View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19104_high_15 (Length: 415)
Name: NF19104_high_15
Description: NF19104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19104_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 387
Target Start/End: Original strand, 48560976 - 48561374
Alignment:
| Q |
1 |
ggagctgctgaaaccagtagcggatctatggggacgggttttgttgagagctgttgcgaaggattcgactctggcagcatctctttggagtctgagatgg |
100 |
Q |
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| T |
48560976 |
ggagctgctgaaaccagtagcggatctatggggacgggttttgttgagagctgttgcgaaggattcgactctggcagcatctctttggagtctgagatgg |
48561075 |
T |
|
| Q |
101 |
aagagttgttgtggggttttgtcggaggagagagtgtctatgtggtgtagctgaagggagagagattcttgttctattaggtcttcggattcgggtatgg |
200 |
Q |
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| T |
48561076 |
aagagttgttgtggggttttgtcggaggagagagtgtctatgtggtgtagctgaagggatagagattcttgttctattgggtctacggattcgggtatgg |
48561175 |
T |
|
| Q |
201 |
ataaagattcttgttctgattcgggccatgtgagtgttgaagggttaggaagagagcgaatagagagg------------gtttgtgtttgtggatgagt |
288 |
Q |
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| T |
48561176 |
ataaagattcttgttctgattcgggccatgtgagtgttgaagggttgggaagagagcgaatagagagggtttgtgtttgtgtttgtgtttgtggatgagt |
48561275 |
T |
|
| Q |
289 |
agtagaggttgttgatgagagtgtgaaggagaaggagaaggagatggctaataataggaagagaagggttttgttgttgttcccttccattgtagtaat |
387 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
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| T |
48561276 |
agtagtggttgttgatgagagtgtgaaggagaaggagaaggagatggctaataataggaagagaagggtattgttattgttcccttccattgtagtaat |
48561374 |
T |
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