135-50535314)
chr3 (23-241)||(15499287-15499503)
chr3 (150-247)||(51684494-51684590)
chr3 (68-248)||(41099760-41099938)
chr3 (67-245)||(1132957-1133135)
chr3 (23-250)||(47789434-47789660)
chr3 (76-161)||(40118925-40119010)
chr3 (20-197)||(49682987-49683163)
chr3 (27-135)||(31651437-31651545)
chr3 (23-123)||(41961965-41962065)
chr3 (20-251)||(30131871-30132100)
chr3 (77-179)||(22225304-22225405)
chr3 (23-197)||(24242080-24242254)
chr3 (67-133)||(24588315-24588381)
chr3 (59-133)||(33281730-33281804)
chr3 (203-248)||(3537427-3537472)
chr3 (20-133)||(21777621-21777734)
chr3 (17-133)||(19793445-19793561)
chr3 (23-141)||(47359294-47359402)
chr3 (31-197)||(3043114-3043280)
chr3 (203-249)||(39499419-39499465)
chr3 (203-249)||(47789260-47789306)
chr3 (27-133)||(48444490-48444594)
chr3 (165-247)||(53620159-53620240)
chr3 (76-137)||(7435656-7435716)
chr3 (76-133)||(11500087-11500144)
chr3 (60-133)||(27681791-27681864)
chr3 (18-127)||(45555622-45555731)
chr3 (60-125)||(52620850-52620915)
chr3 (67-139)||(35989094-35989165)
chr3 (214-250)||(36637668-36637704)
chr3 (23-127)||(44412143-44412246)
chr3 (209-248)||(2927730-2927769)
chr3 (27-86)||(19148197-19148256)
chr3 (75-142)||(43263697-43263764)
chr3 (27-133)||(36637783-36637889)
chr3 (209-247)||(38456485-38456523)
chr3 (203-245)||(44411972-44412014)
chr3 (23-244)||(47714661-47714885)
chr3 (67-133)||(49855840-49855906)
chr3 (203-245)||(49861057-49861099)
chr3 (204-246)||(55439807-55439849)
chr3 (153-250)||(16883166-16883262)
chr3 (216-249)||(36598120-36598153)
chr3 (203-248)||(39115126-39115171)
chr3 (73-133)||(3458324-3458383)
chr3 (27-87)||(27921991-27922050)
chr3 (203-247)||(52620651-52620695)
chr3 (204-244)||(55445131-55445171)
[»] chr8 (57 HSPs)
chr8 (67-245)||(79645-79823)
chr8 (27-245)||(21173850-21174066)
chr8 (59-246)||(23932582-23932767)
chr8 (67-247)||(26772674-26772852)
chr8 (23-235)||(43239552-43239762)
chr8 (27-241)||(12506188-12506396)
chr8 (23-216)||(34335942-34336123)
chr8 (23-197)||(39193850-39194024)
chr8 (67-247)||(41866149-41866327)
chr8 (27-245)||(1839812-1840028)
chr8 (69-246)||(8228405-8228580)
chr8 (68-248)||(14581781-14581959)
chr8 (27-133)||(40985066-40985172)
chr8 (25-139)||(13369902-13370016)
chr8 (23-248)||(34272383-34272608)
chr8 (28-146)||(4166636-4166753)
chr8 (27-141)||(13227685-13227799)
chr8 (23-141)||(43733108-43733227)
chr8 (67-197)||(44251590-44251720)
chr8 (27-133)||(27085332-27085437)
chr8 (17-99)||(31297330-31297412)
chr8 (69-146)||(43007688-43007765)
chr8 (23-99)||(13865080-13865156)
chr8 (124-240)||(36837563-36837677)
chr8 (75-146)||(4873299-4873370)
chr8 (78-144)||(1840241-1840307)
chr8 (27-146)||(9054503-9054624)
chr8 (31-127)||(25033369-25033465)
chr8 (74-133)||(11229262-11229321)
chr8 (23-133)||(10589787-10589897)
chr8 (23-197)||(36906106-36906280)
chr8 (71-133)||(41455240-41455301)
chr8 (203-248)||(1839635-1839680)
chr8 (28-133)||(44879530-44879634)
chr8 (28-133)||(44880287-44880391)
chr8 (23-99)||(1942041-1942117)
chr8 (68-132)||(10605180-10605244)
chr8 (77-133)||(22330674-22330729)
chr8 (69-141)||(29584169-29584241)
chr8 (23-127)||(36102878-36102982)
chr8 (208-251)||(3393881-3393924)
chr8 (209-251)||(34553302-34553345)
chr8 (203-249)||(1111293-1111339)
chr8 (209-247)||(1941866-1941904)
chr8 (27-133)||(8948609-8948714)
chr8 (214-248)||(21262753-21262787)
chr8 (67-133)||(28416193-28416258)
chr8 (67-105)||(36837520-36837558)
chr8 (203-245)||(36906410-36906452)
chr8 (203-244)||(79439-79480)
chr8 (23-123)||(7079982-7080079)
chr8 (203-248)||(13864907-13864952)
chr8 (80-133)||(16024598-16024651)
chr8 (21-53)||(1840197-1840229)
chr8 (23-127)||(2474755-2474858)
chr8 (73-133)||(28169860-28169920)
chr8 (209-245)||(34148398-34148434)
[»] scaffold0128 (1 HSPs)
scaffold0128 (27-247)||(26249-26469)
[»] scaffold0136 (1 HSPs)
scaffold0136 (27-245)||(2015-2231)
[»] scaffold0053 (1 HSPs)
scaffold0053 (27-197)||(29164-29333)
[»] scaffold0031 (1 HSPs)
scaffold0031 (27-146)||(93498-93617)
[»] scaffold0388 (1 HSPs)
scaffold0388 (23-242)||(6940-7164)
[»] scaffold0002 (1 HSPs)
scaffold0002 (67-214)||(90907-91053)
[»] scaffold0119 (2 HSPs)
scaffold0119 (27-244)||(36992-37210)
scaffold0119 (28-197)||(30374-30542)
[»] scaffold1163 (1 HSPs)
scaffold1163 (150-244)||(1931-2024)
[»] scaffold0263 (1 HSPs)
scaffold0263 (67-159)||(12281-12373)
[»] scaffold0274 (1 HSPs)
scaffold0274 (50-171)||(15863-15983)
[»] scaffold0598 (1 HSPs)
scaffold0598 (27-99)||(9397-9469)
[»] scaffold0024 (1 HSPs)
scaffold0024 (102-174)||(44986-45056)
[»] scaffold0519 (1 HSPs)
scaffold0519 (74-133)||(7498-7557)
[»] scaffold0036 (1 HSPs)
scaffold0036 (75-246)||(82666-82837)
[»] scaffold0026 (1 HSPs)
scaffold0026 (62-129)||(74717-74784)
[»] scaffold0717 (2 HSPs)
scaffold0717 (203-249)||(1800-1846)
scaffold0717 (23-127)||(1568-1671)
[»] scaffold0179 (1 HSPs)
scaffold0179 (20-53)||(906-939)
[»] scaffold0028 (2 HSPs)
scaffold0028 (203-248)||(35270-35315)
scaffold0028 (23-99)||(35443-35519)
[»] scaffold0006 (1 HSPs)
scaffold0006 (206-248)||(59669-59711)
[»] scaffold1562 (1 HSPs)
scaffold1562 (203-248)||(361-406)
[»] scaffold1158 (1 HSPs)
scaffold1158 (203-248)||(2187-2232)


Alignment Details
Target: scaffold0051 (Bit Score: 369; Significance: 0; HSPs: 5)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 20 - 452
Target Start/End: Original strand, 6742 - 7174
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6742 aagatagattaaatttgaagaattcatattaacccttcgaaaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttg 6841  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctccctt 219  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  6842 tattatgaagaaaagttaaccttccaattccctcccctcccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctccctt 6941  T
Q  220 cccatccaaactcgcaaacaaagcctaaggaatcttctaaatgaatgaaagatcaaattgacatcaaaatatcgttccaagagtcgctcttgaacatggt 319  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  6942 cccctccaaactcgcaaacaaagcctaatgaatcttctaaatgaatgaaatatcaaattgacatcaaaatcttgttccaagagttgctcttgaacatggt 7041  T
Q  320 ctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatatca 419  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7042 ctctttttgaatcatttttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatatca 7141  T
Q  420 ttaatagctctagtaggaaatttccatgtacct 452  Q
    |||||||||||||||||||||||||||||||||    
T  7142 ttaatagctctagtaggaaatttccatgtacct 7174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 20 - 452
Target Start/End: Original strand, 676 - 1109
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  676 aagatagattaaatttgaagaattcatattaacccttcgaaaccccacaaaaccatcctccaagacaatgttttagttcct-caaatgaggagggttttg 774  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctc--cc 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||  ||    
T  775 tattatgaagaaaagttaaccctccaattccctcccctcccattttcctctattttttctgcttgctcgttcctttttttctcaagccttcccctctccc 874  T
Q  218 ttcccatccaaactcgcaaacaaagcctaaggaatcttctaaatgaatgaaagatcaaattgacatcaaaatatcgttccaagagtcgctcttgaacatg 317  Q
    || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  875 tttcccttcaaactcgcaatcaaagcctaaggaatcttctaaatgaatgaaagatcaaattgagatcaaaatctcgttccaagagtcgctcttgaacatg 974  T
Q  318 gtctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  975 gtctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatat 1074  T
Q  418 cattaatagctctagtaggaaatttccatgtacct 452  Q
    |||||||||||||||||||||||||||||||||||    
T  1075 cattaatagctctagtaggaaatttccatgtacct 1109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 364; E-Value: 0
Query Start/End: Original strand, 20 - 452
Target Start/End: Original strand, 3553 - 3986
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  3553 aagatagattaaatttgaagaattcatattaacccttcgaaaccccacaaaaccatcctccaagacaatgttttagttcct-caaatgaggagggttttg 3651  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctc--cc 217  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||  ||    
T  3652 tattatgaagaaaagttaaccctccaattccctcccctcccattttcctctattttttctgcttgctcgttcctttttttctcaagccttcccctctccc 3751  T
Q  218 ttcccatccaaactcgcaaacaaagcctaaggaatcttctaaatgaatgaaagatcaaattgacatcaaaatatcgttccaagagtcgctcttgaacatg 317  Q
    || || | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  3752 tttcccttcaaactcgcaatcaaagcctaaggaatcttctaaatgaatgaaagatcaaattgagatcaaaatctcgttccaagagtcgctcttgaacatg 3851  T
Q  318 gtctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatat 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3852 gtctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatat 3951  T
Q  418 cattaatagctctagtaggaaatttccatgtacct 452  Q
    |||||||||||||||||||||||||||||||||||    
T  3952 cattaatagctctagtaggaaatttccatgtacct 3986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 20 - 452
Target Start/End: Original strand, 7725 - 8157
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7725 aagatagattaaatttgaagaattcatattaacccttcgaaaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttg 7824  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctccctt 219  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  7825 tattatgaagaaaagttaaccttccaattccctcccctcccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctccctt 7924  T
Q  220 cccatccaaactcgcaaacaaagcctaaggaatcttctaaatgaatgaaagatcaaattgacatcaaaatatcgttccaagagtcgctcttgaacatggt 319  Q
    ||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||    
T  7925 cccctccaaactcgcaaacaaagcctaatgaatcttctaaatgaatgaaatatcaaattgacatcaaaatcttgttccaagagttgctcttgaacatggt 8024  T
Q  320 ctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataattttttacaatatca 419  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8025 ctctttttgaatcatatttatgattcaagaccataaacttttgaggcaatagatcaagcaacaacatttaaatatatgagaataaatttttgcaatatca 8124  T
Q  420 ttaatagctctagtaggaaatttccatgtacct 452  Q
    || |||||||||||||||||||||||| |||||    
T  8125 ttcatagctctagtaggaaatttccatatacct 8157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #5
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 180 - 452
Target Start/End: Original strand, 8501 - 8775
Alignment:
Q  180 gcttggtcgttcctttttatctcaagccttcccctc--ccttcccatccaaactcgcaaacaaagcctaaggaatcttctaaatgaatgaaagatcaaat 277  Q
    ||||| |||||||||||| |||||||||||||||||  |||| || | ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  8501 gcttgctcgttcctttttttctcaagccttcccctctccctttcccttcaaactcgcaatcaaagcctaaggaatcttctaaatgaatgaaatatcaaat 8600  T
Q  278 tgacatcaaaatatcgttccaagagtcgctcttgaacatggtctctttttgaatcatctttatgattcaagaccataaacttttgaggcaatagatcaag 377  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8601 tgacatcaaaatcttgttccaagagttgctcttgaacatggtctctttttgaatcatttttatgattcaagaccataaacttttgaggcaatagatcaag 8700  T
Q  378 caacaacatttaaatatatgagaataattttttacaatatcattaatagctctagtaggaaatttccatgtacct 452  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8701 caacaacatttaaatatatgagaataattttttacaatatcattaatagctctagtaggaaatttacatgtacct 8775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 9e-68; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 27 - 249
Target Start/End: Complemental strand, 11515133 - 11514912
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  11515133 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 11515034  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||    |||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  |||||||||||||||||||| |||    
T  11515033 aagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcccttcccctcc 11514935  T
Q  227 aaactcgcaaacaaagcctaagg 249  Q
    |||||||||||||||||||||||    
T  11514934 aaactcgcaaacaaagcctaagg 11514912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 13018466 - 13018687
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||| |||||||| | | ||||||| ||||||||||| |||||||| | ||||||||||| |||||||||||||||||||||    
T  13018466 atagattaaatttgaaaaattcttattaaccctccaaaaccccccaaaaccctcccccaatacatttttttagttcctccaaatgaggagggttttgtat 13018565  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||| | ||||   ||||| |||||||||||||| |||| |||| |||  || ||||||||| ||||||||||||||||||||||||    
T  13018566 tatgaagaaaagttaactccccaaagccctcctctcccattttcctccatttcttccacttactcattccttttt-tctcaagccttcccctcccttccc 13018664  T
Q  223 atccaaactcgcaaacaaagcct 245  Q
     ||||||||||||||||||||||    
T  13018665 ttccaaactcgcaaacaaagcct 13018687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 241
Target Start/End: Complemental strand, 37194356 - 37194142
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||||||  ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37194356 attaaatttgaagaattcttattaaccctccaaaacccccaaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 37194257  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||  || |||||||||||||||| |||| |||  |  ||||||||| ||||||| |||||||||||||||| |||    
T  37194256 aagaaaagttaaccccccaaagccctcgtcttccattttcctctatttcttccacttacttattcctttttttctcaagtcttcccctcccttcccctcc 37194157  T
Q  227 aaactcgcaaacaaa 241  Q
    |||||||||||||||    
T  37194156 aaactcgcaaacaaa 37194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 26905897 - 26905673
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  26905897 atagattaaatttgaaaaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtat 26905798  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
     ||||||||||||||||||  |||  |||||| ||||||||||||| ||||| |||| |||| || || |||||| || ||| ||||||||||  ||| |    
T  26905797 catgaagaaaagttaacccctcaaaatcctcctctcccattttcctttatttcttccacttgctcatt-ctttttttcccaaaccttcccctcatttctc 26905699  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     ||||||||| ||||||||| |||||    
T  26905698 ctccaaactcacaaacaaagtctaag 26905673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 60 - 247
Target Start/End: Complemental strand, 6656176 - 6655988
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaat--gttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccct 157  Q
    |||||| ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| ||    
T  6656176 aaccccccaaaaccctcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctct 6656077  T
Q  158 cccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||||||| ||||||| |||| |||| || ||||||||| ||   ||||||||||||||||||| |||||||||||| |||||||||||    
T  6656076 cccattttcttctatttcttccacttgctcattccttttt-tccttagccttcccctcccttcccctccaaactcgcagacaaagcctaa 6655988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 246
Target Start/End: Original strand, 43572536 - 43572758
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  43572536 attaaatttgaagaattcttattaaccctccaaaaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 43572635  T
Q  127 aagaaaagttaaccctccaa----tttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||| | ||    |   |||| |||||| |||||||||||| |||| |||     ||||||||| || |||||||||||||||||||||    
T  43572636 aagaaaagttaacccccaaagccctcctctcctctcccactttcctctatttcttccacttacctattccttttt-tcccaagccttcccctcccttccc 43572734  T
Q  223 atccaaactcgcaaacaaagccta 246  Q
     |||||||||||||||||||||||    
T  43572735 ctccaaactcgcaaacaaagccta 43572758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 40212092 - 40211874
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||| ||||||| |||||||| | | ||||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  40212092 attaaatttgtagaattcttattaaccctccaaaaccccccaaaaccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatg 40211993  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    |||||||  ||||| ||| |   ||||| ||||||||||||||||||| |||| |||  |  ||||||||| |||||| ||||||| ||||||| | |||    
T  40211992 aagaaaatataaccatccga-gccctcctctcccattttcctctatttcttccacttaattattccttttt-tctcaaaccttcccatcccttctcctcc 40211895  T
Q  227 aaactcgcaaacaaagcctaa 247  Q
    |||||| ||||||||||||||    
T  40211894 aaactcacaaacaaagcctaa 40211874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 26 - 248
Target Start/End: Complemental strand, 34757696 - 34757474
Alignment:
Q  26 gattaaatttgaagaattcatattaacctttc-gaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||| |||||||||||||||||| | || | |  ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  34757696 gattgaatttgaagaattcatataagccctccaaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtatta 34757597  T
Q  125 tgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccat 224  Q
    |||||||| |||||||| ||||   ||||| |||||||||| |||||||| || | | || || ||||||||| || ||| ||||||||||||||||| |    
T  34757596 tgaagaaaggttaaccccccaaagccctcctctcccatttttctctatttctttcacctgctcattccttttt-tcccaaaccttcccctcccttcccct 34757498  T
Q  225 ccaaactcgcaaacaaagcctaag 248  Q
    ||||| ||||||||| | ||||||    
T  34757497 ccaaattcgcaaacataacctaag 34757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 69 - 248
Target Start/End: Complemental strand, 4003475 - 4003297
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||||||||||||| ||| ||||||  ||||||||||| |||||||||||||||||||| ||||||| ||||   |||||||||||||||||||    
T  4003475 aaaccctcctccaatacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaagccctcccctcccattttcct 4003376  T
Q  169 ctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||| |||| |||| || ||||||||| ||  ||||| |||||||||||||  ||||||||| |||||||||||||||    
T  4003375 ctatttcttccacttgctcattccttttt-tccaaagccctcccctcccttccactccaaactcacaaacaaagcctaag 4003297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 31082872 - 31082690
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||||||||||||| ||||||||||  |||| ||||||||||| |||||| |||||||||||||||| ||||   |||||||||    
T  31082872 aaaccccccaaaaccctcctccaatacaatattttagttcccccaaacgaggagggtttagtattacgaagaaaagttaaccc-ccaaagccctcccctc 31082774  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||||| |||| |||| || ||||||||| || ||||| |||||||||||| |  ||||||||||||||||||||||    
T  31082773 ccattttcctctatttcttccacttgctcattccttttt-tcccaagcgttcccctccctttc--tccaaactcgcaaacaaagcct 31082690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 1364889 - 1364734
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| ||||    
T  1364889 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcc 1364790  T
Q  160 cattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||| ||||||| |||| |||| || ||||||||| ||  ||||||||||||||    
T  1364789 cattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcc 1364734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 21626218 - 21625996
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccc--cacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgt 120  Q
    |||||||||||||||||||||| |||||||| | | ||||||  ||||||||||| |||||||||||  ||||||||||  |||||||||| ||||||||    
T  21626218 atagattaaatttgaagaattcttattaaccctccaaaaccctccacaaaacccttctccaatacaactttttagttcccccaaatgaggatggttttgt 21626119  T
Q  121 attatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttc 220  Q
    ||||||||||||||||||||| ||||    || || | |||||||||||||||| |||  |||| || ||||||||| || |||  |||||||||| |||    
T  21626118 attatgaagaaaagttaaccccccaaagcact-cctttccattttcctctatttcttctacttgctcattcctttttttc-caaatcttcccctccattc 21626021  T
Q  221 ccatccaaactcgcaaacaaagcct 245  Q
    || |||||| |||||||||||||||    
T  21626020 ccctccaaattcgcaaacaaagcct 21625996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 68 - 241
Target Start/End: Original strand, 15555378 - 15555550
Alignment:
Q  68 aaaaccctc-ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||| |||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||   ||||| |||||||||||    
T  15555378 aaaaccctcactccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaattaaccc-ccaaagccctcctctcccattttc 15555476  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaa 241  Q
     ||||||| |||| |||| || ||||||||| ||  ||| ||||||||||||| || ||||||||||||||||||    
T  15555477 ttctatttcttccacttgctcattccttttt-tcctaagtcttcccctccctttccctccaaactcgcaaacaaa 15555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 24 - 242
Target Start/End: Original strand, 35550147 - 35550361
Alignment:
Q  24 tagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    ||||||||||||||||||||||||| |||| | | ||| |||||||||| || ||||| |||||  ||||||||||  |||||||||||||||| |||||    
T  35550147 tagattaaatttgaagaattcatataaaccctccaaaatcccacaaaactctactccagtacaactttttagttcc-ccaaatgaggagggtttagtatt 35550245  T
Q  124 atgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccca 223  Q
    |||||||| ||||||||| ||||   ||||| || |||||||||||||||| |||| |||  |  || |||||| ||||||| |||||| | |||||||     
T  35550246 atgaagaacagttaaccc-ccaa-gccctccacttccattttcctctatttcttccacttatttatt-ctttttttctcaagacttcccattccttcccc 35550342  T
Q  224 tccaaactcgcaaacaaag 242  Q
    |||||||||||||||||||    
T  35550343 tccaaactcgcaaacaaag 35550361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 245
Target Start/End: Original strand, 16519083 - 16519297
Alignment:
Q  29 taaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaa 128  Q
    ||||||||| |||||||||| |||| |   ||||||| ||| ||||||||| |||||||  |||||||| |  |||||||||||| ||||||||||||||    
T  16519083 taaatttgatgaattcatataaaccctcaaaaaccccccaataccctcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaa 16519182  T
Q  129 gaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaa 228  Q
    ||||| | ||||| ||||   |||||||| ||| | | |||||||| |||| |||| || ||||||||| ||  || || ||||||| |||||| |||||    
T  16519183 gaaaaatcaacccaccaaagccctcccct-ccaatgtactctatttcttccacttgctccttccttttt-tccaaaaccctcccctctcttcccctccaa 16519280  T
Q  229 actcgcaaacaaagcct 245  Q
    |||||||||||||||||    
T  16519281 actcgcaaacaaagcct 16519297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 67 - 193
Target Start/End: Complemental strand, 30523295 - 30523170
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||| |||||||||||||||| ||||||||||  ||||| || ||| ||||||||||||||||||| ||||||| ||||  ||||||| ||||||| ||    
T  30523295 caaaatcctcctccaatacaattttttagttccc-caaattagaaggattttgtattatgaagaaaatttaacccaccaaaatcctcccttcccattgtc 30523197  T
Q  167 ctctattttttccgcttggtcgttcct 193  Q
    |||||||| |||| |||| ||||||||    
T  30523196 ctctatttgttccacttgctcgttcct 30523170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 39205110 - 39204960
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagtt-cctacaaatgaggagggttttgta 121  Q
    ||||||||||||| |||||||||||| |||| | | ||| |||  |||| |||||||||||||||| |||||||| ||  |||||||||||||||| |||    
T  39205110 atagattaaatttcaagaattcatataaaccctccaaaaacccctaaaatcctcctccaatacaattttttagttccccccaaatgaggagggtttagta 39205011  T
Q  122 ttatgaagaaaagttaaccctccaatttcctcccctcccattttcctctat 172  Q
    ||||| | |||||||||||| ||||   |||||||| | ||||||||||||    
T  39205010 ttatggaaaaaagttaacccgccaaagccctccccttctattttcctctat 39204960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 83 - 245
Target Start/End: Complemental strand, 39750184 - 39750030
Alignment:
Q  83 tacaatgttttagttcctacaaatgaggagggttttgtattat-gaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgc 181  Q
    |||||| ||||||||||  ||||||||||||||||||| |||| |||||||||||||||| ||||   ||||||||||||||||||||      |||| |    
T  39750184 tacaattttttagttccc-caaatgaggagggttttgtgttattgaagaaaagttaaccc-ccaaagccctcccctcccattttcctc------ttccac 39750093  T
Q  182 ttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||| || ||||||||| || ||||||||||||| ||||||| |||||||||||||| |||||||    
T  39750092 ttgctcattccttttt-tcccaagccttccccttccttcccctccaaactcgcaaagaaagcct 39750030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 179
Target Start/End: Original strand, 43190573 - 43190682
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||| ||||||||| ||| | ||||| ||||||| ||| ||||||||||||||||||||||||||||  |||   |||||||||||||||||||    
T  43190573 aaaccctccttcaatacaatttttgatttcctccaaatgatgagagttttgtattatgaagaaaagttaacccctcaaac-cctcccctcccattttcct 43190671  T
Q  169 ctattttttcc 179  Q
    |||||| ||||    
T  43190672 ctatttcttcc 43190682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 11522172 - 11522267
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    |||||||||||||||||||||| |||| | | ||||||| |||||||||||||||||||||  ||||||||||  ||||||||||||||||| ||||    
T  11522172 attaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaatacaactttttagttcc-ccaaatgaggagggttttatatt 11522267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 28539414 - 28539557
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||||||||||||| |||| | | ||| ||| |||| | ||| ||||||||||| |||||| |||  ||||||||||| |||| | ||    
T  28539414 atagattaaatttgaagaattcatataaaccctccaaaatcccccaaagctctcatccaatacaattttttag-tcccccaaatgaggagagtttagcat 28539512  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    ||||||||||||||||| | |||    ||||||||||||||||||    
T  28539513 tatgaagaaaagttaactccccagagccctcccctcccattttcc 28539557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 243
Target Start/End: Original strand, 16625856 - 16625988
Alignment:
Q  110 gagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagcctt 209  Q
    ||||||||||||| |||||||||| ||||||| ||||   |||||||||||| | | |||||||| |||| |||| ||  |||||||| ||  || || |    
T  16625856 gagggttttgtatcatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccacttgctccatccttttt-tccaaaaccct 16625954  T
Q  210 cccctcccttcccatccaaactcgcaaacaaagc 243  Q
    ||||||||||||| ||||||||||||||||||||    
T  16625955 cccctcccttcccctccaaactcgcaaacaaagc 16625988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 26599241 - 26599393
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||| |||| | |||| | | ||||| | |||||||||||||||||||||| | | ||||||  |||||||||||||  ||||||||||    
T  26599241 attaaatttgaagaactcatgtaaaccctccaaaacctcccaaaaccctcctccaatacaatttgtgagttcccccaaatgaggagggaattgtattatg 26599340  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    ||||||| | ||||| ||||   ||| |||||||| |   |||||||||||||    
T  26599341 aagaaaaatgaaccccccaaagcccttccctcccaatgctctctattttttcc 26599393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 41100137 - 41100243
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga-agaaaagttaaccctccaatttcctcccctcccatttt 165  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||||||| |||||||||||||| | ||   ||||||||| ||||||    
T  41100137 caaaatcctcctccaatacaattttttagttccc-caaatgaggagggttttgtattatgatagaaaagttaaccc-ctaaaaccctcccctcacatttt 41100234  T
Q  166 cctctattt 174  Q
    | |||||||    
T  41100235 catctattt 41100243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 30072463 - 30072570
Alignment:
Q  90 ttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgt 189  Q
    ||||||||||  |||||||||| | | | |||||||||||||||||||||||  |||   ||||||||||||||||||||||||| |||| |||| || |    
T  30072463 ttttagttccctcaaatgaggatgatatagtattatgaagaaaagttaacccctcaaagccctcccctcccattttcctctatttcttccacttgctcat 30072562  T
Q  190 tccttttt 197  Q
    ||||||||    
T  30072563 tccttttt 30072570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 9087457 - 9087562
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||  | | ||||||| ||||| |||||||| ||||||| ||| ||||||  ||||||||||||||||| |||| ||    
T  9087457 attaaatttgaagaattcatataaactctcccaaaccccccaaaatcctcctccgatacaatttttcagttcc-ccaaatgaggagggttttatattttg 9087555  T
Q  127 aagaaaa 133  Q
    |||||||    
T  9087556 aagaaaa 9087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 4042057 - 4041953
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||| ||||||||| || |||| |||    
T  4042057 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttccttcaaatgagggggattttttat 4041958  T
Q  123 tatga 127  Q
    |||||    
T  4041957 tatga 4041953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 240
Target Start/End: Complemental strand, 21835030 - 21834815
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||  ||||||||| |||| | | ||||  | ||||||||||||| |||||||  ||||||||||   |||||||||| ||||| |||||||    
T  21835030 attaaatttgattaattcatataaaccctccaaaactgcccaaaaccctcctctaatacaactttttagttcccctaaatgaggagagttttatattatg 21834931  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcc--tttttatctcaagccttcccctcccttcccat 224  Q
    ||||||| |||| |||||||   ||| || ||||  | |||||| ||| |||| |||| || ||||  ||||| | | || || |||| ||||||||| |    
T  21834930 aagaaaaattaatcctccaaagcccttccgtcccgatgtcctctgtttcttccacttgctccttccttttttttttttaaaccctcccttcccttcccct 21834831  T
Q  225 ccaaactcgcaaacaa 240  Q
     |||||||||||||||    
T  21834830 tcaaactcgcaaacaa 21834815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 36870310 - 36870246
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| |||||||||    
T  36870310 aaaccctcctccaatacaattttttagttcccccaaatgaggagggttttctattttgaagaaaa 36870246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 726045 - 725939
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||||||| ||||||| |  ||||| ||||||||||| |||||| ||| ||| ||||||| |||||||||  | |||| |||||||    
T  726045 attaaatttgaaaaattcatataaaccttttgttaccccccaaaaccctcccccaataaaatttttgagttcctccaaatgagggagattttttattatg 725946  T
Q  127 aagaaaa 133  Q
    || ||||    
T  725945 aataaaa 725939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 244
Target Start/End: Original strand, 1270695 - 1270911
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaa-tgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||||||||| |||| | | ||| | | |||||||||| | |||||||| | ||||||||||  |||||||||| ||||| | ||||||    
T  1270695 ttaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttcc-ccaaatgagga-ggtttagcattatg 1270792  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct-caagccttcccctcccttcccatc 225  Q
    || | |||||||||| ||||   ||||  || ||||||||||| |||| |||| |||| || ||| ||||| | | |||| ||| |  | ||||||| ||    
T  1270793 aatataagttaaccccccaaaaccctcttcttccattttcctcgatttcttccacttgctcattcatttttttttccaagtctttcatttccttcccttc 1270892  T
Q  226 caaactcgcaaacaaagcc 244  Q
    |||||||||||||||||||    
T  1270893 caaactcgcaaacaaagcc 1270911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 9087690 - 9087795
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||||||| |||  | | ||||||| ||||||| |||||| ||||||| ||||||||||  ||||||||||||||||| |||| ||    
T  9087690 attaaatttgaataattcatataaactctcccaaaccccccaaaaccatcctccgatacaat-ttttagttccctcaaatgaggagggttttatattttg 9087788  T
Q  127 aagaaaa 133  Q
    || ||||    
T  9087789 aaaaaaa 9087795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 15803237 - 15803065
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||| |||||||||||||||| ||||||||||  ||| ||||||||||||| |||| ||||||||| | | ||||||||   || | ||| ||| | ||    
T  15803237 caaaatcctcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaaataagccctccaa-agcccctccttccaatgtc 15803139  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    ||| |||| |||| |||| || |||||||||    |||||||| || ||||||||  |||||||| |||||||||||    
