View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19103_low_42 (Length: 404)

Name: NF19103_low_42
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19103_low_42
NF19103_low_42
[»] chr7 (33 HSPs)
chr7 (22-389)||(7058445-7058812)
chr7 (22-218)||(7029204-7029403)
chr7 (22-218)||(7013846-7014045)
chr7 (292-389)||(2334269-2334367)
chr7 (51-109)||(7063227-7063285)
chr7 (294-389)||(24339661-24339758)
chr7 (292-389)||(5409783-5409876)
chr7 (292-389)||(9778519-9778612)
chr7 (344-389)||(18039018-18039063)
chr7 (292-389)||(13770710-13770803)
chr7 (294-342)||(20549848-20549896)
chr7 (293-389)||(32093967-32094060)
chr7 (348-389)||(21560522-21560563)
chr7 (344-389)||(26033456-26033501)
chr7 (292-389)||(43027416-43027509)
chr7 (346-389)||(1885592-1885635)
chr7 (345-388)||(27945061-27945104)
chr7 (293-388)||(32308140-32308237)
chr7 (348-389)||(3991343-3991384)
chr7 (177-226)||(7063173-7063222)
chr7 (344-389)||(7438725-7438770)
chr7 (348-389)||(9408333-9408374)
chr7 (343-388)||(22602704-22602749)
chr7 (292-378)||(25822685-25822773)
chr7 (344-380)||(11272581-11272617)
chr7 (345-389)||(18215182-18215226)
chr7 (349-389)||(25481921-25481961)
chr7 (349-388)||(21880172-21880211)
chr7 (349-388)||(25956465-25956504)
chr7 (349-389)||(15680828-15680868)
chr7 (345-389)||(17257985-17258029)
chr7 (349-389)||(19213822-19213862)
chr7 (348-388)||(19992021-19992061)
[»] scaffold0136 (1 HSPs)
scaffold0136 (292-389)||(3790-3889)
[»] chr1 (43 HSPs)
chr1 (292-389)||(47989516-47989615)
chr1 (293-389)||(5944302-5944400)
chr1 (291-389)||(1486655-1486749)
chr1 (292-389)||(6612112-6612211)
chr1 (292-389)||(31694651-31694750)
chr1 (345-389)||(24577182-24577226)
chr1 (344-389)||(113318-113363)
chr1 (292-389)||(18337348-18337436)
chr1 (292-389)||(22515839-22515927)
chr1 (345-389)||(1704988-1705032)
chr1 (300-389)||(30173711-30173802)
chr1 (349-389)||(51410044-51410084)
chr1 (350-389)||(1815276-1815315)
chr1 (346-389)||(6332689-6332732)
chr1 (320-388)||(9629869-9629939)
chr1 (345-388)||(20157346-20157389)
chr1 (350-389)||(40258934-40258973)
chr1 (342-388)||(5376493-5376539)
chr1 (344-389)||(35919271-35919316)
chr1 (292-389)||(6427483-6427582)
chr1 (349-389)||(22881616-22881656)
chr1 (349-389)||(38078661-38078701)
chr1 (349-389)||(42359449-42359489)
chr1 (344-388)||(44482250-44482294)
chr1 (350-389)||(28273089-28273128)
chr1 (342-389)||(28663627-28663674)
chr1 (345-383)||(2218264-2218302)
chr1 (351-389)||(21378597-21378635)
chr1 (346-388)||(25272502-25272544)
chr1 (354-388)||(31015063-31015097)
chr1 (346-388)||(34371733-34371775)
chr1 (292-342)||(37598888-37598938)
chr1 (348-389)||(15449231-15449272)
chr1 (349-382)||(19058856-19058889)
chr1 (292-378)||(40917779-40917867)
chr1 (353-389)||(18471319-18471355)
chr1 (349-389)||(21620974-21621014)
chr1 (349-381)||(24334705-24334737)
chr1 (344-388)||(25361906-25361950)
chr1 (349-389)||(31672895-31672935)
chr1 (292-389)||(32461405-32461503)
chr1 (292-388)||(38503340-38503436)
chr1 (349-389)||(46348383-46348423)
[»] chr6 (38 HSPs)
chr6 (295-385)||(8365463-8365555)
chr6 (300-389)||(16766716-16766807)
chr6 (283-389)||(5970040-5970148)
chr6 (291-389)||(8713999-8714099)
chr6 (283-388)||(9629403-9629510)
chr6 (294-389)||(9107313-9107410)
chr6 (345-389)||(10770670-10770714)
chr6 (302-389)||(9522910-9522999)
chr6 (345-387)||(9911524-9911566)
chr6 (292-389)||(31384939-31385037)
chr6 (343-388)||(19369837-19369882)
chr6 (292-388)||(10339066-10339165)
chr6 (349-389)||(26402680-26402720)
chr6 (349-389)||(28152117-28152157)
chr6 (349-389)||(34595153-34595193)
chr6 (344-382)||(785450-785488)
chr6 (344-389)||(12696343-12696388)
chr6 (292-389)||(17841541-17841629)
chr6 (349-389)||(7801156-7801196)
chr6 (349-389)||(7977830-7977870)
chr6 (292-389)||(8776920-8777013)
chr6 (349-389)||(28715314-28715354)
chr6 (349-388)||(6751882-6751921)
chr6 (345-388)||(9025490-9025533)
chr6 (351-389)||(16833327-16833365)
chr6 (292-329)||(13360325-13360362)
chr6 (345-382)||(21395304-21395341)
chr6 (349-389)||(403864-403904)
chr6 (349-389)||(426514-426554)
chr6 (349-389)||(853859-853899)
chr6 (349-389)||(1700371-1700411)
chr6 (349-389)||(3209401-3209441)
chr6 (349-389)||(7027261-7027301)
chr6 (345-389)||(7930324-7930368)
chr6 (345-389)||(17302576-17302620)
chr6 (344-376)||(22745989-22746021)
chr6 (344-388)||(26562709-26562753)
chr6 (349-389)||(32978899-32978939)
[»] chr5 (31 HSPs)
chr5 (292-389)||(39698560-39698659)
chr5 (292-389)||(31084342-31084435)
chr5 (296-389)||(7677724-7677819)
chr5 (292-388)||(23015936-23016028)
chr5 (292-389)||(15382498-15382592)
chr5 (292-389)||(21191008-21191096)
chr5 (292-382)||(21542056-21542148)
chr5 (349-389)||(6247641-6247681)
chr5 (345-389)||(13287395-13287439)
chr5 (349-389)||(15884007-15884047)
chr5 (292-389)||(21522769-21522868)
chr5 (292-389)||(21533335-21533434)
chr5 (293-388)||(19579721-19579818)
chr5 (344-389)||(21351900-21351945)
chr5 (292-389)||(21576697-21576785)
chr5 (291-385)||(30183572-30183668)
chr5 (283-328)||(32630678-32630723)
chr5 (344-389)||(37328839-37328884)
chr5 (349-389)||(33178044-33178084)
chr5 (349-388)||(2548407-2548446)
chr5 (346-389)||(12199949-12199992)
chr5 (350-389)||(19028999-19029038)
chr5 (350-389)||(42893379-42893418)
chr5 (353-387)||(7218271-7218305)
chr5 (349-389)||(8420046-8420086)
chr5 (345-389)||(16374338-16374382)
chr5 (292-340)||(17123107-17123154)
chr5 (353-389)||(24906305-24906341)
chr5 (345-389)||(30135333-30135377)
chr5 (292-328)||(39268550-39268586)
chr5 (349-389)||(43564900-43564940)
[»] chr3 (37 HSPs)
chr3 (292-385)||(41961591-41961686)
chr3 (292-389)||(49651728-49651826)
chr3 (292-389)||(4987232-4987331)
chr3 (292-389)||(34185064-34185163)
chr3 (291-387)||(28812536-28812634)
chr3 (292-389)||(28918020-28918110)
chr3 (295-389)||(10954971-10955056)
chr3 (292-389)||(27505265-27505358)
chr3 (344-389)||(14209132-14209177)
chr3 (292-389)||(55401094-55401182)
chr3 (304-389)||(14832118-14832205)
chr3 (283-389)||(40993278-40993375)
chr3 (348-389)||(1509558-1509599)
chr3 (344-389)||(14829708-14829753)
chr3 (349-386)||(25775531-25775568)
chr3 (344-389)||(25948882-25948927)
chr3 (352-389)||(26508129-26508166)
chr3 (348-389)||(34910336-34910377)
chr3 (349-389)||(8587021-8587061)
chr3 (349-389)||(8593156-8593196)
chr3 (349-389)||(51206353-51206393)
chr3 (346-389)||(15796291-15796334)
chr3 (346-388)||(4990964-4991006)
chr3 (351-389)||(20503484-20503522)
chr3 (347-389)||(21256984-21257026)
chr3 (355-389)||(35994744-35994778)
chr3 (302-389)||(55212982-55213070)
chr3 (344-389)||(3164020-3164065)
chr3 (292-340)||(6525635-6525683)
chr3 (349-389)||(7928469-7928509)
chr3 (295-380)||(8039779-8039866)
chr3 (292-320)||(8842408-8842436)
chr3 (345-389)||(14747581-14747625)
chr3 (349-389)||(16000016-16000056)
chr3 (345-389)||(16789031-16789075)
chr3 (349-389)||(21479137-21479177)
chr3 (345-389)||(39756255-39756299)
[»] scaffold0019 (1 HSPs)
scaffold0019 (292-389)||(71744-71843)
[»] chr2 (28 HSPs)
chr2 (292-389)||(30717471-30717570)
chr2 (292-389)||(37419762-37419861)
chr2 (292-372)||(26769547-26769629)
chr2 (292-389)||(2438671-2438759)
chr2 (283-389)||(15657883-15657991)
chr2 (344-389)||(23058437-23058482)
chr2 (344-389)||(33153443-33153488)
chr2 (349-389)||(19536397-19536437)
chr2 (291-388)||(34784922-34785021)
chr2 (292-380)||(35056896-35056986)
chr2 (291-387)||(36756284-36756382)
chr2 (342-388)||(32749818-32749864)
chr2 (344-389)||(12668418-12668463)
chr2 (349-389)||(5040753-5040793)
chr2 (292-389)||(11223805-11223903)
chr2 (349-385)||(18421986-18422022)
chr2 (349-389)||(30404850-30404890)
chr2 (349-389)||(37558996-37559036)
chr2 (346-385)||(974770-974809)
chr2 (349-388)||(43586005-43586044)
chr2 (350-388)||(18889592-18889630)
chr2 (347-389)||(20539672-20539714)
chr2 (344-389)||(4882691-4882736)
chr2 (351-388)||(14450797-14450834)
chr2 (344-389)||(14996218-14996263)
chr2 (349-386)||(44635520-44635557)
chr2 (349-389)||(15972892-15972932)
chr2 (349-381)||(21624294-21624326)
[»] chr4 (34 HSPs)
chr4 (293-385)||(19482691-19482785)
chr4 (283-389)||(16073413-16073510)
chr4 (292-389)||(715557-715647)
chr4 (292-389)||(752883-752973)
chr4 (292-389)||(28084541-28084631)
chr4 (283-389)||(28964191-28964288)
chr4 (292-389)||(3947713-3947806)
chr4 (345-389)||(11596348-11596392)
chr4 (349-389)||(12797338-12797378)
chr4 (349-389)||(42640548-42640588)
chr4 (292-388)||(30982819-30982917)
chr4 (283-389)||(4157455-4157552)
chr4 (351-389)||(29205463-29205501)
chr4 (347-389)||(30298966-30299008)
chr4 (347-389)||(30327834-30327876)
chr4 (344-389)||(4383386-4383431)
chr4 (344-389)||(12895111-12895156)
chr4 (288-389)||(21945522-21945614)
chr4 (292-389)||(23292938-23293026)
chr4 (349-389)||(6879465-6879505)
chr4 (292-389)||(19312354-19312453)
chr4 (344-388)||(37496724-37496768)
chr4 (349-389)||(49431045-49431085)
chr4 (349-389)||(54580023-54580063)
chr4 (292-331)||(3064880-3064919)
chr4 (293-340)||(29205527-29205574)
chr4 (351-389)||(6485613-6485651)
chr4 (344-389)||(11797623-11797668)
chr4 (344-389)||(22234885-22234930)
chr4 (345-386)||(28000738-28000779)
chr4 (349-389)||(4157168-4157208)
chr4 (345-389)||(12708166-12708210)
chr4 (344-388)||(24613696-24613740)
chr4 (357-389)||(40481655-40481687)
[»] scaffold0450 (1 HSPs)
scaffold0450 (292-385)||(8576-8671)
[»] chr8 (25 HSPs)
chr8 (292-389)||(22651995-22652094)
chr8 (346-389)||(25566860-25566903)
chr8 (345-389)||(2572052-2572096)
chr8 (349-389)||(4948671-4948711)
chr8 (292-389)||(29510245-29510344)
chr8 (348-389)||(8342991-8343032)
chr8 (344-389)||(13436959-13437004)
chr8 (344-389)||(24858031-24858075)
chr8 (351-388)||(40332211-40332248)
chr8 (292-389)||(15816070-15816169)
chr8 (349-389)||(20873088-20873128)
chr8 (349-389)||(24613539-24613579)
chr8 (292-388)||(11927027-11927125)
chr8 (350-389)||(31557015-31557054)
chr8 (355-389)||(18407738-18407772)
chr8 (349-387)||(24669454-24669492)
chr8 (348-389)||(8343335-8343376)
chr8 (344-389)||(17468503-17468548)
chr8 (345-389)||(5307079-5307123)
chr8 (349-389)||(22596013-22596053)
chr8 (348-388)||(26902174-26902214)
chr8 (344-388)||(29447105-29447149)
chr8 (349-385)||(30077387-30077423)
chr8 (345-389)||(30271287-30271331)
chr8 (349-389)||(36450754-36450794)
[»] scaffold0793 (1 HSPs)
scaffold0793 (292-389)||(4833-4923)
[»] scaffold0025 (1 HSPs)
scaffold0025 (346-389)||(23789-23832)
[»] scaffold0223 (1 HSPs)
scaffold0223 (335-389)||(20191-20245)
[»] scaffold0171 (2 HSPs)
scaffold0171 (344-389)||(23439-23484)
scaffold0171 (348-389)||(23530-23571)
[»] scaffold0086 (1 HSPs)
scaffold0086 (292-389)||(2947-3046)
[»] scaffold0003 (1 HSPs)
scaffold0003 (292-389)||(241613-241712)
[»] scaffold0512 (1 HSPs)
scaffold0512 (291-342)||(4987-5038)
[»] scaffold0021 (1 HSPs)
scaffold0021 (352-389)||(130501-130538)
[»] scaffold0652 (1 HSPs)
scaffold0652 (349-389)||(462-502)
[»] scaffold0044 (1 HSPs)
scaffold0044 (344-388)||(53200-53244)
[»] scaffold0027 (1 HSPs)
scaffold0027 (349-389)||(46701-46741)
[»] scaffold0004 (2 HSPs)
scaffold0004 (350-386)||(123650-123686)
scaffold0004 (348-389)||(83179-83220)
[»] scaffold0011 (1 HSPs)
scaffold0011 (350-389)||(17750-17789)
[»] scaffold0008 (1 HSPs)
scaffold0008 (292-388)||(263313-263411)
[»] scaffold0236 (1 HSPs)
scaffold0236 (346-388)||(25765-25807)
[»] scaffold0083 (1 HSPs)
scaffold0083 (349-382)||(45530-45563)
[»] scaffold0314 (1 HSPs)
scaffold0314 (344-388)||(8968-9012)
[»] scaffold0246 (1 HSPs)
scaffold0246 (357-389)||(19594-19626)
[»] scaffold0123 (1 HSPs)
scaffold0123 (344-388)||(44520-44564)
[»] scaffold0103 (1 HSPs)
scaffold0103 (357-389)||(51830-51862)
