View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19104_low_7 (Length: 542)

Name: NF19104_low_7
Description: NF19104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19104_low_7
NF19104_low_7
[»] chr1 (34 HSPs)
chr1 (248-525)||(34173309-34173572)
chr1 (10-150)||(34173075-34173214)
chr1 (257-354)||(52913199-52913297)
chr1 (257-355)||(18608638-18608736)
chr1 (260-355)||(2633208-2633303)
chr1 (260-352)||(26879583-26879675)
chr1 (257-354)||(33650580-33650678)
chr1 (259-352)||(2633338-2633431)
chr1 (257-329)||(7489959-7490031)
chr1 (260-354)||(1173075-1173167)
chr1 (260-322)||(52913034-52913096)
chr1 (257-339)||(2633521-2633600)
chr1 (257-329)||(40892564-40892636)
chr1 (257-330)||(33650398-33650471)
chr1 (260-348)||(18608765-18608853)
chr1 (257-329)||(26879666-26879738)
chr1 (256-310)||(7490018-7490072)
chr1 (260-334)||(50727571-50727645)
chr1 (260-325)||(52913095-52913161)
chr1 (257-330)||(33650665-33650738)
chr1 (257-354)||(52913331-52913428)
chr1 (259-355)||(18981052-18981148)
chr1 (260-351)||(38698916-38699003)
chr1 (257-346)||(40892488-40892576)
chr1 (260-338)||(33650461-33650541)
chr1 (290-354)||(41007453-41007517)
chr1 (254-322)||(50727644-50727712)
chr1 (278-329)||(52913160-52913211)
chr1 (260-329)||(7489902-7489971)
chr1 (257-329)||(30611889-30611961)
chr1 (257-293)||(18608588-18608624)
chr1 (262-329)||(1173278-1173345)
chr1 (259-358)||(18981177-18981274)
chr1 (263-310)||(18278632-18278677)
[»] chr4 (84 HSPs)
chr4 (257-354)||(45038356-45038453)
chr4 (257-358)||(40395275-40395376)
chr4 (260-358)||(41083230-41083328)
chr4 (257-358)||(11884676-11884777)
chr4 (257-358)||(12498796-12498897)
chr4 (257-349)||(24369249-24369341)
chr4 (259-358)||(24684224-24684321)
chr4 (259-354)||(40147142-40147237)
chr4 (257-355)||(40395159-40395257)
chr4 (257-338)||(41083114-41083195)
chr4 (260-348)||(9999476-9999564)
chr4 (257-355)||(11884795-11884892)
chr4 (255-329)||(45038441-45038515)
chr4 (260-354)||(53863498-53863592)
chr4 (273-354)||(12592255-12592336)
chr4 (259-348)||(17231990-17232079)
chr4 (257-310)||(41083338-41083391)
chr4 (260-349)||(53863380-53863469)
chr4 (257-329)||(2470173-2470245)
chr4 (257-340)||(46196170-46196253)
chr4 (255-329)||(7246289-7246363)
chr4 (272-358)||(51950545-51950631)
chr4 (257-354)||(12592370-12592467)
chr4 (260-329)||(25055884-25055953)
chr4 (257-329)||(2469899-2469971)
chr4 (257-349)||(26782353-26782444)
chr4 (257-352)||(2469959-2470052)
chr4 (259-324)||(2788164-2788229)
chr4 (257-354)||(46196298-46196395)
chr4 (257-349)||(2470093-2470185)
chr4 (257-329)||(7245992-7246064)
chr4 (257-329)||(21322035-21322107)
chr4 (257-349)||(26782478-26782570)
chr4 (257-329)||(40395099-40395171)
chr4 (257-329)||(41083054-41083126)
chr4 (257-324)||(21321980-21322047)
chr4 (254-329)||(46196107-46196182)
chr4 (257-354)||(50290183-50290279)
chr4 (260-354)||(12498683-12498777)
chr4 (256-354)||(25055940-25056040)
chr4 (260-345)||(41519204-41519289)
chr4 (256-348)||(2788081-2788172)
chr4 (257-329)||(12498885-12498957)
chr4 (257-324)||(7246052-7246119)
chr4 (254-321)||(40146949-40147016)
chr4 (265-348)||(45787091-45787174)
chr4 (257-352)||(51950663-51950758)
chr4 (258-349)||(55617537-55617627)
chr4 (258-349)||(55624841-55624931)
chr4 (259-329)||(24684054-24684124)
chr4 (260-306)||(25056184-25056230)
chr4 (263-329)||(45038252-45038318)
chr4 (260-340)||(2787950-2788028)
chr4 (257-302)||(14984063-14984108)
chr4 (257-322)||(53863591-53863656)
chr4 (257-349)||(7246209-7246301)
chr4 (263-339)||(9999356-9999431)
chr4 (254-306)||(55617638-55617690)
chr4 (254-306)||(55624942-55624994)
chr4 (259-310)||(9999572-9999623)
chr4 (291-346)||(24684142-24684197)
chr4 (260-354)||(25056074-25056170)
chr4 (257-340)||(40147012-40147094)
chr4 (260-315)||(50290417-50290472)
chr4 (259-309)||(45038191-45038241)
chr4 (257-329)||(11884615-11884688)
chr4 (257-302)||(24684337-24684382)
chr4 (257-325)||(9999289-9999357)
chr4 (261-324)||(12498623-12498687)
chr4 (257-329)||(40147227-40147299)
chr4 (270-354)||(45787214-45787298)
chr4 (257-308)||(17232130-17232181)
chr4 (257-332)||(40487907-40487982)
chr4 (257-308)||(41519439-41519490)
chr4 (257-296)||(45038306-45038345)
chr4 (264-306)||(12592187-12592228)
chr4 (260-338)||(44057260-44057337)
chr4 (260-310)||(45787315-45787365)
chr4 (257-306)||(7246112-7246161)
chr4 (261-298)||(11884882-11884919)
chr4 (259-332)||(40488351-40488424)
chr4 (260-324)||(19156564-19156628)
chr4 (257-329)||(46196383-46196455)
chr4 (257-324)||(51950751-51950816)
[»] chr5 (86 HSPs)
chr5 (257-358)||(25456335-25456436)
chr5 (257-354)||(16327279-16327376)
chr5 (257-349)||(16327158-16327250)
chr5 (260-358)||(10827281-10827379)
chr5 (264-346)||(28559302-28559384)
chr5 (260-358)||(37642857-37642955)
chr5 (257-358)||(35461496-35461597)
chr5 (257-353)||(28559417-28559513)
chr5 (256-349)||(1996201-1996294)
chr5 (257-355)||(17400724-17400824)
chr5 (257-358)||(20927905-20928006)
chr5 (259-355)||(25456454-25456550)
chr5 (254-348)||(7209845-7209939)
chr5 (261-354)||(38682785-38682878)
chr5 (257-329)||(35461701-35461773)
chr5 (254-358)||(36760774-36760878)
chr5 (257-354)||(14604125-14604223)
chr5 (257-354)||(1996333-1996430)
chr5 (259-348)||(5746157-5746246)
chr5 (259-352)||(28022130-28022223)
chr5 (259-352)||(36759665-36759758)
chr5 (257-329)||(1996142-1996214)
chr5 (257-329)||(35461436-35461508)
chr5 (257-349)||(37642979-37643071)
chr5 (257-358)||(4943075-4943178)
chr5 (260-355)||(10827170-10827263)
chr5 (257-354)||(12774329-12774428)
chr5 (260-355)||(35461615-35461710)
chr5 (259-329)||(25456540-25456609)
chr5 (260-358)||(35812092-35812190)
chr5 (260-329)||(20928081-20928150)
chr5 (257-354)||(33491572-33491669)
chr5 (257-354)||(12713065-12713164)
chr5 (257-329)||(17400812-17400884)
chr5 (257-329)||(38680630-38680702)
chr5 (252-315)||(4943241-4943304)
chr5 (258-329)||(23662144-23662215)
chr5 (252-302)||(19550359-19550409)
chr5 (257-303)||(28559235-28559281)
chr5 (259-324)||(1649341-1649406)
chr5 (260-334)||(13170001-13170070)
chr5 (258-315)||(23796373-23796430)
chr5 (252-329)||(25456271-25456347)
chr5 (260-348)||(17400607-17400695)
chr5 (281-346)||(29331956-29332017)
chr5 (257-329)||(40980711-40980783)
chr5 (259-346)||(14604254-14604341)
chr5 (260-354)||(5746287-5746381)
chr5 (262-308)||(10074211-10074257)
chr5 (260-322)||(10827378-10827440)
chr5 (259-329)||(19550101-19550171)
chr5 (259-329)||(23661881-23661951)
chr5 (259-329)||(23796619-23796689)
chr5 (254-324)||(35813568-35813638)
chr5 (260-329)||(1996418-1996487)
chr5 (260-329)||(4943166-4943235)
chr5 (260-329)||(20927848-20927917)
chr5 (257-349)||(23661939-23662029)
chr5 (257-349)||(23796541-23796631)
chr5 (257-329)||(16327098-16327170)
chr5 (259-349)||(23662063-23662154)
chr5 (257-348)||(35813485-35813575)
chr5 (260-354)||(20181404-20181498)
chr5 (257-315)||(32361168-32361226)
chr5 (260-346)||(32361231-32361317)
chr5 (257-298)||(6190697-6190738)
chr5 (257-354)||(19550259-19550355)
chr5 (290-354)||(7210245-7210309)
chr5 (252-332)||(7932760-7932840)
chr5 (264-328)||(14604332-14604396)
chr5 (257-329)||(28559501-28559573)
chr5 (291-339)||(35187994-35188042)
chr5 (257-309)||(35812201-35812253)
chr5 (257-332)||(6013567-6013642)
chr5 (257-332)||(6014012-6014086)
chr5 (257-332)||(7933209-7933284)
chr5 (254-329)||(17400542-17400616)
chr5 (295-358)||(35813386-35813449)
chr5 (283-329)||(5746121-5746167)
chr5 (257-303)||(16327388-16327434)
chr5 (291-345)||(38680719-38680773)
chr5 (257-298)||(42991658-42991699)
chr5 (255-310)||(1649473-1649526)
chr5 (260-329)||(14604072-14604137)
chr5 (260-324)||(15207630-15207694)
chr5 (254-321)||(37032971-37033036)
[»] chr3 (85 HSPs)
chr3 (257-358)||(36374863-36374964)
chr3 (257-355)||(252106-252204)
chr3 (257-354)||(36667260-36667357)
chr3 (257-352)||(47069711-47069806)
chr3 (256-354)||(43650043-43650141)
chr3 (257-354)||(14964890-14964986)
chr3 (257-354)||(25848347-25848444)
chr3 (256-348)||(13902990-13903082)
chr3 (257-349)||(47891305-47891397)
chr3 (257-354)||(25848478-25848575)
chr3 (257-358)||(26976376-26976477)
chr3 (257-349)||(32186658-32186750)
chr3 (260-352)||(47891172-47891264)
chr3 (257-347)||(39541415-39541506)
chr3 (257-348)||(40286298-40286389)
chr3 (257-354)||(26724070-26724167)
chr3 (257-354)||(36900054-36900151)
chr3 (257-346)||(46337562-46337651)
chr3 (257-348)||(5442515-5442607)
chr3 (257-358)||(40286425-40286524)
chr3 (260-346)||(47573884-47573969)
chr3 (259-348)||(28813899-28813988)
chr3 (260-349)||(36667141-36667229)
chr3 (259-348)||(47069590-47069679)
chr3 (257-349)||(18020007-18020099)
chr3 (257-329)||(26724275-26724347)
chr3 (260-355)||(32186525-32186620)
chr3 (257-339)||(26976491-26976573)
chr3 (261-348)||(50332501-50332584)
chr3 (257-329)||(47069528-47069600)
chr3 (257-332)||(45131439-45131514)
chr3 (259-329)||(3169715-3169785)
chr3 (255-329)||(25848285-25848359)
chr3 (260-350)||(27768369-27768459)
chr3 (259-324)||(252048-252113)
chr3 (257-310)||(32186462-32186515)
chr3 (260-329)||(46337505-46337574)
chr3 (257-354)||(50332614-50332710)
chr3 (257-353)||(3377028-3377124)
chr3 (259-354)||(40209855-40209948)
chr3 (257-324)||(18020092-18020159)
chr3 (259-310)||(28814022-28814073)
chr3 (260-355)||(36374982-36375075)
chr3 (259-322)||(39714632-39714694)
chr3 (257-322)||(30954957-30955023)
chr3 (257-322)||(30970769-30970835)
chr3 (254-324)||(36900144-36900214)
chr3 (260-354)||(40209738-40209831)
chr3 (263-329)||(43649990-43650056)
chr3 (260-358)||(47573758-47573856)
chr3 (273-354)||(3169544-3169625)
chr3 (259-324)||(13903074-13903139)
chr3 (257-358)||(14624107-14624207)
chr3 (252-329)||(47573690-47573767)
chr3 (257-322)||(47891392-47891457)
chr3 (260-348)||(39714545-39714633)
chr3 (259-354)||(43650175-43650271)
chr3 (257-329)||(50332698-50332770)
chr3 (260-347)||(7607673-7607759)
chr3 (257-328)||(25848564-25848635)
chr3 (259-310)||(39253793-39253844)
chr3 (252-321)||(25848631-25848701)
chr3 (261-323)||(30955017-30955078)
chr3 (261-323)||(30970829-30970890)
chr3 (260-310)||(36667404-36667454)
chr3 (263-329)||(40286244-40286310)
chr3 (262-348)||(42866077-42866163)
chr3 (261-338)||(27657986-27658062)
chr3 (257-329)||(28814063-28814135)
chr3 (257-329)||(40286512-40286584)
chr3 (266-310)||(47891118-47891162)
chr3 (291-346)||(14624235-14624290)
chr3 (262-329)||(28813843-28813909)
chr3 (255-306)||(43650284-43650335)
chr3 (284-354)||(45131519-45131590)
chr3 (257-332)||(52288381-52288456)
chr3 (259-297)||(36667357-36667395)
chr3 (259-324)||(27768308-27768373)
chr3 (291-340)||(54343350-54343398)
chr3 (259-295)||(3382500-3382536)
chr3 (260-288)||(14964854-14964882)
chr3 (384-420)||(31060068-31060104)
chr3 (252-308)||(36374798-36374854)
chr3 (255-315)||(40209951-40210010)
chr3 (260-348)||(51833393-51833481)
[»] chr2 (43 HSPs)
chr2 (259-354)||(31630127-31630222)
chr2 (257-355)||(25894965-25895063)
chr2 (261-354)||(9500969-9501062)
chr2 (259-348)||(5009360-5009448)
chr2 (257-349)||(25895101-25895193)
chr2 (257-324)||(25895186-25895253)
chr2 (259-354)||(36694494-36694589)
chr2 (255-352)||(11791781-11791878)
chr2 (260-352)||(4188995-4189087)
chr2 (257-329)||(33847698-33847770)
chr2 (252-338)||(43699435-43699521)
chr2 (256-358)||(4188621-4188723)
chr2 (257-310)||(9500905-9500958)
chr2 (257-358)||(44556585-44556686)
chr2 (259-358)||(3876914-3877013)
chr2 (257-352)||(31630258-31630351)
chr2 (260-346)||(4511452-4511537)
chr2 (257-339)||(29379888-29379970)
chr2 (275-349)||(33847619-33847693)
chr2 (254-323)||(1316032-1316101)
chr2 (257-338)||(1316095-1316176)
chr2 (259-330)||(5009160-5009232)
chr2 (266-354)||(30265448-30265536)
chr2 (265-348)||(39442418-39442501)
chr2 (257-329)||(44556525-44556597)
chr2 (260-346)||(12001792-12001876)
chr2 (259-358)||(14166365-14166463)
chr2 (256-306)||(4511636-4511686)
chr2 (259-329)||(29379958-29380028)
chr2 (259-329)||(31630339-31630409)
chr2 (252-329)||(5009438-5009514)
chr2 (257-329)||(36217208-36217278)
chr2 (257-309)||(30265380-30265432)
chr2 (291-354)||(4511942-4512005)
chr2 (260-315)||(14166466-14166521)
chr2 (260-315)||(36217163-36217217)
chr2 (257-354)||(3876788-3876884)
chr2 (264-329)||(4511396-4511461)
chr2 (260-354)||(5009222-5009320)
chr2 (259-332)||(39641686-39641759)
chr2 (264-354)||(36694381-36694470)
chr2 (260-355)||(39442297-39442392)
chr2 (261-318)||(39442505-39442562)
[»] chr6 (44 HSPs)
chr6 (257-355)||(21598505-21598603)
chr6 (257-349)||(21598631-21598723)
chr6 (260-354)||(17342621-17342715)
chr6 (256-347)||(35225457-35225548)
chr6 (255-354)||(35050594-35050693)
chr6 (257-354)||(9982730-9982827)
chr6 (260-349)||(17136907-17136996)
chr6 (257-358)||(24059725-24059826)
chr6 (257-324)||(35225398-35225465)
chr6 (257-330)||(21598710-21598783)
chr6 (257-358)||(364046-364146)
chr6 (257-346)||(10356450-10356539)
chr6 (257-329)||(10356261-10356333)
chr6 (257-329)||(10356527-10356599)
chr6 (257-329)||(21598445-21598517)
chr6 (257-324)||(9982940-9983007)
chr6 (260-354)||(13812247-13812341)
chr6 (257-354)||(2761582-2761679)
chr6 (257-329)||(10356321-10356393)
chr6 (256-348)||(13273252-13273343)
chr6 (258-329)||(35050731-35050802)
chr6 (257-354)||(9982851-9982947)
chr6 (257-349)||(3848548-3848640)
chr6 (257-329)||(17136844-17136916)
chr6 (291-354)||(2761495-2761558)
chr6 (259-306)||(17342729-17342776)
chr6 (258-324)||(35050851-35050917)
chr6 (260-329)||(9982673-9982742)
chr6 (257-302)||(35050813-35050858)
chr6 (260-324)||(13273335-13273399)
chr6 (266-310)||(24059887-24059931)
chr6 (259-349)||(35225594-35225684)
chr6 (252-333)||(12340787-12340868)
chr6 (260-301)||(19557872-19557913)
chr6 (272-329)||(19557904-19557961)
chr6 (259-296)||(35050704-35050741)
chr6 (257-333)||(364199-364274)
chr6 (257-329)||(13273068-13273140)
chr6 (259-349)||(13273130-13273217)
chr6 (257-332)||(5238920-5238995)
chr6 (291-349)||(17342534-17342592)
chr6 (291-349)||(31091261-31091318)
chr6 (257-298)||(12341257-12341298)
chr6 (257-329)||(24059667-24059737)
[»] chr7 (55 HSPs)
chr7 (257-346)||(6694718-6694807)
chr7 (260-352)||(44293954-44294046)
chr7 (259-352)||(4048264-4048357)
chr7 (257-354)||(11975507-11975604)
chr7 (260-352)||(40951826-40951918)
chr7 (257-358)||(11975616-11975718)
chr7 (257-358)||(41666320-41666421)
chr7 (259-349)||(30869585-30869675)
chr7 (275-349)||(44293850-44293924)
chr7 (257-329)||(27576596-27576668)
chr7 (257-349)||(42312819-42312911)
chr7 (260-355)||(4048392-4048487)
chr7 (260-354)||(27576511-27576605)
chr7 (260-353)||(27280677-27280770)
chr7 (281-354)||(29019332-29019405)
chr7 (260-349)||(29710505-29710594)
chr7 (259-351)||(3198273-3198365)
chr7 (257-349)||(6694591-6694682)
chr7 (257-329)||(29710320-29710392)
chr7 (257-329)||(42312759-42312831)
chr7 (260-354)||(40951694-40951787)
chr7 (257-329)||(11975706-11975778)
chr7 (257-329)||(27280874-27280946)
chr7 (257-329)||(30869665-30869737)
chr7 (257-329)||(31453047-31453119)
chr7 (254-329)||(42313056-42313132)
chr7 (257-310)||(29710380-29710433)
chr7 (257-354)||(43258304-43258401)
chr7 (257-329)||(29710585-29710657)
chr7 (259-330)||(6694533-6694604)
chr7 (255-333)||(6069262-6069340)
chr7 (260-358)||(22750379-22750477)
chr7 (257-315)||(44294051-44294109)
chr7 (257-346)||(41666204-41666293)
chr7 (257-329)||(27280614-27280686)
chr7 (257-329)||(30869409-30869481)
chr7 (257-324)||(26185970-26186036)
chr7 (257-315)||(6222080-6222138)
chr7 (259-321)||(27280822-27280884)
chr7 (257-315)||(42313010-42313068)
chr7 (257-322)||(40081191-40081256)
chr7 (260-324)||(4048205-4048269)
chr7 (259-315)||(40951634-40951690)
chr7 (266-354)||(43258435-43258522)
chr7 (259-339)||(46713272-46713352)
chr7 (258-329)||(41666145-41666216)
chr7 (255-329)||(30662153-30662227)
chr7 (257-303)||(48130042-48130088)
chr7 (263-300)||(3198219-3198256)
chr7 (257-310)||(3198459-3198512)
chr7 (259-352)||(6068714-6068807)
chr7 (259-308)||(46713213-46713262)
chr7 (259-315)||(6222141-6222197)
chr7 (260-288)||(29019255-29019283)
chr7 (255-324)||(44293778-44293843)
[»] chr8 (58 HSPs)
chr8 (260-352)||(20209442-20209534)
chr8 (260-352)||(20229150-20229242)
chr8 (257-354)||(24827417-24827514)
chr8 (257-354)||(41151465-41151562)
chr8 (260-354)||(41151586-41151680)
chr8 (259-354)||(6220364-6220458)
chr8 (257-349)||(27052583-27052671)
chr8 (275-349)||(20209338-20209412)
chr8 (275-349)||(20229046-20229120)
chr8 (260-354)||(27127938-27128031)
chr8 (257-333)||(24909605-24909681)
chr8 (259-353)||(9400007-9400102)
chr8 (260-354)||(27855620-27855714)
chr8 (260-322)||(41151679-41151741)
chr8 (257-358)||(6220243-6220344)
chr8 (257-329)||(24827357-24827429)
chr8 (257-329)||(24909669-24909741)
chr8 (257-329)||(41151405-41151477)
chr8 (260-354)||(36053027-36053121)
chr8 (259-352)||(14895126-14895218)
chr8 (260-329)||(27052471-27052540)
chr8 (285-346)||(28618825-28618886)
chr8 (290-358)||(38414956-38415025)
chr8 (257-329)||(6220183-6220255)
chr8 (257-329)||(6220448-6220520)