T  15803138 ctccatttcttccacttgctccttccttttt---ccaagcctttccttcccttcctctccaaacttgcaaacaaagc 15803065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 16813683 - 16813504
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||| ||||||||||||||| ||||||||  | ||||| ||||| |||| |||||||||||||||||||||| | |||     |  ||||  ||||||    
T  16813683 caaaactctcctccaatacaattttttagttttt-caaataaggagagtttagtattatgaagaaaagttaaccat-caaagcattttcctctgattttc 16813586  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||| |||||||||  ||  ||||| |||||| ||  |  ||||| ||||||||||| ||||||||||||||||||||||||||    
T  16813585 ctcaattttttccatttactcgtt-ctttttttcctagaccttctcctcccttcccctccaaactcgcaaacaaagcctaagg 16813504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 249
Target Start/End: Complemental strand, 16852962 - 16852783
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||| ||||||||||||||| ||||||||  | ||||| ||||| |||| |||||||||||||||||||||| | |||     |  ||||  ||||||    
T  16852962 caaaactctcctccaatacaattttttagttttt-caaataaggagagtttagtattatgaagaaaagttaaccat-caaagcattttcctctgattttc 16852865  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||| |||||||||  ||  ||||| |||||| ||  |  ||||| ||||||||||| ||||||||||||||||||||||||||    
T  16852864 ctcaattttttccatttactcgtt-ctttttttcctagaccttctcctcccttcccctccaaactcgcaaacaaagcctaagg 16852783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 31584758 - 31584863
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||| ||||||| |||| |   ||||||| ||||| |||||| ||||| ||| ||||||||||  ||||||||||||||||| |||| ||    
T  31584758 attaaatttgaagacttcatataaaccctctcaaaccccccaaaatcctccttcaatataattttttagttcc-ccaaatgaggagggttttatattttg 31584856  T
Q  127 aagaaaa 133  Q
    |||||||    
T  31584857 aagaaaa 31584863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 18590093 - 18589983
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct 201  Q
    |||| |||||| |||| ||||||||||||| ||||||| | ||||   ||||||||||||||||||||||||| ||||  ||| || ||||| ||| ||     
T  18590093 caaaagaggagagtttagtattatgaagaacagttaacaccccaaaaccctcccctcccattttcctctatttcttccatttgctcattcctgtttttc- 18589995  T
Q  202 caagccttcccc 213  Q
    ||||||||||||    
T  18589994 caagccttcccc 18589983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 214
Target Start/End: Original strand, 36642365 - 36642530
Alignment:
Q  45 atattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctcc 144  Q
    |||| |||||| | ||||||| ||||| ||||||||||   | | ||||||||||  |||||||||||| |||||||| |||||||||||||||||  ||    
T  36642365 atataaaccttccaaaacccctcaaaatcctcctccaa---atttttttagttccctcaaatgaggaggattttgtataatgaagaaaagttaacctccc 36642461  T
Q  145 aatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccct 214  Q
    ||   |||   |||||||||| || ||||| |||  |||| || ||||||||| || |||||||||||||    
T  36642462 aaagcccttatctcccatttttctttatttcttcaacttgttcattcctttttttc-caagccttcccct 36642530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 5322151 - 5322280
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||  ||||||||| | ||| ||||||  |||||||||||| ||||||||||||||||||| | ||||| ||||    ||||||||||| | ||    
T  5322151 caaaacccttttccaatacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatgaaccc-ccaaagctctcccctcccaatgtc 5322249  T
Q  167 ctctattttttccgcttggtcgttccttttt 197  Q
    |||||| |||||| || | || |||||||||    
T  5322250 ctctatcttttccactagctctttccttttt 5322280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 8555764 - 8555865
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| |    |||||| ||||||||||| |||||||||| ||||||||||  ||||||||| || |||| |||    
T  8555764 atagattgaatttgaaaaattcatataaaccctctataaccccccaaaaccctcccccaatacaattttttagttcccccaaatgagggggattttttat 8555863  T
Q  123 ta 124  Q
    ||    
T  8555864 ta 8555865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 30312429 - 30312497
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    ||||||| |||||||||||| ||||||||| ||||||||||  ||||||||| || |||| ||||||||    
T  30312429 aaaccccccaaaaccctccttcaatacaattttttagttcccccaaatgagggggattttttattatga 30312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 32243567 - 32243464
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| |||| |||| |||| |||  |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||| | |||| |||    
T  32243567 atagattgaatttgaaaaattgatataaacccttcataacccc-caaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttat 32243469  T
Q  123 tatga 127  Q
    |||||    
T  32243468 tatga 32243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 12941790 - 12941896
Alignment:
Q  27 attaaatttgaagaattcatattaac-ctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    |||||||||||||||||||||| ||| ||||| |||| |  |||||| ||||||||||| ||| || |||||||  |||||||| ||| |||| |||| |    
T  12941790 attaaatttgaagaattcatataaactctttc-aaactctccaaaactctcctccaatataattttctagttcccccaaatgagaaggattttatatttt 12941888  T
Q  126 gaagaaaa 133  Q
    ||||||||    
T  12941889 gaagaaaa 12941896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 44954037 - 44954094
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||| ||||||||| || |||||||||||||||| |||| |||||||||    
T  44954037 tcctccaatacaattttttagttctta-aaatgaggagggttttatattttgaagaaaa 44954094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 30072095 - 30072159
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||||||||||||| |||||||||   |||||||||||| |||| |||| |||||||||    
T  30072095 aaaaccctcctccaatacaat-ttttagttctcccaaatgaggaggattttatattttgaagaaaa 30072159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 44137228 - 44137151
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcct 100  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| |||||||    
T  44137228 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcct 44137151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 10165506 - 10165421
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgagg 110  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||||  ||||||||| |||||||||| ||||||||||  |||||||||    
T  10165506 atagattgaatttgaaaaattcatataaaccctccataacccca--aaaccctcccccaatacaattttttagttcccccaaatgagg 10165421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 13765927 - 13766003
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||    
T  13765927 atagattgaatttgaaaaattcatataaaccctccacaaccccccaaaaccctcccccaatacaatttttgagttcc 13766003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 32761441 - 32761489
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaaggaa 251  Q
    ||||| |||||||||||||| ||||||||||||| |||||||| |||||    
T  32761441 aagccctcccctcccttcccctccaaactcgcaatcaaagccttaggaa 32761489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 39819936 - 39819881
Alignment:
Q  77 ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||| ||||||||||  |||||||||||| |||||||||| ||||||||    
T  39819936 ctccaatacaattttttagttccc-caaatgaggaggattttgtattaggaagaaaa 39819881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 18826222 - 18826301
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgagg 110  Q
    |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||    
T  18826222 aatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagg 18826301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 22101687 - 22101592
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||||||||||||||||||||| ||||||   |||| ||  ||||||||| |||||||  || ||||||| ||  ||||||||||| ||||| |||||    
T  22101687 attaaatttgaagaattcatataaaccttctcaaactccctaaaaccctcatccaatatcattttttagtccc--caaatgaggagagttttatatta 22101592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 37201788 - 37201826
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  37201788 tcccctcccttcccctccaaattcgcaaacaaagcctaa 37201826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 18781640 - 18781685
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||| ||||||    
T  18781640 aagccctcccctcccttcccctccaaactctcaaacaaaacctaag 18781685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 36567138 - 36567093
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| || ||||||||||||    
T  36567138 aagccctcccctcccttcccctccaaactcacagacaaagcctaag 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 41656711 - 41656748
Alignment:
Q  104 aatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  41656711 aatgaggagagttttgtattatgaagaaaaattaaccc 41656748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 42644697 - 42644640
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||||| ||||||||||  ||||| ||| ||  ||||||||||||||||||    
T  42644697 cctccaatacaattttttagttcccccaaattagggggaatttgtattatgaagaaaa 42644640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 44137298 - 44137343
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||| ||||||||| ||||||||| |||||||||||||||    
T  44137298 aagccctcccttcccttcccctccaaactcccaaacaaagcctaag 44137343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 1365044 - 1365088
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||||| || | ||||||| ||||||||||||||||||||||||    
T  1365044 aagcctttcctttccttcccctccaaactcgcaaacaaagcctaa 1365088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 1726002 - 1725899
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| |    |||||| ||||||||||| |||||||||| ||| ||||||  || |||||| || |||| |||    
T  1726002 atagattgaatttgaaaaattcatataaaccctctataacccc-caaaaccctcccccaatacaatttttgagttcccccagatgagggggattttttat 1725904  T
Q  123 tatga 127  Q
    |||||    
T  1725903 tatga 1725899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 3737272 - 3737331
Alignment:
Q  81 aatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||||||| ||| ||||| | |||||||||| | ||||||||||||||||||| |||||||    
T  3737272 aatacaatttttgagttctt-caaatgaggatgattttgtattatgaagaaaaattaaccc 3737331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 14008183 - 14008147
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  14008183 tcccctcccttcccctccaaactcccaaacaaagcct 14008147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 247
Target Start/End: Complemental strand, 18826083 - 18826047
Alignment:
Q  211 ccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  18826083 ccctcccttcccctccaaactcccaaacaaagcctaa 18826047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 25960598 - 25960702
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  || ||| ||||||||||| || ||||||| ||| ||||||  |||||||||  | |||| |||    
T  25960598 atagattgaatttgaaaaattcatataaaccctccataagccctcaaaaccctcccccgatacaatttttgagttcccccaaatgagggagattttctat 25960697  T
Q  123 tatga 127  Q
    |||||    
T  25960698 tatga 25960702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 26599099 - 26599067
Alignment:
Q  219 tcccatccaaactcgcaaacaaagcctaaggaa 251  Q
    |||||||||||||| ||||||||||||||||||    
T  26599099 tcccatccaaactcccaaacaaagcctaaggaa 26599067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 36030856 - 36030796
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| |||||| ||| ||||||  |||||||||||  ||||||||| |||||||||    
T  36030856 cctcctccattacaatttttgagttcccccaaatgaggagaattttgtattctgaagaaaa 36030796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 43334900 - 43334824
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||||| |||||||| ||||||||| |||| | |  |||| | ||||||||||| |||||||||| ||| ||||||    
T  43334900 atagattgaatttgaaaaattcatataaaccctccataacctctcaaaaccctcccccaatacaatttttgagttcc 43334824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 8e-65; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 33590311 - 33590537
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||||||||||||||||||||||||||||||| | | ||||||| |||||||||| ||||||||||| |||||| |||  |||||||||||||||    
T  33590311 aataacatagattaaatttgaagaattcatattaaccctccaaaacccc-caaaaccctcatccaatacaattttttagctccc-caaatgaggagggtt 33590408  T
Q  117 ttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||| | |||| || ||||||| | |||||| |||||| ||||    
T  33590409 ttgtattatgaagaaaagttaaccccccaaaatcctcccctcccattttcctctatttttttcacttgctcattcctttct-tctcaaaccttccactcc 33590507  T
Q  217 cttcccatccaaactcgcaaacaaagccta 246  Q
     ||||| |||||||||||||||||||||||    
T  33590508 attcccctccaaactcgcaaacaaagccta 33590537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 27 - 241
Target Start/End: Complemental strand, 1567370 - 1567157
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||||||  ||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  1567370 attaaatttgaagaattcttattaaccctccaaaacccccaaaatccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatg 1567271  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||    |||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  |||||||||||||||||||| |||    
T  1567270 aagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcccttcccctcc 1567172  T
Q  227 aaactcgcaaacaaa 241  Q
    |||||||||||||||    
T  1567171 aaactcgcaaacaaa 1567157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 67 - 243
Target Start/End: Original strand, 32719408 - 32719582
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   |||||  ||||||||||    
T  32719408 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccc-ccaaagccctcctttcccattttc 32719506  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    |||||||| |||| |||  |  ||||||||| || | ||||||||||||||||||| ||||||||||||||||||||    
T  32719507 ctctatttcttccacttacttattccttttt-tccctagccttcccctcccttcccctccaaactcgcaaacaaagc 32719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 16 - 250
Target Start/End: Original strand, 24874916 - 24875146
Alignment:
Q  16 caataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggt 115  Q
    |||||| ||| ||||||||| ||||||| |||| |||| | | ||||| | |||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  24874916 caataacatatattaaatttaaagaatttatataaaccctccaaaacctcccaaaaccctcctccaatacaatgttttagttcc-ccaaatgagg-gggt 24875013  T
Q  116 tttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctc 215  Q
    || |||||||||||||||||| |||| ||||   ||||||||||||||||| | ||||| ||||  ||| |  ||||||||| || ||||| ||||||||    
T  24875014 ttagtattatgaagaaaagttgaccc-ccaaagccctcccctcccattttcttatatttcttccatttgcttattccttttt-tcccaagcattcccctc 24875111  T
Q  216 ccttcccatccaaactcgcaaacaaagcctaagga 250  Q
    |||| || | ||||||||||||||||| |||||||    
T  24875112 cctttcctttcaaactcgcaaacaaagtctaagga 24875146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 12779606 - 12779389
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||||||||| |||||||| | | ||| | | |||||||||||||||||||||  ||||||||||  ||||| || |||||||||||     
T  12779606 atagattaaatttgaagaattcttattaaccctccaaaatctc-caaaaccctcctccaatacaactttttagttcccccaaataagaagggttttgtag 12779508  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    || |||||||||||||||| ||||   ||| || |||||||||||||||||| |||  |||| || ||||||||| || ||| ||||||||||||||| |    
T  12779507 tacgaagaaaagttaaccc-ccaaagccct-ccttcccattttcctctatttattctacttgctcattcctttttttc-caaaccttcccctcccttcac 12779411  T
Q  223 atccaaactcgcaaacaaagcct 245  Q
     ||| ||||||||||||||||||    
T  12779410 ctcc-aactcgcaaacaaagcct 12779389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 11180191 - 11180338
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||||  ||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||   ||| || ||||||||||    
T  11180191 caaaaccctctaccaatacaattctttagttcctccaaatgaggagggttttgtattatggagaaaagttaaccccccaaagccct-ccttcccattttc 11180289  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    |||||||| |||  |||| || ||||||||| || |||||||||||||||    
T  11180290 ctctatttcttctacttgctcattccttttt-tcccaagccttcccctcc 11180338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 67 - 248
Target Start/End: Complemental strand, 6855683 - 6855504
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||  ||||||||| ||||||||||| |||| |||   |||||  |||||||||||||||||||||| ||||    || |||||||||||||    
T  6855683 caaaaccctccgacaatacaattttttagttcctccaaacgagataggtttaatattatgaagaaaagttaaccccccaaagctcttccctcccattttc 6855584  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||| || |  ||| || || |||||| || ||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  6855583 ctctatttatttcatttgctcatt-ctttttttc-caagccttcccctcccttcccttccaaactcacaaacaaaacctaag 6855504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 240
Target Start/End: Original strand, 28551919 - 28552091
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||||||||| |||||||  || ||||| || ||||||||||| ||||||||||||||||||||| ||||||  |||   | |||||||||||||||     
T  28551919 aaaaccctcctc-aatacaaatttatagtttctccaaatgaggagagttttgtattatgaagaaaagctaacccctcaaagccatcccctcccattttct 28552017  T
Q  168 tctattttttccgcttggtcgttcctttttatct-caagccttcccctcccttcccatccaaactcgcaaacaa 240  Q
    ||||||| |||| |||| || ||||||||| | | |||||| || | | ||||||| |||||||||||||||||    
T  28552018 tctatttcttccacttgctcattcctttttttttccaagccatctcattccttcccctccaaactcgcaaacaa 28552091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 67 - 245
Target Start/End: Complemental strand, 26713912 - 26713735
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgt-attatgaagaaaagttaaccctccaatttcctcccctcccatttt 165  Q
    |||||||||||||||||||||| ||| ||||||  |||||||||||| |||| | || |||||||||| |||||||  |||   |||||||||||| | |    
T  26713912 caaaaccctcctccaatacaatttttgagttccc-caaatgaggaggattttcttatcatgaagaaaaattaacccctcaaagccctcccctcccaatgt 26713814  T
Q  166 cctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     |||||||| |||| |||| || ||||||| | ||  || || |||||||||||||| ||||||||||||||||||||||    
T  26713813 actctatttcttccacttgctccttcctttat-tccaaaaccctcccctcccttcccctccaaactcgcaaacaaagcct 26713735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 217
Target Start/End: Original strand, 20820563 - 20820710
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    ||||| ||| ||||||||||| ||||||||||  |||| |||||| |||| ||||||||||||||||||||||| ||||   |||||||||||||||| |    
T  20820563 aaaactctcatccaatacaattttttagttcccccaaacgaggagagtttagtattatgaagaaaagttaaccccccaaagccctcccctcccatttttc 20820662  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctccc 217  Q
    | ||||| |||| |||| || |||  |||| || |||| |||||||||||    
T  20820663 tttatttcttccacttgttcattc--ttttttcgcaagtcttcccctccc 20820710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 32222095 - 32221978
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||| ||||||||||||||||||||| |||| | | ||| |||  ||||| ||||||||||||||| ||||||||||| ||||||||||| ||||  |||    
T  32222095 atagtttaaatttgaagaattcatataaaccctccaaaatccct-aaaactctcctccaatacaattttttagttcctccaaatgaggagagtttgatat 32221997  T
Q  123 tatgaagaaaagttaaccc 141  Q
    ||| |||||||||||||||    
T  32221996 tataaagaaaagttaaccc 32221978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 6688060 - 6688200
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgt---attatgaagaaaagttaaccctccaatttcctccc 155  Q
    ||||||| |||||| ||||||||||||||| ||||||||||   |||| ||||| |||| ||   || |||||||||||||||||||||||  |||||||    
T  6688060 aaaccccccaaaactctcctccaatacaattttttagttccct-aaataaggagagtttagtgtaataatgaagaaaagttaaccctccaaagtcctccc 6688158  T
Q  156 ctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||| ||||| |||||||||||||  |||  ||||||||||||    
T  6688159 ctctcatttccctctattttttctacttaatcgttccttttt 6688200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 2502358 - 2502478
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttc-ctacaaatgaggagggttttgtattat 125  Q
    |||||||||||||||||||||| |||| |   ||||||||||||| |||| ||||||||||| ||||||||| | |||||||| ||| ||||| ||||||    
T  2502358 attaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaatacaattttttagttctccacaaatgaagagagttttatattat 2502457  T
Q  126 gaagaaaagttaaccctccaa 146  Q
     ||||||| | ||||| ||||    
T  2502458 aaagaaaaataaaccccccaa 2502478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 22788551 - 22788620
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaa 138  Q
    ||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||| ||||||||||||    
T  22788551 aaaaccctcctccaatacaattttttagttcct-caaatgagaagagttttgtattatcaagaaaagttaa 22788620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 26574383 - 26574487
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  26574383 atagattgaatttgaaaaattcatataaaccatccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 26574482  T
Q  123 tatga 127  Q
    |||||    
T  26574483 tatga 26574487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 4089389 - 4089494
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||| || ||| |||  ||| ||| ||| ||||| ||| |||||||||||| | ||||||||| ||||||||||| ||||| |||| ||    
T  4089389 attaaatttgaagaaatcgtataaactcttccaaagcccccaaaatccttctccaatacaatttcttagttcct-caaatgaggagagttttatattttg 4089487  T
Q  127 aagaaaa 133  Q
    |||||||    
T  4089488 aagaaaa 4089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 24734973 - 24734757
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  ||||||  |||||||||| ||||||||||  || ||||||  ||||||||| || |||| |||    
T  24734973 atagattgaatttgaaaaattcatataaaccctccataaccccctaaaaccctcccccaatacaat--ttgagttcccccaaatgagggggattttttat 24734876  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| ||||||||||||  |  ||      ||||||||||||    
T  24734875 tatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctcgttccttttttccaaaa------ccctcccttccc 24734782  T
Q  223 atccaaactcgcaaacaaagcctaa 247  Q
     ||||||||| ||||||||||||||    
T  24734781 ctccaaactcccaaacaaagcctaa 24734757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 23095116 - 23095220
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||  | |  |||||| ||||||||||| || ||||||| ||||||||||  ||||||||| || |||| |||    
T  23095116 atagattgaatttgaaaaattcatataaactctccataaccccccaaaaccctccccccatacaattttttagttcccccaaatgagggggattttttat 23095215  T
Q  123 tatga 127  Q
    |||||    
T  23095216 tatga 23095220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 24379684 - 24379620
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||| ||||||||| ||| |||| ||  ||||||||||||||||||||| |||||||||    
T  24379684 aaaccctccttcaatacaatttttgagtttctctaaatgaggagggttttgtattttgaagaaaa 24379620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 33184282 - 33184196
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtttt 118  Q
    |||||||||||||||||| |||| |   || || | |||||||||| || |||||||| ||||||||||| |||||||||||||||||    
T  33184282 aatttgaagaattcatataaaccatctcaatccacccaaaaccctcttctaatacaattttttagttcct-caaatgaggagggtttt 33184196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 4909903 - 4909989
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgag 109  Q
    ||||||| |||||||| |||| |||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||| ||||||||    
T  4909903 atagattgaatttgaaaaattgatataaaccctccacaaccccccaaaaccctcccccaatacaatttttaagttcctccaaatgag 4909989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 29241693 - 29241648
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  29241693 aagccctcccctcccttcccctccaaactcccaaacaaagcctaag 29241648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 133
Target Start/End: Complemental strand, 4464992 - 4464929
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||||||| ||||||||||  |||||||||| |||| | |||| |||||||||    
T  4464992 aaaccctcctccaatacaattttttagttcc-ccaaatgaggaaggttgtatattttgaagaaaa 4464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 15615758 - 15615686
Alignment:
Q  25 agattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagtt 97  Q
    |||||||||||||||||||||||| |||| | | ||| |||  |||||||| |||||||||||| ||| ||||    
T  15615758 agattaaatttgaagaattcatataaaccctccaaaatcccttaaaacccttctccaatacaatttttgagtt 15615686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Complemental strand, 1029386 - 1029300
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgag 109  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| | |||||||| ||||| ||||  ||||||||    
T  1029386 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccctaatacaattttttacttcccccaaatgag 1029300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Complemental strand, 33212384 - 33212307
Alignment:
Q  63 cccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||||||||| || ||||||||||  ||||||||||  |||||||| || || |||||||||||||| || |||||||    
T  33212384 cccacaaaaccgtcatccaatacaactttttagttcc-ccaaatgagcagagtgttgtattatgaagacaaattaaccc 33212307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 83
Target Start/End: Original strand, 13120410 - 13120468
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaat 83  Q
    ||||||| |||||||||||||||| | |||| ||| |||  ||||||||||||||||||||    
T  13120410 atagattgaatttgaagaattcatgtaaaccgttcaaaa--ccacaaaaccctcctccaat 13120468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 19477349 - 19477300
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaac 72  Q
    |||||||||||||||||||||||||| || ||| | |||| |||||||||    
T  19477349 atagattaaatttgaagaattcatataaatcttccaaaactccacaaaac 19477300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 33755106 - 33754928
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||| |||||||||||||||||  ||||||| |  |||||||||| |||||  ||      ||||||||||| || ||||   | | || |     
T  33755106 aaaccccccaaagccctcctccaatacaattgtttagtttccccaaatgaggaaggtttacta------agaaaagttaatcccccaaaacctttccata 33755013  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    |||||||||||||||| |||| |||| || ||| ||||| || |||| ||||| ||| |||||| |||| |||| ||| ||||||    
T  33755012 ccattttcctctatttattccacttgctcattcttttttttcccaagtcttcctctcacttcccctccacactcacaatcaaagc 33754928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 2365730 - 2365809
Alignment:
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| |||| |||| || ||||||||| ||  || ||| |||||||| |||| ||||||||| |||||||||||||||    
T  2365730 tctatttcttccacttgctccttcctttttttcaaaaccct-cccctcccctcccctccaaactcccaaacaaagcctaag 2365809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 184 - 403
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  184 atagattaaatttgaagaattcttattaaccctccaaaaccccgcaaaaccctcctccaatacaattttttagttcctccaaataaggagggttttgtat 283  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||| ||||    |||| ||||||||||||||||||| |||| |||| |  ||| |||||||| ||||| |||||||||||||||    
T  284 tatgaagaaaagttaaccc-ccaaagctctcctctcccattttcctctatttcttccacttgcttattcttttttatcccaagctttcccctcccttccc 382  T
Q  223 atccaaactcgcaaacaaagc 243  Q
     ||||||||||||||||||||    
T  383 ctccaaactcgcaaacaaagc 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 5e-63; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 36269836 - 36269611
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||||||||||||| || | | | ||||||| | |||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  36269836 atagattgaatttgaagaattcatataaatcctccaaaaccccccgaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtat 36269737  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||| ||||   |||||||||||||||| |||||||| |||| |||| || ||||||||| || |||||||||||||| ||||||    
T  36269736 tatgaagaaaagttaaccccccaaagccctcccctcccatttttctctatttcttccacttgctcattccttttt-tcccaagccttcccctcacttccc 36269638  T
Q  223 atccaaactcgcaaacaaagcctaagg 249  Q
     ||||||||||||||||||||||||||    
T  36269637 ctccaaactcgcaaacaaagcctaagg 36269611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 36886962 - 36886740
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||||||| |||| | | |||||||  |||||||||||||||| |||| ||||||||||   |||||||| |||||| ||||    
T  36886962 atagattaaatttgaaaaattcatataaaccctccaaaacccccaaaaaccctcctccaatgcaattttttagttccccaaaatgaggggggtttagtat 36886863  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||| ||||   ||||||||| ||||||||||||||| |||| |||| || ||||||||| || |||||||||||||||||||||    
T  36886862 tatgaagaaaagttaaccc-ccaaagccctcccctctcattttcctctatttcttccacttgctcattccttttt-tcccaagccttcccctcccttccc 36886765  T
Q  223 atccaaactcgcaaacaaagcctaa 247  Q
     ||||||||||||||||||||||||    
T  36886764 ctccaaactcgcaaacaaagcctaa 36886740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 29092175 - 29091957
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| |||||||| |||||||| | | ||||||| |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  29092175 attaaatttaaagaattcttattaaccctccaaaaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 29092076  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||| ||||||||||||||||||| |||| |||  |  ||| ||||| || ||| ||||||||||||||||  |||    
T  29092075 aagaaaagttaaccc-ccaaagccctcctctcccattttcctctatttcttccacttacttattcattttt-tcccaaaccttcccctcccttcctctcc 29091978  T
Q  227 aaactcgcaaacaaagcctaa 247  Q
    |||||||||||||||||||||    
T  29091977 aaactcgcaaacaaagcctaa 29091957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 17760507 - 17760682
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    |||| |||||||||||    
T  17760507 caaaacccccctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttc 17760606  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaag 242  Q
    |||||||| |||| |||| |  ||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  17760607 ctctatttcttccacttgcttattcttttttatcccaagccttcccctcccttcccctccaagctcgcaaacaaag 17760682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 37649608 - 37649825
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||| ||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||     
T  37649608 attaaatttgaagaattcttattaaccctccaaaactcccaaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattata 37649707  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||| | ||||   ||||| ||||||||||||||||||| |||| |||  |  ||| ||||| || ||||||||| ||||| ||||| |||    
T  37649708 aagaaaagttaacaccccaaagccctcctctcccattttcctctatttcttccacttacttattcattttt-tcccaagccttctcctccattcccctcc 37649806  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  37649807 aaactcgcaaacaaagcct 37649825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 27 - 216
Target Start/End: Complemental strand, 5584594 - 5584406
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||  || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  5584594 attaaatttgaagaattcttattaaccctcccaaaaaccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 5584495  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||| ||||   ||||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  ||||||||||||||    
T  5584494 aagaaaagttaaccccccaaagccctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcc 5584406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 27 - 231
Target Start/End: Original strand, 41817291 - 41817493
