View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19104_high_77 (Length: 209)
Name: NF19104_high_77
Description: NF19104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19104_high_77 |
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Alignment Details
Target: chr6 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 10598885 - 10599072
Alignment:
| Q |
10 |
aagaatatggtcaaagccaccactacctaagaagattcacaatgccaaactatttgacatttccatttcccactatataaaaacacgtgagagtttcaaa |
109 |
Q |
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| T |
10598885 |
aagaaaatggtcaaagccaccactacctaagaagattcacaatgccaaactatttgacatttccatttcccactatataaaaacacgtgagagtttcaaa |
10598984 |
T |
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| Q |
110 |
ttgtttccataaaaaagattatat--tataaaggaaacaaagaaaccaatttggttccaacttattccaaggaattgggagaaagaat |
195 |
Q |
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| T |
10598985 |
ttgtttccataaaaaagattatattatataaaggaaacaaagaaaccaatttggttccaacttattccaaggaattgggagaaagaat |
10599072 |
T |
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