View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19103_low_82 (Length: 310)
Name: NF19103_low_82
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_82 |
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Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 34365708 - 34366008
Alignment:
| Q |
1 |
aactattccccactatatatacaagttctaagttcttaggtctcataaaccaaactttatattccttaataaatacccttaattgtttgaagatggtgta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
34365708 |
aactattccccactatatatacaagttctaagttcttaggtctcataaaccaaactttatattccttaataaatacccttaattgtttgaagatgatgta |
34365807 |
T |
|
| Q |
101 |
tacatcatctatgaagtcattgaaaatggtaatggttaaattgatgacattttttatgctaatagaggtgattacatgccaattcgggttcggattcggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34365808 |
tacatcatctatgaagtcattgaaaatggtaatggttaaattgatgacattttttatgctaatagaggtgattacatgccaattcgggttcggattcggg |
34365907 |
T |
|
| Q |
201 |
ggagggttaaacatgaactactatttgatgagttgcccttttgttgaaccagttgttaagaacatagtgaatagagctttggacaatgatcccacctttg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
34365908 |
ggagggttaaacatgaactactatttgatgagttgcccttttgttgaaccagttgttaagaacatagtgaatagagctttggacaatgatcccacccttg |
34366007 |
T |
|
| Q |
301 |
c |
301 |
Q |
| |
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| |
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| T |
34366008 |
c |
34366008 |
T |
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