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||| || |||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  41817291 attaaatttgaagaattcttattaaccctccaaaactccccaaaaccctcctccaatacaattttttagttcctccaaatgatgagggttttgtattatg 41817390  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||  |||||| ||||||||||||||||||| |||| |||  |  ||||||||| || |||| || | ||||||||||| |||    
T  41817391 aagaaaagttaaccc-ccaaagtcctcctctcccattttcctctatttcttccacttacttattcctttttttc-caagtctcctcctcccttcccctcc 41817488  T
Q  227 aaact 231  Q
    |||||    
T  41817489 aaact 41817493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 67 - 245
Target Start/End: Complemental strand, 27255258 - 27255081
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||||| || ||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||   ||||| |||||||||||    
T  27255258 caaaaccctcccccgatacatttttttagttccttcaaatgaggagggttttgtattatgaagaaaagttaacctcccaaagccctcctctcccattttc 27255159  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||| |||| |||| || ||||||||| ||||||| ||||||||  |||||| ||||||||||||||||||||||    
T  27255158 ctctatttcttccacttgctcattccttttt-tctcaagtcttcccctttcttcccctccaaactcgcaaacaaagcct 27255081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 34154360 - 34154540
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||   ||||  ||  |||||||    
T  34154360 caaaacccccctccaatacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaagttaaccccccaaagccctcatctttcattttc 34154459  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||| |||| |||  |  ||||||||| || ||||||||| ||||||||||| |||||||||||||||||||||||||    
T  34154460 ctctatttcttccacttacttattccttttt-tcccaagccttctcctcccttcccctccaaactcgcaaacaaagcctaag 34154540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 27 - 179
Target Start/End: Complemental strand, 46001655 - 46001504
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||| |||||| |||||||| ||||||||||| ||||||||||||||||| |||||||    
T  46001655 attaaatttgaagaattcttattaaccctacaaaaccccccaaaactctcctcaaatacaattttttagttcctccaaatgaggagggttttatattatg 46001556  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    |||||||||||| |||||||   ||||| ||||||||||||||||||| ||||    
T  46001555 aagaaaagttaa-cctccaaaaccctcctctcccattttcctctatttcttcc 46001504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 243
Target Start/End: Original strand, 52068162 - 52068347
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaa---ccctccaatttcctcccc 156  Q
    |||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||   ||| ||||   ||||| |    
T  52068162 aaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaacccccccccaaagccctcctc 52068261  T
Q  157 tcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    |||||||||||||||||| ||||  ||  |  || |||||| |||||||||||||||||| ||||| |||||||||| |||||||||    
T  52068262 tcccattttcctctatttcttccatttacttatttcttttt-tctcaagccttcccctccattcccctccaaactcggaaacaaagc 52068347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 27 - 136
Target Start/End: Complemental strand, 2909207 - 2909098
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||||||| |||||||| |||||||    
T  2909207 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgagtagggttttctattatg 2909108  T
Q  127 aagaaaagtt 136  Q
    ||||||||||    
T  2909107 aagaaaagtt 2909098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 17556724 - 17556540
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||||||||| ||| ||||||||||  ||||||||||||||||| |||| ||||||||| | | ||| ||||   |||| ||||    
T  17556724 aaaccccccaaaaccctcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaaaataagccccccaa-agcctctcctc 17556626  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||| | |||||||||| |||| |||  || ||||||||| ||| || || |||||||||||||| ||||||||||||||||||||||    
T  17556625 ccaatgtcctctatttcttccacttactccttcctttttttctgaa-ccctcccctcccttcccctccaaactcgcaaacaaagcct 17556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 249
Target Start/End: Original strand, 49102986 - 49103164
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||||||||||||| ||||||||||  ||||||||||||||||| | || ||||||||| | ||||||||||   || | ||||||| | ||||    
T  49102986 aaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaaataaaccctccaa-agcccctcctcccaatgtcct 49103084  T
Q  169 ctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||| |||| |||  || | ||||||| || ||| || |||||||||||||| |||||||||||||||| |||||||||    
T  49103085 ctatttcttccacttactcctccctttttttc-caaaccctcccctcccttcccctccaaactcgcaaacatagcctaagg 49103164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 197
Target Start/End: Complemental strand, 33324681 - 33324553
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||||||||| |||||||| ||||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||   |||| | |||||||||||    
T  33324681 aaaaccctcctctaatacaat-ttttagttccctcaaatgaggagggtttagtattatgaagaaaagttaaccccccaaagccctctcttcccattttcc 33324583  T
Q  168 tctattttttccgcttggtcgttccttttt 197  Q
    ||||||| |||  |||| || |||||||||    
T  33324582 tctatttcttctacttgctcattccttttt 33324553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 52073480 - 52073657
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||||||| | |||||| ||| ||||||  |||||||||||||||||| ||||||||||||| | || || ||||   | ||||||| || | ||    
T  52073480 caaaaccctcctctagtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaaatgaaacc-ccaaagccttcccctctcaatgtc 52073578  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     ||||||| |||| |||| || ||||||||| |   || || |||||||||||||| ||||||||||||||||||||||    
T  52073579 atctatttcttccacttgctccttcctttttttgcaaacccctcccctcccttcccctccaaactcgcaaacaaagcct 52073657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 69824 - 69704
Alignment:
Q  25 agattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||||||||||| ||||||||||| |||| ||| ||| ||  ||||||  |||  ||||||||| ||||||||||| |||| ||||||||||| ||||||    
T  69824 agattaaatttggagaattcatataaacccttcaaaatcctccaaaactttccatcaatacaattttttagttcct-caaacgaggagggtttagtatta 69726  T
Q  125 tgaagaaaagttaaccctccaa 146  Q
    ||||||||||||||||| ||||    
T  69725 tgaagaaaagttaaccccccaa 69704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 39886912 - 39887088
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcct-ccaatacaatgttttagttcctac-aaatgaggagggttttgt 120  Q
    |||||||||||||||||||||||||| |||  | | ||| ||| ||||||  |  | |||||||||| |||||||||| || ||||||||||||||| ||    
T  39886912 atagattaaatttgaagaattcatataaactctccaaaaacccccaaaactttttttccaatacaattttttagttcccaccaaatgaggagggtttagt 39887011  T
Q  121 attatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||||||||||||||||||||  ||||   ||||||||| ||||| ||| ||||| |||| |||| || ||| |||||    
T  39887012 attatgaagaaaagttaaccacccaaagccctcccctctcatttccctttatttcttccacttgctcattctttttt 39887088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 32287669 - 32287555
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||| | |||| |||  | | ||||||| |||||||||| ||||||||||| ||||||||||| ||||||| |||| || ||||||| |    
T  32287669 attaaatttgaagaaatgatataaactctccaaaacccctcaaaaccctcatccaatacaattttttagttcct-caaatgaagaggattgtgtattaag 32287571  T
Q  127 aagaaaagttaaccct 142  Q
    ||||||||||||||||    
T  32287570 aagaaaagttaaccct 32287555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 50226088 - 50225982
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    ||||| ||||||||||||||| ||||||||| | |||||||| |||||||  |||||||||||||||||||||| ||||  || || |||  ||||||||    
T  50226088 aaaacgctcctccaatacaattttttagttcttccaaatgagaagggtttaatattatgaagaaaagttaaccccccaaaatcttcgcctttcattttcc 50225989  T
Q  168 tctattt 174  Q
    |||||||    
T  50225988 tctattt 50225982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 12625806 - 12625921
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||| |||||||| ||| ||||||||| |||||||| ||||||| |||||| ||||||||||||||  |||||||| || |||||||||||  ||    
T  12625806 aataacatacattaaattcgaataattcatataaacctttccaaaccccccaaaactctcctccaatacaagtttttagtt-ctccaaatgaggagattt 12625904  T
Q  117 ttgtattatgaagaaaa 133  Q
    || |||| |||||||||    
T  12625905 ttatattttgaagaaaa 12625921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 197
Target Start/End: Complemental strand, 7915603 - 7915432
Alignment:
Q  26 gattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    ||||||||||||||||||||| | |||| | |  |||| | |||||||||||||||||||||| ||| | | ||   |||||||||||||| | ||||||    
T  7915603 gattaaatttgaagaattcatgtaaaccctccagaacctcccaaaaccctcctccaatacaatttttgaatcccccaaaatgaggagggttctatattat 7915504  T
Q  126 gaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    |||||||| | ||||| ||||   ||||| ||||||   | ||||||||||||| |||| || |||||||||    
T  7915503 gaagaaaaatgaaccccccaaagccctcctctcccaaagttctctattttttccacttgctccttccttttt 7915432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 28848821 - 28848887
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||||||||| ||| ||||||  ||||||||||||||||||| ||||||||||||    
T  28848821 caaaaccctcctccaatacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaa 28848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 27500077 - 27499853
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| || | | |  |||||| ||||||||||| || ||||||| ||| ||||||  ||||||||| || |||| |||    
T  27500077 atagattgaatttgaaaaattcatataaatcctccataaccccccaaaaccctcccccgatacaatttttgagttcccccaaatgagggggattttttat 27499978  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| || ||||||||| ||  || || ||||||||| ||||    
T  27499977 tatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttcctttttttc-aaaaccctcccctcccctccc 27499879  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     | ||||||| |||||||||||||||    
T  27499878 cttcaaactcccaaacaaagcctaag 27499853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 25561300 - 25561414
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||| |||||||||||||||||||||| |||  | | ||||||| |||||||||||||||||| ||| ||||||||||  ||||||| || ||||    
T  25561300 aataacatatattaaatttgaagaattcatataaactctcccaaacccc-caaaaccctcctccaatataattttttagttcc-ccaaatgacgatggtt 25561397  T
Q  117 ttgtattatgaagaaaa 133  Q
    || |||| |||||||||    
T  25561398 ttatattttgaagaaaa 25561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 62 - 245
Target Start/End: Complemental strand, 12293864 - 12293682
Alignment:
Q  62 ccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctccca 161  Q
    |||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| ||||||||  |||| || | ||||||    |||| |||||||    
T  12293864 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaatttaacctccatagccctctcctccca 12293765  T
Q  162 ttttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     |||| ||||||| |||| |||| || ||||||||| ||  || || ||||||| | |||| ||||||||| ||||||||||||    
T  12293764 gtttcttctatttcttccacttgatccttccttttt-tccaaaaccctcccctctcctcccctccaaactcccaaacaaagcct 12293682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 41432750 - 41432863
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcga----aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtttt 118  Q
    |||||||||||||||||||||||| | |||| | | |    |||||| |||||||||||||||||||||  ||| ||| ||  |||||||||||||||||    
T  41432750 atagattaaatttgaagaattcatgtaaaccctccaaccaaaaccccccaaaaccctcctccaatacaaattttgagtcccc-caaatgaggagggtttt 41432848  T
Q  119 gtattatgaagaaaa 133  Q
     ||||||||||||||    
T  41432849 atattatgaagaaaa 41432863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 102 - 247
Target Start/End: Complemental strand, 50587061 - 50586918
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct 201  Q
    |||||||||||| ||||||||||||||||||| | ||||| ||||   ||| ||||| || | |||||||||| |||| |||| || ||||||||| ||     
T  50587061 caaatgaggaggattttgtattatgaagaaaaatgaaccccccaaagccct-ccctctcaatgtcctctatttcttccacttgctccttccttttt-tcc 50586964  T
Q  202 caagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
     ||||  ||| |||||||||| |||||||| |||||||| ||||||    
T  50586963 aaagctctcctctcccttcccctccaaacttgcaaacaaggcctaa 50586918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 138
Target Start/End: Original strand, 4204774 - 4204881
Alignment:
Q  30 aaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaag 129  Q
    |||||||||| |||||||| |||| | | |||||||  ||||| || || |||| |||| ||||||||||  |||||||| ||| |||||||||||||||    
T  4204774 aaatttgaagcattcatataaaccctccaaaacccccaaaaactctgcttcaatgcaattttttagttcccccaaatgagtagg-ttttgtattatgaag 4204872  T
Q  130 aaaagttaa 138  Q
    |||||||||    
T  4204873 aaaagttaa 4204881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 7964067 - 7963963
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||  |||  |||||| ||||||||||| |||||||||| ||| ||||||| ||||||||| || |||| ||     
T  7964067 atagattgaatttgaaaaattcatataaacgcttcataaccccccaaaaccctcccccaatacaatttttgagttcctccaaatgagggggattttttac 7963968  T
Q  123 tatga 127  Q
    |||||    
T  7963967 tatga 7963963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 23871451 - 23871555
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | || |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||  | |||| |||    
T  23871451 atagattgaatttgaaaaattcatataaaccctccgtaaccccccaaaaccctccgccaatacaatttttgagttcccccaaatgagggagattttttat 23871550  T
Q  123 tatga 127  Q
    |||||    
T  23871551 tatga 23871555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 37955216 - 37955117
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattt 174  Q
    ||||| |||||||||||||| ||| | ||||| |||||  ||||||||||||||||||| ||||| ||||||   ||||||||||| || |||| |||||    
T  37955216 tcctcgaatacaatgttttatttctttcaaataaggagaattttgtattatgaagaaaaattaacactccaaaaccctcccctcccgttgtcctatattt 37955117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 24436920 - 24437030
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| || |||||| || | |  ||||| |  ||||||||||||| |||||||| |||||  |||  ||||||||||||||||| |||    
T  24436920 atagattaaatttgaataaatcatataaatcctctgaaactctccaaaaccctcctctaatacaattttttaactcccccaaatgaggagggttttatat 24437019  T
Q  123 tatgaagaaaa 133  Q
    | |||||||||    
T  24437020 tttgaagaaaa 24437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 52331138 - 52331032
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||| |||||| |||| ||  |||| ||  | |||| || || | |||||| ||| |||||||||||||||||| | ||||||||||||    
T  52331138 attaaatttgaagaagtcatataaaccctttaaaacacctaacaaccttcatcgagtacaatttttaagttcctacaaatgaggatgattttgtattatg 52331039  T
Q  127 aagaaaa 133  Q
    |||||||    
T  52331038 aagaaaa 52331032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 19652283 - 19652392
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||| |||||||||||||| || | |||  |||||| ||||||  | |||||||||||| ||| ||||||| ||||| | |||  ||||||||    
T  19652283 atagattaaatatgaagaattcatataaatccttcagaacccctcaaaacttttctccaatacaatctttgagttcctccaaattatgagaattttgtat 19652382  T
Q  123 tatgaagaaa 132  Q
    || |||||||    
T  19652383 taagaagaaa 19652392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 50476586 - 50476521
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||| || |||||||||||||| ||||    
T  50476586 aaaaccctcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaaa 50476521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 133
Target Start/End: Original strand, 27102814 - 27102922
Alignment:
Q  25 agattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||||||||||||||||||||||| |||||||| |||||   |||||| | |   ||||||||| ||| |||| |  ||||||| |||  ||||||||||    
T  27102814 agattaaatttgaagaattcatataaacctttcaaaacctttcaaaacacactctcaatacaatttttgagtttccccaaatgaagagcattttgtatta 27102913  T
Q  125 tgaagaaaa 133  Q
    |||||||||    
T  27102914 tgaagaaaa 27102922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 33579282 - 33579219
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaa 132  Q
    ||||||||||||||||||||  ||| ||||||  |||||||||||||||||||||||| ||||||    
T  33579282 aaaaccctcctccaatacaacttttgagttccc-caaatgaggagggttttgtattataaagaaa 33579219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 41427982 - 41428129
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||| ||||||||||||||| | || |||||| | ||| ||| ||||| |||||||||||| ||| ||| ||||||  |||||||||||  | ||  ||    
T  41427982 atagaataaatttgaagaatttacataaaccttccaaaatcccccaaaatcctcctccaatataatttttgagttcc-ccaaatgaggagattctttcat 41428080  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctcta 171  Q
    ||||||||||| |||||||| |||    ||||| ||||| |||||||||    
T  41428081 tatgaagaaaaattaacccttcaaaactctcccatcccactttcctcta 41428129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 42333693 - 42333622
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaac 139  Q
    |||||| ||||||||||||||   |||||||||   ||||||||||||||||||||||||||||||| |||||    
T  42333693 caaaactctcctccaatacaactctttagttccct-aaatgaggagggttttgtattatgaagaaaaattaac 42333622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 50247692 - 50247584
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaac-cccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtttt 118  Q
    |||||||||| |||||||| ||||||||| |||| | |  ||| ||| | ||||||||| |||||||||| ||| |||||| | ||||||||||| ||||    
T  50247692 aagatagattgaatttgaaaaattcatataaaccctccataactcccccgaaaccctcccccaatacaatctttgagttcccataaatgaggaggatttt 50247593  T
Q  119 gtattatga 127  Q
     ||||||||    
T  50247592 ttattatga 50247584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 51303174 - 51303274
Alignment:
Q  33 tttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaa 132  Q
    |||||||||||||||| || | | | ||||||| ||||||||||||| ||| |||| ||| ||||||  |||||||||||| |||| | |||||| ||||    
T  51303174 tttgaagaattcatataaatcctccaaaacccctcaaaaccctcctcaaatgcaatttttgagttccaccaaatgaggaggattttatgttatgatgaaa 51303273  T
Q  133 a 133  Q
    |    
T  51303274 a 51303274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 23412000 - 23412051
Alignment:
Q  82 atacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||| ||||||||||| |||||||||||| ||||| |||||||||||||    
T  23412000 atacaattttttagttcctccaaatgaggaggattttgaattatgaagaaaa 23412051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 38795064 - 38794838
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccc-cacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgta 121  Q
    ||||||| || ||||| ||||||||| |||| | | ||| || | ||||||||||| |||||| ||| ||  ||||||  ||||||||| || |||| ||    
T  38795064 atagattgaaattgaaaaattcatataaaccctccaaaaacctcccaaaaccctcccccaataaaattttgaagttcccccaaatgagggggatttttta 38794965  T
Q  122 ttatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcc 221  Q
    ||||||  ||||  | | |||||||   |||| ||||||| | || |||||||||||| |||| || ||||||||| ||  || ||| || ||||| ||     
T  38794964 ttatgagtaaaaaattaacctccaaagccctctcctcccaatatcttctattttttccacttgctccttcctttttttcaaaaccct-ccactcccctcg 38794866  T
Q  222 catccaaactcgcaaacaaagcctaagg 249  Q
    | ||||||||| ||||||||||||||||    
T  38794865 cctccaaactcccaaacaaagcctaagg 38794838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 38795396 - 38795447
Alignment:
Q  25 agattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctc 76  Q
    |||||||||||||||||||||||| |||||| | ||||||| ||||||||||    
T  38795396 agattaaatttgaagaattcatataaaccttccaaaaccccccaaaaccctc 38795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 38795452 - 38795538
Alignment:
Q  158 cccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||| |||||||||| |||| |||| || ||||||||| ||||||| |||||| | ||||| | || |||||||||||||||||||    
T  38795452 cccattgtcctctatttcttccacttgctcattccttttt-tctcaagtcttccctttccttctcctctaaactcgcaaacaaagcct 38795538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 6015520 - 6015430
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaa-tgttttagttcctacaaatgaggagggtt 116  Q
    |||||||||||||||||||||| |||| |   |||||||  ||||||||| |||||||||| | ||||||||||  ||||| |||||||||    
T  6015520 attaaatttgaagaattcatataaaccctctcaaaccccttaaaaccctcatccaatacaatttttttagttccctcaaataaggagggtt 6015430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 43036354 - 43036423
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    ||||||||||||| |||||||||   ||||||||||||||||| |||| ||||||||| ||||||| ||||    
T  43036354 cctccaatacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaaaattaaccccccaa 43036423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 6538047 - 6537943
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||| ||||||| ||| ||   |||||||| |||| |||||||||||||| | ||||| || || |||| |||||| ||||| |||| ||    
T  6538047 attaaatttgaagagttcatataaacattctcaaaccccataaaatcctcctccaatacatttttttaatt-ctccaaacgaggagagttttatattttg 6537949  T
Q  127 aagaaa 132  Q
    ||||||    
T  6537948 aagaaa 6537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 32672648 - 32672584
Alignment:
Q  81 aatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    |||||||| |||||||| || |||| ||||||||||| |||| |||||||||||||||||| ||||    
T  32672648 aatacaattttttagtttct-caaacgaggagggtttagtatgatgaagaaaagttaaccccccaa 32672584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 33991763 - 33991808
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  33991763 aagccctcccctcccttcccctccaaactcccaaacaaagcctaag 33991808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 40136436 - 40136481
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||| | ||||||| |||||||||||||||||||||||||    
T  40136436 aagccttccctttccttcccctccaaactcgcaaacaaagcctaag 40136481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 43571829 - 43571784
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||    
T  43571829 aagccttcccctcccttcctctccaaactcccaaacaaagcctaag 43571784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 28718908 - 28719004
Alignment:
Q  152 tcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||| | |||||||||| |||| |||| |  ||||||||| ||  || || ||| |||| ||||| ||||||||||||||||||| |||||    
T  28718908 tcccctcccaatatcctctatttcttccacttgcttcttcctttttttccaaaaccctccactcctttcccctccaaactcgcaaacaaagtctaag 28719004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 32299324 - 32299376
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaaggaatctt 255  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| |||| ||||    
T  32299324 aagccctcccctcccttcccctccaaactcccaaacaaagccttaggattctt 32299376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 32300276 - 32300328
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaaggaatctt 255  Q
    ||||| |||||||||||||| ||||||||| |||||||||||| |||| ||||    
T  32300276 aagccctcccctcccttcccctccaaactcccaaacaaagccttaggattctt 32300328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 33854827 - 33854982
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||||||| |||  | | ||| | |  |||||||| ||||||  |||  |||||||| |  ||| ||| |||||||||||||    
T  33854827 atagattaaatttgaaaaattcatataaacgctccaaaatcaccaaaaacccttctccaaatcaactttttagtttcc-caattgaagagggttttgtat 33854925  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    ||||||||||| |||||||| |||    ||||||||| | | |||||||||| ||||    
T  33854926 tatgaagaaaaattaaccctgcaaaacactcccctcctaatatcctctatttcttcc 33854982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 33926095 - 33925940
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||||||| |||  | | ||| | |  |||||||| ||||||  |||  |||||||| |  ||| ||| |||||||||||||    
T  33926095 atagattaaatttgaaaaattcatataaacgctccaaaatcaccaaaaacccttctccaaatcaactttttagtttcc-caattgaagagggttttgtat 33925997  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    ||||||||||| |||||||| |||    ||||||||| | | |||||||||| ||||    
T  33925996 tatgaagaaaaattaaccctgcaaaacactcccctcctaatatcctctatttcttcc 33925940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 33991634 - 33991530
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||  |||| || ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  33991634 atagatttgatttaaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 33991535  T
Q  123 tatga 127  Q
    |||||    
T  33991534 tatga 33991530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 39889646 - 39889722
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||    
T  39889646 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcc 39889722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 45565356 - 45565392
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||||||||||||||||    
T  45565356 tcccctcccttcccctccaaactcgcaaacaaagcct 45565392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 42488615 - 42488702
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgagg 110  Q
    ||||||| |||||||| ||||||||| |||| |    |||||||||||||||||| || ||||||| ||| ||||||  |||||||||    
T  42488615 atagattgaatttgaaaaattcatataaaccctcaataaccccacaaaaccctcccccgatacaatttttgagttcccccaaatgagg 42488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 249
Target Start/End: Original strand, 51303348 - 51303386
Alignment:
Q  211 ccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||||||||| || |||||||||||||||||||||||    
T  51303348 ccctcccttcccctctaaactcgcaaacaaagcctaagg 51303386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 896357 - 896312
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||    
T  896357 aagccctcccctcccttctcctccaaactcccaaacaaagcctaag 896312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 896483 - 896568
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatga 108  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| |||||||||||  ||||||||| ||| ||||||  |||||||    
T  896483 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccacaatacaatttttgagttcccccaaatga 896568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 139
Target Start/End: Complemental strand, 10449817 - 10449780
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaac 139  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  10449817 caaatgaagagagttttgtattatgaagaaaagttaac 10449780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 30543385 - 30543450
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaa 132  Q
    |||||||||||  ||||||||| ||| ||||||  || ||||||| | ||||||||||||||||||    
T  30543385 caaaaccctccagcaatacaatttttgagttcccccacatgaggaagattttgtattatgaagaaa 30543450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 248
Target Start/End: Complemental strand, 2909050 - 2909018
Alignment:
Q  216 ccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| |||||||||||||||||||||||||    
T  2909050 ccttcccctccaaactcgcaaacaaagcctaag 2909018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 9595614 - 9595558
Alignment:
Q  77 ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||| |||||| ||||||||||  ||||| ||| || |||||||||||||||||||    
T  9595614 ctccactacaattttttagttcccccaaattagggggattttgtattatgaagaaaa 9595558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 9595788 - 9595824
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  9595788 tcccctcccttcccctccaaactcccaaacaaagcct 9595824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 15464038 - 15464078
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||||||||||| | ||||||| ||||||||||||||||    
T  15464038 tcccctcccttccccttcaaactcccaaacaaagcctaagg 15464078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 31920208 - 31920172
Alignment:
Q  206 ccttcccctcccttcccatccaaactcgcaaacaaag 242  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  31920208 ccttcccctcctttcccctccaaactcgcaaacaaag 31920172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 38795192 - 38795228
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  38795192 tcccctcccttcccctccaaactcccaaacaaagcct 38795228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 39179279 - 39179315
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  39179279 tcccctcccttcccctccaaactcccaaacaaagcct 39179315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 41432944 - 41432980
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  41432944 tcccttcccttcccctccaaactcgcaaacaaagcct 41432980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 45565178 - 45565119
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    ||||||||||| |||||||||| ||||||||||| |||||||||  | |||| ||||||||    
T  45565178 caaaaccctcccccaatacaattttttagttcct-caaatgagggagattttttattatga 45565119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 179
Target Start/End: Complemental strand, 47742580 - 47742468
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttt-tgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||| ||||||||||||||  |||||||| |  | |||||||||||||| ||||||| ||| |||| ||||||| ||||   |||||| || || | ||    
T  47742580 aaaactctcctccaatacaactttttagtttccccgaatgaggagggtttatgtattaggaacaaaaattaaccccccaaagccctcccttctcaatgtc 47742481  T
Q  167 ctctattttttcc 179  Q
    |||||||| ||||    
T  47742480 ctctatttcttcc 47742468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 3e-61; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 67 - 250
Target Start/End: Original strand, 29114265 - 29114448
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| |||||||||||    
T  29114265 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccattttc 29114364  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaagga 250  Q
    |||||||| |||| |||  |  ||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29114365 ctctatttcttccacttacttattcctttttttcccaagccttcccctcccttcccttccaaactcgcaaacaaagcctaagga 29114448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 12708826 - 12709043
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  12708826 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 12708925  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||| ||||||||||||||||||| |||| |||  |  || |||||| || |||||||||||||||  |||| |||    
T  12708926 aagaaaagttaaccccccaaagccctcctctcccattttcctctatttcttccacttacttatt-ctttttttcccaagccttcccctccaatcccctcc 12709024  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  12709025 aaactcgcaaacaaagcct 12709043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 38136826 - 38137041
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||| || |||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||    
T  38136826 attaaatttgaagaattcttattaaccctccaaaactcctcaaaaccctcctccaatacaattttttagttcctccaaatgagaagggttttgtattatg 38136925  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    || |||||||||||| ||||   ||||| || |||||||||||||||| |||| |||  |  ||||||||| |||||||||||||||||||||||| |||    
T  38136926 aaaaaaagttaaccccccaaagccctcctcttccattttcctctatttcttccacttacttattccttttt-tctcaagccttcccctcccttcccctcc 38137024  T
Q  227 aaactcgcaaacaaagc 243  Q
    |||||||||||||||||    
T  38137025 aaactcgcaaacaaagc 38137041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 30198763 - 30198979
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||| || |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  30198763 attaaatttgaagaattcttattaaccctccaaaactcctcaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 30198862  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||| |||| |||||||||||||| |||| |||  |  ||||||||| | ||||| |||||||||| ||||| ||     
