View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19104_high_33 (Length: 300)
Name: NF19104_high_33
Description: NF19104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19104_high_33 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 32 - 290
Target Start/End: Original strand, 22595262 - 22595524
Alignment:
| Q |
32 |
agacgtatgtgcttggatacacatttgtaaaatcacggcaaataactatattaacgcagaaacaacaatcaatcacttcgcattttgacatcaaaagacc |
131 |
Q |
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|||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22595262 |
agacgtatgtgcttggatacacgtttgcaaaatcacggcaaataactatattaactcagaaacaacaatcaatcacttcgcattttgacatcaaaagacc |
22595361 |
T |
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| Q |
132 |
ttagtcatgtggagtcgatgaaaataattcaaaccaaacatatatttggtgtataagtcatctcactttatactcaacgtctaatttttcatccatccgg |
231 |
Q |
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||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
22595362 |
ttagtcatgtggaatcgatgaaaataattcaaaccgaacatatatttggtgtataagtcatctcactttatactcaaagtctaatttttcatccatccgg |
22595461 |
T |
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| Q |
232 |
tttaagagttctaactcacat----ttactatacctacactttttcactcatgtagctctctg |
290 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
22595462 |
tttaagagttctaactcacatttacttactatacctacactttttcactcatgtagctctctg |
22595524 |
T |
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