chr8 (257-324)||(9399816-9399883)
chr8 (255-322)||(9400099-9400166)
chr8 (297-354)||(14895012-14895069)
chr8 (259-324)||(27855559-27855624)
chr8 (268-337)||(29427952-29428021)
chr8 (257-332)||(20057014-20057089)
chr8 (257-324)||(27052408-27052475)
chr8 (257-315)||(20209539-20209597)
chr8 (257-315)||(20229247-20229305)
chr8 (259-329)||(27052659-27052729)
chr8 (257-354)||(27128055-27128153)
chr8 (259-352)||(24793023-24793116)
chr8 (257-352)||(9399876-9399970)
chr8 (259-354)||(15564022-15564116)
chr8 (257-332)||(42667446-42667521)
chr8 (257-315)||(14549958-14550016)
chr8 (260-347)||(24083223-24083305)
chr8 (257-315)||(27127878-27127935)
chr8 (260-336)||(15563907-15563983)
chr8 (257-329)||(16913001-16913073)
chr8 (260-335)||(9089971-9090046)
chr8 (259-310)||(16913063-16913114)
chr8 (257-332)||(20056570-20056645)
chr8 (257-324)||(27128146-27128212)
chr8 (257-332)||(45215906-45215981)
chr8 (266-346)||(14550070-14550147)
chr8 (260-339)||(14550204-14550285)
chr8 (260-302)||(16915224-16915266)
chr8 (257-339)||(36052895-36052977)
chr8 (257-298)||(42667924-42667965)
chr8 (255-324)||(20209266-20209331)
chr8 (255-324)||(20228974-20229039)
chr8 (260-304)||(24083122-24083166)
[»] scaffold0018 (4 HSPs)
scaffold0018 (257-359)||(161580-161682)
scaffold0018 (257-329)||(161404-161476)
scaffold0018 (257-329)||(161670-161742)
scaffold0018 (257-331)||(161464-161538)
[»] scaffold0157 (4 HSPs)
scaffold0157 (257-358)||(21580-21681)
scaffold0157 (260-354)||(21700-21794)
scaffold0157 (257-329)||(21520-21592)
scaffold0157 (261-324)||(21790-21854)
[»] scaffold0279 (2 HSPs)
scaffold0279 (257-329)||(1200-1272)
scaffold0279 (260-354)||(1115-1209)
[»] scaffold0002 (4 HSPs)
scaffold0002 (261-354)||(12228-12318)
scaffold0002 (258-349)||(12110-12200)
scaffold0002 (257-329)||(12051-12121)
scaffold0002 (260-315)||(12324-12377)
[»] scaffold0578 (1 HSPs)
scaffold0578 (259-330)||(2445-2517)
[»] scaffold0128 (2 HSPs)
scaffold0128 (257-358)||(2441-2542)
scaffold0128 (258-346)||(2580-2667)
[»] scaffold0246 (1 HSPs)
scaffold0246 (257-332)||(25846-25921)


Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-104; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 248 - 525
Target Start/End: Original strand, 34173309 - 34173572
Alignment:
Q  248 ctctatggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttag 347  Q
    |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  34173309 ctctatgagtcctttaagtttgatgtttgtaacagattggtcctttaagttattttggttacaaataagtcctttaaatttgtaa-cgttttcgatttag 34173407  T
Q  348 tcattctattagtccttctatgtcccactagaaggtggaacttgtggaacatacaaaatggattcttccatttctactgatttttctttcatacgcaaga 447  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34173408 ------------tccttctatgtcccactagaaggtggaacttgtggaacatacaaaatggattcttccatttctactgatttttctttcatacgcaaga 34173495  T
Q  448 gtaatagatcgatatttttcagaataatagtcgatatgactttttctttcatacgcaagagtcataggtcgaactctt 525  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  34173496 gtaatagatcgatattttttagaataatagtcaata-gactttttctttcatacgcaagagtcataggtcgaactctt 34173572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 34173075 - 34173214
Alignment:
Q  10 ataatactagggtgaaaactatcgacgtaagtaaactctatgagtgacaaaaacttattcatgttgaataagtgacttcaaacataaacgatggagggag 109  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34173075 ataatactagggtgaaaactatcgacgtaagtaaactcta-gagtgacaaaaacttattcatgttgaataagtgacttcaaacataaacgatggagggag 34173173  T
Q  110 gtgaattgtgttctttaaaatttgatgaaataagcacttac 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34173174 gtgaattgtgttctttaaaatttgatgaaataagcacttac 34173214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 52913199 - 52913297
Alignment:
Q  257 tcctttaagtttgaggtttgtaa-cagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  52913199 tcctttaagtttgaggtttgtaaacagattggtcctttaagttattctagtcacacataagtcctttaagtttgtaaacgttttcgatttagtcattct 52913297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 18608638 - 18608736
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||  ||| |||||||| |||||||| |||||| |||||||| |||||    
T  18608638 tcctttaagtttgaggtttgtaacagattgattctttaagttattttggtcacacttaagtcctttaagtttgtaaatgttttcaatttagtccttcta 18608736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 2633208 - 2633303
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| ||||||| |||||| || |||||||||||||||| ||| ||||||| ||||| ||||||||| ||||||||||||||||||||    
T  2633208 tttaagtttgagatttgtaatagattgttcatttaagttattttggttacacataaatcatttaagtttgtaaacattttcgatttagtcattcta 2633303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 26879675 - 26879583
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||| ||||| |||  |||||||||||| ||||||||||| |||||||||||    
T  26879675 tttaagtttgaagtttgaaacagattgatcctttaagttattttgatcacatatatgtcctttaaatttttaaacgttttcaatttagtcatt 26879583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 33650678 - 33650580
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||||| || |||| ||| ||||| |||||||||||||| ||||||||| ||||    
T  33650678 tcctttaactttgtggtttgtaagagattggtcctttaagttattttggtctcacataagtccttttaagtttgtaaacgtttttgatttagtccttct 33650580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 2633431 - 2633338
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||||||||||||| ||| || |||||||||||||| |||||  |||| |||||||||||||||||| ||||  |||||||||||    
T  2633431 ctttaagtttgaggtttgtaacatatttgttctttaagttatttttgtcacgcataagtcctttaaatttgtaaacatttttaatttagtcatt 2633338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 7489959 - 7490031
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||||||||||| ||||    
T  7489959 tcctttaagtttgaggtttgtaacagattaatcatttaagttattttggtcacacataaatcctttaagtttg 7490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 1173075 - 1173167
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||| ||||||||| ||  |||||||||||||||||||| |||| || ||||| ||||||||| |||||||||||||||||||    
T  1173075 tttaagtttgaggtttataacagattagtt-tttaagttattttggtcacacataagtc-tttaagtttgtaaacattttcgatttagtcattct 1173167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Original strand, 52913034 - 52913096
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  52913034 tttaagtttgaagtttgtaacagattagtcctttaagttattttggtcacacataaatccttt 52913096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 2633600 - 2633521
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||| |||   |||| ||||||||||||    
T  2633600 tcctttaagtttgaggtttgtgacagattggtcatttaagttattttggtcacatataagtcc---aaatctgtaaacgtttt 2633521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 40892636 - 40892564
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||| |||||||||||||||||| |||| || |||||||||||||||||||| |||| |||||||||||||    
T  40892636 tcctttgagtttgaggtttgtaacatattgatcatttaagttattttggtcacacataagtcctttaaatttg 40892564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 330
Target Start/End: Original strand, 33650398 - 33650471
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| || || |||| || ||||| |||||    
T  33650398 tcctttaagtttgaggtttataacagattggtcctttaagttattttgttcccacataagtcatttaagtttgt 33650471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 18608853 - 18608765
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||| |||||| ||||||||||||||| |  |||||||||||||| ||| | |||| |||||||| ||||||||||||||| |||||||    
T  18608853 tttacgtttgatgtttgtaacagattgatattttaagttattttgatcatagataagtcctttaagtttgtaaacgttttcaatttagt 18608765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 26879738 - 26879666
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||  ||||| |||| || ||||| ||||    
T  26879738 tcctttaagtttgaggtttgtaacagattggtcatttaagttatttttatcacacataagtcttttaagtttg 26879666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 7490018 - 7490072
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||||||||||||    
T  7490018 atcctttaagtttgaggtttgtaatagattgatcctttaaattattttggtcaca 7490072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 334
Target Start/End: Complemental strand, 50727645 - 50727571
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaac 334  Q
    ||||| ||| |||||||||||||||| ||| ||||||||||||| |||||| |  ||||||||||||||||||||    
T  50727645 tttaaatttaaggtttgtaacagatttgtcttttaagttattttagtcacacacgaatcctttaaatttgtaaac 50727571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 52913095 - 52913161
Alignment:
Q  260 tttaagtttgaggtttgtaa-cagattggtcctttaagttattttggtcacaaataaatcctttaaa 325  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||| |||||||||    
T  52913095 tttaagtttgaggtttgtaaacagattggtcatttaagttattctggtcacacataagtcctttaaa 52913161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 33650738 - 33650665
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    |||||||||||||||||| ||||||||||| |||||||||||| |||| || || |||| |||||||| |||||    
T  33650738 tcctttaagtttgaggttcgtaacagattgatcctttaagttactttgttcccacataagtcctttaactttgt 33650665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 52913428 - 52913331
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| ||  |||||| | ||| || |||| |||||||||| ||||| |||| |||||||| ||||||||||||||| |||||||| ||||    
T  52913428 tcctttaagtttcagacttgtaataaattagttctttgagttattttgatcacacataagtcctttaagtttgtaaacgttttctatttagtccttct 52913331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 355
Target Start/End: Original strand, 18981052 - 18981148
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||| || ||| ||| | |||| || | |||||||||||||||||| |||| |||||||| ||||||||| |||||||||| ||| |||||    
T  18981052 ctttaagtttaagttttataataaattgatcatataagttattttggtcacacataagtcctttaagtttgtaaacattttcgatttcgtctttcta 18981148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 351
Target Start/End: Original strand, 38698916 - 38699003
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcat 351  Q
    ||||| |||||| ||||||||| ||||||    |||||||||||||||||| |  | || ||||||||||||||||||||| ||||||||||    
T  38698916 tttaactttgagatttgtaacaaattggt----taagttattttggtcacacacgagtcttttaaatttgtaaacgttttcaatttagtcat 38699003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 40892576 - 40892488
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||| ||||||||||||||||||||||  ||||||||||||| | ||||| |||| || ||| | ||| ||||||||||| |||||    
T  40892576 tcctttaaatttgaggtttgtaacagattgg-actttaagttatttcgatcacacataagtcatttgagtttttaaacgttttcaattta 40892488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 33650461 - 33650541
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaattt-gtaaacgttt 338  Q
    |||||||||| ||| ||||||| ||||||||||| |||||||||||||||||  ||| |||||||| ||| ||||||||||    
T  33650461 tttaagtttgtggtatgtaacatattggtccttttaagttattttggtcacacgtaagtcctttaagtttggtaaacgttt 33650541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 41007517 - 41007453
Alignment:
Q  290 ctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||| ||| |||||||||| |||| || ||||| ||||||||||||||| |||||||||||||    
T  41007517 ctttaaattaatttggtcacatataagtcttttaagtttgtaaacgttttcaatttagtcattct 41007453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 322
Target Start/End: Complemental strand, 50727712 - 50727644
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||||||||||||||||||||| ||||| ||| ||| ||||||||||||| ||| || |||| ||||||    
T  50727712 ggatcctttaagtttgaggtttctaacaaatttgtcatttaagttattttagtcgcacataagtccttt 50727644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 52913160 - 52913211
Alignment:
Q  278 aacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||| |||||||||||||||||||||||||||| |||| |||||||| ||||    
T  52913160 aacatattggtcctttaagttattttggtcacacataagtcctttaagtttg 52913211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 7489902 - 7489971
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||| | |||||| || ||||| ||||||| |||||| |||| |||||||| ||||    
T  7489902 tttaagtttgaggtttgtgagagattgatcatttaaattattttagtcacacataagtcctttaagtttg 7489971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 30611889 - 30611961
Alignment:
Q  257 tcctttaagtttgaggtttg-taacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| ||||||||||| |||||  |||||  ||||||||||||| |||||| ||||||||||||||||||    
T  30611889 tcctttaaatttgaggtttggtaacatgttggtt-tttaagttattttagtcacacataaatcctttaaatttg 30611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 293
Target Start/End: Original strand, 18608588 - 18608624
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtccttt 293  Q
    ||||||||||||||||||||||||||||| |||||||    
T  18608588 tcctttaagtttgaggtttgtaacagatttgtccttt 18608624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 1173345 - 1173278
Alignment:
Q  262 taagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||| ||||||   |||||||||||||| || ||| |||| | |||||||||||    
T  1173345 taagtttgaggtttgtaatagattgaaactttaagttattttagttacatataagttctttaaatttg 1173278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 18981274 - 18981177
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||||||| ||||| |||||||| | ||||||||||||||  ||| | |||| |  ||||| |||||||| |||||| | |||||||||||||||    
T  18981274 ctttaagtttgagatttgttacagattgat-ctttaagttattttaatcatatataagttatttaagtttgtaaatgttttc-aattagtcattctatta 18981177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 18278677 - 18278632
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||    
T  18278677 aagtttgaggtttgtaatagattgttcc--taagttattttggtcaca 18278632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 45038453 - 45038356
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  45038453 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcgatttagtcattct 45038356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 40395376 - 40395275
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||| ||| |||||||||||||||||||| ||||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  40395376 tcctctaaatttgaggtttgtaacagattagtcctttaagttatttctgtcacacataagtcctttaaatttgtaaacgttttcgatttagtccttctat 40395277  T
Q  357 ta 358  Q
    ||    
T  40395276 ta 40395275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 41083328 - 41083230
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||| || |||||    
T  41083328 tttaagtttgaggttcgtaacagattggtcttttaagttatttcggtcacacataagtcctttaagtttgtaaacgttttcgatttagtccttatatta 41083230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 11884676 - 11884777
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||| | |||||| ||||||||| |||||||||||||| ||||||    
T  11884676 tcctttaagtttgaggtttgtaacagattggtccttcaatttattttagtcacaactaagttctttaagtttgtaaacattttcgatttagtccttctat 11884775  T
Q  357 ta 358  Q
    ||    
T  11884776 ta 11884777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 12498897 - 12498796
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||| ||||||||||| |  |||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||||| ||||||    
T  12498897 tcctttaagtttgagatttgtaacagactaatcctttaaattatttcggtcacacataagtcttttaaatttgtaaacgttttcgatttagtccttctat 12498798  T
Q  357 ta 358  Q
    ||    
T  12498797 ta 12498796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 24369341 - 24369249
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||| |||||||| |||||||| |||||||||||||||    
T  24369341 tcctttaagtttgaggtttgtaatagatttgtcctttaagttattttagtcacacctaagtcctttaagtttgtaaatgttttcgatttagtc 24369249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 24684321 - 24684224
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||||||||||||||||||||||||  ||||||||||||  |||||| |||| |||||||| ||| |||||||||||||||||||| ||||||||    
T  24684321 ctttaagtttgaggtttgtaacagattggt--tttaagttatttcagtcacacataagtcctttaagtttataaacgttttcgatttagtctttctatta 24684224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 40147237 - 40147142
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||| ||||  |||||||||||||||  ||||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  40147237 ctttaagtttgaggtttgtaacaaattgaccctttaagttatttttctcacatataagtcctttaaatttgtaaacattttcgatttagtccttct 40147142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 40395159 - 40395257
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||||||| ||||||| ||||| ||||||| ||||||| |||| ||| |||||    
T  40395159 tcctttaagtttgaggtttgtaacatattagttctttaagttattttggtcacacataaatcttttaagtttgtaagcgttttcaattttgtccttcta 40395257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 41083114 - 41083195
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttt 338  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| ||||| |||| |||||||| |||||||||||||    
T  41083114 tcctttaagtttgaagtttgtaacatattggtcctttaagttattttgatcacacataagtcctttaagtttgtaaacgttt 41083195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 9999564 - 9999476
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||| |||| || ||||| |||||||| |||||| |||||||    
