View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19103_low_98 (Length: 279)
Name: NF19103_low_98
Description: NF19103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19103_low_98 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 25204104 - 25203884
Alignment:
| Q |
11 |
cagagacactctcttatgaaacactcacttttgatttctaatggttgaataatgaacagaatgaattttgatctcctatttgtaagagtatgaaaactaa |
110 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25204104 |
cagagacactctcttatgaaacactcacttttgatttctaatggttgaataatgaacagagtgaattttgatctcctatttgtaagagtatgaaaactaa |
25204005 |
T |
 |
| Q |
111 |
aaggattacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatca |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || |
|
|
| T |
25204004 |
aaggattacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcctgaggagtacatgcaaca |
25203905 |
T |
 |
| Q |
211 |
aaccaattgttattcatgcaa |
231 |
Q |
| |
|
|||| ||| |||||||||| |
|
|
| T |
25203904 |
tgccaaatgtcattcatgcaa |
25203884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 119 - 254
Target Start/End: Complemental strand, 25203784 - 25203649
Alignment:
| Q |
119 |
catgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaatt |
218 |
Q |
| |
|
|||||||| ||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
25203784 |
catgcaataaaccaagtgtcaagaggaaagcatgcaacaaaccaattgttattcatgcaacaaactaagtgtcaagatgaatacatgcatcaaaccaatt |
25203685 |
T |
 |
| Q |
219 |
gttattcatgcaatacaccatatgtcaagaggaatg |
254 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
25203684 |
gttattcatgcaatacaccatatgtcaagaggaatg |
25203649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 233
Target Start/End: Complemental strand, 25203915 - 25203829
Alignment:
| Q |
147 |
tacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaata |
233 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||| | |||| |||||| | ||| ||| |||||||||||||||| |
|
|
| T |
25203915 |
tacatgcaacatgccaaatgtcattcatgcaacaaactaagtgtccaaaggagtacatgtagaaaatcaagtgttattcatgcaata |
25203829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 25203837 - 25203725
Alignment:
| Q |
119 |
catgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaatt |
218 |
Q |
| |
|
|||||||| | ||||||| | || ||||||||| | || | ||| |||||||||||||| |||| ||||||||||||||| |||||| |||||||||| |
|
|
| T |
25203837 |
catgcaataacccaagtgcaatgacaaatacatgaatcaagtcaagtgttattcatgcaataaaccaagtgtcaagaggaaagcatgcaacaaaccaatt |
25203738 |
T |
 |
| Q |
219 |
gttattcatgcaa |
231 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25203737 |
gttattcatgcaa |
25203725 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 238
Target Start/End: Complemental strand, 25200177 - 25200059
Alignment:
| Q |
120 |
atgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattg |
219 |
Q |
| |
|
||||||| || || ||||||||| || ||||||| || | || |||||||||||||| |||||||||||||| || ||||||| | |||||||| || |
|
|
| T |
25200177 |
atgcaataaatcacgtgtcaagaggaacacatgcatcaagttaagtgttattcatgcaaaaaactaagtgtcaatagaaatacataccacaaaccaagtg |
25200078 |
T |
 |
| Q |
220 |
ttattcatgcaatacacca |
238 |
Q |
| |
|
|||||||| ||||| |||| |
|
|
| T |
25200077 |
ttattcattcaataaacca |
25200059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 256
Target Start/End: Complemental strand, 25203505 - 25203394
Alignment:
| Q |
145 |
aatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaatacaccatatgtc |
244 |
Q |
| |
|
||||||||||| ||||| |||||| ||| ||| ||| ||||||||| | ||||||| ||| ||| |||| ||||||||||| |||| |||| ||||| |
|
|
| T |
25203505 |
aatacatgcaaatagccaagtgttatccatccaataaatcaagtgtcaacatgaatacacgcaacaagccaaatgttattcatgtaataaaccaaatgtc |
25203406 |
T |
 |
| Q |
245 |
aagaggaatgca |
256 |
Q |
| |
|
||||| |||||| |
|
|
| T |
25203405 |
aagagtaatgca |
25203394 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 25203466 - 25203392
Alignment:
| Q |
131 |
caagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatg |
205 |
Q |
| |
|
|||||||||| || |||||| |||||| ||||||||||||||||| || |||| || ||||||||| ||| |||| |
|
|
| T |
25203466 |
caagtgtcaacatgaatacacgcaacaagccaaatgttattcatgtaataaaccaaatgtcaagagtaatgcatg |
25203392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 25203844 - 25203747
Alignment:
| Q |
165 |
tgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaatacaccatatgtcaagaggaatgcaagcaac |
262 |
Q |
| |
|
|||||||||||||| || | ||||| | || |||||||| ||||| ||| |||||||||||||||| |||| |||||||||||| ||| ||||| |