T  30198863 aagaaaagttaaccccccaaagccctcctctcctattttcctctatttcttccacttacttattccttttt-tttcaagtcttcccctccattcccctct 30198961  T
Q  227 aaactcgcaaacaaagcc 244  Q
    ||||||||||||||||||    
T  30198962 aaactcgcaaacaaagcc 30198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 28 - 245
Target Start/End: Complemental strand, 33500607 - 33500392
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    ||||||||||| ||||| |||||||| | | || |||| ||||||||||| |||||||| | ||||||||||| ||||||||||||||||||| ||||||    
T  33500607 ttaaatttgaaaaattcttattaaccctccaaagccccccaaaaccctcc-ccaatacatttttttagttcctccaaatgaggagggttttgtcttatga 33500509  T
Q  128 agaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcca 227  Q
    || ||||||||| |  |||   ||||| ||||||||||||||||||| |||| |||| || ||||||||| |||||||||||||||||||||||| ||||    
T  33500508 aggaaagttaactcctcaaagccctcctctcccattttcctctatttcttccacttgctcattccttttt-tctcaagccttcccctcccttcccttcca 33500410  T
Q  228 aactcgcaaacaaagcct 245  Q
    ||||||||||||||||||    
T  33500409 aactcgcaaacaaagcct 33500392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 28175456 - 28175675
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| |||||||| |||||||| | | ||| ||| |||||||||||||| ||||||| ||||||||||| |||||||||||| ||||||||||||    
T  28175456 attaaatttaaagaattcttattaaccctccaaaatccctcaaaaccctcctcctatacaattttttagttcctccaaatgaggaggattttgtattatg 28175555  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||  ||||   ||||| ||||||||||||||||||| |||| |||  |  ||||||||| || ||||||||||||||||||||  |||    
T  28175556 aagaaaagttaacctcccaaagccctcctctcccattttcctctatttcttccacttacttattccttttt-tcccaagccttcccctcccttcctctcc 28175654  T
Q  227 aaactcgcaaacaaagcctaa 247  Q
    ||||||||||||||| |||||    
T  28175655 aaactcgcaaacaaaacctaa 28175675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 16318706 - 16318491
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||| |||||||| | | |||||||  ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||    
T  16318706 attaaatttgaataattcttattaaccctccaaaacccccaaaatccctcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatg 16318607  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    |||||||||||||||   ||   ||||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  |||||||||||||||||||| ||     
T  16318606 aagaaaagttaacccctgaaagccctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcccttcccctca 16318508  T
Q  227 aaactcgcaaacaaagc 243  Q
    |||||||||||||||||    
T  16318507 aaactcgcaaacaaagc 16318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 67 - 248
Target Start/End: Complemental strand, 45823604 - 45823424
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||| ||||||||| ||| |||| |  ||||||||||| |||||||||||||||||||||||||||||| ||   |||  ||||||||||||    
T  45823604 caaaaccctccttcaatacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaagttaaccctctaaaacccttacctcccattttc 45823505  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||| |||| |||| ||  |||||||| || ||||| ||||||||||||| | |||||||||||||||||||||||||    
T  45823504 ctctatttcttccacttgctcactccttttt-tcccaagcattcccctcccttctcttccaaactcgcaaacaaagcctaag 45823424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 243
Target Start/End: Original strand, 49668128 - 49668310
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||||||||||||| ||||||||||   |||||||||||||||  ||||||||||||||||||| |||||||   | | |||||    
T  49668128 aaaccccccaaaaccctcctccaatacaattttttagttcccttaaatgaggagggtttaatattatgaagaaaagttaa-cctccaaagccgtaccctc 49668226  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    ||||||| |||||||| |||| |||| || ||||||||| |||||| |||||||||| |||||  ||||||||||||||||||||    
T  49668227 ccatttttctctatttcttccacttgctcattccttttt-tctcaaaccttcccctcacttcctctccaaactcgcaaacaaagc 49668310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 59 - 245
Target Start/End: Original strand, 46176951 - 46177136
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||   |||||||||    
T  46176951 aaaccccccaaaaccctcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaaaattaaccccccaaaaccctcccctc 46177050  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||| | | |||||||| |||| |||| || || |||||| ||  || || ||||||||||| || ||||||||| ||||||||||||    
T  46177051 ccaatgtactctatttcttccacttgttcctt-ctttttttccaaaaccctcccctccctttccctccaaactcacaaacaaagcct 46177136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 214
Target Start/End: Complemental strand, 45971641 - 45971465
Alignment:
Q  35 tgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaag 134  Q
    |||| ||||||||| |||||| | ||| |||  |||| |||||||||||||||| ||||||||||  ||||||||| |||||| ||||||||||||||||    
T  45971641 tgaaaaattcatataaaccttccaaaatccccaaaaatcctcctccaatacaattttttagttcccccaaatgagg-gggtttagtattatgaagaaaag 45971543  T
Q  135 ttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccct 214  Q
    ||||||| ||||   ||||||||| ||||||||||||||| |||| |||| || ||||||||| || |||| ||||||||    
T  45971542 ttaaccc-ccaaaaccctcccctctcattttcctctatttcttccacttgctcattccttttt-tcccaagacttcccct 45971465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 243
Target Start/End: Complemental strand, 35959253 - 35959072
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||| ||||||||||||||  ||||||||||  |||||||||||||||||||||||||||||||| |||| || ||||   |||||||||    
T  35959253 aaaccccccaaaacgctcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaaacccccaaagccctcccctc 35959154  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
     || | | |||||||| |||| |||| || ||||| |||    |||  | |||||||||||||| ||||||||||||||||||||    
T  35959153 acaatgtactctatttcttccacttgctccttcctcttt---ccaaaacctcccctcccttcccctccaaactcgcaaacaaagc 35959072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 42650725 - 42650619
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | ||||| | |||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| ||    
T  42650725 attaaatttgaagaattcatataaaccatcccaaacctcccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatattttg 42650626  T
Q  127 aagaaaa 133  Q
    |||||||    
T  42650625 aagaaaa 42650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 41709110 - 41709322
Alignment:
Q  27 attaaatttgaagaatt-catattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    ||||||||||||||||| ||||| |||| | | || |||| ||||| |||| |||||| |||  ||||||||||    ||||| ||||||||  |||||     
T  41709110 attaaatttgaagaatttcatataaaccctcccaagccccccaaaatcctc-tccaatgcaaatttttagttccccagaatgaagagggtttaatattac 41709208  T
Q  126 gaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatc 225  Q
    |||||||||||||||| | ||  || |||| || ||||||||||||||| |||| |||| |||||||||||| || |||||||||||||| |||||| |     
T  41709209 gaagaaaagttaacccccaaaactc-tcccatctcattttcctctatttcttccacttgctcgttccttttt-tcccaagccttcccctctcttcccctg 41709306  T
Q  226 caaactcgcaaacaaa 241  Q
    |||||||||| |||||    
T  41709307 caaactcgcagacaaa 41709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 248
Target Start/End: Original strand, 7182179 - 7182403
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  7182179 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 7182278  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||| | | |||||||    ||| |||| || | || ||||||| |||| |||| || ||||||||| ||  || || ||||||||| ||||    
T  7182279 tatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttccacttgctccttccttttt-tccaaaaccctcccctcccctccc 7182377  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     ||||||||| |||||||||||||||    
T  7182378 ctccaaactcccaaacaaagcctaag 7182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 55509970 - 55509758
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||          ||||||  |||||||| |||| ||| |||| ||||||||||| |||||||  |  |||||||||    
T  55509970 atagattaaatttgaagaattcatat----------aaaccctccaaaacccccctcaaatgcaattttttagttcctccaaatgaaaaatgttttgtat 55509881  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||| ||||    ||||||||||||||| || ||||| |||| |||| || ||| ||||| || | |||||||| ||| ||| ||    
T  55509880 tatgaagaaaagttaaccc-ccaaagctctcccctcccatttttctttatttcttccacttgctcattcattttt-tcccgagccttcctctctctttcc 55509783  T
Q  223 atccaaactcgcaaacaaagcctaa 247  Q
     |||||||| ||||||||| |||||    
T  55509782 ctccaaacttgcaaacaaatcctaa 55509758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 133
Target Start/End: Complemental strand, 21443121 - 21443006
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||| |||||||||||||||||||||| |||||||| |||| |  |||||| || ||| |||| ||| ||||||||||| |||||||||||||||    
T  21443121 aataatatatattaaatttgaagaattcatataaacctttctaaactctccaaaactcttctctaatataattttttagttcct-caaatgaggagggtt 21443023  T
Q  117 ttgtattatgaagaaaa 133  Q
    || |||| |||||||||    
T  21443022 ttatattttgaagaaaa 21443006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 27143267 - 27143147
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttc-ctacaaatgaggagggttttgtattat 125  Q
    |||||||||||||||||||||| |||| |   ||||||||||||| |||| ||||||||||| ||||||||| | |||||||| ||| ||||| ||||||    
T  27143267 attaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaatacaattttttagttctccacaaatgaagagagttttatattat 27143168  T
Q  126 gaagaaaagttaaccctccaa 146  Q
     ||||||| | ||||| ||||    
T  27143167 aaagaaaaataaaccccccaa 27143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 248
Target Start/End: Complemental strand, 21081399 - 21081214
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||| ||| ||||||||||| ||| |||| |  ||||||||||||||||||| |||||||||||| | ||||||||||     ||||||| || | ||    
T  21081399 caaaactctcatccaatacaatttttaagttaccccaaatgaggagggttttgttttatgaagaaaaatgaaccctccaaaacattcccctctcaatgtc 21081300  T
Q  167 ctctattttttccgcttggtcgttc---ctttttatctc-aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
     ||||||| |||| |||| || |||   |||||| | || || || ||||||| |||||| |||||||||||||||||||||||||    
T  21081299 atctatttcttccacttgctccttccttctttttttttcaaacccctcccctctcttcccctccaaactcgcaaacaaagcctaag 21081214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 248
Target Start/End: Complemental strand, 52636844 - 52636630
Alignment:
Q  30 aaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaag 129  Q
    ||||||||| |||||| || |||| | | ||| ||| ||||||||| || |||||||| |||||||||| | ||||||||||||||||| ||||||||||    
T  52636844 aaatttgaataattcacataaaccct-ctaaatccctcaaaaccctacttcaatacaa-gttttagttc-tccaaatgaggagggttttatattatgaag 52636748  T
Q  130 aaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaa 229  Q
    |||| ||||||| ||||   ||||  || ||| | | |||||||| |||| |||| ||  |||||||| ||  ||    |||| ||||||||| ||||||    
T  52636747 aaaaattaaccccccaaagccctcatcttccaatgtactctatttcttccacttgctcagtccttttt-tccaaaattctcccatcccttcccctccaaa 52636649  T
Q  230 ctcgcaaacaaagcctaag 248  Q
    |||||||||||||||||||    
T  52636648 ctcgcaaacaaagcctaag 52636630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 23 - 248
Target Start/End: Original strand, 41363800 - 41364024
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| | || | |  |||||| ||||||||||| |||||||||| ||| ||||||  || |||||| || |||| |||    
T  41363800 atagattgaatttgaaaaattcatataatccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccacatgagggggattttttat 41363899  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| || ||||||||| ||  || || | ||||||| ||||    
T  41363900 tatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttt-tccaaaaccgttccctcccctccc 41363998  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     ||||||||| |||||||||||||||    
T  41363999 ctccaaactcccaaacaaagcctaag 41364024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 16422931 - 16422788
Alignment:
Q  103 aaatgaggagggttttgtattatga-agaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct 201  Q
    ||||||||| ||||| ||||||||| |||||| ||||||| | || | |||||||| |||||||||| ||||| ||||  ||| || ||| ||||| ||     
T  16422931 aaatgaggaaggtttagtattatgatagaaaaattaacccacaaagt-cctccccttccattttcctttatttcttccagttgctcattctttttt-tc- 16422835  T
Q  202 caagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| ||||||||||||||| ||||||||| |||||||| ||||||    
T  16422834 caagctttcccctcccttcccctccaaactcacaaacaaaacctaag 16422788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 32866714 - 32866833
Alignment:
Q  18 ataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttt 117  Q
    |||| |||||||||||||||| ||||||||| |||  ||  ||||||  |||||| |||||||  |||||| ||||||||||  |||||||||||   ||    
T  32866714 ataacatagattaaatttgaataattcatataaactctttaaaacccgtcaaaactctcctccgctacaattttttagttcc--caaatgaggagaactt 32866811  T
Q  118 tgtattatgaagaaaagttaac 139  Q
    |||||||||||||||| |||||    
T  32866812 tgtattatgaagaaaaattaac 32866833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 38366120 - 38365901
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | ||| | ||| ||||||||||| |||||||||| ||| ||||||  ||||||||  || |||| |||    
T  38366120 atagattgaatttgaaaaattcatataaaccct-cgataacccccaaaaccctcccccaatacaatttttgagttccc-caaatgagagggattttttat 38366023  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||  | | |||||||  ||||| ||| ||| | || ||||||| |||| |||| || ||||||||| ||| || |  ||||||||| ||||    
T  38366022 tatgagtaaaaaattaacctccaaagtcctctccttccaatgtcttctatttcttccacttgctccttccttttt-tctaaaactctcccctcccctccc 38365924  T
Q  223 atccaaactcgcaaacaaagcct 245  Q
     ||||||||| ||||||||||||    
T  38365923 ctccaaactcccaaacaaagcct 38365901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 51974375 - 51974271
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||| |||||| ||||||||| | ||||||||  ||||||| |||| |||||||||||||||||||||||| ||| |||  || ||||||| ||||||||    
T  51974375 aaaatcctccttcaatacaatttgttagttccc-caaatgaagaggattttgtattatgaagaaaagttaa-ccttcaaagtcgtcccctctcattttcc 51974278  T
Q  168 tctattt 174  Q
    |||||||    
T  51974277 tctattt 51974271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 222
Target Start/End: Original strand, 16461636 - 16461743
Alignment:
Q  113 ggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttccc 212  Q
    ||||| ||||||||||||||||||||||||| ||  | ||| ||||||||||||||||||||||||| |||  || ||| ||||| || |||| ||||||    
T  16461636 ggtttagtattatgaagaaaagttaaccctcgaaagt-ctcacctcccattttcctctattttttccacttattcattcttttttttc-caagtcttccc 16461733  T
Q  213 ctcccttccc 222  Q
    |||| |||||    
T  16461734 ctcctttccc 16461743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15498783 - 15498882
Alignment:
Q  24 tagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    |||||||||||| |||||||||| | |||| | | ||||| | |||||||||| ||||||||||| ||| ||||||  ||||||||||||||| ||||||    
T  15498783 tagattaaatttaaagaattcatgtaaaccctccaaaaccgcccaaaaccctcatccaatacaatttttgagttcc-ccaaatgaggagggttatgtatt 15498881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 18396258 - 18396171
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctccc 155  Q
    |||||||||||||||||||  | ||||||||||  |||||| |||||||||| |||| ||||||||| ||||||| ||| |||||||||    
T  18396258 caaaaccctcctccaatactgttttttagttccatcaaatggggagggttttatattttgaagaaaaattaaccc-ccactttcctccc 18396171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 62 - 246
Target Start/End: Original strand, 38317256 - 38317439
Alignment:
Q  62 ccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctccca 161  Q
    |||| ||||||||||| |||||||||| ||| ||||||  |||||||||||| |||| ||||||||  ||||  | | |||||||   |||| |||||||    
T  38317256 ccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttattatgagtaaaaaattaacctccaaagccctctcctccca 38317355  T
Q  162 ttttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
     | || ||||||| |||| |||| || ||||||||| ||  || || || |||||| |||| ||| ||||| |||||||||||||    
T  38317356 atgtcttctatttcttccacttgctccttccttttt-tccaaaaccctctcctcccctcccctcccaactcccaaacaaagccta 38317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 49936555 - 49936496
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagt 135  Q
    ||||||||||||| ||||||||||  ||||| |||||| |||||||||||||||||||||    
T  49936555 cctccaatacaattttttagttcccccaaattaggaggattttgtattatgaagaaaagt 49936496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 56504457 - 56504559
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | ||||||| | ||||||||||| |||||||||| ||| ||||||  |||||||||  | ||||||||    
T  56504457 atagattgaatttgaaaaattcatataaaccctccgaaacctcccaaaaccctcc-ccaatacaatttttgagttcccccaaatgagggagattttgtat 56504555  T
Q  123 tatg 126  Q
    ||||    
T  56504556 tatg 56504559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 368117 - 368044
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||||||||||| ||||| ||| ||| || |||  |||||||||||||||||||||||||||||||| |||||||    
T  368117 caaaaccctccttcaatataat-tttgagctcccccaaatgaggagggttttgtattatgaagaaaaattaaccc 368044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 9119779 - 9119883
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| || ||| | |||  |  |||||||||||||||||||||| |||||||| |  ||||||||||| ||||| |||| ||    
T  9119779 attaaatttgaagaattcatataaatcttcccaaatact-caaaaccctcctccaatacaatattttagtttc-ccaaatgaggagagttttatattttg 9119876  T
Q  127 aagaaaa 133  Q
    |||||||    
T  9119877 aagaaaa 9119883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 30307458 - 30307354
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | | ||||| ||||||||||    |||||||| ||||||||||  |||||||||||| |||| |||| ||    
T  30307458 attaaatttgaagaattcatat-aaccctcctacaccccccaaaaccctca---aatacaattttttagttcccccaaatgaggaggattttatattttg 30307363  T
Q  127 aagaaaagt 135  Q
    |||||||||    
T  30307362 aagaaaagt 30307354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 88
Target Start/End: Original strand, 32648992 - 32649057
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaat 88  Q
    |||||||||||||||| ||||||||| |||||| |  |||||| ||||||||||| ||||||||||    
T  32648992 atagattaaatttgaaaaattcatataaaccttccataaccccccaaaaccctcccccaatacaat 32649057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 31530112 - 31530008
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| |||| |||| |||  | |  |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||||| |||| |||    
T  31530112 atagattgaatttgaaaaattaatataaactctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggaggattttttat 31530013  T
Q  123 tatga 127  Q
    |||||    
T  31530012 tatga 31530008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 904293 - 904186
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||| |||||||| ||||||||| |||  | |  |||||| |||||||||||  ||||||||| ||| ||||||  ||||||||| || ||||     
T  904293 aagatagattgaatttgaaaaattcatataaactctccataaccccccaaaaccctccctcaatacaatttttgagttcccccaaatgagggggattttt 904194  T
Q  120 tattatga 127  Q
    ||||||||    
T  904193 tattatga 904186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 13984996 - 13985075
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    |||||||||||||||||||||| ||||||||||   |||||| ||||||||| |||| | ||||||| | | ||||||||    
T  13984996 caaaaccctcctccaatacaattttttagttccactaaatgaagagggttttatattttaaagaaaaataagccctccaa 13985075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 3075756 - 3075860
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| |||  || ||| ||||||||||||||||||  || |||||||| |  ||||||| ||||||||| |||  ||    
T  3075756 attaaatttgaagaattcatataaacc-ttcttaaaccctcaaaaccctcctccaatattattttttagtttc-gcaaatgaagagggttttatatcttg 3075853  T
Q  127 aagaaaa 133  Q
    |||||||    
T  3075854 aagaaaa 3075860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 20534148 - 20534194
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  20534148 aagccctcccctcccttcccctccaaactcccaaacaaagcctaagg 20534194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 24280007 - 24279933
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagtt 97  Q
    |||||||||||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||    
T  24280007 atagattaaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagtt 24279933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 42759640 - 42759746
Alignment:
Q  24 tagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    ||||||||||||||| ||||||| | |||| | | | | ||| ||||||||||||| | |||||| ||| ||||||  |||||||||||||| | | |||    
T  42759640 tagattaaatttgaaaaattcatgtaaaccctccaagatccctcaaaaccctcctctagtacaatttttgagttcccccaaatgaggagggtatagaatt 42759739  T
Q  124 atgaaga 130  Q
    |||||||    
T  42759740 atgaaga 42759746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 45899443 - 45899379
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||||||||| ||||||||||  ||||| ||| || |||||||||||||||||||    
T  45899443 caaaaccctcctccaatacaattttttagttcc-ccaaattagg-ggattttgtattatgaagaaaa 45899379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 4442012 - 4442077
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| ||||||||||| || ||| |||  ||||||||||||||||| |||| |||||||||    
T  4442012 aaaaccctcttccaatacaattttgtagctccctcaaatgaggagggttttatattttgaagaaaa 4442077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 15451325 - 15451422
Alignment:
Q  24 tagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    ||||||||||||||||||||||| | |||| | | ||||| | |||||||||| | ||||| ||  ||| ||||||  ||||||||||||||||||||||    
T  15451325 tagattaaatttgaagaattcatgtaaaccctccaaaaccgcccaaaaccctcatacaataaaa--tttgagttcc-ccaaatgaggagggttttgtatt 15451421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 176
Target Start/End: Original strand, 22165699 - 22165763
Alignment:
Q  111 agggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttt 176  Q
    ||||||| ||||||||||||||||||||||| ||||    ||||||||||||||| ||||||||||    
T  22165699 agggtttagtattatgaagaaaagttaaccc-ccaaaactctcccctcccatttttctctattttt 22165763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 22845092 - 22845047
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  22845092 aagccctcccctcccttcccctccaaactcccaaacaaagcctaag 22845047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 42954707 - 42954606
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||| ||||||||||||||||||| || ||||||   ||||| |   |||||||||||||||| ||| ||||||||    |||||||||||||||    
T  42954707 aataacatacattaaatttgaagaattcacataaaccttctcaaacctccttaaaccctcctccaatataattttttagttatctcaaatgaggagggtt 42954608  T
Q  117 tt 118  Q
    ||    
T  42954607 tt 42954606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 119
Target Start/End: Complemental strand, 7485910 - 7485814
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    ||||||||||||| || ||||| |||||||| | | ||||| |  |||||||||| |||||| | | |||||||||||  |||| ||||||||||||    
T  7485910 atagattaaatttaaaaaattcttattaaccctccaaaacctcctaaaaccctcccccaataaatttttttagttcctctaaataaggagggttttg 7485814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 8828236 - 8828295
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| || ||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  8828236 cctcctccattataatttttcagttcct-caaatgaggagagttttgtattatgaagaaaa 8828295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 11976926 - 11976814
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| || ||||||||| |||| | | |||| || | ||| |||| ||||||||||  ||||||||||   ||||||| |  |||||||||||||    
T  11976926 attaaatttaaaaaattcatataaaccctccaaaactcccctaaaacctcatccaatacaactttttagttcccttaaatgagaaatgttttgtattatg 11976827  T
Q  127 aagaaaagttaac 139  Q
    ||||||| |||||    
T  11976826 aagaaaaattaac 11976814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 20534020 - 20533916
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||  ||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||  | |||| |||    
T  20534020 atagattggatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggagattttttat 20533921  T
Q  123 tatga 127  Q
    |||||    
T  20533920 tatga 20533916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Original strand, 24683019 - 24683075
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||||||||||| |||||||| ||| || |||| |||||||| ||||||||||||||    
T  24683019 aaaaccctcctcaaatacaatttttgagctcctccaaatgagtagggttttgtatta 24683075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 31530244 - 31530288
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  31530244 aagccctcccctcccttcccctccaaactctcaaacaaagcctaa 31530288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 46176554 - 46176494
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||| |||| |||||| ||||| | | || |||||||||||||||||||    
T  46176554 cctcctccaatacaattttttcgttcctccaaattaaggggattttgtattatgaagaaaa 46176494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 46669991 - 46670043
Alignment:
Q  81 aatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||| ||||||||||  ||||||||||||||||| |||| |||||||||    
T  46669991 aatacaattttttagttccctcaaatgaggagggttttatattttgaagaaaa 46670043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 41844531 - 41844424
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    ||||||||||  ||||||| ||||||||| |||| | |  |||||| ||||||||||| | |||||||| ||| ||||||  |||||||||  | ||||     
T  41844531 aagatagattggatttgaaaaattcatataaaccctccataaccccccaaaaccctcccctaatacaatttttgagttcccccaaatgagggagattttt 41844432  T
Q  120 tattatga 127  Q
    ||||||||    
T  41844431 tattatga 41844424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 52430589 - 52430766
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    ||||| |||||||||| ||| |||||||| |   |||||||||| ||||| |||| ||||||||| | |  |||| ||  ||| | ||| ||| | ||||    
T  52430589 aaaccatcctccaatataattttttagtttccctaaatgaggagagttttatattttgaagaaaaataagtcctctaaagtcc-ctccttccaatgtcct 52430687  T
Q  169 ctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
     |||||||||| |||  || ||||||||| || ||| | || |  ||||||||| |||||||||||||||||||||||||    
T  52430688 atattttttccacttactccttcctttttttc-caaacatttcattcccttcccctccaaactcgcaaacaaagcctaag 52430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 675274 - 675240
Alignment:
Q  214 tcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||||| |||||||||||||||||||||||||    
T  675274 tcccttcccctccaaactcgcaaacaaagcctaag 675240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 109
Target Start/End: Original strand, 3127000 - 3127085
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgag 109  Q
    ||||||| |||||||| ||||||||| |||| | |  ||||||  ||||||||||||||||||||| ||| ||||||  ||||||||    
T  3127000 atagattgaatttgaaaaattcatataaaccctccttaaccccg-aaaaccctcctccaatacaatttttgagttcccccaaatgag 3127085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 13270046 - 13269936
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| ||||   |  |||||| |||||||||||  ||||||||| ||| |||||   |||||||||  | |||| |||    
T  13270046 atagattgaatttgaaaaattcatataaaccccccataaccccccaaaaccctcccacaatacaatttttgagttctcccaaatgagggagattttttat 13269947  T
Q  123 tatgaagaaaa 133  Q
    |||||||||||    
T  13269946 tatgaagaaaa 13269936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 241
Target Start/End: Original strand, 16535912 - 16535950
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaa 241  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  16535912 aagccctcccctcccttcccatccaaactcccaaacaaa 16535950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 18319712 - 18319770
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||| | ||||||||||  |||||| |||||||||| |||| |||||||||    
T  18319712 tcctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaa 18319770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 18398969 - 18398911
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||| | ||||||||||  |||||| |||||||||| |||| |||||||||    
T  18398969 tcctccaatacagttttttagttccatcaaatggggagggttttatattttgaagaaaa 18398911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 31428860 - 31428794
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||| || ||||||||||| ||||| ||||  ||||||| ||||||||||||||| ||| ||||    
T  31428860 caaaaccatcttccaatacaattttttaattcccccaaatgaagagggttttgtattacgaataaaa 31428794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 41844662 - 41844700
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  41844662 tcccctcccttcccctccaaactcccaaacaaagcctaa 41844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 48620501 - 48620547
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||||| || |||| |||| ||||||||||||||||||||||||||    
T  48620501 aagcctttccttcccctcccctccaaactcgcaaacaaagcctaagg 48620547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 54205880 - 54205822
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||| ||||||| ||| ||||||  |||||||||||| |||||| ||||||||||||    
T  54205880 tcctcctatacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaa 54205822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 56426823 - 56426920
Alignment:
Q  150 cctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||| |||| ||||||||||| |||| |||| || ||||||||| ||  ||| | |||||||||||| | | || ||||||||||||||| ||||    
T  56426823 cctccccttccatgttcctctatttcttccacttgctcattcctttttttc-aaagtcctcccctcccttcaccttcagactcgcaaacaaagcttaag 56426920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 24280132 - 24280177
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||| ||||||||||||||| || |||||| |||||||||||||||    
T  24280132 aagctttcccctcccttcccctcgaaactcccaaacaaagcctaag 24280177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 25843892 - 25843819
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||| |||||||||||||| | ||| |||| |  |||||||| || |||||||||||||| ||||| |||||||    
T  25843892 aaaatcctcctccaatacactttttgagtttccccaaatgagaagagttttgtattatgatgaaaaattaaccc 25843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 42650554 - 42650517
Alignment:
Q  206 ccttcccctcccttcccatccaaactcgcaaacaaagc 243  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  42650554 ccttcccctcgcttcccctccaaactcgcaaacaaagc 42650517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 99
Target Start/End: Complemental strand, 48620351 - 48620314
Alignment:
Q  62 ccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  48620351 ccccccaaaaccctcctccaatacaattttttagttcc 48620314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Original strand, 50494717 - 50494754
Alignment:
Q  104 aatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  50494717 aatgaggagggttttgtgttatgaagaaaacttaaccc 50494754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 21358016 - 21357976
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||||||||||| ||||||||| |||||| |||||||||    
T  21358016 tcccctcccttcccctccaaactctcaaacagagcctaagg 21357976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 133