T  9999564 tttaagtttgaggtttgtaacagattggtcatttaagttatttttgtcacatataagtcatttaactttgtaaaagttttcaatttagt 9999476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 11884892 - 11884795
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| | |||||||||||||||||||||||| ||| ||||||||||||||| | |||||| |||||||| | ||||||||||||| |||||    
T  11884892 tcctttaagttttaagtttgtaacagattggtcctttaaattaatttggtcacaaataagttctttaagtttgtaaatg-tttcgatttagtccttcta 11884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 45038515 - 45038441
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||||||| ||||    
T  45038515 gatcctttaagtttgaggtttgtaatagattggtcatttaagttatttttgtcacaaataagtcctttaagtttg 45038441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 53863592 - 53863498
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||   |||| |||||||| |||||||| |||||| |||||||| ||||    
T  53863592 tttaagtttgagggttgtaacaaattggtcctttaagttattttggtcatgcataagtcctttaagtttgtaaaagttttcaatttagtccttct 53863498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 273 - 354
Target Start/End: Original strand, 12592255 - 12592336
Alignment:
Q  273 tttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| || |||||||||||||||||||| ||||||| | ||| ||||||||||||||| |||||||||||||    
T  12592255 tttgtaacagattgatcatttaagttattttggtcacacataaatcttgtaagtttgtaaacgttttcaatttagtcattct 12592336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 17231990 - 17232079
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||| ||||| |||| || ||||| ||||||||||||||| |||||||    
T  17231990 ctttaagtttgaggtttgtaacagataagtcttttaagttattttgatcacacataagtcttttaagtttgtaaacgttttcaatttagt 17232079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 41083391 - 41083338
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41083391 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 41083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 53863380 - 53863469
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||| ||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||| |||||||| | |||| ||||||||    
T  53863380 tttaagttcgagatttgtaacagattggtcctttaagttattttagtcacacataagtcctttaagtttgtaaaagatttcaatttagtc 53863469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 2470245 - 2470173
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  2470245 tcctttcagtttaaggtttgtaatagattggtcctttaagttattttggtcacatataagtcctttaaatttg 2470173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 46196170 - 46196253
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttc 340  Q
    |||||||||||||| |||||||||| |||||||||||||| ||||| |  | ||||||| ||||||||||||||||||||||||    
T  46196170 tcctttaagtttgacgtttgtaacaaattggtcctttaagatatttggagctcaaataagtcctttaaatttgtaaacgttttc 46196253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 7246363 - 7246289
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||| |||||||| ||||    
T  7246363 gatcctttaagtttgaggtttgtaacatattggtcttttaagttattttggtcatacataagtcctttaagtttg 7246289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 272 - 358
Target Start/End: Original strand, 51950545 - 51950631
Alignment:
Q  272 gtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||| ||||||| || |||||||||||||||||||| |||| |||||||| |||||||| |||||| |||||||| ||||||||    
T  51950545 gtttgtagcagattgatcttttaagttattttggtcacacataagtcctttaagtttgtaaatgttttcaatttagtccttctatta 51950631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 12592467 - 12592370
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| |||||||| |||||| || |||||||||| ||||||| | |||| || ||||| |||||||| ||||||||||||||| ||||    
T  12592467 tcctttaagtttgaagtttgtaatagattgatcttttaagttatattggtcatacataagtcttttaagtttgtaaaagttttcgatttagtccttct 12592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 25055884 - 25055953
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||| ||||    
T  25055884 tttaagtttgaggtttgtaatagatttgtcctttaagttattttggtgacacataaatcctttaagtttg 25055953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 2469899 - 2469971
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||| |||||||| ||||    
T  2469899 tcctttaagtttgaggtttgtaatagattggttctttaagttattttggtcacacctaagtcctttaagtttg 2469971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 26782353 - 26782444
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||| | ||| || ||||| ||||||||  ||||| ||||||||    
T  26782353 tcctttaagtttgatatttgtaacagattggtcctttaagttattttggtcac-actaagtcttttaagtttgtaaaaattttcaatttagtc 26782444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 2469959 - 2470052
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||||| ||||||| | ||||||||||||| ||| |||||||||| |||| | |||||| ||||||||| |||||||||||||||||    
T  2469959 tcctttaagtttgagctttgtaatatattggtcctttaaatta-tttggtcacatataagt-ctttaagtttgtaaaccttttcgatttagtcatt 2470052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 2788229 - 2788164
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||| |||| |  |||||||||||||||||||| |||||||||||||    
T  2788229 ctttaagtttgaggtttgtaacaaattgatattttaagttattttggtcacacataaatcctttaa 2788164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 46196395 - 46196298
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | | ||||||| |  ||||| |||| |||| ||||| |||||||| ||||    
T  46196395 tcctttaagtttgaggtttgtaacagattggaccattaagttattttaggcgcaaataagtattttaagtttgcaaacattttcaatttagtccttct 46196298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 2470185 - 2470093
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||| |||||||||||||| | |||||||||||||||||||||||||||| |||| || ||| | | |||| || ||| ||||||||||    
T  2470185 tcctttaaatttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtctttttagtatgtatacctttccgatttagtc 2470093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 7245992 - 7246064
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||||||||| | |||| |||||||| ||||    
T  7245992 tcctttaagtttgacgtttgtaacaggttgatcctttaagttattttggtcagacataagtcctttaagtttg 7246064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 21322107 - 21322035
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| |||  || |||||||||||||||||||| |||| |||||||| ||||    
T  21322107 tcctttaagtttgaggtttgtaacacatttttcttttaagttattttggtcacatataagtcctttaagtttg 21322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 26782570 - 26782478
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||| | |||| |  ||||||||||||| |||||| |||| || ||||| |||||||| |||||| ||||||||    
T  26782570 tcctttaagtttgaggtttgtaatatattgattttttaagttatttttgtcacatataagtcttttaagtttgtaaaagttttcaatttagtc 26782478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 40395099 - 40395171
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| ||||| |||||||||||||||| |||||||| |||||| |||| |||||||| ||||    
T  40395099 tcctttaagtttgagatttgttacagattggtcctttaggttatttttgtcacatataagtcctttaagtttg 40395171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 41083054 - 41083126
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| |||| || ||||||||||||| |||||| |||| |||||||| ||||    
T  41083054 tcctttaagtttgaggtttgtaacatattgatcatttaagttatttttgtcacatataagtcctttaagtttg 41083126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 21322047 - 21321980
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||| |||  |||||| |||||    
T  21322047 tcctttaagtttgaggtttgtaaaagattggtcctttaacttattttggttacacgtaaatcttttaa 21321980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 46196107 - 46196182
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||| ||||||||| | |||||||| ||||  ||||||||||||||||||||||||||||| |||||||| ||||    
T  46196107 ggatcttttaagtttcacgtttgtaatagatatgtcctttaagttattttggtcacaaataagtcctttaagtttg 46196182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 50290183 - 50290279
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaat-cctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||| ||| ||||||  |||||||||||||||||||| |||||| | ||||| ||| ||||  |||| ||||||||||||||    
T  50290183 tcctttaagtttgaggtttgttacaaattggt--tttaagttattttggtcacacataaatacttttaagtttttaaatatttttgatttagtcattct 50290279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 12498683 - 12498777
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||| ||||||| || | |||| || |||||||||||||||||||| ||||||||||||| ||||||||   |||| |||||||| ||||    
T  12498683 tttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaaaaatttcaatttagtccttct 12498777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 25055940 - 25056040
Alignment:
Q  256 atcctttaagtttgagg--tttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattc 353  Q
    |||||||||||||||||  |||||||||||||| ||| |||||||||||| |||||| |||   ||||||| | |||||| |||||| |||||||| |||    
T  25055940 atcctttaagtttgaggattttgtaacagattgttccattaagttatttttgtcacacatatgacctttaagtatgtaaatgttttccatttagtccttc 25056039  T
Q  354 t 354  Q
    |    
T  25056040 t 25056040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 345
Target Start/End: Original strand, 41519204 - 41519289
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattt 345  Q
    ||||| |||||||||| ||| ||||| ||| | ||||||||||| |||| |||||| |||||||| ||||||||||||||| ||||    
T  41519204 tttaaatttgaggtttctaatagatttgtcatctaagttattttagtcaaaaataagtcctttaagtttgtaaacgttttcaattt 41519289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 2788172 - 2788081
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||| |||||||||| | |||| |||||||||| |||||||||| | |||| ||| |||| || |||||| |||||||||||||    
T  2788172 atcctttaagtttaaggtttgtaaaaaattgatcctttaagtcattttggtcagagataagtcc-ttaagttggtaaacattttcgatttagt 2788081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 12498957 - 12498885
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||  ||||| |||| |||||||| ||||    
T  12498957 tcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 12498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 7246052 - 7246119
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||  ||||||||| ||||||| |||||||||||||||| ||| |||| ||||||||    
T  7246052 tcctttaagtttgatatttgtaacaaattggtcgtttaagttattttggttacacataagtcctttaa 7246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 40146949 - 40147016
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctt 321  Q
    ||||| |||||||||||||||||| | ||||| ||| |||||||||||||||||||| |||| |||||    
T  40146949 ggatcttttaagtttgaggtttgtgatagatttgtcatttaagttattttggtcacacataagtcctt 40147016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 348
Target Start/End: Original strand, 45787091 - 45787174
Alignment:
Q  265 gtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||||||||||||| || ||||| |||||||||| ||| ||||  | ||||| ||| ||||| |||||||||||||    
T  45787091 gtttgaggtttgtaacagattgatcatttaacttattttggttacacataagacatttaagtttataaacattttcgatttagt 45787174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 51950758 - 51950663
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||| |||||||  || | |||||| |||||||||| |||||| | | |||| |||||||| ||||||||| ||||| |||||||||||    
T  51950758 tcctttaagttcgaggtttacaataaattggttctttaagttaatttggttatacataagtcctttaagtttgtaaacattttcaatttagtcatt 51950663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 55617627 - 55617537
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||| |||||| |||| |  ||||| |||||||| |||||| ||||||||    
T  55617627 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt-gtttaagtttgtaaatgttttcaatttagtc 55617537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 55624931 - 55624841
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||||| |||||| |||| |  ||||| |||||||| |||||| ||||||||    
T  55624931 cctttaagtttgaggtttgcaacatatttgtcttttaagttattttagtcacacataagt-gtttaagtttgtaaatgttttcaatttagtc 55624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 24684054 - 24684124
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||| ||| |||||| |  ||||||||||||| |||||| ||||||||||||| ||||    
T  24684054 ctttaagtttgaggtttataatagattgatgttttaagttatttttgtcacatataaatcctttaagtttg 24684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 306
Target Start/End: Complemental strand, 25056230 - 25056184
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25056230 tttaagtttgaggtttgtaacaaattggtcttttaagttattttggt 25056184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 45038252 - 45038318
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||| |||||| |||||||||||||| ||||||||||| ||||||| |||| |||||||| ||||    
T  45038252 aagtttaaggtttataacagattggtccgttaagttatttcggtcacacataagtcctttaagtttg 45038318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 2787950 - 2788028
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttc 340  Q
    ||||||||| |||||||||||| ||| ||  |||||||||||||||||||| |||| || ||||| |||||||| ||||||    
T  2787950 tttaagtttaaggtttgtaacatatttgt--tttaagttattttggtcacacataagtcatttaagtttgtaaatgttttc 2788028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 14984108 - 14984063
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattt 302  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  14984108 tcctttaagtttgatgtttgtaacatattggtcctttaagttattt 14984063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 53863656 - 53863591
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||||||||||| | |||||||| ||||||||| ||||||||||||| |||||| |||| ||||||    
T  53863656 tcctttaagtttcaagtttgtaatagattggtcgtttaagttattttagtcacacataagtccttt 53863591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 7246301 - 7246209
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||| |||| || |||||||| |||||  |||||||  ||||| |||| | |||||| |||||||| |||||| ||||||||    
T  7246301 tcctttaagtttgagatttggaatagattggttctttagtttatttttatcacacataagtactttaagtttgtaaaagttttcaatttagtc 7246209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 339
Target Start/End: Original strand, 9999356 - 9999431
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    |||||||| |||| ||||| ||||||  |||||||||| ||||||||| |||||| |||||| ||||||||||||||    
T  9999356 aagtttgatgtttctaacatattggtt-tttaagttatattggtcacacataaattctttaagtttgtaaacgtttt 9999431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 55617690 - 55617638
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    ||||||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  55617690 ggatcctttaaatttgaggtttgtaatagattagttctttaagttattttggt 55617638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 55624994 - 55624942
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    ||||||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  55624994 ggatcctttaaatttgaggtttgtaatagattagttctttaagttattttggt 55624942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 9999623 - 9999572
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||| || |||||||| ||||||||| ||||||||||||||||||||    
T  9999623 ctttaagttagaagtttgtaatagattggtcatttaagttattttggtcaca 9999572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 346
Target Start/End: Original strand, 24684142 - 24684197
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||||| ||| ||||||| ||||| ||||||||||||||| |||||    
T  24684142 tttaagttattttggttacacataaatcttttaagtttgtaaacgttttcaattta 24684197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 25056170 - 25056074
Alignment:
Q  260 tttaagtttgaggtttgtaa---cagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||   || |||||||| ||||||| ||||||||| |  ||| || ||||| ||||||||||||||| |||||||| ||||    
T  25056170 tttaagtttgaggtttgtaataacatattggtcccttaagttcttttggtcatat-taagtcatttaagtttgtaaacgttttcaatttagtccttct 25056074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 340
Target Start/End: Original strand, 40147012 - 40147094
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttc 340  Q
    ||||| ||||||||||||||||| |||||| ||| ||| ||||||||||||||| || | ||||||||  ||||||| ||||||    
T  40147012 tccttgaagtttgaggtttgtaatagattgatcc-ttaggttattttggtcacacatgagtcctttaaggttgtaaatgttttc 40147094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 50290472 - 50290417
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||||||||||||||| | |||| || |||||||||||||||||||| ||||    
T  50290472 tttaagtttgaggtttgtaataaattgatcatttaagttattttggtcacacataa 50290417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 309
Target Start/End: Original strand, 45038191 - 45038241
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcac 309  Q
    ||||||||||||||||||||| | |||| || |||||||||||||||||||    
T  45038191 ctttaagtttgaggtttgtaatatattgatcttttaagttattttggtcac 45038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 11884615 - 11884688
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| |||||||||||||||| |||  |||||| |||||||||| |||||| |||| |||||||| ||||    
