View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_low_182 (Length: 214)
Name: NF19103_low_182
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_182 |
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Alignment Details
Target: chr4 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 36 - 197
Target Start/End: Original strand, 8006544 - 8006705
Alignment:
| Q |
36 |
gaagcaacaatcagtatgatcccaaacgtataaaagatgaaacgatacaatattagtgaaaatcaaaagtctatgcatacttcttgtatagaggctccct |
135 |
Q |
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| T |
8006544 |
gaagcaacaatcagtatgatcccaaacgtataaaagatgaaacgatacaatatttgtaaaaatcaaaagtctacgcatacttcttgtatagaggctccct |
8006643 |
T |
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| Q |
136 |
tccagacatatcagacaagaacatgaccacactgcatgctaggaaaagagatgcttaatatg |
197 |
Q |
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| T |
8006644 |
tccagacatatcagacaagaacatgaccacactgcatgctaggaaaagaaatgcttaatatg |
8006705 |
T |
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