Target Start/End: Original strand, 27485277 - 27485340
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||| |||||| | ||  ||||||  |||||||||||| |||||||||||||||||||    
T  27485277 aaaccctcctc-aatacatttttcgagttccctcaaatgaggaggattttgtattatgaagaaaa 27485340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 27485415 - 27485451
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||  ||||||||||||||||||||||    
T  27485415 tcccctcccttccactccaaactcgcaaacaaagcct 27485451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 37756747 - 37756875
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||||||| ||||| ||| ||||||  ||||||||| || |||| ||||||||  ||||  | | |||||||   |||| ||||||| | || |    
T  37756747 aaaccctcctccaacacaatttttgagttcccccaaatgagggggattttttattatgagtaaaaaattaacctccaaagccctctcctcccaatgtctt 37756846  T
Q  169 ctattttttccgcttggtcgttccttttt 197  Q
    |||||| |||| |||| || |||||||||    
T  37756847 ctatttcttccacttgctccttccttttt 37756875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 38366247 - 38366291
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||| |||||||||||||  ||||||||| ||||||||||||||    
T  38366247 aagccctcccctcccttcctctccaaactcccaaacaaagcctaa 38366291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 211 - 247
Target Start/End: Original strand, 45899511 - 45899547
Alignment:
Q  211 ccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  45899511 ccctcccttcccctccaaactcccaaacaaagcctaa 45899547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 47063735 - 47063676
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||| ||||||||||| ||||||||||  ||||||||||||||||| |||| | |||||||    
T  47063735 cctcttccaatacaattttttagttccc-caaatgaggagggttttatattttaaagaaaa 47063676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 1e-60; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 23 - 249
Target Start/End: Complemental strand, 39649664 - 39649438
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||| |||||| ||||| |||||||| | | ||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  39649664 atagattaattttgaaaaattcttattaaccctccaaaaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtat 39649565  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
     |||||||||||||||||| ||||   ||||| ||||||||||| | ||||| |||| |||| || ||||||||| || |||||||| ||||||||| ||    
T  39649564 catgaagaaaagttaaccccccaaagccctcctctcccattttcatttatttcttccacttgctcattcctttttttcccaagcctttccctcccttgcc 39649465  T
Q  223 atccaaactcgcaaacaaagcctaagg 249  Q
     ||||||||||||||||||||||||||    
T  39649464 ctccaaactcgcaaacaaagcctaagg 39649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 35683465 - 35683682
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||| ||| |||| | | ||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  35683465 attaaatttgaagaattcttattaaccctccaaaatcccccaaatctcacctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 35683564  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| || |   ||||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  || ||||||||||||||||| | |    
T  35683565 aagaaaagttaaccccccgaagccctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaaaccttcccctcccttccccttc 35683663  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  35683664 aaactcgcaaacaaagcct 35683682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 67 - 246
Target Start/End: Complemental strand, 10438035 - 10437857
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||  |||||||||||  ||||||||||| ||||||||||| ||||||||||||||| ||||   ||||||||||||||||     
T  10438035 caaaaccctcctccaatacaactttttagttcctctaaatgaggaggattttgtattataaagaaaagttaaccccccaaagacctcccctcccattttt 10437936  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
    |||||||| |||| |||| || ||||||||| || |||||||||| |||||||||| |||||||||||||||||||||||    
T  10437935 ctctatttcttccacttgctcattccttttt-tcccaagccttcctctcccttcccctccaaactcgcaaacaaagccta 10437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 5772752 - 5772928
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| |||||||||||    
T  5772752 caaaaccctcctccaatacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagttaaccc-ccaaagccctcctctcccattttc 5772850  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     ||||||| |||| |||| || || |||||| ||  |||||||||||||||||||| |||||||||  |||||||||||    
T  5772851 ttctatttcttccacttgctcatt-ctttttttcctaagccttcccctcccttcccctccaaactcttaaacaaagcct 5772928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 14570072 - 14570234
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||| |||||||| ||| |||||||||   |||||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||||||||    
T  14570072 caaaaccctactccaatataattttttagttctcccaaatgaggagggtttagtattataaagaaaagttaaccctccaaagccctcccctcccattttc 14570171  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaac 230  Q
    ||||||||  ||| ||||||| ||||||||| || ||||||||||| ||| ||||| |||||||    
T  14570172 ctctatttcgtccacttggtcattccttttt-tcccaagccttcccttccattcccctccaaac 14570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 10843100 - 10842946
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    |||||| ||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| ||||    
T  10843100 aaccccccaaaaccgtccttcaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccc-ccaaagccctcctctcc 10843002  T
Q  160 cattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||| |||| |||  |  ||||||||| |||||||||||| |||||    
T  10843001 cattttcctctatttcttccacttacttattccttttt-tctcaagccttctcctcc 10842946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 10955678 - 10955900
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||| ||||||||  |   ||||||| ||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  10955678 atagattaaatttgaagaattgatattaactctctaaaacccctcaaaatcctcctccaatacaatcttttagttcccccaaatgaggagggttttgtat 10955777  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttt--tatctcaagccttcccctcccttc 220  Q
    ||||| ||||||||||||| ||||   || | | | ||||||| |||||||| |||| |||| || ||  ||||  |   |||||||||| ||| |||||    
T  10955778 tatgatgaaaagttaaccccccaaagccccctctttccatttttctctatttcttccacttgctcattttttttccttcttcaagccttcaccttccttc 10955877  T
Q  221 ccatccaaactcgcaaacaaagc 243  Q
    || |||||||||||||| |||||    
T  10955878 ccctccaaactcgcaaataaagc 10955900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 38568365 - 38568552
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||          ||||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||||| ||||    
T  38568365 atagattaaatttgaagaattcatat----------aaaccccccaaaaccctcctccaatataattttttagttcccccaaatgaggagggtttagtat 38568454  T
Q  123 tatgaagaaaagttaaccctccaa-----tttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||||||| ||||     |  ||||||||||||||||||||||||| || | |||| || ||||||||| || |||||||||||||||    
T  38568455 tatgaagaaaagttaaccccccaaagccctcccctcccctcccattttcctctatttctttcacttgctcattccttttt-tcccaagccttcccctcc 38568552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 18675745 - 18675923
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||| |||||||| ||| ||||||||||  |||||||| ||| ||| |||||| |||||||| ||||||   |||  |||||||| ||| |||||    
T  18675745 caaaacccttctccaatataatcttttagttccc-caaatgagaaggatttagtattacgaagaaaatttaacctctcaaaatcctccccgcccgttttc 18675843  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||| |||| ||||||| ||||||||| || ||||||||| ||||||||||| ||||||||| | ||||||||||||    
T  18675844 ctctatttcttccacttggtcattccttttt-tcccaagccttcgcctcccttcccttccaaactcaccaacaaagcctaa 18675923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 24 - 168
Target Start/End: Complemental strand, 13569455 - 13569312
Alignment:
Q  24 tagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatt 123  Q
    ||||||||||||||| ||||| |||||| | | | |||| || |||||||||||||||||| ||| || |||||||| ||||||||||   |||||||||    
T  13569455 tagattaaatttgaaaaattcttattaatcctccaaaactccccaaaaccctcctccaatataattttgtagttcctccaaatgaggaaaattttgtatt 13569356  T
Q  124 atgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||||||||||| ||||   ||||| |||||||||||||    
T  13569355 atgaagaaaagttaaccc-ccaaaaccctcctctcccattttcct 13569312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 27 - 196
Target Start/End: Complemental strand, 8944134 - 8943967
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||||||||||  ||||| | |||||||| ||||||||| ||| ||||||| ||||||||||| |||||||||| ||||| ||||||||    
T  8944134 attaaatttgaagaattcatatacaccttccaaaacccca-aaaaccctcatccgatacaat-ttttagttcctccaaatgaggaaggtttagtattatg 8944037  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttt 196  Q
    || ||| ||||||||  |||    ||||||| | |||||||||||||| || | |||| || ||||||||    
T  8944036 aaaaaaggttaacccctcaaagctctccccttctattttcctctatttctttcacttgctcattcctttt 8943967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 23 - 184
Target Start/End: Complemental strand, 15974433 - 15974272
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||| |||||||| ||| |||| | | ||| ||| |||||| ||||||||  ||||| |||||||||   ||||||||||| || | ||||    
T  15974433 atagattaaatttaaagaattcgtataaaccctccaaaaacccccaaaactctcctccacaacaattttttagttctctcaaatgaggagagtatagtat 15974334  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttg 184  Q
    ||||||||||||||||||||||||   | | |||||||||||| |||||||| |||| ||||    
T  15974333 tatgaagaaaagttaaccctccaaagcctttccctcccatttttctctatttcttccacttg 15974272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 247
Target Start/End: Complemental strand, 18671079 - 18670903
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    ||||||| |||||||||||| ||||||||||| |||||||  | | ||| |||||||||||||| ||||||    |||   ||| || || |||||||||    
T  18671079 aaacccttctccaatacaattttttagttcct-caaatgaaaaagatttagtattatgaagaaacgttaacttctcaaaacccttccttcgcattttcct 18670981  T
Q  169 ctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||| |||  |||| || ||||||||| ||  |||||||||||||||||||| ||||||||| ||||||||||||||    
T  18670980 ctatttcttcgacttgatcattccttttt-tccgaagccttcccctcccttcccctccaaactcacaaacaaagcctaa 18670903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 6491272 - 6491167
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    ||||||||||||||||||||| |||| | |||||| || ||||| | |||||||||||||| ||| ||||||  |||||||||| | |||||||||||||    
T  6491272 ttaaatttgaagaattcatataaaccctccgaaacaccccaaaatcttcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatga 6491173  T
Q  128 agaaaa 133  Q
    ||||||    
T  6491172 agaaaa 6491167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 245
Target Start/End: Complemental strand, 35701145 - 35700932
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaaga 130  Q
    |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| ||||||||  |    
T  35701145 aatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttattatgagta 35701046  T
Q  131 aaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaac 230  Q
    |||  | | |||||||   |||| ||||||| | || ||||||| || | |||| || ||||||||| ||  || || ||||||||| |||| |||||||    
T  35701045 aaaaattaacctccaaagccctctcctcccaatgtcttctatttctttcacttgctccttccttttt-tccaaaaccctcccctcccctcccctccaaac 35700947  T
Q  231 tcgcaaacaaagcct 245  Q
    || ||||||||||||    
T  35700946 tcccaaacaaagcct 35700932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 35708785 - 35708962
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||||||||||||| |||||| ||||||||||  |||||||||||| |||| || | |||||||||  |||||| ||||   || | ||| ||| | ||    
T  35708785 caaaaccctcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaactaaccccccaa-agcccctccttccaatgtc 35708883  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||| |||| |||| |||  || ||||||||| |  ||| || |||||||||||||| ||||||||| ||||||||||||    
T  35708884 ctcaatttcttccacttactccttccttttttttccaaaccctcccctcccttcccctccaaactcacaaacaaagcct 35708962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 2679912 - 2680046
Alignment:
Q  81 aatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccg 180  Q
    |||||||| ||| ||| ||| ||||||| ||| |||||||||||| ||||||||||||||| ||||  || | |||||  |||||| ||||||| ||||     
T  2679912 aatacaatttttgagtcccttcaaatgatgagagttttgtattataaagaaaagttaaccccccaaagtcattccctcttattttcttctatttcttcca 2680011  T
Q  181 cttggtcgttcctttttatctcaagccttcccctcc 216  Q
    |||| |  ||||||||| ||||||| ||||||||||    
T  2680012 cttgcttattccttttt-tctcaagtcttcccctcc 2680046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 39429030 - 39428928
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| ||| ||   ||||| | ||||||||||||| |||||||| ||||||||||| |||||||||| | |||| |||| ||    
T  39429030 attaaatttgaagaattcatataaactttctcaaaccacccaaaaccctcctctaatacaattttttagttcct-caaatgaggaagattttatattttg 39428932  T
Q  127 aaga 130  Q
    ||||    
T  39428931 aaga 39428928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 9684805 - 9684879
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||| ||||||| |||| |||| |||| ||||| ||||  ||||||||||||||||||||||||||||||||    
T  9684805 aaaccccccaaaaccttccttcaatgcaattttttaattcccccaaatgaggagggttttgtattatgaagaaaa 9684879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 29709572 - 29709498
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||| |||||||| ||||||| ||||||||||| |||||||||||  |||||||||||| |||||||| |||||    
T  29709572 caaaatcctcctccgatacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaaccc 29709498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 43496895 - 43496998
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||||||||||||||||||| ||| ||||||  |||||||| || |||||||||||| ||||||| ||||||| ||||   ||||| |||||||||||||    
T  43496895 aaaccctcctccaatacaatttttaagttccc-caaatgagcagagttttgtattattaagaaaaattaaccc-ccaaagccctcctctcccattttcct 43496992  T
Q  169 ctattt 174  Q
     |||||    
T  43496993 ttattt 43496998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 6373226 - 6373123
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| || ||||||||| |||| | | ||||||| ||||||  ||||| |||||||| ||||||||||  ||||||||||||||||| |||| ||    
T  6373226 attaaatttaaaaaattcatataaaccctcccaaaccccccaaaactttcctcgaatacaattttttagttccc-caaatgaggagggttttatattttg 6373128  T
Q  127 aagaa 131  Q
    |||||    
T  6373127 aagaa 6373123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 19389850 - 19389912
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaaga 130  Q
    ||||| |||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||||    
T  19389850 caaaatcctcctccaatacaattttttagttcc-ccaaatgaggaggattttgtattatgaaga 19389912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 13569316 - 13569260
Alignment:
Q  189 ttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
    ||||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||    
T  13569316 ttccttttt-tcccaagcattcccctcccttcccctccaaactcgcaaacaaagccta 13569260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 21916348 - 21916437
Alignment:
Q  90 ttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    ||||||||||  ||||| ||||||||||||||| |||||||||| |||||||  |||  ||||||||||||| | || ||||||| ||||    
T  21916348 ttttagttcccccaaataaggagggttttgtatcatgaagaaaaattaacccctcaaagtcctcccctcccagtgtcatctatttcttcc 21916437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 27480160 - 27480261
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  ||||||  |||||||||| |||||||||| ||| ||||||  |||||||||||| |||| |||    
T  27480160 atagattgaatttgaaaaattcatataaaccctccataaccccctaaaaccctcccccaatacaatttttgagttccctcaaatgaggaggattttttat 27480259  T
Q  123 ta 124  Q
    ||    
T  27480260 ta 27480261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 248
Target Start/End: Original strand, 1935237 - 1935276
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  1935237 tcccctcccttcccctccaaactcgcaaacaaagcctaag 1935276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 141
Target Start/End: Original strand, 1977927 - 1978036
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaaga 130  Q
    |||||||||||||| ||| ||| || | || |||  ||||||||||||||| | |||| ||| ||||||   |||| ||||||||||||||||| |||||    
T  1977927 aatttgaagaattcgtataaactttccaaatcccttcaaaaccctcctccattgcaat-tttgagttcccctaaatcaggagggttttgtattacgaaga 1978025  T
Q  131 aaagttaaccc 141  Q
    ||| |||||||    
T  1978026 aaaattaaccc 1978036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 3081324 - 3081429
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| |||||||||||| |||| |   ||||||| |||||| ||| ||||||| ||| |||||||||   ||||||||||||||||| |||  ||    
T  3081324 attaaatttaaagaattcatataaaccctctcaaacccc-caaaactctcatccaatataattttttagttctatcaaatgaggagggttttatatattg 3081422  T
Q  127 aagaaaa 133  Q
    |||||||    
T  3081423 aagaaaa 3081429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 3938123 - 3938228
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||  | | |||| || ||||| ||| |||||||||||| ||||||||||   ||||||| |||||||| ||||  |    
T  3938123 attaaatttgaagaattcatataaactctcccaaactcc-caaaatcctactccaatacaattttttagttccccaaaatgagcagggttttatatttcg 3938221  T
Q  127 aagaaaa 133  Q
    |||||||    
T  3938222 aagaaaa 3938228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 9096368 - 9096294
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||| ||||||||||||||||  || ||||||  ||||| |||| | ||||||||||||||||||||| |||||    
T  9096368 caaaatcctcctccaatacaattgttgagttcccccaaattaggaagattttgtattatgaagaaaagtgaaccc 9096294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 29022706 - 29022602
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||| | |||   || ||  |||| |||||| |||||||||||||| |||||||||||  |||||||||| ||||| |||| ||    
T  29022706 attaaatttgaagaattcatttaaactcctcaaattccca-aaaaccgtcctccaatacaattttttagttcct-taaatgaggagagttttatattttg 29022609  T
Q  127 aagaaaa 133  Q
    |||||||    
T  29022608 aagaaaa 29022602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 1935099 - 1935160
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaat 88  Q
    ||||||||||||||||||| || |||| | | ||||||| |||| |||||||||||||||||    
T  1935099 attaaatttgaagaattcacataaaccctccaaaaccccccaaagccctcctccaatacaat 1935160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 9684651 - 9684606
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||| ||||||||| ||||||||| |||||||||||||||    
T  9684651 aagccttcccttcccttcccctccaaactcccaaacaaagcctaag 9684606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 10295707 - 10295752
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  10295707 aagccctcccctcccttcccctccaaactcccaaacaaagcctaag 10295752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 102 - 197
Target Start/End: Original strand, 39549961 - 39550058
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaa-ccctc-caatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||||| |||||||||||||||||||||| ||| |||| |||||  |||| |||||||||||| | |||||||||| |||  |||| || |||||||||    
T  39549961 caaataaggagggttttgtattatgaagcaaaattaatccctcaaaattccctcccctcccaatctcctctatttcttcaacttgctccttccttttt 39550058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 2021073 - 2020970
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| ||||| || ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||| |||| |||| || |||| |||    
T  2021073 atagattgaatttaaaaaattcatataaaccctccataacccctcaaaaccctcccccaatacaatttttgagttcctccaaa-gagggggattttttat 2020975  T
Q  123 tatga 127  Q
    |||||    
T  2020974 tatga 2020970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 17092990 - 17092902
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgagga 111  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| |||| |  ||||||||||    
T  17092990 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagtttccccaaatgagga 17092902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 249
Target Start/End: Complemental strand, 25598623 - 25598583
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  25598623 tcccctcccttcccctccaaactcccaaacaaagcctaagg 25598583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 41695070 - 41694966
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||| | |||| | |  || ||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  41695070 atagattgaatttgaaaaattcatttaaaccatccataatccctcaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 41694971  T
Q  123 tatga 127  Q
    |||||    
T  41694970 tatga 41694966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 38120049 - 38120010
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  38120049 tcccctcccttcccctccaaactcccaaacaaagcctaag 38120010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 39011921 - 39011830
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtttt 118  Q
    ||||||||| |||||||||||| || ||| | |||| ||  ||||||||||  ||||||||| |||||||||   ||||||||||| |||||    
T  39011921 attaaattttaagaattcatataaatcttcccaaactcccaaaaaccctccatcaatacaattttttagttctctcaaatgaggagagtttt 39011830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 207 - 241
Target Start/End: Original strand, 5089046 - 5089080
Alignment:
Q  207 cttcccctcccttcccatccaaactcgcaaacaaa 241  Q
    |||||||||| ||||||||||||||||||||||||    
T  5089046 cttcccctccattcccatccaaactcgcaaacaaa 5089080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 12150631 - 12150566
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||| |||||||||||||||| |||||||||||  |||| |||  | |||||||||||||||||||    
T  12150631 caaaatcctcctccaatacaattttttagttcct-taaattagggagattttgtattatgaagaaaa 12150566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 12229495 - 12229561
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||||| |||||||| || |||||||  ||||| ||| || ||||| |||||||||||||    
T  12229495 caaaaccctcctctaatacaattttgtagttcccccaaatcagggggattttgaattatgaagaaaa 12229561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 19338567 - 19338673
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaa-ccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||| ||||||||||||||| |||| | | ||| |||| ||||| |||||| ||||||||| ||||||||||  ||||  |  |||||||| |||| ||    
T  19338567 ttaaaattgaagaattcatataaaccctcctaaaccccctcaaaatcctccttcaatacaattttttagttccctcaaaccataagggttttatattttg 19338666  T
Q  127 aagaaaa 133  Q
    |||||||    
T  19338667 aagaaaa 19338673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 32824571 - 32824533
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  32824571 tcccctcccttctcctccaaactcgcaaacaaagcctaa 32824533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Complemental strand, 5836924 - 5836871
Alignment:
Q  80 caatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| ||| ||||||  |||||||| || ||||||||||||||||||||    
T  5836924 caatacaatttttaagttcccccaaatgagaagagttttgtattatgaagaaaa 5836871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 6491119 - 6491086
Alignment:
Q  212 cctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||||||||| ||||||||||||||||||||||    
T  6491119 cctcccttcccctccaaactcgcaaacaaagcct 6491086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 9096228 - 9096195
Alignment:
Q  211 ccctcccttcccatccaaactcgcaaacaaagcc 244  Q
    |||||||||||| |||||||||||||||||||||    
T  9096228 ccctcccttcccctccaaactcgcaaacaaagcc 9096195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 9621929 - 9621962
Alignment:
Q  23 atagattaaatttgaagaattcatattaaccttt 56  Q
    |||||||||||||||||||||||||| |||||||    
T  9621929 atagattaaatttgaagaattcatataaaccttt 9621962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 13294010 - 13294066
Alignment:
Q  71 accctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaa 128  Q
    |||||||||||||||||| ||| |||| ||  ||||||||||| ||||||||||||||    
T  13294010 accctcctccaatacaatttttaagtttctt-aaatgaggaggattttgtattatgaa 13294066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 17093126 - 17093163
Alignment:
Q  211 ccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  17093126 ccctcccttcccctccaaactcccaaacaaagcctaag 17093163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 141
Target Start/End: Complemental strand, 22103529 - 22103492
Alignment:
Q  104 aatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  22103529 aatgatgagggttttgtattatgaagaaaaattaaccc 22103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 6620461 - 6620505
Alignment:
Q  204 agccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||| || ||||||||| || ||||||||||||||||||||||    
T  6620461 agcctttccttcccttcccctcaaaactcgcaaacaaagcctaag 6620505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 131
Target Start/End: Original strand, 27350995 - 27351102
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||| ||||||   |||| ||| ||| ||| |||| | || || ||||||| | ||||||||||| | ||||||| || ||||||||    
T  27350995 atagattaaatttgaaggattcatgcaaacccttcaaaatcccccaaagctcttctacaatacatttttttagttcct-ccaatgaggcggattttgtat 27351093  T
Q  123 tatgaagaa 131  Q
    || ||||||    
T  27351094 tacgaagaa 27351102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 38928690 - 38928794
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||  ||||||| ||||||||| |||  | |  |||||| |||||||||||  ||||||||| ||| ||||||  ||||||||| || |||| |||    
T  38928690 atagattggatttgaaaaattcatataaacactccataaccccccaaaaccctcccgcaatacaatttttgagttcccccaaatgagggggattttttat 38928789  T
Q  123 tatga 127  Q
    |||||    
T  38928790 tatga 38928794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 5e-60; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 23 - 247
Target Start/End: Original strand, 38505332 - 38505545
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||          ||||||  |||||||||||||||||||||| || |||||||  |||||||||||||||||||||    
T  38505332 atagattaaatttgaagaattcatat----------aaaccctccaaaaccctcctccaatacaattttatagttcccccaaatgaggagggttttgtat 38505421  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||| ||||   ||||||||||||||||||||||||| |||| |||| || ||||||||| || |||||||||||||||||||||    
T  38505422 tatgaagaaaagttaaccccccaaagccctcccctcccattttcctctatttcttccacttgctcattccttttt-tcccaagccttcccctcccttccc 38505520  T
Q  223 atccaaactcgcaaacaaagcctaa 247  Q
     ||||||||||||||||||||||||    
T  38505521 ctccaaactcgcaaacaaagcctaa 38505545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 15748941 - 15749154
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||||||  ||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  15748941 attaaatttgaagaattcttattaaccctccaaaacccccaaaatccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatg 15749040  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||    |||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  |||||||||||||||||||| |||    
T  15749041 aagaaaagttaaccccccaaagctctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagccttcccctcccttcccctcc 15749139  T
Q  227 aaactcgcaaacaaa 241  Q
    |||||||||||||||    
T  15749140 aaactcgcaaacaaa 15749154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 16805559 - 16805776
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| |||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| ||||||| || ||||||||||||||    
T  16805559 attaaattttaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatg 16805658  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    |||||||||||| || ||||   ||||| ||||||||||||||| ||| |||| |||  |  ||||||||| || |||| |||||||||||||||| |||    
T  16805659 aagaaaagttaaacccccaaagccctcctctcccattttcctctctttcttccacttacttattccttttt-tcccaagtcttcccctcccttcccctcc 16805757  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  16805758 aaactcgcaaacaaagcct 16805776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 26 - 242
Target Start/End: Original strand, 2826238 - 2826452
Alignment:
Q  26 gattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    ||||||||||||||||||||||| || ||| | ||| ||| |||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||    
T  2826238 gattaaatttgaagaattcatataaagcttccaaaatcccccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattat 2826337  T
Q  126 gaagaaaagttaaccctccaatttcct-cccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccat 224  Q
    ||||||||||||   |||| |   ||| |  ||||||||||||||||||| |||| |||| || |||||||||  | ||||||||||||||| ||| | |    
T  2826338 gaagaaaagtta--gctcctaaagcctacatctcccattttcctctatttcttccacttgttcattccttttt-ccccaagccttcccctccattctcct 2826434  T
Q  225 ccaaactcgcaaacaaag 242  Q
    ||||||||||||||||||    
T  2826435 ccaaactcgcaaacaaag 2826452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 30081065 - 30080841
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||| |||||||||||||| |||| |   ||| | | |||||||||| | ||||||||| |||| ||| |  ||||||| |||||||||||||    
T  30081065 atagattaaatctgaagaattcatataaaccctctaaaatctcccaaaaccctctttcaatacaatttttttgtttcctcaaatgatgagggttttgtat 30080966  T
Q  123 tatgaagaaaagttaacc-ctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcc 221  Q
    |||||||||||||||||| || |||   ||||||||||||||||||||||||| |||| |||| || ||||||||| ||||||| ||||||||||||||     
T  30080965 tatgaagaaaagttaacctctgcaaac-cctcccctcccattttcctctatttcttccacttgctccttccttttt-tctcaagtcttcccctcccttct 30080868  T
Q  222 catccaaactcgcaaacaaagcctaag 248  Q
    | | |||||||||||| ||||||||||    
T  30080867 cctacaaactcgcaaataaagcctaag 30080841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 4058171 - 4058348
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||| ||||||||||| |||||||| || |||| ||||||||||||||||||||||||||||||||||| ||||   ||||  || ||||||||    
T  4058171 caaaaccctcatccaatacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcatcttccattttc 4058270  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||| |||| |||  |  ||  ||||| || |||| |||||||||||||||| ||||||||||||||||||||||    
T  4058271 ctctatttcttccacttacttatt-ttttttttcccaagtcttcccctcccttcccctccaaactcgcaaacaaagcct 4058348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 43741762 - 43741586
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||||||||| ||||||  |||||||| ||| |||||   ||||||||||| |||||||||||||||||||||||||||   |||   |||||||||    
T  43741762 aaaccccacaaaatcctcctttaatacaatttttgagttctcccaaatgaggagagttttgtattatgaagaaaagttaacca--caaaaccctcccctc 43741665  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaac 238  Q
    |||||||||||||||| || | |||| || ||||||||| ||||||||||||||||| |||||| |||||||| ||||||    
T  43741664 ccattttcctctatttctttcacttgctcattccttttt-tctcaagccttcccctcacttcccctccaaacttgcaaac 43741586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 59 - 245
Target Start/End: Complemental strand, 42254015 - 42253832
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| | ||   | ||| |||    
T  42254015 aaaccccccaaaaccctccttcaatataattttttagttcctccaaatgaggagggttttgtattatgaag-aaagttaaccc-ctaaagccttcctctc 42253918  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     ||||||||||||||| |||| |||  |  ||||||||| || |||||||| || ||||||||| |||||| |||||||||||||||    