[»] scaffold0050 (1 HSPs)
scaffold0050 (349-389)||(70297-70337)
[»] scaffold0049 (1 HSPs)
scaffold0049 (344-380)||(56950-56986)


Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 22 - 389
Target Start/End: Complemental strand, 7058812 - 7058445
Alignment:
Q  22 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagttgaataaaagtgcttctttaatcttgg 121  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||    
T  7058812 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatcaacgtagtagtcgaataaaagtgcttctttaatcttgg 7058713  T
Q  122 tgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattcatga 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  7058712 tgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatggttgaagtttagcttgtattaggattcatga 7058613  T
Q  222 ttagagagacttcatatgctagctggtttgtgtattagaagagctttgagtttaatttagttgaatcatagacactcctcggattaggcgtgtctcaatg 321  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  7058612 ttagacagacttcatatggtagctggtttgtgtattagaagagctttgagtttgatttagttgaaccatagacactccttggattaggcgtgtgtcaatg 7058513  T
Q  322 tcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||    
T  7058512 tcggacatgtgttgtgtccgatcgacacgacaccaacacttgtaattacactgaattacatgattttt 7058445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 7029403 - 7029204
Alignment:
Q  22 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagt---tgaataaaagtgcttctttaatct 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  7029403 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatgaatgtagtagtagttgaatagaagtggttctttaatct 7029304  T
Q  119 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||| |||||||||||||||    
T  7029303 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatagttgagtttatgttggaatggttaaagtttagatggtattagtattca 7029204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 22 - 218
Target Start/End: Complemental strand, 7014045 - 7013846
Alignment:
Q  22 tatgaatgttggaaagttgcttaaatttgtgaattactgtcaagagagcatattttgcaatgaatgtagtagt---tgaataaaagtgcttctttaatct 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||| ||||| |||||||||||    
T  7014045 tatgaatgttggaaagttgcttaaatttatgaattactgtcaagagagcatattttgcaatgaatgtagtagtagttgaatagaagtggttctttaatct 7013946  T
Q  119 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatatttgagtttatattggaatgggtgaagtttagctggtattagtattca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| | |||||||| |||||||||||||||    
T  7013945 tggtgtgttgtgggcaagttttaaagatcttacttaagatgatcaaattatagttgagtttatgttgaaatggttaaagtttagatggtattagtattca 7013846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 2334367 - 2334269
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat-cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| ||||| ||| |||||||||||| | ||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||    
T  2334367 gacactcctcggattagacgtgtttcagtgtcggacatgtgtcgtgtccgacacgacacgacaccgacacttgtaattacactaaattatgtgattttt 2334269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 7063285 - 7063227
Alignment:
Q  51 tgaattactgtcaagagagcatattttgcaatgaatgtagtagttgaataaaagtgctt 109  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7063285 tgaataactgtcaagagagcatattttgcaatgaacgtagtagttgaataaaagtgctt 7063227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 294 - 389
Target Start/End: Complemental strand, 24339758 - 24339661
Alignment:
Q  294 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||| |  ||||||| | || | ||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  24339758 cactcctcggattaggcgtgtcccggtgtcggatacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 24339661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 5409783 - 5409876
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  ||||||||| || | ||||||||    |||||||||||||||||| ||| ||||||||||||||||||||    
T  5409783 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga----cacgacaccgacacttgtaattgcactgaattatgtgattttt 5409876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 9778612 - 9778519
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| |||||||||||||| |  ||||||||| || ||||||||||    |||||||||||||||||| |||| |||||||||||||||||||    
T  9778612 gacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccga----cacgacaccgacacttgtaattatactgaattatgtgattttt 9778519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 18039063 - 18039018
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18039063 cgacacgacaccgacacttgtaattacactgaattatgtgattttt 18039018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 13770803 - 13770710
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| |||||||||||||||  |  ||||||||| || ||||||||||    ||||||| |||||||||| ||||||||||||||||| ||||||    
T  13770803 gacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccga----cacgacaacgacacttgtaattacactgaattatgtaattttt 13770710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 20549896 - 20549848
Alignment:
Q  294 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga 342  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  20549896 cactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccga 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 389
Target Start/End: Original strand, 32093967 - 32094060
Alignment:
Q  293 acactcctcggattaggcgtgtctcaa-tgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||| |   ||||||||| || | ||||||||    ||||||||||||| |||| ||||||||||||||||||||||||    
T  32093967 acactcctcggattaggcgtgtccccggtgtcggacacgtgtcgtgtccga----cacgacaccgacatttgtaattacactgaattatgtgattttt 32094060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 21560563 - 21560522
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  21560563 acgacaccgacacttgtaattacactgaattatgtgattttt 21560522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 26033456 - 26033501
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||    
T  26033456 cgacacgagaccgacacttgtaattacactgaattatgtgattttt 26033501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 43027416 - 43027509
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| |||||||||||||||| |  ||||||||| || | |||||     ||||||||||||||||||||  |||||||| ||||||||||||||    
T  43027416 gacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtc----tgacacgacaccgacacttgtatttacactgcattatgtgattttt 43027509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 1885635 - 1885592
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  1885635 acacgacaccgacacttgtgattacattgaattatgtcattttt 1885592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 388
Target Start/End: Complemental strand, 27945104 - 27945061
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||||||| ||||||||||||||||| |||||    
T  27945104 gacacgacaccgacacttgtaattacactgaattatgtaatttt 27945061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 388
Target Start/End: Complemental strand, 32308237 - 32308140
Alignment:
Q  293 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||  |||||||  |||||||||||| | |||||| |   ||||||||||| ||||| |   |||||||||||||||||||||||    
T  32308237 acactcctcggattagctgtgtctcggtgtcggacatgtgtcgtgtccaacaccgacacgacactgacacatacaattacactgaattatgtgatttt 32308140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 3991384 - 3991343
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  3991384 acgacaccgacacttgtaattatactgaattatgtgattttt 3991343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Complemental strand, 7063222 - 7063173
Alignment:
Q  177 tttatattggaatgggtgaagtttagctggtattagtattcatgattaga 226  Q
    ||||||||||||||| | |||||||  |||||||||||||||||||||||    
T  7063222 tttatattggaatggttaaagtttaaatggtattagtattcatgattaga 7063173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 7438770 - 7438725
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||||    
T  7438770 cgacatgacaccgacacttgtaattacattgaattatgtgattttt 7438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 9408333 - 9408374
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  9408333 acgacaccgacacttgtaattacactaaattatgtgattttt 9408374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 22602704 - 22602749
Alignment:
Q  343 tcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||||| | | |||||||||||||||||||||||    
T  22602704 tcgacacgacaccgacacatataattacactgaattatgtgatttt 22602749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 25822773 - 25822685
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaatt 378  Q
    |||||||||  |||||||| |||| | ||||| |||| || | |||||||||  ||| ||||||||||||||||| |||||||||||||    
T  25822773 gacactccttagattaggcatgtcccgatgtcagacacgtgtcgtgtccgataccgatacgacaccgacacttgtaattacactgaatt 25822685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 11272581 - 11272617
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattat 380  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11272581 cgacacgacaccgacacttgtaattacactgaattat 11272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 18215182 - 18215226
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||    
T  18215182 gacacgacaccgacacttgtaactacactgcattatgtgattttt 18215226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 25481961 - 25481921
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  25481961 cgacaccaacacttgtaattacactgaattatgtgattttt 25481921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Complemental strand, 21880211 - 21880172
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  21880211 cgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Complemental strand, 25956504 - 25956465
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  25956504 cgacaccgacacttgtgattacattgaattatgtcatttt 25956465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 15680868 - 15680828
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | |||||||| |||||||||||||||    
T  15680868 cgacaccgacacttataattacactaaattatgtgattttt 15680828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 17257985 - 17258029
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||| ||||||||||||| |||||||| |||||||||| ||||||    
T  17257985 gacatgacaccgacacttatgattacattgaattatgttattttt 17258029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 19213862 - 19213822
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||  |||||||| ||||||||||||||    
T  19213862 cgacaccgacacttgtatttacactgcattatgtgattttt 19213822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Complemental strand, 19992061 - 19992021
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  19992061 acgacaccgacacttataattacactgaaatatgtgatttt 19992021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 3790 - 3889
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccg--atcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||||| ||||||||||||| | |||||||  | | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  3790 gacactcctcggattaggcgtgtctcgatgtcggacatgtgtcgtgtccgacaccaacacgacactgacacttgtaattacactgaattatgtgattttt 3889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 47989615 - 47989516
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| | ||||| ||||||| | ||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  47989615 gacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 47989516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 293 - 389
Target Start/End: Complemental strand, 5944400 - 5944302
Alignment:
Q  293 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccg--atcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| || |  |||||||||||| |||||||||  ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  5944400 acactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacactgaattatgtgattttt 5944302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 389
