View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19104_high_29 (Length: 329)
Name: NF19104_high_29
Description: NF19104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19104_high_29 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 12 - 315
Target Start/End: Original strand, 37047286 - 37047588
Alignment:
| Q |
12 |
tattcttggagttcatatatgacatctgcactaacttatgatactgaattaatgtaacagaacacagttaatttttgtttcctaagtaa--------taa |
103 |
Q |
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| T |
37047286 |
tattcttggagttcatatatgacatctgcactaacttatgatactgaattaatgtaacagaacacagttaattttt-tttcctaattaagttattaataa |
37047384 |
T |
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| Q |
104 |
aatctgcttcaatatttagtttgggtctgcaaatatttagtatccaattcagttaagaataaaagctactatactattatgacatgattttacattagaa |
203 |
Q |
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| T |
37047385 |
aatctgcttcaatctttagtttgggtctgcaaatatttagtatccaaatcagttaagaataaaagctactatactattatgacattattttacattagaa |
37047484 |
T |
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| Q |
204 |
aacatggcagctgatatattatcataagaaataaactgaacannnnnnnnngacaaaaaatcgactgaacatatactattaacaatttagatgtgcgtct |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
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| T |
37047485 |
aacatggcagctgatatattatcataagaaataaactgaaca-ttttttttgacaaaaaatcgactgaa-------tattaacaatttagatgtgcgtct |
37047576 |
T |
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| Q |
304 |
atatgtagtaga |
315 |
Q |
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|||||||||||| |
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| T |
37047577 |
atatgtagtaga |
37047588 |
T |
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