T  42253917 tcattttcctctatttcttccacttacttattccttttt-tcccaagcctttccttcccttcccctccaaattcgcaaacaaagcct 42253832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 46442802 - 46442581
Alignment:
Q  23 atagattaaatttgaagaa-ttcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgta 121  Q
    |||||||||||||||| || || |||| |||| ||| ||| ||| |||| ||||  ||||| ||||| |||||| |||  ||||||| |||| |||||||    
T  46442802 atagattaaatttgaaaaaatttatataaacccttcaaaaaccctcaaaccccttttccaaaacaattttttagctccc-caaatgatgaggattttgta 46442704  T
Q  122 ttatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgc-ttggtcgttcctttttatctcaagccttcccctcccttc 220  Q
    |||||||||||||||||||| || |   ||||||||||||||||||||||||| | || | ||| |||||||  |||||  | |||||||||||||||||    
T  46442703 ttatgaagaaaagttaaccccccgaagccctcccctcccattttcctctatttctcccactttgctcgttcc--tttattcctagccttcccctcccttc 46442606  T
Q  221 ccatccaaactcgcaaacaaagcct 245  Q
    || ||||||||||||| ||||||||    
T  46442605 ccctccaaactcgcaaccaaagcct 46442581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 242
Target Start/End: Original strand, 45940432 - 45940606
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||   ||||  |||||||||||    
T  45940432 caaaactctactccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccctaaagccctcatctcccattttc 45940531  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaag 242  Q
     ||||||| |||| |||| || || |||||| || | |||||| ||| || || || |||||||| ||||||||||    
T  45940532 ttctatttcttccacttgttcatttcttttt-tcccgagcctttcccaccatttccctccaaacttgcaaacaaag 45940606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 27 - 242
Target Start/End: Original strand, 32650383 - 32650586
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||| |||||||  |||||||  | | ||||||| ||||| ||||||||||| |||| ||||||||||| |||||||||||||||||| || |||    
T  32650383 attaaatttaaagaattattattaactctccaaaaccccccaaaatcctcctccaatgcaattttttagttcctccaaatgaggagggttttgaataatg 32650482  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||||           | ||||||||||||||||||| |||| |||| || || |||||| || ||| | ||| |||| |||||| |||    
T  32650483 aagaaaagttaaccct-----------ctctcccattttcctctatttcttccacttgctcatt-ctttttttcccaaactttctcctctcttcccctcc 32650570  T
Q  227 aaactcgcaaacaaag 242  Q
    ||||||||||||||||    
T  32650571 aaactcgcaaacaaag 32650586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 76 - 241
Target Start/End: Complemental strand, 19791730 - 19791563
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctatttt 175  Q
    ||||||||||||| ||||||||||  ||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||||||   |||||||     
T  19791730 cctccaatacaattttttagttccc-caaatgaggtgggtttagtattatgaagaaaagttaa-cctccaaagtcctcccctcccatttgtttctatttc 19791633  T
Q  176 ttccgcttggtcgttcctttttatctcaagcct-----tcccctcccttcccatccaaactcgcaaacaaa 241  Q
    |||| |||| || ||||||||| || ||| |||     |||||||||||||| ||||||||||||||||||    
T  19791632 ttccacttgctcattccttttt-tcccaaaccttcccctcccctcccttcccctccaaactcgcaaacaaa 19791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 68 - 241
Target Start/End: Complemental strand, 34670244 - 34670072
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||||||||| |||||||| | |||  ||   |||||||||||| |||||||||||||||||||||||||||| |||  || |  |||| ||||||||    
T  34670244 aaaaccctcctctaatacaatttcttaagtcacccaaatgaggaggattttgtattatgaagaaaagttaacccttcaaagtcgtttcctctcattttcc 34670145  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaa 241  Q
    ||||||| |||  |||| |||||||||||| || ||||| ||||||| |||| || ||||||| ||||||||||    
T  34670144 tctatttcttctacttgctcgttccttttt-tcccaagcattcccctaccttaccctccaaacccgcaaacaaa 34670072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 23 - 248
Target Start/End: Original strand, 43348227 - 43348440
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||||||| | |          |||||||||||| |||||||| ||||||||||  ||||| |||||| ||| ||||    
T  43348227 atagattaaatttgaagaattcatattaaccctcc----------aaaaccctcctctaatacaattttttagttcccccaaataaggaggatttagtat 43348316  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||| |||||||||| | ||||    |||||||||||||||||||||||| || | |||| || || |||||| || |||  |||||| || ||||||    
T  43348317 tatgaaaaaaagttaactc-ccaaagctctcccctcccattttcctctatttctttcacttgatcatt-ctttttttcccaaatcttcccttctcttccc 43348414  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     | |||||| ||||||||||||||||    
T  43348415 tttcaaacttgcaaacaaagcctaag 43348440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 33872144 - 33872217
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||||||||||||||||||| | ||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  33872144 aaaaccctcctccaatacaatttgttagttcccccaaatgaggagggtttagtattatgaagaaaagttaaccc 33872217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 17818353 - 17818281
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||||||||||||||||||| |||||||||||  |||||| |||||||||||||| |||||||||||||||||    
T  17818353 aaaccctcctccaatacaattttttagttcctctaaatgatgagggttttgtattctgaagaaaagttaaccc 17818281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 6746601 - 6746778
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||| ||| ||||||||||||| ||| ||||||  ||||||||||  |||||||||||| ||||||| ||||||| ||||   |||||||||||||||||    
T  6746601 caaaccccccctccaatacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaaaattaaccccccaaagccctcccctcccattttc 6746700  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
     ||||    |||| |||| || ||||||||| ||  || || ||||||| |||||| || |||||| |||||||||||||||    
T  6746701 ttcta---cttccacttgctcattccttttt-tccaaatccctcccctcacttcccctctaaactcacaaacaaagcctaag 6746778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 42112953 - 42113069
Alignment:
Q  29 taaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaa 128  Q
    |||||||||| ||||||||| |||| | | ||||||| |||||||||  ||||||||||  ||||||||||  ||||||||||| |||| ||||||||||    
T  42112953 taaatttgaaaaattcatataaaccctcctaaaccccccaaaaccctattccaatacaactttttagttccc-caaatgaggagagtttagtattatgaa 42113051  T
Q  129 gaaaagttaaccctccaa 146  Q
    ||||| ||||||| ||||    
T  42113052 gaaaaattaaccccccaa 42113069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 102 - 245
Target Start/End: Original strand, 10592017 - 10592159
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct 201  Q
    ||||||||||   ||||||||||||||||||||||||||||| || |  || ||||| ||||||||||||||| || | |||| || ||   |||| ||     
T  10592017 caaatgaggatacttttgtattatgaagaaaagttaaccctcaaagtctct-ccctctcattttcctctatttcttacacttgatcatttagttttttcc 10592115  T
Q  202 caagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||||||||| || |||||| |||||||||| |||||||||||    
T  10592116 caagccttcccatctcttcccttccaaactcgtaaacaaagcct 10592159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 17884187 - 17884297
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | |||||  ||||| ||||||||||||||||| ||||||||||| ||||| || |  |||||||||||||    
T  17884187 attaaatttgaagaattcatataaaccgtccaaaacca-acaaagccctcctccaatacaattttttagttcct-caaataagaa--gttttgtattatg 17884282  T
Q  127 aagaaaagttaaccc 141  Q
    ||||||| |||||||    
T  17884283 aagaaaaattaaccc 17884297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 13697371 - 13697265
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||||| |||| |||| | | ||||  | || |||| || ||||||||||  ||||||||||  |||||||||||||||||||||||||    
T  13697371 attaaatttgaagaattaatataaaccctccaaaacttcccacaaccgtcttccaatacaactttttagttcccccaaatgaggagggttttgtattatg 13697272  T
Q  127 aagaaaa 133  Q
    |||||||    
T  13697271 aagaaaa 13697265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 23550873 - 23550763
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaaga 130  Q
    |||||||||||||||||| |||| ||| | ||| | ||||| ||||||||||||||| | |||||||||  |||||||  | |||||| |||||||||||    
T  23550873 aatttgaagaattcatataaacccttcaataccactcaaaatcctcctccaatacaacgctttagttcccccaaatgaaaaaggttttatattatgaaga 23550774  T
Q  131 aaagttaaccc 141  Q
    ||| |||||||    
T  23550773 aaaattaaccc 23550763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 38137986 - 38137841
Alignment:
Q  71 accctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctct 170  Q
    |||||||||||||||||  ||| || |||  |||||||||||| ||||||||||||||||||| | ||||  | ||  ||||||||||||| | |||||     
T  38137986 accctcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatgaagaaaaatgaacctcctaaagtcctcccctcccaatgtcctcc 38137887  T
Q  171 attttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    |||| |||| | || || ||||||||| ||  ||||||||||||||    
T  38137886 atttcttccacgtgctccttcctttttttccaaagccttcccctcc 38137841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 33187839 - 33187943
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||| ||||||||||||||||| |||| |   ||||||| |||||| ||||||||||||||| ||||||||||| |||||||||| | |||| |||| ||    
T  33187839 attatatttgaagaattcatataaaccctctcaaacccc-caaaactctcctccaatacaattttttagttcct-caaatgaggatgattttatattttg 33187936  T
Q  127 aagaaaa 133  Q
    |||||||    
T  33187937 aagaaaa 33187943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 35264906 - 35265083
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggag-ggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||||||||||||||||| ||||||||||  ||||||| ||| | ||||||||||| ||||||||||||||  ||||   |||| |||| |||||| |    
T  35264906 aaaccctcctccaatacaattttttagttcc-ccaaatgaagagtgtttttgtattattaagaaaagttaacc--ccaaaaccctctcctctcatttttc 35265002  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||| |  |||  |||| || ||||||||| || |||| |||||| | | |||   |||||||||||||||||||| ||||    
T  35265003 tctactccttcaacttgctcattcctttttttcccaagtcttccctttcattcatctccaaactcgcaaacaaagcttaag 35265083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 23465992 - 23466108
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||| |||||||| ||| | |||| ||| ||||||| ||||||||  |||||||||||| | | ||||||  ||||||||||||||||||||||||     
T  23465992 attaaatgtgaagaatccatgtaaacccttcaaaacccc-caaaaccc--ctccaatacaatttgtgagttccctcaaatgaggagggttttgtattata 23466088  T
Q  127 aagaaaagttaaccctccaa 146  Q
    ||||||| | ||||| ||||    
T  23466089 aagaaaaatgaaccccccaa 23466108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 1278027 - 1277802
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| |   |||||   | |||| ||| ||||||||||| ||||||||||   ||||||||| |||||| |||| ||    
T  1278027 attaaatttgaagaattcatataaaccctctcaaaccttccgaaactctcatccaatacaattttttagttccccaaaatgaggatggttttatattttg 1277928  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt------atctcaagccttcccctcccttc 220  Q
    ||||||| | | ||| ||||   || | ||||||| | ||||||||||||||| |||  || |||||||||       |||||| || || |||||||||    
T  1277927 aagaaaaataagccccccaa-agcccctcctcccaatgtcctctattttttccactttctcattccttttttttttcttctcaaaccctcacctcccttc 1277829  T
Q  221 ccatccaaactcgcaaacaaagcctaa 247  Q
    || | |||||||||||||||| |||||    
T  1277828 cccttcaaactcgcaaacaaaacctaa 1277802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 31055464 - 31055359
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaacc-ccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    ||||||||||||||||| |||| || | |   ||||| || |||||||||||||||||||||| ||||||||||  ||||||||||||||||| |||| |    
T  31055464 attaaatttgaagaatttatataaatcatctcaaacctccccaaaaccctcctccaatacaattttttagttcc-ccaaatgaggagggttttatatttt 31055366  T
Q  126 gaagaaa 132  Q
     ||||||    
T  31055365 aaagaaa 31055359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 42266995 - 42267134
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||| |||||||| |||| |   |||||   ||||||| |||||||||||||| ||| | || || |||||||  || |||||||||    
T  42266995 atagattaaatttgaagcattcatataaaccctaaaaaaccttccaaaaccttcctccaatacaatttttgaatt-ctccaaatgataagagttttgtat 42267093  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattt 164  Q
    ||||||||||| ||||| | | ||  ||||||||||||||||    
T  42267094 tatgaagaaaaattaactc-ctaaaatcctcccctcccattt 42267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 43778563 - 43778668
Alignment:
Q  23 atagattaaatttgaagaa-ttcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgta 121  Q
    ||||||| |||||||| || ||||||| |||| | |  |||||| ||||||||||| |||||||||| ||||||||||| ||||||||| |  |||| ||    
T  43778563 atagattgaatttgaaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaattttttagttccttcaaatgaggggaatttttta 43778662  T
Q  122 ttatga 127  Q
    ||||||    
T  43778663 ttatga 43778668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 105 - 248
Target Start/End: Complemental strand, 3892805 - 3892662
Alignment:
Q  105 atgaggagggttttgtattatgaagaaaagttaaccct-ccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctca 203  Q
    ||||||||||||   |||||| |||||||||||||||| |||| | |||||||||||||||| |||||||| || |  ||| || ||||||||| ||  |    
T  3892805 atgaggagggttcaatattataaagaaaagttaaccctcccaaatccctcccctcccatttttctctatttcttacatttgctcattccttttt-tccta 3892707  T
Q  204 agccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| |||||||   | |  ||||||||||||||| ||||||    
T  3892706 agccttctcctccctattcttttaaactcgcaaacaaaacctaag 3892662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 4125985 - 4125924
Alignment:
Q  78 tccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||||||||||  |||||||||  |||||||||||| ||| |||||||||||||||||||||||    
T  4125985 tccaatacaattgtttagttcc--caaatgaggaggatttagtattatgaagaaaagttaaccc 4125924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 23551696 - 23551578
Alignment:
Q  77 ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttt 176  Q
    |||||||||||  |||||||||| | |||||||||||| ||||||||||||||||||  |||||||  || | |||||||||||| | |||| ||||| |    
T  23551696 ctccaatacaaccttttagttccca-aaatgaggagggctttgtattatgaagaaaaactaaccct-taaatccctcccctcccaatgtcctttatttct 23551599  T
Q  177 tccgcttggtcgttccttttt 197  Q
    ||| |||| || || ||||||    
T  23551598 tccacttgttccttacttttt 23551578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 32820227 - 32820336
Alignment:
Q  30 aaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaag 129  Q
    ||||||||||||||||||| || | | | |||||| |||||||||| |||||||||||  ||||||||||  |||| |||||   |||||||||| ||||    
T  32820227 aaatttgaagaattcatataaatcctccaaaaccc-acaaaacccttctccaatacaactttttagttcc-ccaaacgaggataattttgtattaggaag 32820324  T
Q  130 aaaagttaaccc 141  Q
    |||| |||||||    
T  32820325 aaaaattaaccc 32820336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 33871820 - 33871773
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagga 250  Q
    |||||||||| |||| |||| |||||||||||||||||||||||||||    
T  33871820 aagccttcccttcccctcccctccaaactcgcaaacaaagcctaagga 33871773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 125
Target Start/End: Original strand, 23620781 - 23620883
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| | |||||||| ||| ||||||  ||||||||| || |||| |||    
T  23620781 atagattgaatttgaaaaattcatataaaccatccataaccccccaaaaccctccccaaatacaatttttgagttcccccaaatgagggggattttttat 23620880  T
Q  123 tat 125  Q
    |||    
T  23620881 tat 23620883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Original strand, 24924620 - 24924677
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||| |||||||| ||  ||||||| ||||||||||||||||||||||||||||||||    
T  24924620 tcctcaaatacaattttcaagttcct-caaatgaggagggttttgtattatgaagaaaa 24924677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 249
Target Start/End: Complemental strand, 30081276 - 30081234
Alignment:
Q  207 cttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    |||||||||||||||| ||||||||| ||||||||||||||||    
T  30081276 cttcccctcccttcccctccaaactcacaaacaaagcctaagg 30081234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 38233730 - 38233846
Alignment:
Q  29 taaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaa 128  Q
    |||| ||||||||||||||| || | |   ||||| | ||||| | |||| ||||||||  ||||||||||| |||||||| ||||||||||| ||| ||    
T  38233730 taaaattgaagaattcatataaatcctcgaaaacctctcaaaagcttccttcaatacaactttttagttcct-caaatgagaagggttttgtaatatcaa 38233828  T
Q  129 gaaaagttaaccctccaa 146  Q
    ||||| |||||| |||||    
T  38233829 gaaaaattaaccttccaa 38233846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 44487356 - 44487417
Alignment:
Q  74 ctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagt 135  Q
    ||||||||||||||| |||||||||||  ||||||||||  |||| |||| |||||||||||    
T  44487356 ctcctccaatacaattttttagttcctctaaatgaggagaattttatattttgaagaaaagt 44487417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 9172542 - 9172490
Alignment:
Q  81 aatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||| ||  |||||||||||||||||| | |||||||||||||||||||    
T  9172542 aatacaattttgaagttcctacaaatgaggatgattttgtattatgaagaaaa 9172490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 20513354 - 20513282
Alignment:
Q  74 ctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    ||||||||||||||| || | |||||| ||||| ||| || ||||||||||||||||||| | ||||| ||||    
T  20513354 ctcctccaatacaattttctggttcctccaaattagggggattttgtattatgaagaaaactaaaccccccaa 20513282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 21018685 - 21018792
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||| ||||||| ||||||||| ||||||   ||| | |  ||||||||| |   ||||||| ||||||||||| |||| ||||||| || |||||    
T  21018685 atagattagatttgaaaaattcatataaaccttctaaaatcacctaaaaccctcat---atacaattttttagttcctccaaacgaggaggattctgtat 21018781  T
Q  123 tatgaagaaaa 133  Q
    |||||||||||    
T  21018782 tatgaagaaaa 21018792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 28437530 - 28437634
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| |||| |||| |||| | |  |||||| ||||| || ||||||||||||| ||| ||||||  ||||||||| || |||| |||    
T  28437530 atagattgaatttgaaaaattgatataaaccctccataaccccccaaaatccacctccaatacaatttttgagttcccccaaatgagggggattttttat 28437629  T
Q  123 tatga 127  Q
    |||||    
T  28437630 tatga 28437634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 30301962 - 30302021
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||| |||||||| || ||||||||||| ||||| |||| |||||||||    
T  30301962 cctcctccaatacaattttttagtttct-caaatgaggagagttttatattttgaagaaaa 30302021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 34651913 - 34651869
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||    
T  34651913 aagccatcccctcccttcccctccaaactcccaaacaaagcctaa 34651869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 4788034 - 4788099
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| |||||||||||| ||||||||||  ||||| |||| | |||| ||||||||||||||    
T  4788034 caaaaccctactccaatacaattttttagttcc-ccaaataaggatgattttatattatgaagaaaa 4788099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 7667024 - 7666982
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  7667024 aagccctcccctcccttcccctccaaactcccaaacaaagcct 7666982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 14676270 - 14676205
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||| |||||||| |||||| ||| |||||| ||||||||||||| ||| ||||||| |||||||    
T  14676270 caaaactctcctcca-tacaatttttgagttcccacaaatgaggaggatttagtattataaagaaaa 14676205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 28437401 - 28437359
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  28437401 aagccctcccctcccttcccctccaaactctcaaacaaagcct 28437359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 31179999 - 31180063
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||| ||||||||||||||| |||||| |||| ||||||||||| ||||| |||| |||||||||    
T  31179999 caaaactctcctccaatacaattttttag-tcct-caaatgaggagagttttatattttgaagaaaa 31180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 33872221 - 33872263
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||    
T  33872221 aagccctcccctcccctcccctccaaactcgcaaacaaagcct 33872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 43189078 - 43189120
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| ||| |||||||||||||||||||| ||||||||||||    
T  43189078 aagccctcctctcccttcccatccaaactcccaaacaaagcct 43189120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 75 - 141
Target Start/End: Complemental strand, 43741388 - 43741322
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    |||||||||||||  |||||||| |  ||||||| || |||||||||||||||| |||| |||||||    
T  43741388 tcctccaatacaactttttagttaccccaaatgatgaaggttttgtattatgaaaaaaaattaaccc 43741322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 425420 - 425319
Alignment:
Q  34 ttgaagaattcatattaacctttc-gaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggaggg-ttttgtattatgaagaa 131  Q
    |||||||||||||||||||| | |  ||||||  |||||  ||||||||||||| | ||| ||||||  ||||| ||| ||| |||||||||||||||||    
T  425420 ttgaagaattcatattaaccctccaaaaacccttcaaaattctcctccaatacactttttgagttcccccaaattaggggggtttttgtattatgaagaa 425321  T
Q  132 aa 133  Q
    ||    
T  425320 aa 425319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 41471497 - 41471405
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctccc 160  Q
    ||||||||||||||  | |||| ||| ||||||  |||||||||||| ||||||||| | ||||||| | ||||| ||||  ||||||||||||    
T  41471497 caaaaccctcctccg-tgcaatttttcagttcccccaaatgaggaggattttgtattcttaagaaaaatgaaccccccaaagtcctcccctccc 41471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 230
Target Start/End: Original strand, 46745625 - 46745780
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctat 172  Q
    |||||||||||||||| ||| ||||||  ||||||||  || ||||| |||||||| ||||  | | || ||||  |||||||||| || | || |||||    
T  46745625 cctcctccaatacaatttttgagttcccccaaatgagagggattttgcattatgaataaaaaatcatcccccaaagtcctcccctctca-tgtcttctat 46745723  T
Q  173 tttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaac 230  Q
    ||||||| |||| || ||||||||| ||  || || ||||||||| |||| |||||||    
T  46745724 tttttccacttgctccttccttttt-tccaaaaccctcccctcccctcccctccaaac 46745780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 249
Target Start/End: Original strand, 7667338 - 7667378
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||||||| |||| ||||||||| ||||||||||||||||    
T  7667338 tcccctcccctcccctccaaactcccaaacaaagcctaagg 7667378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 85 - 133
Target Start/End: Complemental strand, 9153128 - 9153080
Alignment:
Q  85 caatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||| ||| ||||||||||||| |||| | |||||||||||||||||||    
T  9153128 caatttttaagttcctacaaattaggatgattttgtattatgaagaaaa 9153080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 16805414 - 16805378
Alignment:
Q  216 ccttcccatccaaactcgcaaacaaagcctaaggaat 252  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  16805414 ccttcccctccaaactcccaaacaaagcctaaggaat 16805378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 241
Target Start/End: Complemental strand, 33406446 - 33406414
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaa 241  Q
    |||||||||||||||||||||||| ||||||||    
T  33406446 tcccctcccttcccatccaaactcccaaacaaa 33406414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Original strand, 38236019 - 38236055
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  38236019 tcccctcccttcccctccaaactcccaaacaaagcct 38236055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 41471413 - 41471377
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||| | ||||||||||||||||||||||    
T  41471413 tcccctcccttctcctccaaactcgcaaacaaagcct 41471377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 42854162 - 42854118
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||| |||||||||||||| |||||| || ||||||||||||||    
T  42854162 aagccctcccctcccttcccctccaaattcacaaacaaagcctaa 42854118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 8e-59; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 3537299 - 3537083
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||||||||||||| | ||| |  ||||||| |||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  3537299 atagattaaatttgaagaattcatat-accctctaaaaacccc-caaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtat 3537202  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||||||||  ||||   ||||||||||||||||||||||||| |||| |||  || ||||||||| ||| ||||||||||||||||||||    
T  3537201 tatgaagaaaagttaacctcccaaagccctcccctcccattttcctctatttcttccacttactcattccttttt-tctaaagccttcccctcccttccc 3537103  T
Q  223 atccaaactcgcaaacaaag 242  Q
     |||||||||||||||||||    
T  3537102 ctccaaactcgcaaacaaag 3537083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 216
Target Start/End: Original strand, 33944632 - 33944819
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  33944632 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 33944731  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||| ||||   ||||| ||||||||||||||||||| |||| |||  |  ||||||||| || |||||||||||||||    
T  33944732 aagaaaagttaaccc-ccaaagccctcctctcccattttcctctatttcttccacttacttattccttttt-tcccaagccttcccctcc 33944819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 60 - 247
Target Start/End: Original strand, 25754127 - 25754311
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    |||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||  ||||   ||||| ||||    
T  25754127 aaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtcaacc--ccaaagccctcctctcc 25754224  T
Q  160 cattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||| |||||||||| || | |||  |  ||||||||| || |||| |||||||||||||| ||||||||||||||||||||||||||    
T  25754225 cattatcctctatttctttcacttacttattcctttttttc-caagacttcccctcccttctcatccaaactcgcaaacaaagcctaa 25754311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 27 - 248
Target Start/End: Original strand, 517624 - 517841
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||| ||| |||| | | ||||||| |||||||||||| ||||||||| ||| ||||||  |||||||||||||||||||||||||    
T  517624 attaaatttgaaaaattcttatgaaccctccaaaaccccccaaaaccctccttcaatacaat-tttgagttcccccaaatgaggagggttttgtattatg 517722  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||| ||||||  ||||   ||| | |||| |||||||||||||| |||| |||| |   ||||||||  | |||||||| |||||||||||| |||    
T  517723 aagaaaaattaacc--ccaaagcccttctctcctattttcctctatttcttccacttgcttagtcctttttcac-caagcctttccctcccttcccctcc 517819  T
Q  227 aaactcgcaaacaaagcctaag 248  Q
    ||||||||||||||||||||||    
T  517820 aaactcgcaaacaaagcctaag 517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 27197350 - 27197131
Alignment:
Q  18 ataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgtttt-agttcctacaaatgaggagggtt 116  Q
    |||| ||| |||||||||||||||||||||| |||| |   |||  || |||||||||| ||||||||||| |||| ||||||| |||||||||||||||    
T  27197350 ataacataaattaaatttgaagaattcatataaaccctcaaaaaaaccccaaaaccctcatccaatacaatttttttagttcct-caaatgaggagggtt 27197252  T
Q  117 ttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||| ||||||||| ||||   |||||||||||||||||||||||||||||| |||| || ||| ||||| || ||   ||||||||||    
T  27197251 ttgtattatgaagaatagttaaccc-ccaaaaccctcccctcccattttcctctattttttccccttgctcattcattttt-tcccagatcttcccctcc 27197154  T
Q  217 cttcccatccaaactcgcaaaca 239  Q
    |||||| |||||| | |||||||    
T  27197153 cttcccctccaaatttgcaaaca 27197131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 27 - 248
Target Start/End: Complemental strand, 29623325 - 29623105
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | ||||||| |||||||||||| ||||||||  ||| |||| |  |||||||||||||||||||||||||    
T  29623325 attaaatttgaagaattcatataaaccctcctaaacccctcaaaaccctcctgcaatacaacttttgagtttc-ccaaatgaggagggttttgtattatg 29623227  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctc-aagccttcccctcccttcccatc 225  Q
    ||||||| |||||| | |||   |||||||||| | | |||||||||| |||| |||| || ||||||||| |||| || || ||||||| |||||| ||    
T  29623226 aagaaaaattaaccat-caaagccctcccctcctaatgtcctctatttcttccacttgctccttcctttttttctcaaaaccctcccctctcttcccctc 29623128  T
Q  226 caaactcgcaaacaaagcctaag 248  Q
     ||||||||||||||||||||||    
T  29623127 taaactcgcaaacaaagcctaag 29623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 60 - 245
Target Start/End: Original strand, 48908899 - 48909082
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    |||||| |||||||||||||||||| ||| ||||||||||| ||||| | |||||||||||||||||||||||||||||||| ||||   | ||| ||||    
T  48908899 aaccccccaaaaccctcctccaatataattttttagttcctccaaattatgagggttttgtattatgaagaaaagttaaccc-ccaaagccttcctctcc 48908997  T
Q  160 cattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||||||||||||| |||| |||  |  ||| ||||| || |||| |||||||||||||||| |||||||| |||||||||||||    
T  48908998 cattttcctctatttcttccacttacttattcttttttttc-caagtcttcccctcccttcccctccaaacttgcaaacaaagcct 48909082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 68 - 248
Target Start/End: Complemental strand, 50948254 - 50948074
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctcc-aatttcctcccctcccattttc 166  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||   ||||| |||||||||||    
T  50948254 aaaaccctcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaagccctcctctcccattttc 50948155  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
     ||||||| |||| | || || ||||||||| ||  || ||||||||||| ||  | ||||||| |||||||||||||||||    
T  50948154 ttctatttcttccacatgctcattccttttt-tcctaaaccttcccctcctttttcttccaaacacgcaaacaaagcctaag 50948074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 68 - 216
Target Start/End: Original strand, 53664632 - 53664779
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||  |||||| ||| |||||||     
T  53664632 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccctcaaagtcctcctctctcattttct 53664731  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||| |||| |||| || ||||||||| ||  ||||||||||||||    
T  53664732 tctatttcttccacttgctcattccttttt-tcctaagccttcccctcc 53664779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 23 - 245
Target Start/End: Complemental strand, 49183778 - 49183564
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||          ||||||  ||||||||||||| |||||||| ||||||||| | ||||||||||||| || ||||    
T  49183778 atagattaaatttgaagaattcatat----------aaaccctccaaaaccctcctctaatacaattttttagttc-tccaaatgaggagggattagtat 49183690  T
Q  123 tatgaagaaaagttaaccctccaat----ttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctccct 218  Q
    ||||||||||||||||||| ||||     | |||||||||||||||| |||||||| |||| |||| || ||||||||| || ||| ||||||||||| |    
T  49183689 tatgaagaaaagttaaccccccaaagccctccctcccctcccatttttctctatttcttccacttgctcattccttttt-tcccaaaccttcccctccat 49183591  T
Q  219 tcccatccaaactcgcaaacaaagcct 245  Q
    |||| ||||||||| ||||||||||||    
T  49183590 tcccctccaaactcacaaacaaagcct 49183564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 5939769 - 5939961