T  11884615 tcctttaaatttgaggtttgtaacaaattaatccttttaagttatttttgtcacacataagtcctttaagtttg 11884688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 24684382 - 24684337
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattt 302  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  24684382 tcctttaagtttgaggtttataatagattggtcttttaagttattt 24684337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 325
Target Start/End: Original strand, 9999289 - 9999357
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaa 325  Q
    |||||||||| ||||||||||||||||||  ||||||| ||| || || ||||| |||| |||||||||    
T  9999289 tcctttaagtctgaggtttgtaacagatttatcctttaggttgttctgatcacacataagtcctttaaa 9999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Original strand, 12498623 - 12498687
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatcctttaa 324  Q
    |||| |||||||||||||| |||||||||| ||||||||||||| |||||| |||| || |||||    
T  12498623 ttaaatttgaggtttgtaatagattggtccttttaagttatttttgtcacacataagtcttttaa 12498687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 40147299 - 40147227
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||| ||| | ||||||| |||||||  ||||||||||| |||| | |||||| ||||    
T  40147299 tcctttaagtttgaggtttataataaattggtcatttaagtcgttttggtcacacataagttctttaagtttg 40147227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 45787298 - 45787214
Alignment:
Q  270 aggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||| | ||| ||  |||||||||||||| ||||| |||| |  ||||| |||| |||||||||| |||||||||||||    
T  45787298 aggtttgtaataaattagttttttaagttattttgatcacacataagttttttaagtttgcaaacgttttcaatttagtcattct 45787214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 17232181 - 17232130
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtca 308  Q
    |||||||||||||||||||||||||  |  || |||||||||||||||||||    
T  17232181 tcctttaagtttgaggtttgtaacatgtatgtactttaagttattttggtca 17232130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 40487907 - 40487982
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  40487907 tcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 40487982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 41519490 - 41519439
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtca 308  Q
    ||||||||||||||||||| ||||| ||| ||| ||||||||||||| ||||    
T  41519490 tcctttaagtttgaggtttctaacaaattagtcttttaagttatttttgtca 41519439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 45038306 - 45038345
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaag 296  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  45038306 tcctttaagtttgagatttataacagattggtcctttaag 45038345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 12592187 - 12592228
Alignment:
Q  264 agtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    |||||||||||||||||||||||||  ||||||||||||||||    
T  12592187 agtttgaggtttgtaacagattggt-ttttaagttattttggt 12592228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 338
Target Start/End: Complemental strand, 44057337 - 44057260
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttt 338  Q
    |||||||||||| ||||||| | ||||||| ||||||||||||| |||| | |||| | ||||||  ||||||||||||    
T  44057337 tttaagtttgagatttgtaataaattggtcatttaagttattttagtcatacataagt-ctttaagcttgtaaacgttt 44057260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 45787365 - 45787315
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||||||||||| | |||| |  ||||||||||||||||||||    
T  45787365 tttaagtttgaggtttgtaataaattgattttttaagttattttggtcaca 45787315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 7246112 - 7246161
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    |||||||||||| |  |||||||||||||| |||||||||| ||||||||    
T  7246112 tcctttaagttttatatttgtaacagattgatcctttaagtaattttggt 7246161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 298
Target Start/End: Complemental strand, 11884919 - 11884882
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagtt 298  Q
    ||||||||||||||||||||||||  ||||||||||||    
T  11884919 ttaagtttgaggtttgtaacagataagtcctttaagtt 11884882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 40488424 - 40488351
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||| |||||||||| || |||||||||||||  ||| || |||||||  || ||||| |||||||    
T  40488424 ctttaagtttgacgtttgtaacaaataggtcctttaagtttgttttgtaacaaatatgtcatttaactttgtaa 40488351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 19156628 - 19156564
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||  ||||||||||||||  |||||||||||||||| || ||| || | ||||||||    
T  19156628 tttaagtttggtgtttgtaacagattcatcctttaagttatttttgtaacatatcagtcctttaa 19156564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 46196455 - 46196383
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||| ||||||||  ||| | ||||||||||| |||| | |||| |||||||| ||||    
T  46196455 tcctttaagtttgacgtttataacagataagtcatgtaagttatttttgtcatacataagtcctttaagtttg 46196383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 51950816 - 51950751
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||| |||||||| ||||||||||||  | |||||||||| |||  ||| ||||||||    
T  51950816 tcctttaagtttgaagtttgtaatagattggtcctt--aattattttggttacacttaagtcctttaa 51950751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 4e-36; HSPs: 86)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 25456335 - 25456436
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || ||||| ||||||||||||||| ||||||    
T  25456335 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataagtcttttaagttggtaaatgttttcgatttagtccttctat 25456434  T
Q  357 ta 358  Q
    ||    
T  25456435 ta 25456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 16327376 - 16327279
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||| ||||    
T  16327376 tcctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacgttttcaatttagtccttct 16327279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 16327158 - 16327250
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||| ||||||||||||||| ||||||||    
T  16327158 tcctttaagtttgaggtttgtaacagattggtcgtttaagttattttggtaacacataagtcctttaagtttgtaaacgttttcaatttagtc 16327250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 10827379 - 10827281
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    |||||||||||| |||||||||||||| |||||||| |||||||||||||||| || |||||||| |||||||||||||||||||||||| ||| ||||    
T  10827379 tttaagtttgagttttgtaacagattgatcctttaaattattttggtcacaaacaagtcctttaagtttgtaaacgttttcgatttagtccttccatta 10827281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 264 - 346
Target Start/End: Original strand, 28559302 - 28559384
Alignment:
Q  264 agtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||    
T  28559302 agtttgaggtttgtaacagattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaattta 28559384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 37642857 - 37642955
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||| | ||||||||||  ||| || ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37642857 tttaagttttaagtttgtaacatgttgctcatttaagttattttggtctcaaataaatcctttaagtttgtaaacgttttcgatttagtcattctatta 37642955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 35461496 - 35461597
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||| |||||||||| |||||||| |||||||| ||||||||||||||| || |||    
T  35461496 tcctgtaagtttgaagtttgtaacagattggtcctttaaattattttgatcacaaataagtcctttaagtttgtaaaagttttcgatttagtccttatat 35461595  T
Q  357 ta 358  Q
    ||    
T  35461596 ta 35461597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 28559513 - 28559417
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattc 353  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| |||| |||||||| ||| ||||||||||| ||||||||||||    
T  28559513 tcctttaagtttgaggtttataacagattggtcctttaaattattttagtcacacataagtcctttaagtttataaacgttttcaatttagtcattc 28559417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 256 - 349
Target Start/End: Original strand, 1996201 - 1996294
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||| |||| ||| ||||||||||||||| ||||||||    
T  1996201 atcctttaagtttggggtttgtaatagattagtcctttaagttattttggtcacacataagtcctataagtttgtaaacgttttcaatttagtc 1996294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 355
Target Start/End: Complemental strand, 17400824 - 17400724
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt--cacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| ||||||||||||||||||| |||||| |||||||  |||| |||| |||||||||||||||||||||||| |||||||| ||||    
T  17400824 tcctttaagtttgagttttgtaacagattggtcctgtaagttgttttggtcacacacataagtcctttaaatttgtaaacgttttcaatttagtccttct 17400725  T
Q  355 a 355  Q
    |    
T  17400724 a 17400724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 20927905 - 20928006
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||| |||||||||||||| | ||||||| ||||||||||||||||||||| ||| || ||||| ||||||||| |||||||||||||| ||||||    
T  20927905 tcctttaaatttgaggtttgtaataaattggtcatttaagttattttggtcacaagtaagtcttttaagtttgtaaacattttcgatttagtccttctat 20928004  T
Q  357 ta 358  Q
    ||    
T  20928005 ta 20928006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 25456550 - 25456454
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || ||||| ||| |||| ||||| |||||| || |||||    
T  25456550 ctttaagtttgaggtttgtaatagattggtcctttaagttattttggtcacaaagaattcttttaagtttttaaaagtttttgatttaatccttcta 25456454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 348
Target Start/End: Original strand, 7209845 - 7209939
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||| ||||||||||||||| | ||  ||| |||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||    
T  7209845 ggatcctttatgtttgaggtttgtaataaatacgtcatttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagt 7209939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 38682878 - 38682785
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||| ||| |||| || ||||| ||||||||| |||||||||||||| ||||    
T  38682878 ttaagtttgaggtttgtaatagattgatccttaaagttattttggttacacataagtcttttaagtttgtaaacattttcgatttagtctttct 38682785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 35461773 - 35461701
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || ||||| ||||    
T  35461773 tcctttaagtttgaggtttgtaatagattggtcctttaagttattttggtcacacataagtcatttaattttg 35461701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 254 - 358
Target Start/End: Complemental strand, 36760878 - 36760774
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattc 353  Q
    ||||||||||||||||||||||||||||||| | |  |||||||||||| ||||||| |||| || ||| | ||||||||| ||||| |||||||| |||    
T  36760878 ggatcctttaagtttgaggtttgtaacagatagataatttaagttatttcggtcacacataagtctttttagtttgtaaacattttcaatttagtccttc 36760779  T
Q  354 tatta 358  Q
    |||||    
T  36760778 tatta 36760774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 14604125 - 14604223
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaa-gttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||||||||| || ||| | ||||||||||||||| |||| |||||||||||||||||  || || |||||||| ||||    
T  14604125 tcctttaagtttgaggtttgtaacagattgatcattttatgttattttggtcacatataagtcctttaaatttgtaaattttatcaatttagtccttct 14604223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 1996430 - 1996333
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||||  ||||  | ||||| |||||||   |||||||||||||||||||    
T  1996430 tcctttaagtttgaggtttgtaagagattgttcctttaaattattttggtcactcataagccatttaagtttgtaaggattttcgatttagtcattct 1996333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 5746157 - 5746246
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||| | | |||| |||||||| ||||||||||||||  |||||||    
T  5746157 ctttaaatttgaggtttataacagattggtcatttaagttattttggtaaaacataagtcctttaagtttgtaaacgttttttatttagt 5746246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 28022223 - 28022130
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||||||| ||| | |||| || |||||||||||||||||||  ||||  ||||||||||||||||| ||||||||||| |||||    
T  28022223 ctttaagtttgaggtttataataaattgatcatttaagttattttggtcacgcataagccctttaaatttgtaaacattttcgatttaatcatt 28022130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 36759665 - 36759758
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||||||| |||||||||||||  || |||||| |||||||||||||  |||| |||||||| |||||||| |||||| |||||||||||    
T  36759665 ctttaagtttgatgtttgtaacagataagttctttaaattattttggtcacttataagtcctttaagtttgtaaatgttttcaatttagtcatt 36759758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 1996142 - 1996214
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| |||||||||||||| |  |||||||||||||||||||| ||||||||||||| ||||    
T  1996142 tcctttaagtttgagatttgtaacagattgatattttaagttattttggtcacatataaatcctttaagtttg 1996214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 35461436 - 35461508
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||| |||| ||| ||||    
T  35461436 tcctttaagtttgaggtttgtaatatattggtcctttaagttattttggtcacacataagtcctgtaagtttg 35461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 37643071 - 37642979
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||  |||| ||||||||| |||||  ||||||| ||||||||||||||||||| |||||||| |||||||||| |||||| ||||||    
T  37643071 tcctttaacattgatgtttgtaacggattgaccctttaaattattttggtcacaaataagtcctttaagtttgtaaacggtttcgaattagtc 37642979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 4943178 - 4943075
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaa-tttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||  ||| |||||||||| |||||| ||||||||||||||||| |||| | |||| || ||||||||| ||||| |||||||||||||    
T  4943178 tcctttaagtttgaaatttataacagattgatccttttaagttattttggtcacacataagttcttttaagtttgtaaacattttcaatttagtcattct 4943079  T
Q  355 atta 358  Q
    ||||    
T  4943078 atta 4943075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 10827170 - 10827263
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||| | | | |||||||| |||||||||| ||| ||||||||| |||||    
T  10827170 tttaagtttgagttttgtaacagattggt-ctttaagttattttggtcac-atttagtcctttaagtttgtaaacggtttagatttagtccttcta 10827263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 12774428 - 12774329
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaa-tcc-tttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| ||| ||||| |||| || |||||||||||||||||||  ||||| ||| ||||| ||||||||||||||| |||||||||||||    
T  12774428 tcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataaagtccttttaagtttgtaaacgttttcaatttagtcattct 12774329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 35461710 - 35461615
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    ||||| |||||| |||||||||||||| || ||||||||||||| ||||||||||| || ||||| |||||||||| ||||   ||||||||||||    
T  35461710 tttaattttgagatttgtaacagattgatcatttaagttatttttgtcacaaataactcttttaagtttgtaaacgctttcatattagtcattcta 35461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 25456609 - 25456540
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||| |||||| ||||    
T  25456609 ctttaagtttgaggtttgtaacagattggt-ctttaagttattttagtcacacataaatactttaagtttg 25456540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 35812190 - 35812092
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    |||||||||||| |||||||| ||||| ||||  ||||||||||||||||| ||||||| ||||||||| ||||  ||||   ||||||||||||||||    
T  35812190 tttaagtttgagatttgtaactgattgatcctcgaagttattttggtcacacataaatcatttaaatttataaatatttttattttagtcattctatta 35812092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 20928150 - 20928081
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||| |||||||||| ||||||||| |||||||||||||||||||||||| |||| |||||||| ||||    
T  20928150 tttaactttgaggtttataacagatttgtcctttaagttattttggtcacacataagtcctttaagtttg 20928081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 33491572 - 33491669
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| ||||||||||   ||| |||||||||||||||||| ||||| |||| |||||||| ||||||||  ||||| |||||||| ||||    
T  33491572 tcctttaagtttaaggtttgtaatcaattagtcctttaagttattttgatcacagataagtcctttaactttgtaaaaattttcaatttagtccttct 33491669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 12713164 - 12713065
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc--tttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| ||| ||||| |||| || |||||||||||||||||||  |||||  |  ||||| ||||||||||||||| |||||||||||||    
T  12713164 tcctttaagtttgagatttctaacatattgatcttttaagttattttggtcacgcataaagtctttttaagtttgtaaacgttttcaatttagtcattct 12713065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 17400884 - 17400812
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||| |||| |||||||| ||||    
T  17400884 tcctttaagtttgagatttgtaacatattggtcatttaagttattttgatcacacataagtcctttaagtttg 17400812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 38680630 - 38680702