Target Start/End: Original strand, 1486655 - 1486749
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||||| |  ||||||||| || | ||||||||    |||||||||||||||| | ||||||||||||||||||||||||    
T  1486655 agacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga----cacgacaccgacacttataattacactgaattatgtgattttt 1486749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 6612112 - 6612211
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| ||||||||||||||    |||||||||  | | ||||||||  |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  6612112 gacactccttggattaggcgtgtcctggtgtcggacacatatcgtgtccgacatcgacacgacaccgacacttgtaattacactgaattatgtaattttt 6612211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 31694651 - 31694750
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||||||||||  |  ||||| | |||| ||||||||||   ||||||||||||||||||||| |||| |||||||||||||||||||    
T  31694651 gacactcctcagattaggcgtgttccggtgtcgaatatgtgttgtgtccgacaccgacacgacaccgacacttgtaattatactgaattatgtgattttt 31694750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 24577182 - 24577226
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  24577182 gacacgacaccgacacttgtaattacactgaattatgtgattttt 24577226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 113363 - 113318
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||    
T  113363 cgacacgacacctacacttgtaattacactgaattatgtgattttt 113318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 18337436 - 18337348
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| |||| |||| || ||||||||| || ||||||||||         ||||||||||||| ||||||||||||||||||||||||    
T  18337436 gacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccga---------caccgacacttgtaattacactgaattatgtgattttt 18337348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 22515839 - 22515927
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||||||  ||||||| |||| | ||||||||         ||||||||||||| |||||||| |||||||||||||||    
T  22515839 gacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccga---------caccgacacttgtaattacactaaattatgtgattttt 22515927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 1704988 - 1705032
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  1704988 gacacgacaccgacacttgtaattaccctgaattatgtgattttt 1705032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 300 - 389
Target Start/End: Original strand, 30173711 - 30173802
Alignment:
Q  300 tcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||| |||||||||||  |  ||||||||||| | |||||||||   |||||||||||||||||||| |||||||||| |||||| ||||||    
T  30173711 tcgggttaggcgtgtcctagagtcggacatgtgtcgtgtccgatacggacacgacaccgacacttgtaattacactgagttatgtaattttt 30173802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 51410084 - 51410044
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  51410084 cgacaccgacacttgtaattacactgaattatgtgattttt 51410044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 389
Target Start/End: Complemental strand, 1815315 - 1815276
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttt 1815276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 6332732 - 6332689
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||||| ||||||||||||||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgattttt 6332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 9629869 - 9629939
Alignment:
Q  320 tgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||| | ||||||||  |||||||||||||||||||| | || |||||||||||| |||||||    
T  9629869 tgtcggacatgtgtcgtgtccgacatcgacacgacaccgacacttataatcacactgaattatatgatttt 9629939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 388
Target Start/End: Original strand, 20157346 - 20157389
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||| | |||||||||||||||||||||||||    
T  20157346 gacacgacaccgacacatatgattacactgaattatgtgatttt 20157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 389
Target Start/End: Original strand, 40258934 - 40258973
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttt 40258973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 5376493 - 5376539
Alignment:
Q  342 atcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  5376493 atcgacacgacaccgacacttttaattacactgaattatgttatttt 5376539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 35919271 - 35919316
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||||    
T  35919271 cgacacgacacggacacttataattacactgaattatgtgattttt 35919316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 6427582 - 6427483
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| || ||||||||||||| |  ||||||||| || | ||||||||   | ||||||||| |||||||||  ||||| |||||||||||||||||    
T  6427582 gacactcatcagattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacgcctacacgacactgacacttgtagttacattgaattatgtgattttt 6427483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 22881616 - 22881656
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  22881616 cgacaccgacacttgtaattacactaaattatgtgattttt 22881656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 38078661 - 38078701
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  38078661 cgacaccgacacttgtaattacattgaattatgtgattttt 38078701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 42359449 - 42359489
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttt 42359489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 44482294 - 44482250
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||| | | |||||||||||||||||||||||    
T  44482294 cgacacgacaccgacacatataattacactgaattatgtgatttt 44482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Original strand, 28273089 - 28273128
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttt 28273128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 28663674 - 28663627
Alignment:
Q  342 atcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  28663674 atcgatacgacaccgacacttgtaattacatagaattatgtgattttt 28663627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 383
Target Start/End: Complemental strand, 2218302 - 2218264
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtg 383  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  2218302 gacacgacaccgacacttgtaattacactaaattatgtg 2218264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 21378635 - 21378597
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttt 21378597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 25272544 - 25272502
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||| | |||||||| ||||||||||||||    
T  25272544 acacgacaccgacacttataattacactaaattatgtgatttt 25272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 388
Target Start/End: Complemental strand, 31015097 - 31015063
Alignment:
Q  354 ccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||| |||||||||||||||||||||||    
T  31015097 ccgacacttgtaattacactgaattatgtgatttt 31015063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 34371775 - 34371733
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  34371775 acacgacaccgacacatataattacactgaattatgtgatttt 34371733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 342
Target Start/End: Complemental strand, 37598938 - 37598888
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga 342  Q
    |||||||||||||||||||||||| || ||||||||| || | ||||||||    
T  37598938 gacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccga 37598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Original strand, 15449231 - 15449272
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  15449231 acgacacagacacttgtaattacactaaattatgtgattttt 15449272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 19058856 - 19058889
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgt 382  Q
    |||||||||||||||| |||||||||||||||||    
T  19058856 cgacaccgacacttgtaattacactgaattatgt 19058889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 40917867 - 40917779
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaatt 378  Q
    |||| ||||||||||||||||||| |  ||||||||| || | |||||| |   |||||||||||||| |||||| |||||||| ||||    
T  40917867 gacagtcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgacaccgagacttgtaattacacttaatt 40917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 389
Target Start/End: Complemental strand, 18471355 - 18471319
Alignment:
Q  353 accgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||| |||||||||||||||||||    
T  18471355 accgacacttgtaattatactgaattatgtgattttt 18471319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 21621014 - 21620974
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||| | ||||||||||||||||||||||    
T  21621014 cgacaccgacgcttgtaaatacactgaattatgtgattttt 21620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Original strand, 24334705 - 24334737
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatg 381  Q
    |||||||||||||||| ||||||||||||||||    
T  24334705 cgacaccgacacttgtaattacactgaattatg 24334737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 25361950 - 25361906
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||| ||||| | | |||||||||||||||||||||||    
T  25361950 cgacacgacactgacacatataattacactgaattatgtgatttt 25361906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 31672895 - 31672935
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| |||||| |||||||||||||| |||||||||    
T  31672895 cgacaccgagacttgtaattacactgaattaagtgattttt 31672935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 32461405 - 32461503
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| || |||||||||||||| || |||| |||| || | ||||||||   |||||| ||||| |||||||| |||||| | |||||||||||||||    
T  32461405 gacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacac-acaccaacacttgtaattacattaaattatgtgattttt 32461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 388
Target Start/End: Complemental strand, 38503436 - 38503340
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||| |||||||||||| ||||| |   ||| ||||||| |  ||||||| ||||| ||||||||||| | | ||||||||||| ||| |||||||    
T  38503436 gacacacctcggattaggtgtgtccctgcgtcagacatgtgtcatgtccgaccgacaggacaccgacacatataattacactgaaatatatgatttt 38503340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 46348383 - 46348423
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||| ||||||||    
T  46348383 cgacaccgacacttgtaattacactaaattatatgattttt 46348423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 7e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 8365463 - 8365555
Alignment:
Q  295 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    ||||||||||||||||||||| || ||||||||| || | |||||||||  ||||||||||||||||||||| ||||||| ||||||||||||    
T  8365463 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaattatgtgat 8365555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 300 - 389
Target Start/End: Complemental strand, 16766807 - 16766716
Alignment:
Q  300 tcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |  ||||||||| || ||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  16766807 tcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgtgattttt 16766716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 5970040 - 5970148
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattat 380  Q
    |||| ||||| ||||||||||||| |||||||| | |||||||| |||| | ||||||||   |||||||||||| ||| |||| |||||||||||||||    
