View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_low_68 (Length: 335)
Name: NF19103_low_68
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_68 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 325
Target Start/End: Original strand, 30995101 - 30995406
Alignment:
| Q |
18 |
tatcctgcataccggcttaacttcatgtggatcaaggtagaatgccttatcattctgaacaccaataatgtatgtcgaagcacctggttttccacccaag |
117 |
Q |
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| T |
30995101 |
tatcctgcataccggcttaacttcatgtggatcaaggtagaatgccttatcattctgaacaccaataatgtatgtcgaagcacctggttttccacccaag |
30995200 |
T |
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| Q |
118 |
attccaaggctctgaggaaatttaaaagttgactgtaataaaggaatgtacctgatgacagtttataacagcaagttatcagtgattgcactatcatgaa |
217 |
Q |
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| T |
30995201 |
attccaaggctctgaggaaatttaaaagttgactgcaataaaggaatgtacctgatgacagtttataacagcaagttatcggtgattgcactatcatgaa |
30995300 |
T |
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| Q |
218 |
aactgaacatctctcaaattatattttaaaaactatatattcaatcaaaatagacaactacaagaatgaaatatattatgtgcatccatcacacggttat |
317 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
30995301 |
aactgaacatctctcaaattatattttaaaaactacatattcaatcaaaatagacaactacaagaatgaa--atattatgtgcatccatcacacggttat |
30995398 |
T |
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| Q |
318 |
tatctctg |
325 |
Q |
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|||||||| |
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| T |
30995399 |
tatctctg |
30995406 |
T |
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