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| ||||| || ||||| | | |||| || |||||||||||||||||||| | || |||||||| |||||||||| | ||||||||    
T  5939769 atagattaaatttgaaaaattcttactaaccctccaaaacgccccaaaaccctcctccaatacagttttgtagttcctccaaatgaggaagattttgtat 5939868  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    ||||||||||||||||||| ||||   | ||  ||||||||||||||||||| |||| |||| || ||||||||| || |||| ||||||||||    
T  5939869 tatgaagaaaagttaaccccccaaaaccttcatctcccattttcctctatttcttccacttgctcattccttttt-tcccaagtcttcccctcc 5939961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 38639638 - 38639490
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   | ||| |||||||||||    
T  38639638 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaaaccttcctctcccattttc 38639539  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    |||||||| |||| |||  |  || |||||| || |||||||||||||||    
T  38639538 ctctatttcttccacttacttatt-ctttttttcccaagccttcccctcc 38639490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 37674181 - 37674320
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctatttt 175  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||| ||||   ||||| ||||||||||||| |||||     
T  37674181 cctccaatacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctcccattttcctttatttc 37674280  T
Q  176 ttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
    |||| |||| |||||||||||| || |||||||||||||||    
T  37674281 ttccacttgctcgttccttttt-tcccaagccttcccctcc 37674320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 27 - 245
Target Start/End: Complemental strand, 35283176 - 35282961
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||| |||||||||||||| |||| | | ||||||| ||||||| |||||||||||||| ||||||||||  ||||||||||||||||| |||| ||    
T  35283176 attaaatatgaagaattcatataaaccctcccaaacccctcaaaaccttcctccaatacaattttttagttcccccaaatgaggagggttttatattttg 35283077  T
Q  127 aagaaaagttaaccctcc-aatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatc 225  Q
    ||||||| ||||||| || ||  ||||  ||||||| |   |||||||| |||| |||| || ||||||||||   ||| || |||||| ||||||| ||    
T  35283076 aagaaaaattaaccccccaaagctcct--cctcccaatgatctctatttcttccacttgctccttccttttta--ccaaaccctccccttccttcccctc 35282981  T
Q  226 caaactcgcaaacaaagcct 245  Q
    ||||||||||||||||||||    
T  35282980 caaactcgcaaacaaagcct 35282961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 60 - 216
Target Start/End: Complemental strand, 44400765 - 44400609
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    ||||| ||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||||| |||||||||||||||||| ||||   ||||| ||||    
T  44400765 aaccctacaaaaccctcctccaatacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaaagttaaccc-ccaaagccctcctctcc 44400667  T
Q  160 cattttcctctattttttccgcttggtcgttcc-tttttatctcaagccttcccctcc 216  Q
    ||||||||| ||||| |||| |||| || |||| ||||| || |||||||||||||||    
T  44400666 cattttcctttatttcttccacttgctcattccttttttttcccaagccttcccctcc 44400609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 59 - 197
Target Start/End: Original strand, 33908973 - 33909110
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| |||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||||||||||||||||| || ||||   ||| || ||    
T  33908973 aaaccccccaaaaccctcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaagttaatcccccaaagccct-ccttc 33909071  T
Q  159 ccattttcctctattttttccgcttggtcgttccttttt 197  Q
    |||||||||||||||| |||| |||| || |||||||||    
T  33909072 ccattttcctctatttcttccacttgctcattccttttt 33909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 32858923 - 32858700
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||| |||||||| | |||| | | ||||||| |||||| |||||| |||||||| ||| ||||||  |||||||||||| |||| |||    
T  32858923 atagattaaatttgatgaattcatgtaaaccctccaaaaccccccaaaactctcctcgaatacaatttttgagttcccccaaatgaggaggattttatat 32858824  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcc-tttttatctcaagccttcccctcccttcc 221  Q
    ||||||||||| | ||||| ||||   | | ||||| || | || ||||||| |||| |||| || |||| ||||| ||  || || |||||| ||||||    
T  32858823 tatgaagaaaaatgaaccc-ccaaagcctttccctctcaatgtcatctatttcttccacttgctcattccttttttttccaaacccctccccttccttcc 32858725  T
Q  222 catccaaactcgcaaacaaagccta 246  Q
    | |||||||||||||||||||||||    
T  32858724 cctccaaactcgcaaacaaagccta 32858700  T

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Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 27 - 139
Target Start/End: Complemental strand, 51686595 - 51686484
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||||||| |||| | | |||||||  ||||||||||||||||||||| ||||||||||  ||||||||| |||||| ||||||||    
T  51686595 attaaatttgaaaaattcatataaaccctccaaaacccccaaaaaccctcctccaatacaattttttagttcc-ccaaatgaggggggtttagtattatg 51686497  T
Q  127 aagaaaagttaac 139  Q
    |||||||||||||    
T  51686496 aagaaaagttaac 51686484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 53888576 - 53888470
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | ||||||| |||||||||||||||||||||| ||||||||||  ||||  ||||||||||| |||| ||    
T  53888576 attaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaatacaattttttagttcccccaaacaaggagggttttatattttg 53888477  T
Q  127 aagaaaa 133  Q
    |||||||    
T  53888476 aagaaaa 53888470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 179
Target Start/End: Original strand, 45570935 - 45571087
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||| ||||| ||||||||| |||| ||  || ||||  |||| |||||||||||||||| ||||||||||  ||||||||||||||||  |||||||    
T  45570935 attaaacttgaataattcatataaaccctttaaaccccccaaaaatcctcctccaatacaattttttagttcccccaaatgaggagggtttaatattatg 45571034  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttcc 179  Q
    ||||||| | ||||| |||    |||||||| |||||||||||||||| ||||    
T  45571035 aagaaaaatgaaccccccatagccctccccttccattttcctctatttcttcc 45571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 1339881 - 1340004
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| |||||||||||||||||||||||| | || | ||| ||||||  ||||||| || ||||||||||| ||| ||||||| ||||||| ||| |||    
T  1339881 aataaaatagattaaatttgaagaattcatgtaaatccttc-aaaccctccaaaaccttcttccaatacaatttttgagttccttcaaatgatgagagtt 1339979  T
Q  117 ttgtattatgaagaaaagttaaccc 141  Q
     |||||||||||||||| |||||||    
T  1339980 atgtattatgaagaaaaattaaccc 1340004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 248
Target Start/End: Original strand, 50535135 - 50535314
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||| ||| |||||||||||| ||||||||||   ||||||||||||||| ||||||||||| |||||||||||  |||   | | || |  ||||||||    
T  50535135 aaaatccttctccaatacaattttttagttcccctaaatgaggagggtttagtattatgaagtaaagttaacccctcaaagcctttccttttcattttcc 50535234  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| |||   ||| || ||||||||| ||||| | |||| ||||||||||| | ||||||||||||||||| |||||    
T  50535235 tctatttcttctatttgctcattccttttt-tctcatgtcttctcctcccttccccttcaaactcgcaaacaaagtctaag 50535314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 241
Target Start/End: Original strand, 15499287 - 15499503
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||| |||| || | |||| ||| ||||||  ||||| | |||||||||||||| ||| |||||   |||||||||| | ||||||||    
T  15499287 atagattaaatttgaaaaatttatgtaaacccttcaaaaccctccaaaatcatcctccaatacaatttttgagttctcccaaatgaggaagattttgtat 15499386  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    ||||||||||||| ||||  ||||   | ||||||  || | |  ||||||| |||| |||| |||||| ||||| ||  || ||| || ||| ||||||    
T  15499387 tatgaagaaaagtgaacc--ccaaagccttcccctttcaatgtaatctatttcttccacttgctcgttcttttttttccaaaccctaccactctcttccc 15499484  T
Q  223 atccaaactcgcaaacaaa 241  Q
    |||||||||||||||||||    
T  15499485 atccaaactcgcaaacaaa 15499503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 51684590 - 51684494
Alignment:
Q  150 cctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||||||| ||||||||||||||| |||| |||| || ||||||||| || |||| ||||||||| |||||| |||||||||||||| |||||||||    
T  51684590 cctcccctctcattttcctctatttcttccacttgttcattccttttt-tcccaagtcttcccctctcttcccctccaaactcgcaaataaagcctaa 51684494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 68 - 248
Target Start/End: Original strand, 41099760 - 41099938
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||| |||||||||||||| |||||||||   ||||| |||||||||||||||| |||||||||||||||||   ||  |||||||||  |||||||     
T  41099760 aaaaccttcctccaatacaat-ttttagttctcccaaataaggagggttttgtattgtgaagaaaagttaaccccttaaagtcctcccctttcattttct 41099858  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||  || | |||   | ||||||||| | |||||| ||||||||  ||||| | |||||||||||||||| ||||||    
T  41099859 tctattactttcacttacacattccttttt-tttcaagcattcccctctattccccttcaaactcgcaaacaaaacctaag 41099938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 1132957 - 1133135
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||| ||||||   |||||||||| |||||||||||||||| ||| | ||||| ||||   | ||||||| || | ||    
T  1132957 caaaaccctcctccaatacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaaaatgaaccc-ccaaaaccttcccctctcaatgtc 1133055  T
Q  167 ctctattttttccgcttggtcgttcc-tttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
     |||||||  ||| |||| || |||| ||||| ||  || || |||||||||||||| | ||||||||||||||||||||    
T  1133056 atctatttcgtccacttgctcattccttttttttccaaacccctcccctcccttcccctacaaactcgcaaacaaagcct 1133135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 250
Target Start/End: Original strand, 47789434 - 47789660
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  || |||||| |  |||| |||    
T  47789434 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccagatgaggggatttttttat 47789533  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||| | | |||||||    ||| |||| || | || ||||||| |||| |||| || ||||||||| |||  | || ||||||||||||||    
T  47789534 tatgagtaaaagattaacctccaaagctctctcctctcaatgtcttctatttcttccacttgctccttccttttt-tctacaaccctcccctcccttccc 47789632  T
Q  223 atccaaactcgcaaacaaagcctaagga 250  Q
     ||||||||| |||||||||||| ||||    
T  47789633 ctccaaactcccaaacaaagccttagga 47789660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 76 - 161
Target Start/End: Original strand, 40118925 - 40119010
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctccca 161  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||| | |||||||||| ||||||| ||||   ||||||||||||    
T  40118925 cctccaatacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaaaattaaccccccaaagccctcccctccca 40119010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 49682987 - 49683163
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||| |||||||| |||||||||||||| | |  |||| | ||||||||||| |||||||||| ||| ||||||  ||||||||| || ||||     
T  49682987 aagatagattgaatttgaaaaattcatattaaccctccataacctcccaaaaccctcc-ccaatacaatttttgagttcccccaaatgagggggattttt 49683085  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||||||||  ||||  | | |||||||   |||| ||||| | | || |||||||||||| |||| || |||||||||    
T  49683086 tattatgagtaaaaaattaacctccaaagccctctcctcctaatgtcttctattttttccacttgctcattccttttt 49683163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 31651437 - 31651545
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||| |||||||||||| |||||| ||| |||||||  ||||  ||| ||||||||||| ||| ||||     ||||||||||| ||||||||||||    
T  31651437 attaaatgtgaagaattcattttaacccttcaaaaccccctaaaattctcatccaatacaatttttaagttttccaaaatgaggaggattttgtattatg 31651536  T
Q  127 aagaaaagt 135  Q
    |||||||||    
T  31651537 aagaaaagt 31651545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 41961965 - 41962065
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| |||  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  41961965 atagattgaatttgaaaaattcatataaacccttcataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 41962064  T
Q  123 t 123  Q
    |    
T  41962065 t 41962065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 251
Target Start/End: Original strand, 30131871 - 30132100
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||| |||||||| ||||||||| |||| |  | |||||| ||||||||||| |||||||||| ||| |||| |  || ||||||    ||||     
T  30131871 aagatagattgaatttgaaaaattcatataaaccctctgtaaccccccaaaaccctcccccaatacaatttttgagtttccccagatgagggaaattttt 30131970  T
Q  120 tattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctccctt 219  Q
    ||||||||  ||||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| || ||||||||| ||  || || ||||||||| |    
T  30131971 tattatgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttt-tc-gaaaccctcccctcccct 30132068  T
Q  220 cccatccaaactcgcaaacaaagcctaaggaa 251  Q
    ||| |||||| || ||||||||||||||||||    
T  30132069 cccctccaaattcccaaacaaagcctaaggaa 30132100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 179
Target Start/End: Complemental strand, 22225405 - 22225304
Alignment:
Q  77 ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttt 176  Q
    |||||||| ||| ||||||||||   |||||||||| |||| ||||||||||||||| ||||||||| ||  | ||| ||||| |||||||||||||| |    
T  22225405 ctccaatataattttttagttcccctaaatgaggagagtttagtattatgaagaaaaattaaccctcaaagct-ctctcctcctattttcctctatttgt 22225307  T
Q  177 tcc 179  Q
    |||    
T  22225306 tcc 22225304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 23 - 197
Target Start/End: Original strand, 24242080 - 24242254
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| ||| |||| ||||||||| |||| | |  |||||  ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  24242080 atagattgaatatgaaaaattcatataaaccctccataacccaccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 24242179  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    |||||  ||||  | | |||||||  ||||| ||||||| | || ||||||| |||| |||| || |||||||||    
T  24242180 tatgagtaaaaaattaacctccaaagtcctctcctcccaatatcttctatttcttccacttgctccttccttttt 24242254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 24588315 - 24588381
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||| ||| |||||||||| ||| ||||||| ||||||||| || |||||||||||||||||||    
T  24588315 caaaaccatcccccaatacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaa 24588381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 33281730 - 33281804
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||| ||||| |||| ||||||||||| ||| |||||||| ||||||||||| |||| ||||||||| ||||    
T  33281730 aaacccctcaaaatcctcttccaatacaatttttgagttcctataaatgaggaggattttatattatgaaaaaaa 33281804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 3537427 - 3537472
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||    
T  3537427 aagccttcccctcccttcccctccaaactcccaaacaaagcctaag 3537472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 21777621 - 21777734
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttg 119  Q
    |||||||||| | |||||||||||||| | |||| | | |||||   |||||| ||||||||||||||| ||| | |||   ||||||| ||| ||||||    
T  21777621 aagatagattgattttgaagaattcatgtgaaccctccaaaaccttccaaaactctcctccaatacaatttttgatttctcccaaatgatgagagttttg 21777720  T
Q  120 tattatgaagaaaa 133  Q
    ||||||||||||||    
T  21777721 tattatgaagaaaa 21777734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 19793445 - 19793561
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggtt 116  Q
    ||||| ||||||||||||||||||| | |||  |||| | | ||||| | |||||||||| | ||||| ||  ||||||||||| ||| ||||||| |||    
T  19793445 aataacatagattaaatttgaagaacttatacaaaccctccaaaacctctcaaaaccctcattcaatataagtttttagttcctccaactgaggagagtt 19793544  T
Q  117 ttgtattatgaagaaaa 133  Q
    | |||||| ||||||||    
T  19793545 tcgtattaagaagaaaa 19793561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 141
Target Start/End: Complemental strand, 47359402 - 47359294
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgtttt-agttcctacaaatgaggagggttttgta 121  Q
    ||||||||||||||||||||||||||          ||||||  ||||||||||||||| |||||| |||| |||| |  |||| ||||||||||| |||    
T  47359402 atagattaaatttgaagaattcatat----------aaaccctccaaaaccctcctccactacaatttttttagtttcc-caaacgaggagggtttagta 47359314  T
Q  122 ttatgaagaaaagttaaccc 141  Q
    ||||||||||||||||||||    
T  47359313 ttatgaagaaaagttaaccc 47359294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 3043114 - 3043280
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaaga 130  Q
    |||||||| ||||||||| |||| | || |||| | ||||||||||| |||||||||| ||| ||||||  ||||| ||| || |||| ||||||||  |    
T  3043114 aatttgaaaaattcatataaaccatccgtaacctcccaaaaccctcccccaatacaatttttgagttcccccaaatcagggggattttttattatgagta 3043213  T
Q  131 aaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    |||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| || |||||||||    
T  3043214 aaaaattaacctccaaaggcctctcctcccaatgtcttctatttcttccacttgctccttccttttt 3043280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 39499419 - 39499465
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  39499419 aagccctcccctcccttcccctccaaactcccaaacaaagcctaagg 39499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 47789306 - 47789260
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  47789306 aagccctcccctcccttcccctccaaactcccaaacaaagcctaagg 47789260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 48444594 - 48444490
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||| |||||||||| |||| | | | || || |||||||||| ||||||||||| |||||| |||  |||||||||| |||||| |||| ||    
T  48444594 attaaatttgaggaattcatataaaccctcccagacacc-caaaaccctcatccaatacaattttttagatcc-ccaaatgaggaaggttttatattttg 48444497  T
Q  127 aagaaaa 133  Q
    |||||||    
T  48444496 aagaaaa 48444490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 53620240 - 53620159
Alignment:
Q  165 tcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||| | || |||| || ||||||||| ||  ||||| || ||||||||||| ||||||||||||||||||||||||    
T  53620240 tcctctatttctcccacttgctccttccttttt-tccaaagccctcacctcccttcccctccaaactcgcaaacaaagcctaa 53620159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 7435656 - 7435716
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagtta 137  Q
    ||||||||||||| ||||||||| | || ||||||||| |||| ||||||||||||||||||    
T  7435656 cctccaatacaattttttagttc-tccagatgaggaggattttatattatgaagaaaagtta 7435716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 11500144 - 11500087
Alignment:
Q  76 cctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||||||| ||||||||    ||||||||||||||||| ||||||||||||||    
T  11500144 cctccaatacaattttttagttatcccaaatgaggagggttttctattatgaagaaaa 11500087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 27681864 - 27681791
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||| ||||||| ||| |||||||||  ||||||||||| ||||||| ||||||||| |||| | |||||||    
T  27681864 aaccccccaaaaccttccaccaatacaactttttagttcctccaaatgacgagggttttatatttttaagaaaa 27681791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 45555731 - 45555622
Alignment:
Q  18 ataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttt 117  Q
    |||| ||||||| |||||||| ||||||||| |||| | |  | |||| |||||||||||  ||||||||| ||| ||||||  ||||||||| || |||    
T  45555731 ataacatagattgaatttgaaaaattcatataaaccctccatagccccccaaaaccctcccacaatacaatttttgagttcccccaaatgagggggattt 45555632  T
Q  118 tgtattatga 127  Q
    | ||||||||    
T  45555631 tttattatga 45555622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 52620850 - 52620915
Alignment:
Q  60 aaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    |||||| |||||||||||||||||||||| ||| |||||   |||||||||||| ||| |||||||    
T  52620850 aacccctcaaaaccctcctccaatacaatttttgagttctcccaaatgaggaggatttggtattat 52620915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 35989165 - 35989094
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaac 139  Q
    |||||| |||||| |||||||| ||||||||||  ||||| ||||||||||  |||||||||||| |||||||    
T  35989165 caaaactctcctctaatacaattttttagttccc-caaattaggagggtttaatattatgaagaatagttaac 35989094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 36637704 - 36637668
Alignment:
Q  214 tcccttcccatccaaactcgcaaacaaagcctaagga 250  Q
    ||||||||||||||||||||||||||||| |||||||    
T  36637704 tcccttcccatccaaactcgcaaacaaagtctaagga 36637668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 44412143 - 44412246
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| ||||| || ||||||||| |||||| |  |||||| |||||||||||  ||||||||| ||| |||||| | |||||||| || |||| |||    
T  44412143 atagattgaatttaaaaaattcatataaaccttccataaccccccaaaaccctccctcaatacaatttttgagttccca-aaatgagggggattttttat 44412241  T
Q  123 tatga 127  Q
    |||||    
T  44412242 tatga 44412246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 248
Target Start/End: Complemental strand, 2927769 - 2927730
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||||| | |||||||||||||||||||||||    
T  2927769 tcccctcccttcccctgcaaactcgcaaacaaagcctaag 2927730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 19148256 - 19148197
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaataca 86  Q
    ||||||||||||| |||||||| |||| | | ||||||| |||||| |||||||||||||    
T  19148256 attaaatttgaagcattcatataaaccctcccaaacccctcaaaactctcctccaataca 19148197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 43263764 - 43263697
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccct 142  Q
    |||||||||||||| ||| ||||||| |||||    |||||||||||||||||||||||  |||||||    
T  43263764 tcctccaatacaatttttgagttccttcaaattctaagggttttgtattatgaagaaaaaataaccct 43263697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 36637889 - 36637783
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| ||  || | |||| ||| |||||||||||| |||||||| |  ||||| |  ||||||| |||  |||| |||| ||    
T  36637889 attaaatttgaagaattcatataaattttcccaaacaccataaaaccctcctctaatacaatttcgtagtttccccaaatgacgagaattttatattttg 36637790  T
Q  127 aagaaaa 133  Q
    |||||||    
T  36637789 aagaaaa 36637783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 38456523 - 38456485
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  38456523 tcccctcccttcccctccaaactcccaaacaaagcctaa 38456485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Complemental strand, 44412014 - 44411972
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  44412014 aagccctcccctcccttcccctccaaactcccaaacaaagcct 44411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 47714661 - 47714885
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||  ||||||||||| |||||||||| ||| ||||||  |||||||||  | |||| |||    
T  47714661 atagattgaatttgaaaaattcatataaaccctccataaccctccaaaaccctcccccaatacaatttttgagttcc-ccaaatgagggagattttttat 47714759  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaa-----gccttcccctccc 217  Q
    |||||  ||||  | | |||||||   |||| ||| ||| | || ||||||| |||| |||| || ||||||||| ||||||      || |||||||||    
T  47714760 tatgagtaaaaaattaacctccaaagccctctccttccaatgtcttctatttcttccacttgctccttccttttt-tctcaaactctcccctcccctccc 47714858  T
Q  218 ttcccatccaaactcgcaaacaaagcc 244  Q
     |||| ||||||||| |||||||||||    
T  47714859 ctcccctccaaactcccaaacaaagcc 47714885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 49855840 - 49855906
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||| ||||||||| ||| |||||||  ||||||| |   |||||||||||||||||||    
T  49855840 caaaaccctccttcaatacaatttttgagttcctctaaatgagaattattttgtattatgaagaaaa 49855906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 49861057 - 49861099
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  49861057 aagccctcccctcccttcccctccaaactcccaaacaaagcct 49861099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 55439807 - 55439849
Alignment:
Q  204 agccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
    |||| |||||||||||||| ||||||||| |||||||||||||    
T  55439807 agccctcccctcccttcccctccaaactcccaaacaaagccta 55439849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 16883262 - 16883166
Alignment:
Q  153 cccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaagga 250  Q
    |||||||||||||| ||||||| || | |||| || ||||||||| |||||||| |||   |||||| || |  |||||||||| |||||||||||||    
T  16883262 cccctcccattttcttctatttctttcacttgctcattccttttt-tctcaagcattcttttccctttccctgtaaactcgcaatcaaagcctaagga 16883166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 249
Target Start/End: Complemental strand, 36598153 - 36598120
Alignment:
Q  216 ccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||||| ||||||||||||||||||||||||||    
T  36598153 ccttcccctccaaactcgcaaacaaagcctaagg 36598120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 39115126 - 39115171
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| ||||||||||| || ||||||||| |||||||||||||||    
T  39115126 aagccatcccctccctttccctccaaactcacaaacaaagcctaag 39115171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Original strand, 3458324 - 3458383
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||| ||||||||||  |||| ||||| |||||| |||| |||||||||    
T  3458324 cctcctccaatacaattttttagttcc-ccaaacgaggacggttttatattttgaagaaaa 3458383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 27922050 - 27921991
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaa 87  Q
    |||||||||||||||||||| | |||| | | ||||||| |||||||||| ||||||||||    
T  27922050 attaaatttgaagaattcatgtaaacc-tcccaaaccccccaaaaccctcttccaatacaa 27921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 52620695 - 52620651
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    ||||| ||||||||| |||| ||||||||| ||||||||||||||    
T  52620695 aagccctcccctcccctcccctccaaactcccaaacaaagcctaa 52620651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 55445131 - 55445171
Alignment:
Q  204 agccttcccctcccttcccatccaaactcgcaaacaaagcc 244  Q
    |||| |||||||||||||| ||||||||| |||||||||||    
T  55445131 agccctcccctcccttcccctccaaactcccaaacaaagcc 55445171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 3e-58; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 67 - 245
Target Start/End: Original strand, 79645 - 79823
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||||||||  |||||| ||||   |||||||||||||||||    
T  79645 caaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaaacgtaaccccccaaagccctcccctcccattttc 79744  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||| |||| |||| |||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  79745 ctctatttcttccacttgctcgttcctttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 79823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 21173850 - 21174066
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||    
T  21173850 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaatataattttttagttcctccaaatgaggagggttttgtattatg 21173949  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||| ||||||||||| ||||||| |||| |||| || ||||||||| ||  |||| ||||||||||||||  |||    
T  21173950 aagaaaagttaaccc-ccaaagccctcctctcccattttcttctatttcttccacttgctcattccttttt-tcctaagcattcccctcccttccactcc 21174047  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  21174048 aaactcgcaaacaaagcct 21174066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 59 - 246
Target Start/End: Original strand, 23932582 - 23932767
Alignment:
Q  59 aaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctc 158  Q
    ||||||| ||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||   ||||| |||    
T  23932582 aaaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccc-ccaaagccctcctctc 23932680  T
Q  159 ccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
     ||||||||||||||| |||| |||  |  ||||||||| || ||||||||||| ||||||||| |||||||||||||||||||||||    
T  23932681 tcattttcctctatttcttccacttatttattccttttt-tcccaagccttcccttcccttcccctccaaactcgcaaacaaagccta 23932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 26772674 - 26772852
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |   ||||| |||||||||||    
T  26772674 caaaaccctcatccaatacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaagttaa-cctcccaaagcctcctctcccattttc 26772772  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
     ||||||| |||| |||| || ||||||||| ||  ||||||||| ||||||| || ||||||||||||||||||||||||    
T  26772773 ttctatttcttccacttgctcattccttttt-tcctaagccttcctctccctttccctccaaactcgcaaacaaagcctaa 26772852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 23 - 235
Target Start/End: Complemental strand, 43239762 - 43239552
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||||||||||||||||||||| |||| ||| ||| ||| ||||| |||| ||||||||||| ||||| ||||  |||||||||||| |||||| |    
T  43239762 atagattaaatttgaagaattcatataaacccttcaaaatccctcaaaaacctcatccaatacaattttttaattcc-ccaaatgaggaggcttttgtgt 43239664  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||||||||||||||||   ||   ||||||||||||||||||||||||| || | |||  || ||||||||| || |||||||||||||||||||||    
T  43239663 tatgaagaaaagttaaccccataaagccctcccctcccattttcctctatttctttctcttattcattccttttt-tcacaagccttcccctcccttccc 43239565  T
Q  223 atccaaactcgca 235  Q
     || |||||||||    
T  43239564 ctctaaactcgca 43239552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 12506188 - 12506396
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | || ||||  |||| ||| |||||||||||| ||||||||||  ||||||||||||||||  |||| ||    
T  12506188 attaaatttgaagaattcatataaaccctccaaagcccccaaaaatccttctccaatacaattttttagttcccccaaatgaggagggtttaatattttg 12506287  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||  |      ||||||||||||||||||||||||  ||| || ||| ||||| |  |||| |||||||||||||||  |||    
T  12506288 aagaaaagttaaccccccaaagt------ctcccattttcctctattttttccaattgctcattcattttttttccaagtcttcccctcccttcctctcc 12506381  T
Q  227 aaactcgcaaacaaa 241  Q
    |||||||||||||||    
T  12506382 aaactcgcaaacaaa 12506396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 216
Target Start/End: Complemental strand, 34336123 - 34335942
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||||||||||||||||          ||||||| |||||| |||||||||| |||| ||||||||||  |||||||||||| ||| ||||    
T  34336123 atagattaaatttgaagaattcatat----------aaacccctcaaaacactcctccaatgcaattttttagttccctcaaatgaggagg-tttagtat 34336035  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcc 216  Q
     |||||||||||||||||| ||||   ||||||||||||||||||| ||||| |||| |||| || ||||||||| ||||||||||||||||||    
T  34336034 catgaagaaaagttaaccc-ccaaagccctcccctcccattttcctttatttcttccacttgctcattcctttttttctcaagccttcccctcc 34335942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 39194024 - 39193850
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||| |||||||||||||||||||| |||| ||| |||||||  ||||||||||||||||||||  ||||||||||  ||||||| ||||||||| |||    
T  39194024 atagaataaatttgaagaattcatataaacccttcaaaacccccaaaaaccctcctccaatacaactttttagttcccccaaatgaagagggttttatat 39193925  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||||||||||| ||||||| ||||   |||||||||||| | | |||||||| |||| |||| |  |||||||||    
T  39193924 tatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccacttgctacttccttttt 39193850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 41866149 - 41866327