T  5970040 tgaagcatagtcactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattat 5970139  T
Q  381 gtgattttt 389  Q
    |||||||||    
T  5970140 gtgattttt 5970148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 389
Target Start/End: Complemental strand, 8714099 - 8713999
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||| |||||||| | |||||||| |||| | ||||||||   |||||||||||| ||| |||| |||||||||||||||||||||||    
T  8714099 agacactcctcggattgggcgtgtcccgatgtcggaaatgtgtcgtgtccgacaccgacacgacacccacatttgtaattacactgaattatgtgatttt 8714000  T
Q  389 t 389  Q
    |    
T  8713999 t 8713999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 388
Target Start/End: Complemental strand, 9629510 - 9629403
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga-tcgaca-cgacaccgacacttgtgattacactgaattat 380  Q
    |||| ||| ||||||||||||||||| ||||||||| |||||||||  | ||||||||||  ||||| |||||||||||| | | |||||| ||||||||    
T  9629510 tgaagcatggacactcctcggattagacgtgtctcagtgtcggacacatgttgtgtccgacacgacaccgacaccgacacatataattacattgaattat 9629411  T
Q  381 gtgatttt 388  Q
    ||||||||    
T  9629410 gtgatttt 9629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 294 - 389
Target Start/End: Original strand, 9107313 - 9107410
Alignment:
Q  294 cactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||| |  |||||||||    ||||||||||   ||||||||||||||||||||| ||||||||||||| ||||||||||    
T  9107313 cactcctcggattaggtgtgtcccggtgtcggacacacgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaattttgtgattttt 9107410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 10770670 - 10770714
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  10770670 gacacgacaccgacacttgtaattacactgaattatgtgattttt 10770714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 9522999 - 9522910
Alignment:
Q  302 ggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||  ||||||||| || | |  |||||   |||||| |||||||||||||| ||||||||||||||||||||||||    
T  9522999 ggattaggcgtgtctcggtgtcggacacgtgtcggatccgacaccgacacaacaccgacacttgtaattacactgaattatgtgattttt 9522910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 345 - 387
Target Start/End: Original strand, 9911524 - 9911566
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  9911524 gacacgacaccgacacttgtaattacactgaattatgtgattt 9911566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 31385037 - 31384939
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat-cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| |||||||||||||| |  ||| ||||| || | |||||| |  | ||||||||| ||||||||| ||||||||||||||||||||||||    
T  31385037 gacactccttggattaggcgtgtcccggtgtaggacacgtgtcgtgtccaacactacacgacactgacacttgtaattacactgaattatgtgattttt 31384939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 19369882 - 19369837
Alignment:
Q  343 tcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||    
T  19369882 tcgacacgacaccgacacttgtgattacattgaattatgtcatttt 19369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 10339066 - 10339165
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccg--atcgacacgacaccgacacttgtgatt-acactgaattatgtgatttt 388  Q
    |||||||||| ||||||||||||| || |||||||||||| | |||||||  | ||||||| ||| ||||| | | ||| ||||||||||||||||||||    
T  10339066 gacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacacggcactgacacatataattaacactgaattatgtgatttt 10339165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 26402680 - 26402720
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  26402680 cgacaccgacacttgtgattacactgaattatgtcattttt 26402720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 28152157 - 28152117
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  28152157 cgacaccgacacttgtaattacactgaattatgtgattttt 28152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 34595193 - 34595153
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  34595193 cgacaccgacacttgtaattacactgaattatgtgattttt 34595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 785450 - 785488
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  785450 cgacacgacaccgacacttgtgattacattgaattatgt 785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 12696388 - 12696343
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| ||||||||| ||||||||||||||||| ||||||    
T  12696388 cgacacgacactgacacttgtaattacactgaattatgtaattttt 12696343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 17841541 - 17841629
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||||||| |||||||||  | | |||||         |||||||| ||||||| |||||||| |||||||||||||||    
T  17841541 gacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtc---------cgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 7801156 - 7801196
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttt 7801196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 7977830 - 7977870
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  7977830 cgacaccgacacttgtaattacactgaattatgtaattttt 7977870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 8776920 - 8777013
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| |||||||  ||||||||| || | |||||   ||    ||||||| |||||||| ||||||||||||| ||||||||||    
T  8776920 gacactcctcggattaggtgtgtctcggtgtcggacacgtgtcgtgtcgtgtc----cgacaccaacacttgtaattacactgaattttgtgattttt 8777013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 28715354 - 28715314
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  28715354 cgacaccgacacttgtaattacactgaattatgtcattttt 28715314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Original strand, 6751882 - 6751921
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  6751882 cgacaccgacacttgtgattacattgaattatgtcatttt 6751921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 388
Target Start/End: Original strand, 9025490 - 9025533
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||| | | |||||||||||||||||||||||    
T  9025490 gacacgacaccgacacatataattacactgaattatgtgatttt 9025533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 16833365 - 16833327
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttt 16833327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 13360325 - 13360362
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacat 329  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  13360325 gacactcttcggattaggcgtgtctcagtgtcggacat 13360362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 21395304 - 21395341
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  21395304 gacacgacaccgacacttgtaattacactaaattatgt 21395341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 403864 - 403904
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||  ||||||| |||||||||||||||    
T  403864 cgacaccgacacttgtagttacactaaattatgtgattttt 403904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 426514 - 426554
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||| | |||||||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttt 426554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 853859 - 853899
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||| |||| |||||||||||||||    
T  853859 cgacaccgacacttgtaattgcacttaattatgtgattttt 853899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 1700411 - 1700371
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | ||||||||||| ||||||||||||    
T  1700411 cgacaccgacacttataattacactgaaatatgtgattttt 1700371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 3209441 - 3209401
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| || ||||| |||||||||||||||    
T  3209441 cgacaccgacacttgtaataacactaaattatgtgattttt 3209401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 7027301 - 7027261
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| | | ||||||||||||||||||||||||    
T  7027301 cgacaccgacacatataattacactgaattatgtgattttt 7027261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 7930368 - 7930324
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||  ||| |||| |||||||||||||||    
T  7930368 gacacgacaccgacacttgaaatttcactaaattatgtgattttt 7930324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 17302620 - 17302576
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||  ||||||||| |||||| |||||||||||||||||    
T  17302620 gacacgacaatgacacttgtaattacattgaattatgtgattttt 17302576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 376
Target Start/End: Complemental strand, 22746021 - 22745989
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaa 376  Q
    |||||||||||||||||||||||||||| ||||    
T  22746021 cgacacgacaccgacacttgtgattacattgaa 22745989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 26562753 - 26562709
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||| |||||| | | |||||||||||||||||||||||    
T  26562753 cgacacgacatcgacacatataattacactgaattatgtgatttt 26562709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 32978899 - 32978939
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  32978899 cgacaccgacacttgtaattacacttaattatgtgtttttt 32978939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 39698659 - 39698560
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||||||  ||||||| |  | | ||||||||   ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  39698659 gacactcctcggattaggcgtgtctcggtgtcggatacatgtcgtgtccgacaccgacacgacactgacacttgtaattacactgaattatgtgattttt 39698560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 31084435 - 31084342
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| |||| || ||||||||| || | ||||||||    ||||||| |||||||||| |||||| |||||||||||||||||    
T  31084435 gacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccga----cacgacatcgacacttgtaattacattgaattatgtgattttt 31084342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 296 - 389
Target Start/End: Complemental strand, 7677819 - 7677724
Alignment:
Q  296 ctcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| |  ||||||||||||   ||||| ||   ||||||||||||||||||| | ||| ||||||||||||||||||||    
T  7677819 ctcctcggattaggcgtgtcccggtgtcggacatgtgacgtgtcagacaccgacacgacaccgacacttctaattgcactgaattatgtgattttt 7677724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 23015936 - 23016028
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||||||||||| ||||||||||||  | | |||||||||    || ||| |||||| | | |||||||||||||||||||||||    
T  23015936 gacactcctcggattaggcgtgtcccaatgtcggacacatgtcgtgtccgat----acaacatcgacacctataattacactgaattatgtgatttt 23016028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 15382592 - 15382498
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||||| | |||||| |   || |||||||||||||||| |||| |||||||||| ||||||||    
T  15382592 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaac--ac-cgacaccgacacttgtaattatactgaattatatgattttt 15382498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 21191008 - 21191096
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |   |||||||| || ||||||||||         ||||||||||||| ||||||||||||||||||||||||    
T  21191008 gacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccga---------caccgacacttgtaattacactgaattatgtgattttt 21191096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 382
Target Start/End: Complemental strand, 21542148 - 21542056
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||| |||| ||||| |||||||| |  ||||||||| || | ||||||||   ||||||||||||||||||||| |||||||||||||||||    
T  21542148 gacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaattatgt 21542056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 6247681 - 6247641