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||| ||||||  |||||||||||||||||||||| ||||||| ||||| ||||    
T  38680630 tcctttaagtttgaagtttgtaatagattgaccctttaagttattttggtcacacataaatcttttaattttg 38680702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 315
Target Start/End: Complemental strand, 4943304 - 4943241
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||| ||||    
T  4943304 atggatcctttaaatttgaggtttgtgatagattggtcatttaagttattttggtcacacataa 4943241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 23662215 - 23662144
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||| | |||||| ||||    
T  23662215 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataagttctttaagtttg 23662144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 19550409 - 19550359
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattt 302  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  19550409 atgggtcctttaagtttgaggtttgtaacagattgttcctttaagttattt 19550359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 28559235 - 28559281
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttatttt 303  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  28559235 tcctttaagtttgacgtttgtaacagattggtcctttaagttatttt 28559281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 1649406 - 1649341
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| ||||  |||| ||||||||    
T  1649406 ctttaagtttgaggtttgtaacagattgatccattaagttattttgatcactcataagtcctttaa 1649341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 334
Target Start/End: Original strand, 13170001 - 13170070
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaac 334  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||    ||||||||||||||||||||||    
T  13170001 tttaagtttgaggtttgtaataaattggtc-tttaagttattttggtca----taaatcctttaaatttgtaaac 13170070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 23796373 - 23796430
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||| ||| ||||    
T  23796373 cctttaagtttgaggtttgtaataaattggtcctttaagttattttggttacacataa 23796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 25456271 - 25456347
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||| |||||||||||| |||||||||||| |||||||| ||||||||||||| ||||| |||| |||||||| ||||    
T  25456271 atgggtcctttaagttttaggtttgtaacatattggtcc-ttaagttattttgatcacacataagtcctttaagtttg 25456347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 348
Target Start/End: Original strand, 17400607 - 17400695
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||  ||||||||| |||||||||||||||| ||||| || || |||| ||||||||  ||| |||||||||| |||||||    
T  17400607 tttaagtttgaaatttgtaacaaattggtcctttaagttcttttgatctcacataagtcctttaaggttgcaaacgttttcaatttagt 17400695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 346
Target Start/End: Original strand, 29331956 - 29332017
Alignment:
Q  281 agattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||| |||||||||||||||| ||||    ||||||||||||||||||||||||||||||||||    
T  29331956 agattgatcctttaagttatttttgtca----taaatcctttaaatttgtaaacgttttcgattta 29332017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 40980711 - 40980783
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||| ||||| |||| | |||||| ||||    
T  40980711 tcctttaagtttgaggtttgtaatagattgatcatttaagttattttgatcacacataagtactttaagtttg 40980783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 346
Target Start/End: Complemental strand, 14604341 - 14604254
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||| ||| | |||||||| |||||||||||||||||||||||||||||| |||| | | ||||  ||||||||  ||||||||||    
T  14604341 ctttaaatttaaagtttgtaatagattggtcctttaagttattttggtcacacataagttcgttaagattgtaaactatttcgattta 14604254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 5746381 - 5746287
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||| ||||||||||||||| |||  || ||||| |||||||||||| | |||| || ||||| ||||||||||||||  |||||||| ||||    
T  5746381 tttaagcttgaggtttgtaacaaattaatcttttaaattattttggtcatacataagtcatttaagtttgtaaacgtttttaatttagtctttct 5746287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 10074257 - 10074211
Alignment:
Q  262 taagtttgaggtttgtaacagattggtcctttaagttattttggtca 308  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||    
T  10074257 taagtttgaggtttgtaacagattgttcatttaagttattttggtca 10074211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 10827440 - 10827378
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||||||||||||||||||| | |||||||||||||||| ||||||||||  |||| ||||||    
T  10827440 tttaagtttgaggtttgtaataaattggtcctttaagttgttttggtcactcataagtccttt 10827378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 19550101 - 19550171
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||||| ||| |||| || ||||| ||||    
T  19550101 ctttaagtttgaggtttgtaatagattgattctttaagttattttggtgacacataagtcttttaagtttg 19550171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 23661881 - 23661951
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||||| ||| |||| |||||||| ||||    
T  23661881 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23661951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 23796689 - 23796619
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||| ||||| ||||||||||||||| || |||||||||||||||| ||| |||| |||||||| ||||    
T  23796689 ctttaaatttgacgtttgtaacagattgatcttttaagttattttggttacacataagtcctttaagtttg 23796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 35813638 - 35813568
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||| ||||||||| |||||||||||||||| ||  |||||||||||||||| ||| |||| ||||||||    
T  35813638 ggatcatttaagtttaaggtttgtaacagattagttatttaagttattttggttacacataagtcctttaa 35813568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 1996487 - 1996418
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||| ||||||||| |||| | |||||||||| || |||| |||||||| ||||    
T  1996487 tttaagtttgaggtttgtaatagattggtcatttatgatattttggtctcagataagtcctttaagtttg 1996418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 4943235 - 4943166
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||| ||||||||| |||||| |||||| |||||||| ||||| |||| |||||||| ||||    
T  4943235 tttaagtttgagatttgtaacatattggtactttaaattattttgatcacacataagtcctttaagtttg 4943166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 20927848 - 20927917
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||| ||||||| |||||| || ||||||||||||| || ||| |||| |||||||||||||    
T  20927848 tttaagtttgagatttgtaatagattgatcatttaagttattttagttacacataagtcctttaaatttg 20927917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 23661939 - 23662029
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||  ||||| |||||||| |  |||||||||||||||||||| |||| || ||||| |||||||| |||||  ||||||||    
T  23661939 tcctttaagtttgatatttgtgacagattgat--tttaagttattttggtcacacataagtcttttaagtttgtaaaagttttaaatttagtc 23662029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 23796631 - 23796541
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||  ||||| |||||||| |  |||||||||||||||||||| |||| || ||||| |||||||| |||||  ||||||||    
T  23796631 tcctttaagtttgatatttgtgacagattgat--tttaagttattttggtcacacataagtcttttaagtttgtaaaagttttaaatttagtc 23796541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 16327098 - 16327170
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||| ||||||||||| |||||| || ||||||||||||| ||| || |||| |||||||| ||||    
T  16327098 tcctttaagttagaggtttgtaatagattgatcgtttaagttattttagtcgcacataagtcctttaagtttg 16327170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 23662154 - 23662063
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||| |||  | |||| ||||| || |||||||| |||||| ||||||||    
T  23662154 ctttaagtttgagatttgtaacaaattggttcttttaagttatttttgtcgtacataactccttcaagtttgtaaaagttttcaatttagtc 23662063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 348
Target Start/End: Complemental strand, 35813575 - 35813485
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||| |||||||||||||||||| ||  |||||||||||||| ||| | |||| || |||||  ||||||| |||||| |||||||    
T  35813575 tcctttaagtgtgaggtttgtaacagatttgt-ttttaagttattttgctcatacataagtcatttaagattgtaaatgttttcaatttagt 35813485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 20181404 - 20181498
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||| ||||||| |||||| |||||| || |||| ||||||||||||| | |||| || ||||| |||||||| |||||| |||| ||| ||||    
T  20181404 tttaaatttgagggttgtaatagattgatcatttatgttattttggtcaaatataagtcatttaagtttgtaaatgttttcaattttgtccttct 20181498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 32361168 - 32361226
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||| ||||| |||||||| |||||| || |||||||||||||||||||| ||||    
T  32361168 tcctttaaatttgaagtttgtaatagattgatcatttaagttattttggtcacacataa 32361226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 32361231 - 32361317
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||| |||||||||| ||| |||| ||||||||||||||||| | |||| |  |||||| ||| ||| |||||| |||||    
T  32361231 tttaagtttgaagtttgtaacaaattagtcccttaagttattttggtcatacataagttatttaaagttgaaaatgttttcaattta 32361317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 6190697 - 6190738
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagtt 298  Q
    ||||| |||||||||||||||||||||| |||||||||||||    
T  6190697 tccttaaagtttgaggtttgtaacagatgggtcctttaagtt 6190738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 19550355 - 19550259
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||| |||||||| ||||||||||||||| || |||||||||| |||||| ||  ||| || ||||| || |||||| ||||| |||||||| ||||    
T  19550355 tccttcaagtttgatgtttgtaacagattgatcttttaagttatcttggtcccacgtaactcatttaagttagtaaac-ttttcaatttagtccttct 19550259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 354
Target Start/End: Complemental strand, 7210309 - 7210245
Alignment:
Q  290 ctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||  || |||| || ||||| ||||||||||||||  |||||||||||||    
T  7210309 ctttaagttattttggttgcacataagtcatttaagtttgtaaacgttttaaatttagtcattct 7210245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 332
Target Start/End: Original strand, 7932760 - 7932840
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||| ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  7932760 atgggtcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 7932840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 14604396 - 14604332
Alignment:
Q  264 agtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaattt 328  Q
    |||||||| || ||||||||||  || ||||||||||||||||||||  ||||| ||||||||||    
T  14604396 agtttgagattcgtaacagattaatcttttaagttattttggtcacacctaaattctttaaattt 14604332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 28559573 - 28559501
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||||| ||| ||||||||   ||||||||||||| | || |||||||| ||||    
T  28559573 tcctttaagtttgatgtttgtaacaaattagtcctttatagtattttggtcacacacaagtcctttaagtttg 28559501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 35187994 - 35188042
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    |||||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  35187994 tttaagttattttggtcacacataaatcatttaagtttgtaaacatttt 35188042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 309
Target Start/End: Complemental strand, 35812253 - 35812201
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcac 309  Q
    |||||||| ||| | |||||||| ||||||||||||||| |||||||||||||    
T  35812253 tcctttaaatttaaagtttgtaatagattggtcctttaaattattttggtcac 35812201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 6013567 - 6013642
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  6013567 tcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 6013642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 6014086 - 6014012
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||||||||||  |||||||||||| |||||||||||||  ||| || ||| |||| |||||||| |||||||    
T  6014086 tcctttaagtttgac-tttgtaacagataggtcctttaagtttgttttgtaacagataagtcctttaactttgtaa 6014012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 7933284 - 7933209
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||||| ||||||||||||| |||| ||||||||  ||| || ||| |||  |||||||| |||||||    
T  7933284 tcctttaagtttgacgtttgtaacagataggtcatttaagtttgttttgtaacagataggtcctttaactttgtaa 7933209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 329
Target Start/End: Original strand, 17400542 - 17400616
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||| |||||||||||| ||||| | |||||| |||||||||||||| |||||| |||| || ||||| ||||    
T  17400542 ggatcctctaagtttgaggtgtgtaataaattggttctttaagttatttt-gtcacacataagtcttttaagtttg 17400616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 35813386 - 35813449
Alignment:
Q  295 agttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||| |||||| |||| |||||||| ||||||||||||||| || ||||| || |||||    
T  35813386 agttattttagtcacacataagtcctttaagtttgtaaacgttttcaatatagtctttttatta 35813449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 329
Target Start/End: Original strand, 5746121 - 5746167
Alignment:
Q  283 attggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||| |||||||||||||||||||| |||| | |||||||||||    
T  5746121 attggtcatttaagttattttggtcacacataagttctttaaatttg 5746167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 16327434 - 16327388
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttatttt 303  Q
    ||||||||||||||||||||||| |||||  || |||||||||||||    
T  16327434 tcctttaagtttgaggtttgtaatagattaatcatttaagttatttt 16327388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 345
Target Start/End: Original strand, 38680719 - 38680773
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattt 345  Q
    |||||||||||||||| | | | ||||||||||||||||||||| ||||| ||||    
T  38680719 tttaagttattttggttatacaaaaatcctttaaatttgtaaacattttcaattt 38680773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 42991658 - 42991699
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagtt 298  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  42991658 tcctttaagtttgacgtttgtaacagatatgtcctttaagtt 42991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 1649526 - 1649473
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||||| |||||||||||| |||| |  |||||||||||||| |||||    
T  1649526 gatcctttaagtttaaggtttgtaacatattgat--tttaagttattttgatcaca 1649473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 14604072 - 14604137
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||| |||||||||||||| |||||| ||    ||||||||||||||||| |||| |||||||| ||||    
T  14604072 tttaaatttgaggtttgtaatagattgatc----aagttattttggtcacacataagtcctttaagtttg 14604137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 15207630 - 15207694
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||| | |||| ||| |||||| |||||||||||||||||  |||| | |||||||||||    
T  15207630 tttaagttttatgtttataatagattgatcctttaagttattttgaacacacaaaaatcctttaa 15207694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 321
Target Start/End: Complemental strand, 37033036 - 37032971
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctt 321  Q
    ||||| |||||||||||| ||| | ||||||| ||  |||||||||||||||||||| |||| |||||    
T  37033036 ggatcttttaagtttgagatttatgacagattagt--tttaagttattttggtcacacataagtcctt 37032971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 36374863 - 36374964
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||||||||||| |||| ||| ||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  36374863 tcctttaagtttgaggtttgcaacaaattagtcctttaaataattttggtcacaaataaatcctttaaatttgtaaaagttttcgatttagtcattttat 36374962  T
Q  357 ta 358  Q
    ||    
T  36374963 ta 36374964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 252106 - 252204
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| |||||    
T  252106 tcctttaagtttaaggtttgtaacagatcagtcttttaagttattttggtcacaaataagtcctttaagtttgtaaacgttttcgatttggtccttcta 252204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 36667357 - 36667260
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||| |||||||||||  ||||||||||||||||    
T  36667357 tcctttaagtttaaggtttgtaacagatttgtcctttaagttattttggtcacacataagtcttttaagtttgtaaacgtagtcgatttagtcattct 36667260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 47069806 - 47069711
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||| |||||| |||| |||||||| ||||||||||||||| |||||||||||    
T  47069806 tcctttaagtttgaggtttgtaacagattggtcatttaagtgaatttcgtcacatataagtcctttaagtttgtaaacgttttcaatttagtcatt 47069711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 256 - 354
Target Start/End: Original strand, 43650043 - 43650141
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||| ||||| ||||||| ||||| ||||||||| |||||||||||||| ||||    