|
|
| T |
25203844 |
tgttattcatgcaataacccaagtgcaatgacaaatacatgaatcaagtcaagtgttattcatgcaataaaccaagtgtcaagaggaaagcatgcaac |
25203747 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 262
Target Start/End: Complemental strand, 18484166 - 18484032
Alignment:
| Q |
128 |
aaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcat |
227 |
Q |
| |
|
|||||| |||||||| |||||||| | || | ||| ||||||||||||||||||| || ||| |||| ||| |||||| |||||||| |||||||||| |
|
|
| T |
18484166 |
aaccaaatgtcaagaggaatacatgtagcaagtcaagtgttattcatgcaacaaaccaaatgttaagaataatgcatgcagcaaaccaagtgttattcat |
18484067 |
T |
 |
| Q |
228 |
gcaatacaccatatgtcaagaggaatgcaagcaac |
262 |
Q |
| |
|
|| | | || || ||||||||||||||||||| |
|
|
| T |
18484066 |
aaaacaaatcaagtgccaagaggaatgcaagcaac |
18484032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 253
Target Start/End: Original strand, 35711690 - 35711825
Alignment:
| Q |
117 |
tacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaa |
216 |
Q |
| |
|
||||||||| |||||||||||||||| ||||| ||||||| || | ||||| ||||||| || | || ||||| ||||||| |||||| ||| |||| |
|
|
| T |
35711690 |
tacatgcaacaaaccaagtgtcaagatcaatacttgcaacaa-cctagtgttacccatgcaataacccaaatgtcacgaggaatgcatgcaacaagccaa |
35711788 |
T |
 |
| Q |
217 |
ttgttattcatgcaatacaccatatgtcaagaggaat |
253 |
Q |
| |
|
||||||| ||| || | |||| |||||||||||||| |
|
|
| T |
35711789 |
ttgttatccatccagttaaccaaatgtcaagaggaat |
35711825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 178
Target Start/End: Complemental strand, 18483176 - 18483110
Alignment:
| Q |
112 |
aggattacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaa |
178 |
Q |
| |
|
|||| ||||||||| ||||||||||||||||||||||||||| || | ||| |||||| ||||||| |
|
|
| T |
18483176 |
aggaatacatgcaacaaaccaagtgtcaagataaatacatgcagcaagacaagtgttatccatgcaa |
18483110 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 35711744 - 35711858
Alignment:
| Q |
119 |
catgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaatt |
218 |
Q |
| |
|
|||||||| | |||| ||||| || ||| ||||||||| ||||| |||||| ||| || ||| || ||||||||||||||||| || ||| |||| | |
|
|
| T |
35711744 |
catgcaataacccaaatgtcacgaggaatgcatgcaacaagccaattgttatccatccagttaaccaaatgtcaagaggaatacatacaacaagccaaat |
35711843 |
T |
 |
| Q |
219 |
gttattcatgcaata |
233 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
35711844 |
gttattcatgcaata |
35711858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 11880001 - 11879964
Alignment:
| Q |
185 |
aagtgtcaagaggaatacatgcatcaaaccaattgtta |
222 |
Q |
| |
|
||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
11880001 |
aagtgtcaagaggaatacatgcatcaagccaagtgtta |
11879964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 18483169 - 18483108
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaata |
233 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| ||| ||| |||||| ||||||||| |
|
|
| T |
18483169 |
catgcaacaaaccaagtgtcaagataaatacatgcagcaagacaagtgttatccatgcaata |
18483108 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 31861114 - 31861182
Alignment:
| Q |
165 |
tgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaata |
233 |
Q |
| |
|
||||||||||| | ||| |||||||||||||| |||||||| |||||||| |||||||||||||||| |
|
|
| T |
31861114 |
tgttattcatgtagtaaatcaagtgtcaagaggattacatgcaacaaaccaaatgttattcatgcaata |
31861182 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 262
Target Start/End: Complemental strand, 28950668 - 28950537
Alignment:
| Q |
130 |
ccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgc |
229 |
Q |
| |
|
|||||||||||||| ||| |||||||| | || | ||| ||||||||||| |||||||||||||| |||||||| | |||||| ||||| |||||| |
|
|
| T |
28950668 |
ccaagtgtcaagatgaatgaatgcaacaagttaagttttacccatgcaacaaatcaagtgtcaagaggagtacatgcaac-aaccaagtgttactcatgc |
28950570 |
T |
 |
| Q |
230 |
aatacaccatatgtcaagaggaatgcaagcaac |
262 |
Q |
| |
|
|||| || |||||| || ||||||| ||||| |
|
|
| T |
28950569 |
aataactcaaatgtcatgacgaatgcatgcaac |
28950537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 35153529 - 35153561
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacat |
204 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |
|
|
| T |
35153529 |
catgcaacaaaccaagtgtcaagaggaatacat |
35153561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 223
Target Start/End: Original strand, 8037643 - 8037748
Alignment:
| Q |
117 |
tacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaa |
216 |
Q |
| |
|
|||||||||| ||| ||||||||||| ||||||||||||| |||||||||| ||||| || |||| || | ||| ||||||| |||||| ||| |||| |
|
|
| T |
8037643 |
tacatgcaataaactaagtgtcaagaaaaatacatgcaac-gaccaaatgttactcatgaaataaaccaaatctcatgaggaatgcatgcaacaacccaa |
8037741 |
T |
 |
| Q |
217 |
ttgttat |
223 |
Q |
| |
|
|||||| |
|
|
| T |
8037742 |
ctgttat |
8037748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 190
Target Start/End: Original strand, 39290068 - 39290146
Alignment:
| Q |
112 |
aggattacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgt |
190 |
Q |
| |
|
|||| ||||||||| | ||||||||||||| |||||||||||||| | || |||||| ||||||| ||||||||||| |
|
|
| T |
39290068 |
aggaatacatgcaacaagccaagtgtcaagagaaatacatgcaacaagttaagtgttatccatgcaataaactaagtgt |
39290146 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 3343604 - 3343531
Alignment:
| Q |
119 |
catgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtca |
192 |
Q |
| |
|
|||||||| | ||||||||||||| |||||||||| || ||||||||||| ||||||| |||| |||||||| |
|
|
| T |
3343604 |
catgcaataagccaagtgtcaagaggaatacatgcagcaagccaaatgttacccatgcaataaaccaagtgtca |
3343531 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 245
Target Start/End: Complemental strand, 3343810 - 3343737
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaatacaccatatgtca |
245 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||| ||| ||| ||||| ||||||||| |||| |||||| |
|
|
| T |
3343810 |
catgcaacaaaccaagtgtcaagatgaatacatgcagcaagtcaagtgttacccatgcaataaaccaaatgtca |
3343737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 3343604 - 3343538
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaatacacca |
238 |
Q |
| |
|
||||||| || | ||||||||||||||||||||||| ||| |||| ||||| ||||||||| |||| |
|
|
| T |
3343604 |
catgcaataagccaagtgtcaagaggaatacatgcagcaagccaaatgttacccatgcaataaacca |
3343538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 43108066 - 43108132
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaatacacca |
238 |
Q |
| |
|
|||||||||| | |||||| ||||||||||||| || ||| |||| ||||| |||||||||| |||| |
|
|
| T |
43108066 |
catgcaacaagccaagtgttaagaggaatacatacaacaagccaaatgttactcatgcaataaacca |
43108132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 3343817 - 3343737
Alignment:
| Q |
112 |
aggattacatgcaatcaaccaagtgtcaagataaatacatgcaacatgccaaatgttattcatgcaacaaactaagtgtca |
192 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| |||||||||| || | ||| ||||| ||||||| |||| || ||||| |
|
|
| T |
3343817 |
aggaatacatgcaacaaaccaagtgtcaagatgaatacatgcagcaagtcaagtgttacccatgcaataaaccaaatgtca |
3343737 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 233
Target Start/End: Original strand, 43108243 - 43108327
Alignment:
| Q |
149 |
catgcaacatgccaaatgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaata |
233 |
Q |
| |
|
||||||||| |||| |||||| || ||| |||| | || ||||||||| |||||||| |||| ||| |||||||||||||||| |
|
|
| T |
43108243 |
catgcaacaacccaattgttatccacgcagtaaaccaggtatcaagaggattacatgcaacaaagcaaatgttattcatgcaata |
43108327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 12513100 - 12513055
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaat |
217 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
12513100 |
catgcaacaatccaagtgtcaagaggaatacatgcagcaaaccaat |
12513055 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 18960693 - 18960729
Alignment:
| Q |
172 |
catgcaacaaactaagtgtcaagaggaatacatgcat |
208 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||| |
|
|
| T |
18960693 |
catgcaacaagccaagtgtcaagaggaatacatgcat |
18960729 |
T |
 |
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Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 233
Target Start/End: Complemental strand, 9321511 - 9321443
Alignment:
| Q |
165 |
tgttattcatgcaacaaactaagtgtcaagaggaatacatgcatcaaaccaattgttattcatgcaata |
233 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| || || || ||| ||| |||||||||||||||| |
|
|
| T |
9321511 |
tgttatccatgcaacaaactaaatgtcaagaggattatattcaacaaggcaaatgttattcatgcaata |
9321443 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Original strand, 39898223 - 39898252
Alignment:
| Q |
160 |
ccaaatgttattcatgcaacaaactaagtg |
189 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
39898223 |
ccaaatgttattcatgcaacaaactaagtg |
39898252 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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