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  6247681 cgacaccgacacttgtaattacactgaattatgtgattttt 6247641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 13287395 - 13287439
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  13287395 gacacgacaccgacacttgtagttacactgaattatgtgattttt 13287439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 15884047 - 15884007
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  15884047 cgacaccgacacttgtaattacactgaattatgtgattttt 15884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 21522868 - 21522769
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| | |||||||||||||| |  || |||||| || | ||||||||   |||||||||||||||| |||| ||||||||||||||||| ||||||    
T  21522868 gacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21522769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 21533434 - 21533335
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| | |||||||||||||| |  || |||||| || | ||||||||   |||||||||||||||| |||| ||||||||||||||||| ||||||    
T  21533434 gacactctttggattaggcgtgtcccggtgccggacacgtgtcgtgtccgacaccgacacgacaccgacaattgtaattacactgaattatgttattttt 21533335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 388
Target Start/End: Complemental strand, 19579818 - 19579721
Alignment:
Q  293 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc--gacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||||| |  |||  ||||| | | ||||||||    |||||||||||||||||||| ||| |||| ||||||||||||||    
T  19579818 acactcctcggattaggcgtgtcccggtgttagacatatgtcgtgtccgacactgacacgacaccgacacttgtaattgcactaaattatgtgatttt 19579721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 21351900 - 21351945
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  21351900 cgacatgacaccgacacttgtaattacactgaattatgtgactttt 21351945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 21576697 - 21576785
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| || |||| |||| || | ||||||||         || |||||||||| ||||||||||||||||||||||||    
T  21576697 gacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccga---------catcgacacttgtaattacactgaattatgtgattttt 21576785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 291 - 385
Target Start/End: Complemental strand, 30183668 - 30183572
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    ||||||| |||| |||||||||||| || ||||||||| || | ||||| |||  | ||||||||||||||||||| |||| || |||| |||||||    
T  30183668 agacacttctcgaattaggcgtgtcccagtgtcggacacgtgtcgtgtctgataccaacacgacaccgacacttgtaattaaaccgaataatgtgat 30183572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 328
Target Start/End: Original strand, 32630678 - 32630723
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggaca 328  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||||    
T  32630678 tgaagcatagacactcctcgaattaggtgtgtctcaatgtcggaca 32630723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 37328839 - 37328884
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||||    
T  37328839 cgacacgacaccgacacatgtaattacactgaattttgtgattttt 37328884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 33178084 - 33178044
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  33178084 cgacaccgacacttgtaattacactaaattatgtgattttt 33178044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Complemental strand, 2548446 - 2548407
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  2548446 cgacaccgacacttatgattacactgaattatgtaatttt 2548407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 12199992 - 12199949
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| |||  |||||||||||||||||||    
T  12199992 acacgacaccgacacttgtaattgtactgaattatgtgattttt 12199949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Original strand, 19028999 - 19029038
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  19028999 gacacagacacttgtgattacactggattatgtgattttt 19029038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Complemental strand, 42893418 - 42893379
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttt 42893379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 387
Target Start/End: Original strand, 7218271 - 7218305
Alignment:
Q  353 accgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||||| ||||||||||||||||||||||    
T  7218271 accgacacttgtaattacactgaattatgtgattt 7218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 8420086 - 8420046
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||| |||||||||| ||||||    
T  8420086 cgacaccgacacttgtaattacattgaattatgttattttt 8420046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 16374338 - 16374382
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||| |||||||||| |||||| ||||||    
T  16374338 gacacgacaccgacacatgtaattacactgatttatgttattttt 16374382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Complemental strand, 17123154 - 17123107
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 340  Q
    |||||||||||||||||||||||| |  |||||||||||||| ||||||    
T  17123154 gacactcctcggattaggcgtgtc-ccgtgtcggacatgtttcgtgtcc 17123107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 389
Target Start/End: Original strand, 24906305 - 24906341
Alignment:
Q  353 accgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttt 24906341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 30135377 - 30135333
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||| ||||||||||||||| |||||| ||| |||||||||||||    
T  30135377 gacatgacaccgacacttgtaattacaatgagttatgtgattttt 30135333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 328
Target Start/End: Original strand, 39268550 - 39268586
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggaca 328  Q
    |||||||||||||||||||||||| || |||||||||    
T  39268550 gacactcctcggattaggcgtgtcccagtgtcggaca 39268586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 43564940 - 43564900
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | |||||||| |||||||||||||||    
T  43564940 cgacaccgacacttataattacactaaattatgtgattttt 43564900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 41961591 - 41961686
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    |||||| ||||||||||||||||| || ||||||||| || | |||||||||  ||||||||||||||||||||| ||||||| |||| |||||||    
T  41961591 gacacttctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacacgacaccgacacttgtaattacaccgaataatgtgat 41961686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 49651728 - 49651826
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatc-gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| ||||||||||| ||||| |  ||||||| |||| | ||||||| || |||||||||||||||||||| |||||| |||||||||||||||||    
T  49651728 gacacttctcggattaggtgtgtcccggtgtcggatatgtgtcgtgtccggtccgacacgacaccgacacttgtaattacagtgaattatgtgattttt 49651826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 4987232 - 4987331
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  ||||||||| || | |||||| |   ||||||| |||| |||||||| ||||||||||||||||||||||||    
T  4987232 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccaacaccgacacgtcaccaacacttgtaattacactgaattatgtgattttt 4987331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 34185064 - 34185163
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||  | |  |||||||  | |||||||||||||||||||| ||||||||||||| ||||||||||    
T  34185064 gacactcctcggattaggcgtgtcccggtgtcggacacatgtcttgtccgacatggacacgacaccgacacttgtaattacactgaattgtgtgattttt 34185163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 291 - 387
Target Start/End: Complemental strand, 28812634 - 28812536
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||||||||||||||||||    |||||||||||| | ||||| ||   | ||||||||||||||||||| | ||||||||||||||||||||    
T  28812634 agacactcctcggattaggcgtgtcctgctgtcggacatgtatcgtgtctgacaccaacacgacaccgacacttgtaactacactgaattatgtgattt 28812536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 28918110 - 28918020
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| |||||||||||||| || ||||||||| || | ||||||       ||||||||||||||||| ||||||||||||||||||||||||    
T  28918110 gacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtcc-------acgacaccgacacttgtaattacactgaattatgtgattttt 28918020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 295 - 389
Target Start/End: Complemental strand, 10955056 - 10954971
Alignment:
Q  295 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| || ||||||||| || | ||||||||         ||||||||||||||||||||||||||||||||||||||    
T  10955056 actcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga---------caccgacacttgtgattacactgaattatgtgattttt 10954971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 27505358 - 27505265
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| |||| |  ||||||||| || | |||||     |||||||||||||||||||| |||||||| |||||||||||||||    
T  27505358 gacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtc----agacacgacaccgacacttgtaattacacttaattatgtgattttt 27505265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 14209177 - 14209132
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  14209177 cgacacgacactgacacttgtaattacactgaattatgtgattttt 14209132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 55401182 - 55401094
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||||||||  ||||||||| || | ||||||||         ||||||||||||| |||||||| |||||||||||||||    
T  55401182 gacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccga---------caccgacacttgtaattacactaaattatgtgattttt 55401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 14832205 - 14832118
Alignment:
Q  304 attaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |  ||||||||| || | |||||||||  ||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  14832205 attaggcgtgtcccggtgtcggacacgtgtcgtgtccgataccgacacgacactgacacttgtaattacattgagttatgtgattttt 14832118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 40993278 - 40993375
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||| ||| |||||||||||||||||||||||| |  |||||||||||| | |||||         |||||||||||| | | |||||||||||||||||    
T  40993278 tgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtc---------cgacaccgacacatataattacactgaattatgt 40993368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 1509599 - 1509558
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  1509599 acgacaccgacacttgtaattacactaaattatgtgattttt 1509558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 14829753 - 14829708
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||    
T  14829753 cgacacgacaccgacacttgtaattaccatgaattatgtgattttt 14829708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 25775568 - 25775531
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatt 386  Q
    |||||||||||||||| |||||||||||||||||||||    
T  25775568 cgacaccgacacttgtaattacactgaattatgtgatt 25775531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 25948882 - 25948927
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  25948882 cgacacgacaccaacacttataattacactgaattatgtgattttt 25948927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 26508166 - 26508129
Alignment:
Q  352 caccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttt 26508129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 34910377 - 34910336
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  34910377 acgacaccgactcttgtaattacactgaattatgtgattttt 34910336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 8587021 - 8587061
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttt 8587061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 8593196 - 8593156