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| |||||||| |  ||||| ||||||||||  ||||||||||||||||||| || | ||   |||||||||||||||||    
T  41866149 caaaaccctcctccaatacaattttttagtttccccaaataaggagggtttaatattatgaagaaaagttaatccccgaaac-cctcccctcccattttc 41866247  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    || ||||| |||| |||| || ||| ||||| ||||||| |||| ||| ||||||| | ||||||||||||||||||||||    
T  41866248 ctttatttcttccacttgctcattcattttt-tctcaagtcttctcctaccttccccttcaaactcgcaaacaaagcctaa 41866327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 1839812 - 1840028
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| |   ||||||| |||||||||||||||||||||| ||| ||||||  ||||||||||||||||| |||| ||    
T  1839812 attaaatttgaagaattcatataaaccctcttaaaccccccaaaaccctcctccaatacaatttttaagttcccccaaatgaggagggttttatattttg 1839911  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||| | | ||||||||   || | | ||||| | |||||||||| |||| |||  || ||||| ||| || |||||||| || | ||||||| |||    
T  1839912 aagaaaaataagccctccaa-agcccctcttcccaatgtcctctatttcttccacttactccttcctatttttc-caagcctttcctttccttcccctcc 1840009  T
Q  227 aaactcgcaaacaaagcct 245  Q
    |||||||||||||||||||    
T  1840010 aaactcgcaaacaaagcct 1840028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 246
Target Start/End: Complemental strand, 8228580 - 8228405
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcct 168  Q
    |||| ||| |||||||| || ||||||||||  ||||||| ||||||||||||||||||| ||||||||||||  ||| |  || || ||||||||| ||    
T  8228580 aaactctcatccaatacgattttttagttccc-caaatgatgagggttttgtattatgaaaaaaagttaacccctcaaatcacttccatcccatttttct 8228482  T
Q  169 ctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
    |||||| |||| |||| || ||||||||| |||||||| ||||||||| ||||  |||||||||||||||||||||||    
T  8228481 ctatttcttccacttgctcattccttttt-tctcaagcattcccctccattcctttccaaactcgcaaacaaagccta 8228405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 68 - 248
Target Start/End: Original strand, 14581781 - 14581959
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcc 167  Q
    |||||||| |||||||||| | |||||  |||  ||||||||||||||||  |||||||||||||||| |||||| |||   |||||| | | |||||||    
T  14581781 aaaaccctactccaatacagttttttaactcccccaaatgaggagggtttattattatgaagaaaagtaaaccct-caaagccctcccattctattttcc 14581879  T
Q  168 tctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| ||||| ||| || ||||||||| || ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  14581880 tctatttcttccggttgctcattccttttt-tcccaagccttcccctcctttcccctgcaaactcgcaaacaaagcctaag 14581959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 133
Target Start/End: Original strand, 40985066 - 40985172
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||| | |||| | | ||||||| |||||||||||||||||||||| ||| ||||||  |||||||||||| ||||||||||||    
T  40985066 attaaatttgaagaattcatgtaaaccctccaaaacccctcaaaaccctcctccaatacaatttttgagttcccccaaatgaggaggattttgtattatg 40985165  T
Q  127 aagaaaa 133  Q
    || ||||    
T  40985166 aataaaa 40985172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 25 - 139
Target Start/End: Original strand, 13369902 - 13370016
Alignment:
Q  25 agattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtatta 124  Q
    |||||||||||||||||||||||| |||||||| |||  || ||||| |||||||||||| ||| | ||||||||  ||||||| || |||||| |||||    
T  13369902 agattaaatttgaagaattcatataaacctttcaaaaaacctcaaaatcctcctccaatagaatttgttagttccctcaaatgatgaaggttttatatta 13370001  T
Q  125 tgaagaaaagttaac 139  Q
     ||||||| ||||||    
T  13370002 cgaagaaatgttaac 13370016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 23 - 248
Target Start/End: Complemental strand, 34272608 - 34272383
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||| ||| |||||||||| ||| |||| |  ||||||||| || |||| |||    
T  34272608 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccttcccccaatacaatttttgagtttccccaaatgagggggattttttat 34272509  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccc 222  Q
    |||||  ||||| | | |||||||   |||| |||| || | || ||||||| |||| |||| || ||||||||| ||  ||  | ||||||||||||||    
T  34272508 tatgagtaaaagattaacctccaaagccctctcctctcaatgtcttctatttcttccacttgctccttcctttttttccaaaatcctcccctcccttccc 34272409  T
Q  223 atccaaactcgcaaacaaagcctaag 248  Q
     | ||||||| |||||||||||||||    
T  34272408 cttcaaactcccaaacaaagcctaag 34272383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 4166636 - 4166753
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    |||||||| |||||||||||| |||||||| |||||| | ||||| || |||| ||||||  ||||||||||| | |||||| || ||||||||||||||    
T  4166636 ttaaatttaaagaattcatataaacctttcaaaacccta-aaaactcttctcccatacaactttttagttccttcgaatgagaagagttttgtattatga 4166734  T
Q  128 agaaaagttaaccctccaa 146  Q
    |||||| || |||| ||||    
T  4166735 agaaaaatttaccccccaa 4166753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 13227799 - 13227685
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||| ||||||||| |||| ||| ||||| | |||||||||| |||||  | |  |||||||| |  ||||||||||| ||||||||| |||    
T  13227799 attaaatttgaataattcatataaacccttcaaaacctctcaaaaccctcatccaacgccactttttagtttcctcaaatgaggagagttttgtataatg 13227700  T
Q  127 aagaaaagttaaccc 141  Q
    |||||||||||||||    
T  13227699 aagaaaagttaaccc 13227685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 23 - 141
Target Start/End: Original strand, 43733108 - 43733227
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| ||||| || ||||||||| || | | | |||| ||  ||||||||||||||||||||| ||||| ||||  |||||||||||| ||||||||    
T  43733108 atagattgaattttaaaaattcatataaatcctccaaaactcccaaaaaccctcctccaatacaattttttaattccctcaaatgaggaggattttgtat 43733207  T
Q  123 tatgaa-gaaaagttaaccc 141  Q
    ||||||  ||||||||||||    
T  43733208 tatgaataaaaagttaaccc 43733227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 67 - 197
Target Start/End: Original strand, 44251590 - 44251720
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    ||||| ||||||| |||||  | ||||||||||| |||||||| ||  ||| |||||||||||||||||||||||| |||   ||||| |||||||||||    
T  44251590 caaaatcctcctcaaatactgttttttagttcct-caaatgagaagaatttagtattatgaagaaaagttaacccttcaaaaccctcctctcccattttc 44251688  T
Q  167 ctctat-tttttccgcttggtcgttccttttt 197  Q
    |||||| | || || |||| ||||||||||||    
T  44251689 ctctatatcttcccacttgctcgttccttttt 44251720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 27085437 - 27085332
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||||||| |||| | | |||||||  |||||| |||||||||||||| ||||||||||  |||||||| || ||||| |||| |     
T  27085437 attaaatttgaagaattcatataaaccctcccaaaccccttaaaaccatcctccaatacaattttttagttcc-ccaaatgagaagagttttatatttta 27085339  T
Q  127 aagaaaa 133  Q
    |||||||    
T  27085338 aagaaaa 27085332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 31297330 - 31297412
Alignment:
Q  17 aataagatagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||| ||||||| |||||||| ||||||||| |||| | |  |||||| |||||||||||||||||||||| ||||||||||    
T  31297330 aataacatagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcctccaatacaattttttagttcc 31297412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 43007765 - 43007688
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    |||||||||| ||||||||| |||||||| |   |||||||||| |||||||||||| ||||||||||||||| ||||    
T  43007765 aaaccctccttcaatacaattttttagtttcccaaaatgaggagagttttgtattataaagaaaagttaaccccccaa 43007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 13865080 - 13865156
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    |||||||||||||||| ||||||||| |||| |||  |||||| ||||||||||| |||||||||| ||| ||||||    
T  13865080 atagattaaatttgaaaaattcatataaacccttcataaccccccaaaaccctcccccaatacaatttttgagttcc 13865156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 240
Target Start/End: Original strand, 36837563 - 36837677
Alignment:
Q  124 atgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttccca 223  Q
    |||||||||||||||||| ||||   ||||| |||| |||||||||||||| |||| |||  |  ||||||||| |||||| |||||||||| ||||||     
T  36837563 atgaagaaaagttaaccc-ccaaagccctcctctcctattttcctctatttcttccacttatttattccttttt-tctcaaaccttcccctctcttcccc 36837660  T
Q  224 tccaaactcgcaaacaa 240  Q
    ||||||||| |||||||    
T  36837661 tccaaactcacaaacaa 36837677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 4873299 - 4873370
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaa 146  Q
    ||||||||| ||||  |||||||||  ||||||||||||||||  |||||||||||||||||||||| ||||    
T  4873299 tcctccaatgcaattgtttagttccctcaaatgaggagggtttcatattatgaagaaaagttaaccccccaa 4873370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 1840241 - 1840307
Alignment:
Q  78 tccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctcc 144  Q
    ||||||||||   |||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||    
T  1840241 tccaatacaactatttagttcctccaaatgaggagggttttgtatcatgaagaaaaattacccctcc 1840307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 9054503 - 9054624
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaa--tgttttagttcctacaaatgaggagggttttgtatta 124  Q
    ||||||||  |||||||||||| ||||   | |||||||  ||||||||||||||||||||  | |||||||| |  |||||||||||| |||||||||     
T  9054503 attaaattgaaagaattcatataaacccgcctaaacccccaaaaaccctcctccaatacaattttttttagtttcctcaaatgaggaggattttgtattt 9054602  T
Q  125 tgaagaaaagttaaccctccaa 146  Q
    ||||||||| | | ||||||||    
T  9054603 tgaagaaaaataagccctccaa 9054624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 25033465 - 25033369
Alignment:
Q  31 aatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    |||||||| ||||||||| ||||  ||  |||||| ||||||||||| |||||||||| ||| ||||||  |||||||||| | |||| ||||||||    
T  25033465 aatttgaaaaattcatataaacccctcataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgaggatgattttttattatga 25033369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 11229262 - 11229321
Alignment:
Q  74 ctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||| ||||||||| ||||||||||| ||||||| || | |||||||||||||||||||    
T  11229262 ctccttcaatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaa 11229321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 10589897 - 10589787
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||||||||| || |||| |||| |||  | | ||||||| ||||| |||||||||||||||| ||||||||| |  ||||||| | | |||| |||    
T  10589897 atagattaaatttaaaaaatttatataaactctcccaaaccccccaaaatcctcctccaatacaattttttagttcttctaaatgagaatgattttatat 10589798  T
Q  123 tatgaagaaaa 133  Q
    | |||||||||    
T  10589797 tttgaagaaaa 10589787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 36906280 - 36906106
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||  ||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||  ||||||||| || |||| |||    
T  36906280 atagattggatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcccccaaatgagggggattttttat 36906181  T
Q  123 tatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    || ||  ||||  | | |||||||   |||| ||||||| | || ||||||| |||| |||| || |||||||||    
T  36906180 tacgagtaaaaaattaacctccaaagccctctcctcccaatgtcttctatttcttccacttgctccttccttttt 36906106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 133
Target Start/End: Complemental strand, 41455301 - 41455240
Alignment:
Q  71 accctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||||||| |||||||| |  ||||||||||||||||| |||| |||||||||    
T  41455301 accctcctccaatacaattttttagtttcc-caaatgaggagggttttatattttgaagaaaa 41455240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 1839680 - 1839635
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||| || ||||||||| |||||||||||||||||||||||||    
T  1839680 aagcctttccttcccttcccctccaaactcgcaaacaaagcctaag 1839635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 44879634 - 44879530
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    |||||||| |||||||||| | |||| | | ||| ||| ||||||| |||||||||||||| ||||||||||   ||||||||||  ||||| || ||||    
T  44879634 ttaaatttaaagaattcatgtaaaccctccaaaatccctcaaaaccttcctccaatacaattttttagttcc-ctaaatgaggagaattttgaatcatga 44879536  T
Q  128 agaaaa 133  Q
    ||||||    
T  44879535 agaaaa 44879530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 44880287 - 44880391
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatga 127  Q
    |||||||| |||||||||| | |||| | | ||| ||| ||||||| |||||||||||||| ||||||||||   ||||||||||  ||||| || ||||    
T  44880287 ttaaatttaaagaattcatgtaaaccctccaaaatccctcaaaaccttcctccaatacaattttttagttcc-ctaaatgaggagaattttgaatcatga 44880385  T
Q  128 agaaaa 133  Q
    ||||||    
T  44880386 agaaaa 44880391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 1942041 - 1942117
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||    
T  1942041 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcc 1942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 132
Target Start/End: Original strand, 10605180 - 10605244
Alignment:
Q  68 aaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaa 132  Q
    ||||||||| ||||||||||| ||| ||||||| ||||| | || | ||||||||||||||||||    
T  10605180 aaaaccctcatccaatacaatatttgagttcctccaaattaagaagattttgtattatgaagaaa 10605244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 22330729 - 22330674
Alignment:
Q  77 ctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||| |||||||||||| ||| ||||||  |||||||||||||||||||    
T  22330729 ctccaatacaattttttagttccta-aaaagaggagaattttgtattatgaagaaaa 22330674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Complemental strand, 29584241 - 29584169
Alignment:
Q  69 aaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccc 141  Q
    ||||||||| |||||||| | ||||||||    || ||||||||||||| ||||||||| |||||||||||||    
T  29584241 aaaccctcccccaatacatttttttagttatcccatatgaggagggtttggtattatgatgaaaagttaaccc 29584169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 36102878 - 36102982
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| |||||| || |||| | |  |||||| |||||||||||  ||||||||  ||| ||||||| ||||||||| || |||| |||    
T  36102878 atagattgaatttgaaaaattcaaataaaccctccataaccccccaaaaccctcccgcaatacaaattttgagttcctccaaatgagggggattttttat 36102977  T
Q  123 tatga 127  Q
    |||||    
T  36102978 tatga 36102982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 3393924 - 3393881
Alignment:
Q  208 ttcccctcccttcccatccaaactcgcaaacaaagcctaaggaa 251  Q
    |||||||||||| || ||||||||||||| ||||||||||||||    
T  3393924 ttcccctccctttccctccaaactcgcaagcaaagcctaaggaa 3393881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 34553302 - 34553345
Alignment:
Q  209 tcccctcccttccca-tccaaactcgcaaacaaagcctaaggaa 251  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  34553302 tcccctcccttccccctccaaactcgcaaacaaagcctaaggaa 34553345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 1111293 - 1111339
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||| ||||| ||||| || ||||||||||||||||||||||||||    
T  1111293 aagccctccccaccctttccctccaaactcgcaaacaaagcctaagg 1111339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 1941904 - 1941866
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcctaa 247  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  1941904 tcccctcccttcccctccaaactcccaaacaaagcctaa 1941866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 8948714 - 8948609
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||| |||||| |||| |   ||||| | |||||| |  |||||||||||| |||||||||| | |||||| |||||||||  ||| ||    
T  8948714 attaaatttgaagaagtcatataaaccctcttaaacctctcaaaactcgtctccaatacaattttttagttccca-aaatgacgagggttttacattttg 8948616  T
Q  127 aagaaaa 133  Q
    |||||||    
T  8948615 aagaaaa 8948609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 248
Target Start/End: Original strand, 21262753 - 21262787
Alignment:
Q  214 tcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||||||| |||||||||||||||||||||||||    
T  21262753 tcccttcccctccaaactcgcaaacaaagcctaag 21262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 28416193 - 28416258
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||| ||||||||||| || |||||||  ||||| ||||||||||| |||| |||||||||    
T  28416193 caaaaccctcatccaatacaattttgtagttcc-ccaaataaggagggttttatattttgaagaaaa 28416258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 36837520 - 36837558
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaa 105  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  36837520 caaaaccctcctccaatacaattttttagttccttcaaa 36837558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 36906410 - 36906452
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  36906410 aagccctcccctcccttcccctccaaactcccaaacaaagcct 36906452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 79480 - 79439
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcc 244  Q
    |||||||||| |||| |||| |||||||||||||||||||||    
T  79480 aagccttcccttcccctcccctccaaactcgcaaacaaagcc 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 7079982 - 7080079
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||| |||||||||||||||||||  |||| | | |||  |||| ||| |||| ||||||||||| ||||||||||  ||||| ||||||||||| |||    
T  7079982 atagactaaatttgaagaattcatacaaaccatcccaaa-tccaccaaaacctcttccaatacaattttttagttcc--caaataaggagggttttatat 7080078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 13864952 - 13864907
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||| ||||||||||||||  |||||||||||||||    
T  13864952 aagccctcccctcctttcccatccaaactttcaaacaaagcctaag 13864907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 133
Target Start/End: Original strand, 16024598 - 16024651
Alignment:
Q  80 caatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||||||| ||| |||||| |||||| || ||| |||||||||||||||||||    
T  16024598 caatacaatttttgagttcccacaaattagtaggattttgtattatgaagaaaa 16024651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 1840197 - 1840229
Alignment:
Q  21 agatagattaaatttgaagaattcatattaacc 53  Q
    |||||||||||||||||||||||||||| ||||    
T  1840197 agatagattaaatttgaagaattcatataaacc 1840229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 127
Target Start/End: Original strand, 2474755 - 2474858
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||| |||||  ||||||||| ||| |||||   |||||||||||| |||| |||    
T  2474755 atagattgaatttgaaaaattcatataaaccctccataacccc-caaaatcctcccacaatacaatttttaagttctcccaaatgaggaggattttttat 2474853  T
Q  123 tatga 127  Q
    |||||    
T  2474854 tatga 2474858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 133
Target Start/End: Complemental strand, 28169920 - 28169860
Alignment:
Q  73 cctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    |||||||||||||| | ||| ||||||  ||||| || ||| |||||||||||||||||||    
T  28169920 cctcctccaatacattttttgagttcccccaaattagaaggattttgtattatgaagaaaa 28169860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 245
Target Start/End: Complemental strand, 34148434 - 34148398
Alignment:
Q  209 tcccctcccttcccatccaaactcgcaaacaaagcct 245  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  34148434 tcccctcccttcccctccaaactcccaaacaaagcct 34148398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 26469 - 26249
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaa-tacaatgttttagttcctacaaatgaggagggttttgtattat 125  Q
    |||||||||||||||||| |||||||| | | ||||||| |||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  26469 attaaatttgaagaattcttattaaccctccaaaaccccccaaaaccctcctccaaatacaattttttagttcctccaaatgaggagggttttgtattat 26370  T
Q  126 gaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatc 225  Q
    |||||||||||| ||| ||||   ||||| ||||||||||||||||||| |||| |||  |  ||||||||| || ||||||||||||||||||||| |     
T  26369 gaagaaaagttatccccccaaagccctcctctcccattttcctctatttcttccacttacttattccttttt-tcccaagccttcccctcccttcccctt 26271  T
Q  226 caaactcgcaaacaaagcctaa 247  Q
    |||||||| |||||||||||||    
T  26270 caaactcgtaaacaaagcctaa 26249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 111; Significance: 8e-56; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 27 - 245
Target Start/End: Original strand, 2015 - 2231
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | |||| || |||| || |||||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  2015 attaaatttgaagaattcttattaaccctccaaaactccccaaatccttcctccaatacaatttttcagttcctccaaatgaggagggttttgtattatg 2114  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatcc 226  Q
    ||||||||||||||| ||||   ||||| ||||||||||| ||||||| |||| |||| || ||||||||| ||| |||||||||||||||||||| |||    
T  2115 aagaaaagttaaccc-ccaaagccctcctctcccattttcttctatttcttccacttgctcattccttttt-tcttaagccttcccctcccttcccctcc 2212  T
Q  227 aaactcgcaaacaaagcct 245  Q
    ||||| |||||||||||||    
T  2213 aaacttgcaaacaaagcct 2231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 27 - 197
Target Start/End: Complemental strand, 29333 - 29164
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    |||||||||||||||||| |||||||| | | ||||||| |||| || |||||||||||||| ||||||||||| ||||||| |||||||||||||||||    
T  29333 attaaatttgaagaattcttattaaccctccaaaaccccccaaatccttcctccaatacaattttttagttcctccaaatgatgagggttttgtattatg 29234  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    ||||||||||||||||| ||   ||| | ||||||||||| ||||||| |||| |||| || |||||||||    
T  29233 aagaaaagttaaccctcaaagc-ccttctctcccattttcttctatttcttccacttgctcattccttttt 29164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 93498 - 93617
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||| |||| |||||||| |   ||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||    
T  93498 attaaatttgaagcattcttattaaccctcgaaaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatg 93597  T
Q  127 aagaaaagttaaccctccaa 146  Q
    ||||||||||||||| ||||    
T  93598 aagaaaagttaaccccccaa 93617  T

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Target: scaffold0388 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 242
Target Start/End: Complemental strand, 7164 - 6940
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaa-ccctcctccaatacaatgttttagttcctacaaatgaggagggttttgta 121  Q
    ||||||||||||| || ||||||||| |||| | | | | ||  ||||| ||||| ||||||||||| |||| |||  | ||||||||||||||||||||    
T  7164 atagattaaatttaaaaaattcatataaaccctccaacatccttcaaaacccctcttccaatacaatatttttgttttttcaaatgaggagggttttgta 7065  T
Q  122 ttatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct----caagccttcccctccc 217  Q
    |||||||||||||| ||||  ||||   ||||||||||||||||||||||||| |||  |||| || ||| ||||| | |    |||| |||||||||||    
T  7064 ttatgaagaaaagtaaacctcccaaaaccctcccctcccattttcctctatttcttctacttgctcattctttttttttttttccaagtcttcccctccc 6965  T
Q  218 ttcccatccaaactcgcaaacaaag 242  Q
    ||||| |||||||||||||||||||    
T  6964 ttcccctccaaactcgcaaacaaag 6940  T

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Target: scaffold0002 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 214
Target Start/End: Original strand, 90907 - 91053
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttc 166  Q
    |||||||||||||||||||||| ||||| ||    | |||||||||||||||||| ||||||||||||||||||| ||||   |||||||||| |||||     
T  90907 caaaaccctcctccaatacaattttttaattatccccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaagccctcccctcctattttt 91006  T
Q  167 ctctattttttccgcttggtcgttcctttttatctcaagccttcccct 214  Q
    ||| |||| |||| | || || || |||||| || |||||||||||||    
T  91007 ctcaatttcttccacctgctcatt-ctttttttcccaagccttcccct 91053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 37210 - 36992
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgtttt-agttcctacaaatgaggagggttttgtattat 125  Q
    |||||||||||||||||||||| |||| | | ||| | | |||||||||| | ||||||||| |||| ||||||  ||||||| |||||||| | |||||    
T  37210 attaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttccc-caaatgatgagggtttagcattat 37112  T
Q  126 gaagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttcctttttatct-caagccttcccctcccttcccat 224  Q
    ||| | |||||||||| ||||  |||||  || ||||||||||| |||| |||| |||| || ||| ||||| | | |||| ||| || | | ||||| |    
T  37111 gaatataagttaaccccccaaagtcctcttcttccattttcctcgatttcttccacttgctcattcatttttttttccaagtctttcctttctttcccct 37012  T
Q  225 ccaaactcgcaaacaaagcc 244  Q
    ||||||| ||||||||||||    
T  37011 ccaaacttgcaaacaaagcc 36992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 30542 - 30374
Alignment:
Q  28 ttaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaa-tgttttagttcctacaaatgaggagggttttgtattatg 126  Q
    ||||||||||||||||||||| |||| | | ||| | | |||||||||| | |||||||| | ||||||||||  |||||||||| ||||| | ||||||    
T  30542 ttaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttcc-ccaaatgagga-ggtttagcattatg 30445  T
Q  127 aagaaaagttaaccctccaatttcctcccctcccattttcctctattttttccgcttggtcgttccttttt 197  Q
    || | |||||||||| ||||   ||||  || ||||||||||| |||| |||| |||| || ||| |||||    
T  30444 aatataagttaaccccccaaaaccctcttcttccattttcctcgatttcttccacttgctcattcattttt 30374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1163 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1163
Description:

Target: scaffold1163; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 150 - 244
Target Start/End: Complemental strand, 2024 - 1931
Alignment:
Q  150 cctcccctcccattttcctctattttttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagcc 244  Q
    ||||||||||||||||| ||||||| |||| |||| || ||||||||| ||  ||| |||||| ||||||||| |||||||||||||||||||||    
T  2024 cctcccctcccattttcttctatttcttccacttgctccttcctttttttca-aagtcttcccttcccttcccctccaaactcgcaaacaaagcc 1931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Original strand, 12281 - 12373
Alignment:
Q  67 caaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcc 159  Q
    ||||| |||||||||||||||| ||||| ||    | |||||||||||||||||| ||||||||||||||||||| ||||   ||||||||||    
T  12281 caaaaacctcctccaatacaattttttaattatccccaatgaggagggttttgtaatatgaagaaaagttaaccccccaaagccctcccctcc 12373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0274 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 171
Target Start/End: Complemental strand, 15983 - 15863
Alignment:
Q  50 aacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaattt 149  Q
    |||||| | ||| ||| |||||||||||||||||||||| ||| | ||||  |||||||||||  ||||  ||||||||||||| |||||||| |||       
T  15983 aaccttccaaaatcccccaaaaccctcctccaatacaatttttaaattcc-ccaaatgaggagattttttcattatgaagaaaaattaacccttcaaaac 15885  T
Q  150 cctcccctcccattttcctcta 171  Q
     ||||| |||||||||||||||    
T  15884 tctcccatcccattttcctcta 15863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 99
Target Start/End: Original strand, 9397 - 9469
Alignment:
Q  27 attaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    |||||||||||||||||||||| |||| |   ||| ||| ||||||||||||||| |||||| ||||||||||    
T  9397 attaaatttgaagaattcatataaaccctctcaaagcccccaaaaccctcctccagtacaattttttagttcc 9469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 102 - 174
Target Start/End: Original strand, 44986 - 45056
Alignment:
Q  102 caaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattt 174  Q
    ||||||||||| |||||||||||||||| |||||||| || ||||  || |||||||||||||||||||||||    
T  44986 caaatgaggagagttttgtattatgaag-aaagttaaacc-ccaaagtcatcccctcccattttcctctattt 45056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 7557 - 7498
Alignment:
Q  74 ctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaa 133  Q
    ||||| ||||||||| ||||||||||| ||||||| || | |||||||||||||||||||    
T  7557 ctccttcaatacaattttttagttcctccaaatgacgaagattttgtattatgaagaaaa 7498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 246
Target Start/End: Complemental strand, 82837 - 82666
Alignment:
Q  75 tcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaagaaaagttaaccctccaatttcctcccctcccattttcctctattt 174  Q
    |||||||||||||| ||  ||||||  ||||| |||||| ||||||||||||||||||| | ||||| | ||   |||   ||| ||   || |||||||    
T  82837 tcctccaatacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaataaacccccgaaagcccttttctctcaaagtcatctattt 82738  T
Q  175 tttccgcttggtcgttcctttttatctcaagccttcccctcccttcccatccaaactcgcaaacaaagccta 246  Q
     |||| |||| || ||||||||| ||  ||||| ||||||||||| || ||||||||| |||| ||||||||    
T  82737 cttccacttgctccttcctttttttccaaagccctcccctcccttaccctccaaactcacaaagaaagccta 82666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 74717 - 74784
Alignment:
Q  62 ccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtattatgaag 129  Q
    |||| |||||||||||||||||||||| ||| ||||||  ||||| ||| || |||||||||||||||    
T  74717 ccccccaaaaccctcctccaatacaatttttcagttccctcaaattagggggattttgtattatgaag 74784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 1800 - 1846
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaagg 249  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  1800 aagccctcccctcccttcccctccaaactctcaaacaaagcctaagg 1846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 127
Target Start/End: Complemental strand, 1671 - 1568
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcctacaaatgaggagggttttgtat 122  Q
    |||||||  ||||||| ||||||||| |||| |    |||||| ||||||||||| |||||||||| ||| ||||||| || |||||| ||| ||| |||    
T  1671 atagattggatttgaaaaattcatataaaccctctataaccccccaaaaccctcccccaatacaatttttgagttcctccatatgagg-gggatttttat 1573  T
Q  123 tatga 127  Q
    |||||    
T  1572 tatga 1568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 939 - 906
Alignment:
Q  20 aagatagattaaatttgaagaattcatattaacc 53  Q
    ||||||||||||||||||||||||||||||||||    
T  939 aagatagattaaatttgaagaattcatattaacc 906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 35315 - 35270
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| |||||||||||||||    
T  35315 aagccctcccctcccttcccctccaaactcccaaacaaagcctaag 35270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 35443 - 35519
Alignment:
Q  23 atagattaaatttgaagaattcatattaacctttcgaaaccccacaaaaccctcctccaatacaatgttttagttcc 99  Q
    ||||||| |||||||| ||||||||| |||| | |  |||||| ||||||||||| |||||||||| ||| ||||||    
T  35443 atagattgaatttgaaaaattcatataaaccctccataaccccccaaaaccctcccccaatacaatttttgagttcc 35519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 59711 - 59669
Alignment:
Q  206 ccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    |||||||||||| |||| ||||||||| |||||||||||||||    
T  59711 ccttcccctcccctcccctccaaactcccaaacaaagcctaag 59669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 361 - 406
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |||||    
T  361 aagccctcccctcccttcccctccaaactctcaaacaaagtctaag 406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 248
Target Start/End: Complemental strand, 2232 - 2187
Alignment:
Q  203 aagccttcccctcccttcccatccaaactcgcaaacaaagcctaag 248  Q
    ||||| |||||||||||||| ||||||||| ||||||||| |||||    
T  2232 aagccctcccctcccttcccctccaaactctcaaacaaagtctaag 2187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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