T  43650043 atcctttaagtttgaggattgtaagagattggtcatttaagttattttgatcacacataaatcttttaagtttgtaaacattttcgatttagtctttct 43650141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 14964890 - 14964986
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| |||||||| |||||||| |||||| |||||||| ||||    
T  14964890 tcctttaagtttgag-tttgtaacagattggtcatttaagttattttggtcacacataagtcctttaagtttgtaaaggttttcaatttagtccttct 14964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 25848347 - 25848444
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||| | ||||| ||||| ||||||||||||| |||||||||| ||||    
T  25848347 tcctttaagtttgaggtttgtaatagattagtccgttaagttattttggtcacacaaaaatcttttaagtttgtaaacgtttgcgatttagtccttct 25848444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 13903082 - 13902990
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||| |||||||||||||| ||| ||| |||||||||||||||| ||| |||| |||||||||||||||||||||||| |||||||    
T  13903082 atcctttaagtctgaggtttgtaacatattagtcttttaagttattttggttacatataagtcctttaaatttgtaaacgttttcaatttagt 13902990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 47891397 - 47891305
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||||||||||| |||| || ||||| ||||||||||||||| ||||||||    
T  47891397 tcctttgagtttgaggtttgcaacatattggtcctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttcaatttagtc 47891305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 25848575 - 25848478
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||  |||||||| |||||||| |||||| |||||||| ||||    
T  25848575 tcctttaaattttaggtttgtaacacattggtcctttaagttattttggtcacacatatgtcctttaagtttgtaaatgttttcaatttagtccttct 25848478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 26976376 - 26976477
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||| | ||||| ||||| ||||||| ||||||| |||||| | ||||||    
T  26976376 tcctttaagtttgaggtttgtaacagataggtcctctaagttattttggttacacaaaaatcttttaagtttgtaatcgttttcaatttagaccttctat 26976475  T
Q  357 ta 358  Q
    ||    
T  26976476 ta 26976477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 32186750 - 32186658
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||| ||| |||||| |||||| ||||||||||||||| ||||||||    
T  32186750 tcctttaagtttgaggtttgtaacatattgatgttttaagttattttggttacacataaattctttaagtttgtaaacgttttcaatttagtc 32186658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 47891172 - 47891264
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||| || || | || ||||| |||||||| ||||||||||||||||||    
T  47891172 tttaagtttgaggtttgtaccagattgatcctttaagttattttggtcgcatattagtcttttaagtttgtaaatgttttcgatttagtcatt 47891264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 347
Target Start/End: Complemental strand, 39541506 - 39541415
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttag 347  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||| ||| ||||| ||||||||  ||||||||||||    
T  39541506 tcctttaagtttgaggtttgtaacggattgatcctttaagttattttggtcacatataagtccttttaagtttgtaaatattttcgatttag 39541415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 348
Target Start/End: Original strand, 40286298 - 40286389
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||||||||| ||||| |||| ||||||||||||||||||||||| | || |||||||| ||||||||  |||||||||||||    
T  40286298 tcctttaagtttgaggtttataacatattgttcctttaagttattttggtcacacagaagtcctttaagtttgtaaatattttcgatttagt 40286389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 26724070 - 26724167
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| || ||||||| ||||| ||| |||||||||||||||||||| |||| |||||||| ||| |||| |||||| |||||||||||||    
T  26724070 tcctttaagtttaagatttgtaaaagattagtcatttaagttattttggtcacatataagtcctttaagtttataaaagttttcaatttagtcattct 26724167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 36900151 - 36900054
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| |||||||||| |||||| || |||||||||||||  || || ||||||||||||| ||||||||| ||||| |||||||||||||    
T  36900151 tcctttaagtttaaggtttgtaagagattgatcgtttaagttattttaatctcacataaatcctttaagtttgtaaacattttcaatttagtcattct 36900054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 46337562 - 46337651
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||| |||||||||| |||  | ||||||||||||||||||||| ||||||||||||| ||||||||  |||||||||||    
T  46337562 tcctttaagtttgaagtttgtaacatattaattctttaagttattttggtcacagataaatcctttaagtttgtaaaaattttcgattta 46337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 348
Target Start/End: Original strand, 5442515 - 5442607
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt-aaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||| || ||| ||||||||||| |||||| |||||||    
T  5442515 tcctttaagtttgaggtttgtaaatgattcgtcctttaagttattttggtcacagataagtcttttaaaatttgtaaatgttttcaatttagt 5442607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 40286524 - 40286425
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||  |||| | |||||| ||||||||| ||||| |||||||  ||||||    
T  40286524 tcctttaagtttgaggtttgtaacagattggtcttttgagttattttagtcac--ataagttctttaagtttgtaaacattttcaatttagttcttctat 40286427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 47573969 - 47573884
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||||||| |||| | |||||| || |||||||||||| |||||    
T  47573969 tttaagtttgaggtttgtaatagattgatcctttaagttattttggtcacatataagt-ctttaagttcgtaaacgttttcaattta 47573884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 28813899 - 28813988
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||| ||||||| | |||| || |||||||||||||||||||| |||| ||||| || ||||||||||||||| |||||||    
T  28813899 ctttaagtttgagatttgtaataaattgatcatttaagttattttggtcacacataagtccttcaagtttgtaaacgttttcaatttagt 28813988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 36667141 - 36667229
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||||||||| ||||| |||  ||||||||||||||||||| || |||| |||| |||||||||||||||| ||||||||    
T  36667141 tttaagtttgaggtttgtaagagattagtctcttaagttattttggtcacacat-aatcttttagatttgtaaacgttttcaatttagtc 36667229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 348
Target Start/End: Original strand, 47069590 - 47069679
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||| ||||||||| |||||| |||| |||||||||||||||| |||| |||||| | || |||||||||||| |||||||    
T  47069590 ctttaagtttgagttttgtaacaaattggttcttttagttattttggtcacacataagtcctttgagttcgtaaacgttttcaatttagt 47069679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 18020099 - 18020007
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||| |||||| ||||||||||||| |||||||||||||||| ||| |||| || ||||| |||| |||| ||||| ||||||||    
T  18020099 tcctttaagtttaaggtttataacagattggtcgtttaagttattttggttacacataagtcttttaagtttgcaaaccttttcaatttagtc 18020007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 26724347 - 26724275
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||| |||||| |||| |||||||||||||    
T  26724347 tcctttaagtttgaggtttgtaatagattgattctttaagttattttcgtcacacataagtcctttaaatttg 26724275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 32186525 - 32186620
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||||||| |||| ||| | || ||||||||||||| || ||| |||| |||||||| ||| |||||||||||||||||||| |||||    
T  32186525 tttaagtttgaggtttataactgatcgatcatttaagttatttttgtaacacataagtcctttaagtttttaaacgttttcgatttagtccttcta 32186620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 26976573 - 26976491
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    ||||||||||||||| ||||||||| ||  |||||||||||||||||||||||| |||| || ||||| |||||||| |||||    
T  26976573 tcctttaagtttgagctttgtaacatataagtcctttaagttattttggtcacacataagtcatttaagtttgtaaatgtttt 26976491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 348
Target Start/End: Original strand, 50332501 - 50332584
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||||||    ||||||||||||||||||||||||| ||||| |||| || ||||| ||||||||||||||| |||||||    
T  50332501 ttaagtttgaggttt----cagattggtcctttaagttattttgatcacatataagtcatttaagtttgtaaacgttttcaatttagt 50332584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 47069528 - 47069600
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| ||||| |||| | |||||| ||||    
T  47069528 tcctttaaatttgaggtttgtaacatattggtcctttaagttattttgatcacacataagttctttaagtttg 47069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 45131439 - 45131514
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||||||||||||||||||||| || ||||||||||||| || ||| |||| || ||||| |||||||    
T  45131439 tcctttaagtttgaggtttgtaacagattgatcatttaagttatttttgtaacatataagtcttttaagtttgtaa 45131514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 3169715 - 3169785
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||| |||||||||| |||||||| |||||||||||||| |||||| ||||||| ||||| ||||    
T  3169715 ctttaagtttaaggtttgtaatagattggttctttaagttattttagtcacatataaatcttttaagtttg 3169785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 25848285 - 25848359
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||| ||||||| | |||| ||||||||||||||||||||||| | || |||||||| ||||    
T  25848285 gatcctttaagtttgagatttgtaataaattgatcctttaagttattttggtcacacacaagtcctttaagtttg 25848359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 350
Target Start/End: Original strand, 27768369 - 27768459
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtca 350  Q
    ||||||| ||| |||||||| |||||  || |||| ||||||||| ||||| ||||||||||||| ||||||||||||||  |||||||||    
T  27768369 tttaagtatgatgtttgtaaaagattaatcatttatgttattttgatcacacataaatcctttaagtttgtaaacgttttaaatttagtca 27768459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 252048 - 252113
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||||||||||  ||| ||||||||    
T  252048 ctttaagtttgaggtttataatagattggtcatttaagttattttggtcacacgtaagtcctttaa 252113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 32186462 - 32186515
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  32186462 tcctttaagtttgaggtttgtaatatattggtcctttaagctattttggtcaca 32186515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 46337505 - 46337574
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||| |||| | |||||| |||||||||||||| |||| |||||||| ||||    
T  46337505 tttaagtttgaggtttgtaacatattgattctttaaattattttggtcacacataagtcctttaagtttg 46337574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 50332710 - 50332614
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||| ||| |||  |||| ||||||||||| | |||| |||||| |||||| |||||||| |||||| ||||| |||||||    
T  50332710 tcctttaagtttgaggtttgttacaaattaatcctctaagttatttttgccacacataaat-ctttaactttgtaaaagttttcaatttaatcattct 50332614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 353
Target Start/End: Original strand, 3377028 - 3377124
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattc 353  Q
    |||||||||||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||| || | | ||||||||||||    
T  3377028 tcctttaagtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaaaagtgtacaatttagtcattc 3377124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 40209948 - 40209855
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| |  |||||||||||  |||||| ||||||||||||| |||| || ||||| |||| ||| |||||| |||||||||||||    
T  40209948 ctttaagtttgaggtctcgaacagattggt--tttaagatattttggtcacacataagtcgtttaagtttgcaaaagttttcaatttagtcattct 40209855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 18020159 - 18020092
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||| |||||| |  |||||||||||||||||| | |||| ||||||||    
T  18020159 tcctttaagtttgaggtttgtaatagattgattatttaagttattttggtcaaacataagtcctttaa 18020092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 28814073 - 28814022
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  28814073 ctttaagtttgaggtttgtaatagattggtcatttaagttaatttggtcaca 28814022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 36375075 - 36374982
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| ||| ||| ||||||  ||||||| ||||||||||||||||||| |  ||||| |||||||||||||||||||| ||| |||||    
T  36375075 tttaagtttgagatttataatagattga-cctttaaattattttggtcacaaataagtt-tttaagtttgtaaacgttttcgatttggtcgttcta 36374982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 39714694 - 39714632
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    ||||||||||||||||| |||||||||| |  |||||||||||||||||||| |||||||||||    
T  39714694 ctttaagtttgaggtttttaacagattgatg-tttaagttattttggtcacacataaatccttt 39714632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 30955023 - 30954957
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatccttt 322  Q
    ||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||| |||| ||||||    
T  30955023 tcctttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagtccttt 30954957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 30970835 - 30970769
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatccttt 322  Q
    ||||||| ||||||| ||||||| |||||||||| |||||||||||||||||||| |||| ||||||    
T  30970835 tcctttatgtttgagatttgtaagagattggtccttttaagttattttggtcacacataagtccttt 30970769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 254 - 324
Target Start/End: Complemental strand, 36900214 - 36900144
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||| ||||||||||||| ||| ||| |||||||||||||||||||||||||| ||| |||  ||||||||    
T  36900214 ggattctttaagtttgagatttataatagattggtcctttaagttattttggttacacataggtcctttaa 36900144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 40209738 - 40209831
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||| |||||||||| ||| |||||| || |||||||| ||||| ||||| |||| || ||||| ||||||||||||||| ||||||| |||||    
T  40209738 tttaaatttgaggtttctaatagattgatcttttaagttgttttgttcacacataagtc-tttaagtttgtaaacgttttcaatttagttattct 40209831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 43649990 - 43650056
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||| ||||||| | ||||||| ||||||||||||| |||||| ||||||||||||| ||||    
T  43649990 aagtttgagatttgtaataaattggtcttttaagttattttcgtcacacataaatcctttaagtttg 43650056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 47573758 - 47573856
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||| | |  |||| || ||||| ||||||||   |||| |||||||| ||||||||    
T  47573758 tttaagtttgaggtttgtaacatattgatcctttaaattattttggccgctcataagtcatttaagtttgtaaaaaatttcaatttagtccttctatta 47573856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 273 - 354
Target Start/End: Original strand, 3169544 - 3169625
Alignment:
Q  273 tttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||| |||||||||||||||||||||||||| | | |  || ||||| |||||||| |||||| |||||||| ||||    
T  3169544 tttgtaacatattggtcctttaagttattttggtcatacacaggtcttttaagtttgtaaatgttttcaatttagtctttct 3169625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 13903139 - 13903074
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||| |||||||||||||||| |||  |||||||||||||||||||  || |||||||||||||    
T  13903139 ctttaaatttgaggtttgtaacatattaatcctttaagttattttggttgcacataaatcctttaa 13903074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 14624107 - 14624207
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||| |||||||||   | |||||||| ||||||||||| |||| || ||||| | ||||||  ||||| |||||||| ||||||    
T  14624107 tcctttaagtttgaggtttataacagattaaacatttaagtt-ttttggtcacacataagtcatttaagtctgtaaatattttcaatttagtccttctat 14624205  T
Q  357 ta 358  Q
    ||    
T  14624206 ta 14624207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 47573690 - 47573767
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||| ||||||||||||||||||||||||| ||| ||||||||| |||||||  ||||| |||| || ||||| ||||    
T  47573690 atgggtcctttaagtttgaggtttgtaacatattagtcctttaaattatttttatcacacataagtcttttaagtttg 47573767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 322
Target Start/End: Complemental strand, 47891457 - 47891392
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    ||||||||||||||  ||||||||| |||| ||||||||||||||||| ||||| |||| ||||||    
T  47891457 tcctttaagtttgaaatttgtaacaaattgatcctttaagttattttgatcacacataagtccttt 47891392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 39714633 - 39714545
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||||||||||||||||||| | |||| || ||||| |||||||| | ||| |||| || ||| | ||||||||||||||| |||||||    
T  39714633 tttaagtttgaggtttgtaataaattgatcatttaaattattttgattacacataagtcatttgagtttgtaaacgttttcaatttagt 39714545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 43650271 - 43650175
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa-atttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||| | ||||| ||||  |||||||||||||||||||| ||| |||| |||||||| |||||||||  ||||| | |||||| ||||    
T  43650271 ctttaagtttgagatatgtaatagatgagtcctttaagttattttggtaacacataagtcctttaagatttgtaaatcttttcaacttagtccttct 43650175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 50332770 - 50332698