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  8593196 cgacaccgacacttgtaattatactgaattatgtgattttt 8593156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 51206353 - 51206393
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  51206353 cgacaccgacacttgtatttacactgaattatgtgattttt 51206393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 15796291 - 15796334
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| |||| ||||||||||||||| ||||||||    
T  15796291 acacgacaccgacaattgtaattacactgaattatatgattttt 15796334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 4990964 - 4991006
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||| ||||||||||| ||||||||||||||||| |||||    
T  4990964 acacgacgccgacacttgtaattacactgaattatgtaatttt 4991006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 20503522 - 20503484
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttt 20503484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 389
Target Start/End: Original strand, 21256984 - 21257026
Alignment:
Q  347 cacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| |||||||||||| |||| |||||||||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttt 21257026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 35994744 - 35994778
Alignment:
Q  355 cgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||||||||||||||||||||||    
T  35994744 cgacacttgtaattacactgaattatgtgattttt 35994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 302 - 389
Target Start/End: Complemental strand, 55213070 - 55212982
Alignment:
Q  302 ggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| |||||||||  ||||||||| || ||||| ||||   |||||| |||||||||||||| ||| |||| |||||||||||||||    
T  55213070 ggattatgcgtgtctcggtgtcggacacgtgttgtgcccgacaccgacac-acaccgacacttgtaattgcactaaattatgtgattttt 55212982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 3164020 - 3164065
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| | ||||||||  |||||||||||||||||||||||    
T  3164020 cgacacgacatcaacacttgttcttacactgaattatgtgattttt 3164065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 6525635 - 6525683
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 340  Q
    |||||||||||||||||| |||||||  | |||||||||| ||||||||    
T  6525635 gacactcctcggattaggtgtgtctcggtatcggacatgtgttgtgtcc 6525683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 7928509 - 7928469
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| | | ||||||||||||||||||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttt 7928469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 380
Target Start/End: Original strand, 8039779 - 8039866
Alignment:
Q  295 actcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattat 380  Q
    |||| |||||||| ||||||| |  |||||||||||| |  |||||||   ||||||||||||||||| | | |||||||||||||||    
T  8039779 actcttcggattaagcgtgtcccggtgtcggacatgtctcatgtccgacaccgacacgacaccgacacatataattacactgaattat 8039866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 292 - 320
Target Start/End: Complemental strand, 8842436 - 8842408
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaat 320  Q
    |||||||||||||||||||||||||||||    
T  8842436 gacactcctcggattaggcgtgtctcaat 8842408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 14747625 - 14747581
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||| ||||| |||||||| |||||||||||||||    
T  14747625 gacacgacacggacccttgtaattacactaaattatgtgattttt 14747581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 16000016 - 16000056
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||  |||||||||||||||| ||||||    
T  16000016 cgacaccgacacttgtagttacactgaattatgttattttt 16000056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 16789075 - 16789031
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| |||||| | ||||||||||||||| ||||||||    
T  16789075 gacacgacaccaacacttataattacactgaattatatgattttt 16789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 21479177 - 21479137
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||| || ||||||||||||| ||||||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttt 21479137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 39756299 - 39756255
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| |||| | | |||||||||||||||    
T  39756299 gacacgacaccgacacttgtaattatattaaattatgtgattttt 39756255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 71843 - 71744
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||||| |  ||||||||| || ||||||||||   ||||||||||| |||||| || ||||||||||||| ||||||||||    
T  71843 gacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacactgacactagtaattacactgaattgtgtgattttt 71744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 30717471 - 30717570
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| ||||||||||| || || ||||| ||| || | ||||||||   |||||||||| |||||||||| ||||||||||||||||||||||||    
T  30717471 gacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaattatgtgattttt 30717570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 37419861 - 37419762
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  ||||||||| |  | ||||||||   ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  37419861 gacactcctcggattaggcgtgtcccggtgtcggacacgcatcgtgtccgacaccgacacgacaccggcacttgtaattacactgaattttgtgattttt 37419762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 292 - 372
Target Start/End: Complemental strand, 26769629 - 26769547
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacac 372  Q
    |||||||||||||||||||||||| || ||||||||| || | |||||||||  ||||| ||||||||||||||| |||||||    
T  26769629 gacactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgataccgacatgacaccgacacttgtaattacac 26769547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 2438671 - 2438759
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||||||         ||||||||||||| ||||||||||||||||||||||||    
T  2438671 gacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccga---------caccgacacttgtaattacactgaattatgtgattttt 2438759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 15657991 - 15657883
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga--tcgacacgacaccgacacttgtgattacactgaattat 380  Q
    |||| ||| ||||||||||||| |||||||||| |   |||||||| || | | ||||||  || |||||||||||||| |||| |||||||||||||||    
T  15657991 tgaagcatggacactcctcggactaggcgtgtcccggcgtcggacacgtgtcgcgtccgacatcaacacgacaccgacatttgtaattacactgaattat 15657892  T
Q  381 gtgattttt 389  Q
    |||||||||    
T  15657891 gtgattttt 15657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 23058437 - 23058482
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||    
T  23058437 cgacacgacaccgacacttgtaattacactggattatgtgattttt 23058482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 33153488 - 33153443
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  33153488 cgacacgacacggacacttgtaattacactgaattatgtgattttt 33153443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 19536397 - 19536437
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  19536397 cgacaccgacacttgtaattacactgaattatgtgattttt 19536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 291 - 388
Target Start/End: Original strand, 34784922 - 34785021
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||| || ||||||||| |  |||| |||| || | |||||||||  ||||||||||||||||| | | |||||||| ||||||||||||||    
T  34784922 agacactcctcgaataaggcgtgtccccgtgtcagacaggtgtcgtgtccgataccgacacgacaccgacacatataattacactaaattatgtgatttt 34785021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 380
Target Start/End: Complemental strand, 35056986 - 35056896
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattat 380  Q
    |||||||||| |||||||||||| ||  ||||||||| || | ||||||||   ||||||||||||||||| | | |||||||||||||||    
T  35056986 gacactcctcagattaggcgtgtttccgtgtcggacacgtgtcgtgtccgacaccgacacgacaccgacacatataattacactgaattat 35056896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 36756284 - 36756382
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcg--acacgacaccgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||| |||||||||||||  |  |||||||||||| |||||| |||     ||||||||||||||||| | ||||||||||||||||| ||||    
T  36756284 agacactcctaggattaggcgtgttgcggtgtcggacatgtgttgtgttcgacactaacacgacaccgacacttataattacactgaattatgttattt 36756382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 342 - 388
Target Start/End: Original strand, 32749818 - 32749864
Alignment:
Q  342 atcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||| ||||||| | |||||||||||||||||||||||    
T  32749818 atcgacacgacactgacacttattattacactgaattatgtgatttt 32749864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 12668418 - 12668463
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| | ||||||||||||||||| ||||||    
T  12668418 cgacacgacaccgacacttataattacactgaattatgtcattttt 12668463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 5040793 - 5040753
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  5040793 cgacaccgacacttgtaattacattgaattatgtgattttt 5040753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 11223805 - 11223903
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||||||||||| |  |||| |||| || | ||||||||   | ||| ||||||||||||||| ||||||||||||||||| ||||||    
T  11223805 gacactcctcagattaggcgtgtcccggtgtcagaca-gtgtcgtgtccgacacctacatgacaccgacacttgtaattacactgaattatgttattttt 11223903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 385
Target Start/End: Complemental strand, 18422022 - 18421986
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgat 385  Q
    |||||||||||||||| ||||||||||||||||||||    
T  18422022 cgacaccgacacttgtaattacactgaattatgtgat 18421986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 30404850 - 30404890
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||| ||||||||||| ||||||||||||||||||||||||    
T  30404850 cgacgccgacacttgtaattacactgaattatgtgattttt 30404890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 37559036 - 37558996
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgattttt 37558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 346 - 385
Target Start/End: Complemental strand, 974809 - 974770
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  974809 acacgacaccgacacttgtaattacactgaataatgtgat 974770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 349 - 388
Target Start/End: Original strand, 43586005 - 43586044
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  43586005 cgacaccgacacttgtgattacattgaattatgtcatttt 43586044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 388
Target Start/End: Original strand, 18889592 - 18889630
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgatttt 18889630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 389
Target Start/End: Original strand, 20539672 - 20539714
Alignment:
Q  347 cacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| |||||||| |||||| ||||||||    
T  20539672 cacgacaccgacacttgtaattacactaaattatatgattttt 20539714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 4882691 - 4882736
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| |||||||||| ||||||||||||||| | ||||||    
T  4882691 cgacacgacatcgacacttgtaattacactgaattatatcattttt 4882736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 14450797 - 14450834
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  14450797 acactgacacttgtgattacattgaattatgtgatttt 14450834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 14996218 - 14996263
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||| ||||||||||||||| |||||||| |||||| ||||||||    
T  14996218 cgacaagacaccgacacttgtaattacactaaattatatgattttt 14996263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 386
Target Start/End: Complemental strand, 44635557 - 44635520
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgatt 386  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  44635557 cgacaccgacacttgtaattacactgaattacgtgatt 44635520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 15972932 - 15972892
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||| ||| ||||||    
T  15972932 cgacaccgacacttgtaattacactgaattgtgtaattttt 15972892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 381
Target Start/End: Complemental strand, 21624326 - 21624294
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatg 381  Q
    |||||||||||||||| ||||||||||||||||    
T  21624326 cgacaccgacacttgtaattacactgaattatg 21624294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 385
Target Start/End: Complemental strand, 19482785 - 19482691
Alignment:
Q  293 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    ||||||||||||||||| ||||| || ||||||||| || | |||||| ||  |||||||||||| |||||||| ||||||| ||||||||||||    
T  19482785 acactcctcggattaggtgtgtcccagtgtcggacacgtgtcgtgtccaataccgacacgacaccaacacttgtaattacaccgaattatgtgat 19482691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 16073510 - 16073413
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||| ||| ||||||||||||||||||||||||| | |||||||||||| | |||||         |||||||||||||||| ||||||||||||||||     
T  16073510 tgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtc---------cgacaccgacacttgtaattacactgaattatgc 16073420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 715557 - 715647
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| ||||||||||||||||||||||||    
T  715557 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgattttt 715647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 752883 - 752973
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| ||||||||||||||||||||||||    
T  752883 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgattttt 752973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 28084631 - 28084541
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| || ||||||||| ||     |||  | ||||||||||| ||||||||| |||||| |||||||||||||||||    
T  28084631 gacactcctcggattaggcgtgtcccagtgtcggacacgt-----gtc--accgacacgacacagacacttgtaattacattgaattatgtgattttt 28084541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 389
Target Start/End: Original strand, 28964191 - 28964288
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||| ||| |||||||||||||||||||||||| || ||||||| |||| | ||||||||         ||| ||||||||| |||||||||||||||||    
T  28964191 tgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccga---------cacagacacttgtaattacactgaattatgt 28964281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 3947713 - 3947806
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| |||||    ||||||||| || | |||||    ||||||||||| ||||||||| |||||||||||||||| |||||||    
T  3947713 gacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtc----cgacacgacactgacacttgtaattacactgaattatgcgattttt 3947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 11596348 - 11596392
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||    
T  11596348 gacacgacacctacacttgtaattacactgaattatgtgattttt 11596392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 12797338 - 12797378
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  12797338 cgacaccgacacttgtaattacactgaattatgtgattttt 12797378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 42640588 - 42640548
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  42640588 cgacaccgacacttgtaattacactgaattatgtgattttt 42640548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 30982819 - 30982917
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||| | |||||||||||||| |  ||||||||| || | ||||| ||   ||||||||||||||||||| | ||||||||||| |||||||||||    
T  30982819 gacactctttggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacgacaccgacacttataattacactgaaatatgtgatttt 30982917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 389
Target Start/End: Complemental strand, 4157552 - 4157455
Alignment:
Q  283 tgaatcatagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgt 382  Q
    |||| ||||||||||||||| ||||||||| ||||  |||||||||||| | |||||         |||||||||||||||| ||| |||| ||||||||    
T  4157552 tgaagcatagacactcctcgaattaggcgtttctcggtgtcggacatgtgtcgtgtc---------cgacaccgacacttgtaattgcactaaattatgt 4157462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 351 - 389
Target Start/End: Complemental strand, 29205501 - 29205463
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttt 29205463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 389
Target Start/End: Complemental strand, 30299008 - 30298966
Alignment:
Q  347 cacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  30299008 cacgacaccgacacttgtaattacactgaattatgtcattttt 30298966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 389
Target Start/End: Complemental strand, 30327876 - 30327834
Alignment:
Q  347 cacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| ||||||||||||||||| ||||||    
T  30327876 cacgacaccgacacttgtaattacactgaattatgtcattttt 30327834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 4383431 - 4383386
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| |||| |||| ||||||||||||||||||||||||    
T  4383431 cgacacgacactgacatttgtaattacactgaattatgtgattttt 4383386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 12895111 - 12895156
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||    
T  12895111 cgacacgacaccgacacttgtaattactttgaattatgtgattttt 12895156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 389
Target Start/End: Complemental strand, 21945614 - 21945522
Alignment:
Q  288 catagacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||||||||||||||||||||  |  |||||||||||| |  |||||||         ||||||||||||| ||||||||||||||||| ||||    
T  21945614 catagacactcctcggattaggcgtgttgcggtgtcggacatgtgtcatgtccga---------caccgacacttgtaattacactgaattatgtcattt 21945524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 23292938 - 23293026
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  ||||||||| || | ||||||||         ||||||||||||| |||| |||||||||||||||||||    
T  23292938 gacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccga---------caccgacacttgtaattatactgaattatgtgattttt 23293026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 6879465 - 6879505
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  6879465 cgacaccgacacttgtaattacacttaattatgtgattttt 6879505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 19312453 - 19312354
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| ||| |||||| ||||||||  ||||||||| || | || |||||   |||||||||||||| |||| | |||||||||||| |||||||||||    
T  19312453 gacacttctcagattagacgtgtctcggtgtcggacacgtgtcgtatccgacaacgacacgacaccgatacttataattacactgaatcatgtgattttt 19312354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 37496768 - 37496724
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||| ||||||||||||||||||||| |||||||||| |||||    
T  37496768 cgacacaacaccgacacttgtgattacattgaattatgtcatttt 37496724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 49431085 - 49431045
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  49431085 cgacaccgacacttttaattacactgaattatgtgattttt 49431045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 54580023 - 54580063
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  54580023 cgacaccgacacttataattacactgaattatgtgattttt 54580063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 331
Target Start/End: Original strand, 3064880 - 3064919
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgt 331  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  3064880 gacactcctcggattaggcgtgtctcagagtcggacatgt 3064919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 340
Target Start/End: Complemental strand, 29205574 - 29205527
Alignment:
Q  293 acactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtcc 340  Q
    ||||||||||||||||||||||| || |||||||||||| | ||||||    
T  29205574 acactcctcggattaggcgtgtcccagtgtcggacatgtgtcgtgtcc 29205527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 389
Target Start/End: Original strand, 6485613 - 6485651
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttt 6485651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 11797623 - 11797668
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| ||||||||||||||||||||| | |||||||| ||||||    
T  11797623 cgacacaacaccgacacttgtgattacattaaattatgtcattttt 11797668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 22234885 - 22234930
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |   ||||||||||||||||||||||||    
T  22234885 cgacacgacaccgacacatagaattacactgaattatgtgattttt 22234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 386
Target Start/End: Original strand, 28000738 - 28000779
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgatt 386  Q
    |||| ||||||||||||||| ||||||||||||||| |||||    
T  28000738 gacatgacaccgacacttgtaattacactgaattatatgatt 28000779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 4157208 - 4157168
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||| |||| |||||||||||||||    
T  4157208 cgacaccgacacttgtaattgcactaaattatgtgattttt 4157168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 12708210 - 12708166
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||| |||||||||| ||||||||||||||| | ||||||    
T  12708210 gacacgacatcgacacttgtaattacactgaattatttcattttt 12708166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 24613696 - 24613740
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||    
T  24613696 cgacatgacaccgacacttgtacttacattgaattatgtgatttt 24613740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 40481687 - 40481655
Alignment:
Q  357 acacttgtgattacactgaattatgtgattttt 389  Q
    |||||||| ||||||||||||||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgattttt 40481655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 8576 - 8671
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgat 385  Q
    ||||||||||| |||||||||||  || ||||||||| || | |||||||||  |||||||||||||||| |||| |||| || ||||||||||||    
T  8576 gacactcctcgaattaggcgtgtaccagtgtcggacacgtatcgtgtccgataccgacacgacaccgacatttgtaattataccgaattatgtgat 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 22652094 - 22651995
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||||| |  |||||||||  | | ||||||||   ||||||||||||||||||||| |||| | |||||||||||||||||    
T  22652094 gacactcctcggattagacgtgtcccggtgtcggacacatgtcgtgtccgacaccgacacgacaccgacacttgtaattatattgaattatgtgattttt 22651995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 25566903 - 25566860
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttt 25566860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 2572052 - 2572096
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  2572052 gacacgacaccgacacttgtaattacactaaattatgtgattttt 2572096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 4948711 - 4948671
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4948711 cgacaccgacacttgtaattacactgaattatgtgattttt 4948671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 29510245 - 29510344
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| ||||| |  ||||||||| |  | ||||||||   |||||| |||||||||||||| |||| |||||||| ||||||||||    