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||| | |||| || |||||||||||||||| ||| |||| |||||||| ||||    
T  50332770 tcctttaagtttgatgtttgtaataaattgatcttttaagttattttggttacacataagtcctttaagtttg 50332698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 7607759 - 7607673
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttag 347  Q
    ||||||||||| |||||||||| |||| |  |||||||||||||||||||  |||| || ||||| ||| ||||||||||| ||||||    
T  7607759 tttaagtttgatgtttgtaacatattgatt-tttaagttattttggtcacgcataagtcttttaagtttctaaacgttttccatttag 7607673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 328
Target Start/End: Complemental strand, 25848635 - 25848564
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaattt 328  Q
    ||||| ||||||||||||||||| | |||| || |||||||||||||  ||||| |||| ||||||||||||    
T  25848635 tccttaaagtttgaggtttgtaataaattgatcttttaagttattttaatcacacataagtcctttaaattt 25848564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 39253793 - 39253844
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||| |||||||||| ||||||||||||| |||||||| |||||    
T  39253793 ctttaagtttgaagtttgtaacaaattggtcctttaacttattttgatcaca 39253844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 321
Target Start/End: Complemental strand, 25848701 - 25848631
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatcctt 321  Q
    |||| ||||||||||||||||||| ||| | |||||||| |||||||||||||||| ||| |||| |||||    
T  25848701 atgggtcctttaagtttgaggtttataataaattggtccttttaagttattttggtaacacataagtcctt 25848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 30955078 - 30955017
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttta 323  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||||||||| |||| |||||||    
T  30955078 ttaagtttgaggtttgtaatagattagtg-tttaagttattttggtcacacataagtccttta 30955017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 30970890 - 30970829
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttta 323  Q
    ||||||||||||||||||| ||||| ||  |||||||||||||||||||| |||| |||||||    
T  30970890 ttaagtttgaggtttgtaatagattagtg-tttaagttattttggtcacacataagtccttta 30970829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 36667454 - 36667404
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  36667454 tttaagtttgaggtttgtaatagattggtcattttagttattttggacaca 36667404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 40286244 - 40286310
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| |||||||||| ||| |||||| ||||||||||| ||||| |||| |||||||| ||||    
T  40286244 aagtttgatgtttgtaacaaattagtccttcaagttattttgatcacacataagtcctttaagtttg 40286310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 348
Target Start/End: Complemental strand, 42866163 - 42866077
Alignment:
Q  262 taagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||| |||||||| | ||||||| ||||||  |||||||||||| |||| ||||| || |||||||| |||||  |||||||    
T  42866163 taagtttgaagtttgtaatatattggtcatttaagaaattttggtcacacataagtccttcaagtttgtaaaagtttttaatttagt 42866077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 338
Target Start/End: Original strand, 27657986 - 27658062
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttt 338  Q
    ||||||||||||||||| ||| ||| ||  ||||||||||||  |||||| ||||||| ||||| |||||||||||||    
T  27657986 ttaagtttgaggtttgtcacacattagtt-tttaagttatttcagtcacacataaatcatttaagtttgtaaacgttt 27658062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 28814135 - 28814063
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| |||||||||||||| ||||| ||| |||||||||||||| ||| | |||| | |||||| ||||    
T  28814135 tcctttaaatttgaggtttgtaatagattagtcttttaagttattttgatcagacataagttctttaagtttg 28814063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 40286584 - 40286512
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| ||||||||||||||| | ||| ||||||||||||||||  || || |||| |||||||| ||||    
T  40286584 tcctttaaatttgaggtttgtaaccgtttgatcctttaagttatttttatcgcacataagtcctttaagtttg 40286512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 47891118 - 47891162
Alignment:
Q  266 tttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||    
T  47891118 tttgaggtttgtaacagattgatcttttaaattattttggtcaca 47891162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 346
Target Start/End: Complemental strand, 14624290 - 14624235
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||| |||||||| |||| || ||||| ||||||||||||||| |||||    
T  14624290 tttaagttattctggtcacacataagtcttttaagtttgtaaacgttttcaattta 14624235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 329
Target Start/End: Original strand, 28813843 - 28813909
Alignment:
Q  262 taagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||| |||||| | ||||||||||||| ||||||| |||| | |||||| ||||    
T  28813843 taagtttgaggtttgtaatagattgat-ctttaagttatttaggtcacatataagttctttaagtttg 28813909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 306
Target Start/End: Complemental strand, 43650335 - 43650284
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    |||||||||||||||| |||||||| | |||| |||||||||||||| ||||    
T  43650335 gatcctttaagtttgaagtttgtaataaattgatcctttaagttattctggt 43650284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 354
Target Start/End: Original strand, 45131519 - 45131590
Alignment:
Q  284 ttggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||| |||||||| |||||| |||| ||| ||||| |||||||| |||||| | |||||||||||    
T  45131519 ttggtcctttatgttatttttgtcacacataagtccttttaagtttgtaaatgttttcaacttagtcattct 45131590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 52288456 - 52288381
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  52288456 tcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 52288381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 36667395 - 36667357
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagt 297  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  36667395 ctttaagtttgaggtttgtaactgattgatcctttaagt 36667357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 27768308 - 27768373
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||| |||||||| || ||| || |||||||||||||| | ||| ||||||| |||||    
T  27768308 ctttaagtttgaagtttgtaataggttgatcatttaagttattttgattacacataaatcttttaa 27768373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 340
Target Start/End: Original strand, 54343350 - 54343398
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttc 340  Q
    |||||||||||||||||||| || || ||||||| |||||||||||||||    
T  54343350 tttaagttattttggtcacatat-aagcctttaagtttgtaaacgttttc 54343398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 3382536 - 3382500
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaa 295  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  3382536 ctttaagtttgacgtttgtaacagataggtcctttaa 3382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 14964854 - 14964882
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggt 288  Q
    |||||||||||||||||||||||||||||    
T  14964854 tttaagtttgaggtttgtaacagattggt 14964882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 420
Target Start/End: Original strand, 31060068 - 31060104
Alignment:
Q  384 ggaacttgtggaacatacaaaatggattcttccattt 420  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  31060068 ggaacttgtgggacatacaacatggattcttccattt 31060104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 36374798 - 36374854
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtca 308  Q
    |||||| ||||||||||||||||||| | | ||| ||| ||||| ||||||||||||    
T  36374798 atggattctttaagtttgaggtttgttataaattagtcatttaaattattttggtca 36374854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 315
Target Start/End: Complemental strand, 40210010 - 40209951
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||||||||| ||| ||||| |||| | |||||| |||||||||||||| ||||    
T  40210010 gatcctttaagtttgagatttctaacatattgat-ctttaatttattttggtcacacataa 40209951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 348
Target Start/End: Complemental strand, 51833481 - 51833393
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||| |||||||| |||||| || | | |||||||||||||| | |||| || |||||  ||||||| ||| || |||||||    
T  51833481 tttaagtttgaagtttgtaatagattgatcatgttagttattttggtcatacataagtcatttaagattgtaaatgttatcaatttagt 51833393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 259 - 354
Target Start/End: Original strand, 31630127 - 31630222
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||||| ||||    
T  31630127 ctttaagtttgaggtttgtaacagattgatcctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttcgatttagtccttct 31630222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 25894965 - 25895063
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||| || |||| |||||||| ||||||||| |||| ||||||||| |||||    
T  25894965 tcctttaagtttgagatttgtaacaaattggtcctttaagttattttggtcgcatataagtcctttaagtttgtaaacatttttgatttagtccttcta 25895063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 261 - 354
Target Start/End: Original strand, 9500969 - 9501062
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||| | | |||||||||||||| |||||| |||| |||||||| |||||||||||||||||||||||| ||||    
T  9500969 ttaagtttgaggtttgtaacagatcgcttctttaagttattttagtcacacataagtcctttaagtttgtaaacgttttcgatttagtccttct 9501062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 259 - 348
Target Start/End: Complemental strand, 5009448 - 5009360
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||||| || |||||||||| ||||||||||||||| |||||||    
T  5009448 ctttaagtttgaggtttgtaacatattgatcctttaagttatttttgtcacacat-aatcctttaagtttgtaaacgttttcaatttagt 5009360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 25895193 - 25895101
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||| |||||| |||| |||||| | ||||||||||||||| ||||||||    
T  25895193 tcctttaagtttaaggtttgtaacagattgaacctttaagttattttagtcacacataagtcctttcagtttgtaaacgttttcaatttagtc 25895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 25895253 - 25895186
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  25895253 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacacaaaagtcctttaa 25895186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 36694589 - 36694494
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||   |||| |||||||| ||||    
T  36694589 ctttaattttgaggtttgtaacagattggtcctttaaattattttggtcacacataagtcctttaagtttgtaaaaaatttcaatttagtctttct 36694494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 11791878 - 11791781
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||| ||||||||||| |||||||| ||||  ||| |||||||||||||||||||| |||| |||| ||| ||||||||||||||| |||||||||||    
T  11791878 gatcttttaagtttgaagtttgtaatagatatgtcatttaagttattttggtcacacataagtcctataagtttgtaaacgttttcaatttagtcatt 11791781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 4189087 - 4188995
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||||||||||||||| | || ||||||||||||||||||| ||||| |||| ||| |||| ||| ||||||||||| |||||||||||    
T  4189087 tttaagtttgaggtttgtaatatataggtcctttaagttattttgatcacatataagtccattaagtttataaacgttttcaatttagtcatt 4188995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 33847770 - 33847698
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||||||||| |||| |||||||||||||    
T  33847770 tcctttaagtttgatgtttgtaacatattgttcctttaagttattttggtcacacataagtcctttaaatttg 33847698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 43699521 - 43699435
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttt 338  Q
    |||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||| |||| || ||||| |||||||| ||||    
T  43699521 atgggtcctttaagtttgaggtttgtaacatattgatcctttaatttattttggtcacacataagtcttttaagtttgtaaatgttt 43699435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 256 - 358
Target Start/End: Original strand, 4188621 - 4188723
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    ||||||||| ||||| |||||||||| ||   ||| ||||||||||||||||||| | || |||||||| ||| ||||||||||| ||||| ||||||||    
T  4188621 atcctttaactttgaagtttgtaacaaataactccattaagttattttggtcacacacaagtcctttaagtttctaaacgttttcaatttattcattcta 4188720  T
Q  356 tta 358  Q
    |||    
T  4188721 tta 4188723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 9500905 - 9500958
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  9500905 tcctttaagttttaggtctgtaacagattggtcctttaagttattttggtcaca 9500958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 44556585 - 44556686
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||||||| | |||| |||||||| |||||||| ||||| |||| |||||||| |||  | |||||||| |||||||  ||||||    
T  44556585 tcctttaagtttgaggtttgtaataaattgatcctttaacttattttgatcacacataagtcctttaagtttacatacgttttcaatttagttcttctat 44556684  T
Q  357 ta 358  Q
    ||    
T  44556685 ta 44556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 3877013 - 3876914
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    |||||| |||||||||||||| | |||| || |||||||||||||||||||| |||| |||||||  | ||||||| ||| | |||||||| ||||||||    
T  3877013 ctttaaatttgaggtttgtaataaattgatcttttaagttattttggtcacacataagtcctttacgtatgtaaacctttccaatttagtccttctatta 3876914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 31630351 - 31630258
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||| ||||||||| |||| ||||||||  |||||||||||||||||||| |||| || ||||| |||||||| |||||| |||||||||||    
T  31630351 tcctttaaatttgaggttagtaatagattggtt-tttaagttattttggtcacacataagtc-tttaagtttgtaaatgttttcaatttagtcatt 31630258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 346
Target Start/End: Original strand, 4511452 - 4511537
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||| |||||||||||||||| ||||||| |||| ||||||||||| ||| |||| || ||||| ||||||||| |||||||||||    
T  4511452 tttaaatttgaggtttgtaaca-attggtcgtttatgttattttggttacacataagtcatttaagtttgtaaacattttcgattta 4511537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 257 - 339
Target Start/End: Complemental strand, 29379970 - 29379888
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    |||||||||||||| |||||||||| ||| ||||||||| |||||||||||||| |||| | ||||||  |||||||| ||||    
T  29379970 tcctttaagtttgacgtttgtaacatattagtcctttaaattattttggtcacacataagttctttaagattgtaaacatttt 29379888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 275 - 349
Target Start/End: Complemental strand, 33847693 - 33847619
Alignment:
Q  275 tgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||| ||||||||||| || |||| |||||||| ||| ||||| ||||| ||||||||    
T  33847693 tgtaacagattggtcctttaaattattttggtcgcatataagtcctttaagtttttaaacattttcaatttagtc 33847619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 323
Target Start/End: Original strand, 1316032 - 1316101
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttta 323  Q
    ||||||||||| |||||||||||||| |||| | || |||||||||||||||||||| |||| |||||||    
T  1316032 ggatcctttaaatttgaggtttgtaatagatagatcgtttaagttattttggtcacacataagtccttta 1316101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 1316095 - 1316176
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttt 338  Q
    ||||||| ||||||||||||||||| ||  || ||||||||||||||| || || |||| |||||||| |||||||||||||    
T  1316095 tcctttatgtttgaggtttgtaacatatatgttctttaagttattttgatcgcacataagtcctttaagtttgtaaacgttt 1316176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 5009160 - 5009232
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||| || ||||| |||||    
T  5009160 ctttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtcatttaagtttgt 5009232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 30265448 - 30265536
Alignment:
Q  266 tttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||| ||||| ||| ||||| ||| |||||||| |||| |||||| |||| | |||||| ||||||||||||||| |||||||||||||    
T  30265448 tttggggtttctaatagattagtcatttaagttctttttgtcacacataagtgctttaagtttgtaaacgttttcaatttagtcattct 30265536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 265 - 348
Target Start/End: Complemental strand, 39442501 - 39442418
Alignment:
Q  265 gtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||| | ||||| ||| ||||||||||||||||| |||||||    
T  39442501 gttttaggtttgtaacagattaatccttttaagttattttggtcacacacaaatc-tttgaatttgtaaacgttttcaatttagt 39442418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 44556525 - 44556597
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||| |||||||||| ||||||||| |||||||| |||| |||||| |||| |||||||| ||||    
T  44556525 tcctttaagtttaaggtttgtaatagattggtcatttaagttttttttgtcacacataagtcctttaagtttg 44556597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 260 - 346
Target Start/End: Complemental strand, 12001876 - 12001792
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||| |||||||||||| |||  | ||||||||||||  ||||||| | || || |||||||||||||||||||||||||||    