T  29510245 gacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacactacaccgacacttgtaattatactgaattttgtgattttt 29510344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 8343032 - 8342991
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  8343032 acgacaccgacacttgtaattacactaaattatgtgattttt 8342991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 13436959 - 13437004
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||||| |||||  |||||||||||||||||    
T  13436959 cgacacgacaccgacacttgttattaccatgaattatgtgattttt 13437004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 24858075 - 24858031
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||    
T  24858075 cgacacgacaacgacacttgt-attacactgaattatgtgattttt 24858031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Complemental strand, 40332248 - 40332211
Alignment:
Q  351 acaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||| |||||||||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgatttt 40332211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 15816070 - 15816169
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| ||||||||||||||||| |  |||||||   || | ||||||||   | ||||||||||||||||| | |||||||| |||||||||||||||    
T  15816070 gacacttctcggattaggcgtgtcccggtgtcggattcgtgtcgtgtccgacaccaacacgacaccgacacttataattacactaaattatgtgattttt 15816169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 20873128 - 20873088
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  20873128 cgacaccgacacttgtaattacactaaattatgtgattttt 20873088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 24613579 - 24613539
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  24613579 cgacaccgacacttgtaattacacttaattatgtgattttt 24613539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 11927027 - 11927125
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcgga--catgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||| |||||||||||||||||| |||| |||  |||||  ||| |   | | ||||||||||||||| | | |||||||||||||||||||||||    
T  11927027 gacactcatcggattaggcgtgtctcgatgttggatacatgtcgtgtatgacaccaacacgacaccgacacatataattacactgaattatgtgatttt 11927125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Complemental strand, 31557054 - 31557015
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtgattttt 31557015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Complemental strand, 18407772 - 18407738
Alignment:
Q  355 cgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| ||||||||||||||||||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgattttt 18407738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 387
Target Start/End: Complemental strand, 24669492 - 24669454
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattt 387  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaattt 24669454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 8343376 - 8343335
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttt 8343335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Original strand, 17468503 - 17468548
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||||||| ||||||| | ||||||||||||||    
T  17468503 cgacacgacaccaacacttgtaattacaccgcattatgtgattttt 17468548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 5307123 - 5307079
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||| ||||| || |||||||||| ||||||    
T  5307123 gacacgacaccgacacttatgatttcattgaattatgtcattttt 5307079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 22596053 - 22596013
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| |||||||| ||||||||||||||||| ||||||    
T  22596053 cgacaccaacacttgtaattacactgaattatgttattttt 22596013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 26902174 - 26902214
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||| | | |||||||||||||||||||||||    
T  26902174 acgacaccgacacatataattacactgaattatgtgatttt 26902214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 29447105 - 29447149
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||| |||||||||||||||  ||||| ||||||||||||||||    
T  29447105 cgacatgacaccgacacttgtagttacattgaattatgtgatttt 29447149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 385
Target Start/End: Original strand, 30077387 - 30077423
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgat 385  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  30077387 cgacacggacacttgtaattacactgaattatgtgat 30077423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 30271287 - 30271331
Alignment:
Q  345 gacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||| | ||||||| ||||||||| ||||||||||||||    
T  30271287 gacacgacactggcacttgtaattacactgcattatgtgattttt 30271331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 36450754 - 36450794
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| |||||||| ||||||||||||| ||||||||||    
T  36450754 cgacacctacacttgtaattacactgaattctgtgattttt 36450794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 389
Target Start/End: Original strand, 4833 - 4923
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||| |  |||||||||||| | ||||       ||| |||||| |||||||| ||||||||||||||||||||||||    
T  4833 gacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgt-------acaagacaccaacacttgtaattacactgaattatgtgattttt 4923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 23832 - 23789
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  23832 acacgacaccgacacttgtaattacactgaattatgtgattttt 23789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 335 - 389
Target Start/End: Complemental strand, 20245 - 20191
Alignment:
Q  335 gtgtccgatcgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||    
T  20245 gtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttt 20191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 23484 - 23439
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  23484 cgacacgacaccgacacttataattacactgaattatgtgattttt 23439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 23571 - 23530
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||| ||||||| | ||||||||||||||||||||||||    
T  23571 acgacactgacacttataattacactgaattatgtgattttt 23530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 3046 - 2947
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||||||||||  |  ||||| ||| || | ||||| |||  ||||||||||| || |||||| |||||||| |||||||||||||||    
T  3046 gacactcctcggattaggcgtgttccggtgtcgaacacgtgtcgtgtctgataccgacacgacactgatacttgtaattacactaaattatgtgattttt 2947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 292 - 389
Target Start/End: Complemental strand, 241712 - 241613
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||| ||||||||||||||||| |  ||||||||| || | ||||||||   | ||||||||||||||||  | |||||||| |||||||||||||||    
T  241712 gacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacacgacaccgacactcataattacactaaattatgtgattttt 241613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 342
Target Start/End: Original strand, 4987 - 5038
Alignment:
Q  291 agacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccga 342  Q
    |||||||||||||||||||| ||||||||||||||||| || | ||||||||    
T  4987 agacactcctcggattaggcatgtctcaatgtcggacacgtgtcgtgtccga 5038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 389
Target Start/End: Complemental strand, 130538 - 130501
Alignment:
Q  352 caccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttt 130501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Original strand, 462 - 502
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  462 cgacaccgacacttgtaattacactgaattttgtgattttt 502  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 53244 - 53200
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||    
T  53244 cgacacggcaccgacacttataattacactgaattatgtgatttt 53200  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 46741 - 46701
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttt 46701  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 386
Target Start/End: Complemental strand, 123686 - 123650
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgatt 386  Q
    ||||||||||||||| |||||||||||||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgatt 123650  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 389
Target Start/End: Complemental strand, 83220 - 83179
Alignment:
Q  348 acgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||| |||| ||||||||||||||||| ||||||    
T  83220 acgacaccgacatttgtaattacactgaattatgtcattttt 83179  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 389
Target Start/End: Original strand, 17750 - 17789
Alignment:
Q  350 gacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    ||||||||||||||| |||||||| |||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttt 17789  T

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Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 292 - 388
Target Start/End: Original strand, 263313 - 263411
Alignment:
Q  292 gacactcctcggattaggcgtgtctcaatgtcggacatgttttgtgtccgat--cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||||||||||||||||||||   | ||| ||| || | ||||| ||   ||||||||||| ||||||| | |||||||||||||||||| ||||    
T  263313 gacactcctcggattaggcgtgtcttggtatcgaacacgtgtcgtgtctgacaccgacacgacactgacacttataattacactgaattatgtggtttt 263411  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Original strand, 25765 - 25807
Alignment:
Q  346 acacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||||||||||||||| | |||||||| ||||||||||||||    
T  25765 acacgacaccgacacttataattacactaaattatgtgatttt 25807  T

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Target: scaffold0083 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 45530 - 45563
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgt 382  Q
    |||||||||||||||| |||||||||||||||||    
T  45530 cgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0314 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Complemental strand, 9012 - 8968
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    ||||| |||||||||||||||||||||  |||||||||| |||||    
T  9012 cgacatgacaccgacacttgtgattacgttgaattatgtcatttt 8968  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 19626 - 19594
Alignment:
Q  357 acacttgtgattacactgaattatgtgattttt 389  Q
    |||||||| ||||||||||||||||||||||||    
T  19626 acacttgtaattacactgaattatgtgattttt 19594  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 44520 - 44564
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattatgtgatttt 388  Q
    |||||||| |||||||| | | |||||||||||||||||||||||    
T  44520 cgacacgataccgacacatataattacactgaattatgtgatttt 44564  T

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Target: scaffold0103 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 389
Target Start/End: Complemental strand, 51862 - 51830
Alignment:
Q  357 acacttgtgattacactgaattatgtgattttt 389  Q
    |||||||| ||||||||||||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttt 51830  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 389
Target Start/End: Complemental strand, 70337 - 70297
Alignment:
Q  349 cgacaccgacacttgtgattacactgaattatgtgattttt 389  Q
    |||||||||||||| | ||||||||||||||||| ||||||    
T  70337 cgacaccgacacttataattacactgaattatgttattttt 70297  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 56986 - 56950
Alignment:
Q  344 cgacacgacaccgacacttgtgattacactgaattat 380  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  56986 cgacacgacactgacacttatgattacactgaattat 56950  T

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