T  12001876 tttaagtttcaggtttgtaacaaattaattctttaagttatt--ggtcacacacaagtcttttaaatttgtaaacgttttcgattta 12001792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 358
Target Start/End: Complemental strand, 14166463 - 14166365
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    |||||| ||||||||| |||||| |||| |  |||||||||| ||| ||||| ||||| ||||||| ||| ||||||||||| |||||||| ||||||||    
T  14166463 ctttaactttgaggttcgtaacaaattgatt-tttaagttatcttgttcacacataaaccctttaagtttttaaacgttttcaatttagtccttctatta 14166365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 4511686 - 4511636
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    ||||||||||||||| ||||||||||||||| | |||||||||||||||||    
T  4511686 atcctttaagtttgaagtttgtaacagattgattctttaagttattttggt 4511636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 29380028 - 29379958
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||| | || |||| |||||||| ||||    
T  29380028 ctttaagtttgaggtttgtaataaattggtcatttaagttattttggcctcacataattcctttaagtttg 29379958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 31630409 - 31630339
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||| ||  |||||| || |||||||||||||||||||| | || |||||||||||||    
T  31630409 ctttaagtttgaggtttatagaagattgatcatttaagttattttggtcacacaaaagtcctttaaatttg 31630339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 252 - 329
Target Start/End: Complemental strand, 5009514 - 5009438
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||| | |||||| ||||    
T  5009514 atgggtcctttaagtttgaggtttgtaacatattggtcttttaagtt-tttttgtcacacataagtactttaagtttg 5009438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 36217278 - 36217208
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||||||| |||| || ||||| ||||    
T  36217278 tcctttaagtttgaggtttgtaacaaattgat--tttaagttattttggtcacacataagtcttttaagtttg 36217208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 30265380 - 30265432
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcac 309  Q
    ||||||||||||||||||||||| | |||||||| |||| |||||||||||||    
T  30265380 tcctttaagtttgaggtttgtaataaattggtccattaaattattttggtcac 30265432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 4511942 - 4512005
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| ||||| |||| |||||||| ||||||||| ||||| |||| ||||||||    
T  4511942 tttaagttattttgatcacatataagtcctttaagtttgtaaacattttcaatttcgtcattct 4512005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 14166521 - 14166466
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||| |||||||| |||| |||||||||||||||||| |||||| ||||    
T  14166521 tttaagtttgatgtttgtaatagataggtcctttaagttatttttgtcacacataa 14166466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 36217217 - 36217163
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||||||||||||||||||| | |||||| |||||||||||||| ||||    
T  36217217 tttaagtttgaggtttgtaacagattgat-ctttaaattattttggtcacacataa 36217163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 3876788 - 3876884
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||| ||||||| ||||||| |||| || |||| |||||||| |  ||| |||| || ||||| ||||||||||||||| ||| |||||||||    
T  3876788 tcctttaagattgaggtctgtaacatattgatc-tttatgttatttttgctacacataagtcatttaagtttgtaaacgttttcaattaagtcattct 3876884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 4511396 - 4511461
Alignment:
Q  264 agtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||| ||||||||| |||||||||| ||||| ||| | || || ||||||||||    
T  4511396 agtttgaggtttgtaatagattggtcatttaagttatattggttacacacaagtcatttaaatttg 4511461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 5009222 - 5009320
Alignment:
Q  260 tttaagtttgaggtttgtaacagattg----gtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||| |||||||||||||||     ||| |||||||||||||| ||||| |||| || ||||  |||||||| |||||| |||||||| ||||    
T  5009222 tttaagtttgtggtttgtaacagattaatttgtcatttaagttattttgatcacacataagtcttttatgtttgtaaatgttttcaatttagtccttct 5009320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 332
Target Start/End: Complemental strand, 39641759 - 39641686
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  39641759 ctttaagtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 39641686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 36694381 - 36694470
Alignment:
Q  264 agtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||  ||||||||||||| ||  |||||||||||||||||||| |||| ||| ||||| ||||||||  ||||| |||||||| ||||    
T  36694381 agtttgaaatttgtaacagattagt--tttaagttattttggtcacatataagtccttttaagtttgtaaatattttcaatttagtccttct 36694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 39442297 - 39442392
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||| ||||||||| |||| || ||||| ||| |||||| |||  ||| || ||||| |||||||| || ||| ||||||| ||||||    
T  39442297 tttaagtttgagatttgtaacaaattgatcatttaatttactttggttacatgtaagtcatttaagtttgtaaaggtattcaatttagttattcta 39442392  T

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Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 318
Target Start/End: Complemental strand, 39442562 - 39442505
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatc 318  Q
    |||||||| |||||||||| |||||| ||||||||||||| || || ||| |||||||    
T  39442562 ttaagttttaggtttgtaaaagattgatcctttaagttatgtttgttacacataaatc 39442505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 7e-32; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 257 - 355
Target Start/End: Original strand, 21598505 - 21598603
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||| ||| |||||||||||||||||||| |||||    
T  21598505 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttgatcccacataagtcctttaagtttataaacgttttcgatttagtccttcta 21598603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 21598723 - 21598631
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| ||||||||    
T  21598723 tcctttaagtttgtggtttgtaacatattggtcctttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagtc 21598631  T

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Target: chr6; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 17342715 - 17342621
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  17342715 tttaagtttgaggtttgtaacatgttggtcctttaagttatttcggtcacacataagtcctttaagtttgtaaacgttttcaatttagtcattct 17342621  T

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Target: chr6; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 256 - 347
Target Start/End: Original strand, 35225457 - 35225548
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttag 347  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| || ||||| |||| | |||||| ||||||||||||||||||||||    
T  35225457 atcctttaagtttaaggtttgtaacagattggtcctttaagttattctgatcacacataagttctttaagtttgtaaacgttttcgatttag 35225548  T

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Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 354
Target Start/End: Original strand, 35050594 - 35050693
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||| ||| |||| ||||| ||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||||||||||||| ||||    
T  35050594 gatcctttaagtttgaagttcgtaagagattagtcctttaagttatttttgtcacacataaatcttttaagtttataaacgttttcgatttagtccttct 35050693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 9982730 - 9982827
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| |||||||||||||| |||||| ||||||||||||| || |||| || ||||| ||||||||||||||| |||||||| ||||    
T  9982730 tcctttaagtttgagttttgtaacagattgatcctttgagttattttggtcgcacataagtcttttaagtttgtaaacgttttcaatttagtccttct 9982827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 260 - 349
Target Start/End: Original strand, 17136907 - 17136996
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||||||  | ||||||||||||||||||||| |||| || ||||| ||||||||||||||| ||||||||    
T  17136907 tttaagtttgaggtttgtaacagattaattctttaagttattttggtcacacataagtcttttaagtttgtaaacgttttcaatttagtc 17136996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 24059725 - 24059826
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||| |||||||||| || ||||| |||||||||||||| |||| |||||||| ||||||||||||||  || ||||| ||||||    
T  24059725 tcctttaagtttgaggtttataacagattgatcatttaaattattttggtcacacataagtcctttaagtttgtaaacgtttttaatctagtccttctat 24059824  T
Q  357 ta 358  Q
    ||    
T  24059825 ta 24059826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 35225398 - 35225465
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  35225398 tcctttaagtttgaggtttgtaacaaattggtcctttaagttattttggtcatacataaatcctttaa 35225465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 21598783 - 21598710
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || || |||| |||||||| |||||    
T  21598783 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttgttctcacataagtcctttaagtttgt 21598710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 364046 - 364146
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||| ||||||||||||||||| |  |||||||| |||||||||||||||| | |||||| ||||||||| ||||| | ||| |||||||||    
T  364046 tcctttaagtttaaggtttgtaacagattgatt-tttaagttgttttggtcacaaataagttctttaagtttgtaaacattttcaacttaatcattctat 364144  T
Q  357 ta 358  Q
    ||    
T  364145 ta 364146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 10356539 - 10356450
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| | |||| |||| |||||||| ||||||||  ||||| |||||    
T  10356539 tcctttaagtttgagatttgtaacagattggtcttttaagttatttttgccacacataagtcctttaagtttgtaaaacttttcaattta 10356450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 10356261 - 10356333
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||| |||||||| ||||    
T  10356261 tcctttaagtttgaggtttgtaacaaattagtcctttaaattattttggtcacacataagtcctttaagtttg 10356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 10356599 - 10356527
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||| |||||||| ||||    
T  10356599 tcctttaagtttgacgtttgtaacagattggtcctttaggttattttggtaacacataagtcctttaagtttg 10356527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 21598445 - 21598517
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  || |||| |||||||| ||||    
T  21598445 tcctttaagtttgaggtttataacagattggtcctttaagttattttggttgcacataagtcctttaagtttg 21598517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 9983007 - 9982940
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||| ||||||||    
T  9983007 tcctttaagtttgaggattgtaacaaattgatcctttaagttattttggtcacacataagtcctttaa 9982940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 13812247 - 13812341
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||| ||||| ||| || || ||| |||||||| | ||| |||| || |||||||||||||| ||||||||||||||||||||    
T  13812247 tttaagtttgaggtttataacaaattagttctataaattattttgttaacacataagtcatttaaatttgtaaatgttttcgatttagtcattct 13812341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 2761679 - 2761582
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||| |||||  ||| ||| | ||||||| |||| ||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||| ||||    
T  2761679 tcctttaaatttgaaatttataataaattggtcttttaggttattttgatcacacataaatcctttaagtttgtaaacgttttcaatttagtccttct 2761582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 10356321 - 10356393
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||||||||||  ||| |||||||| ||||    
T  10356321 tcctttaagtttgatatttgtaacagattggttctttaagttattttggtcacacttaagtcctttaagtttg 10356393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 256 - 348
Target Start/End: Complemental strand, 13273343 - 13273252
Alignment:
Q  256 atcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagt 348  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||| |||||| |||| | |||||| ||||| ||| ||||| |||||||    
T  13273343 atcctttaagttttag-tttgtaacagattggtcatttaagttatttttgtcacacataagttctttaagtttgtgaactttttcaatttagt 13273252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 35050802 - 35050731
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||| | |||||| ||||    
T  35050802 cctttaagtttaaggtttgtaacagattggtcctttaagttatttcgatcacacataagttctttaagtttg 35050731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 9982947 - 9982851
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||   |||||||||| |||||||||||||||| |||| ||| || |||| |||||||| ||||||||| ||||| |||||||| ||||    
T  9982947 tcctttaagtttagagtttgtaacatattggtcctttaagttctttttgtctcacataagtcctttaagtttgtaaac-ttttcaatttagtccttct 9982851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 3848548 - 3848640
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||||||| | || |||| ||||||||| |||| | ||| ||||  ||||||| |||||||||| |||| ||||||||    
T  3848548 tcctttaagtttgaggtttgtaaaaaataggtcatttaagttagtttgcttacatataatacctttaagtttgtaaacggtttcaatttagtc 3848640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 17136844 - 17136916
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||| |||||||||||||| ||||| ||||||||||||||||||||| || |||| || ||||| ||||    
T  17136844 tcctttaaatttgaggtttgtaatagattagtcctttaagttattttggtctcacataagtcatttaagtttg 17136916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 291 - 354
Target Start/End: Original strand, 2761495 - 2761558
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| ||||| |||| |||||||| ||||||||||||||| |||||||| ||||    
T  2761495 tttaagttattttgatcacacataagtcctttaagtttgtaaacgttttcaatttagtccttct 2761558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 306
Target Start/End: Complemental strand, 17342776 - 17342729
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggt 306  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  17342776 ctttaagtttgaggtttgtaacatgttggtcctttaagttattttggt 17342729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 35050917 - 35050851
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||||||||||| | |||| ||||||||||||||| ||||||  |||| ||||||||    
T  35050917 cctttaagtttgaggtttgtaataaattgatcctttaagttatttaggtcacgcataagtcctttaa 35050851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 9982673 - 9982742
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||| |||  |||||||| |||||||| ||||| |||| |||||||| ||||    
T  9982673 tttaagtttgaggtttgtaacatattcatcctttaaattattttgatcacacataagtcctttaagtttg 9982742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 302
Target Start/End: Complemental strand, 35050858 - 35050813
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattt 302  Q
    |||||||||||| | |||||||||||||||||||||||||||||||    
T  35050858 tcctttaagtttaaagtttgtaacagattggtcctttaagttattt 35050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 13273399 - 13273335
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||| |||||||||| | ||||||| | ||||||| |||||| |||||||||||||    
T  13273399 tttaagtttgaggattgtaacagaatagtccttttaattatttttgtcacacataaatcctttaa 13273335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 310
Target Start/End: Complemental strand, 24059931 - 24059887
Alignment:
Q  266 tttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||    
T  24059931 tttgaagtttgtatcagattggtcctttaagttattttggtcaca 24059887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 35225684 - 35225594
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||| | ||||||| | |||| || ||| ||||||||| |||||| |||| |||| ||| ||||||||||| ||| ||||||||    
T  35225684 ctttaagtttgggatttgtaataaattgatcatttgagttatttttgtcacacataattcctataagtttgtaaacgtattcaatttagtc 35225594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 333
Target Start/End: Original strand, 12340787 - 12340868
Alignment:
Q  252 atggatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaa 333  Q
    |||| ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| ||||||||    
T  12340787 atgggtcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaaa 12340868  T

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Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 19557913 - 19557872
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttatt 301  Q
    |||||||||||||||| |||||||| ||||||||||||||||    
T  19557913 tttaagtttgaggtttataacagatcggtcctttaagttatt 19557872  T

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Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 19557961 - 19557904
Alignment:
Q  272 gtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| || ||||| ||||    
T  19557961 gtttgtaacagattggtcctttaaaatattttggtcacacataagtcttttaagtttg 19557904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 35050741 - 35050704
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaag 296  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  35050741 ctttaagtttgagatttgtaacagattggtcctttaag 35050704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 364274 - 364199
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaa 333  Q
    |||||||| |||||  ||||||| |||||| || |||||||||||||||||||| |||| || ||||| ||||||||    
T  364274 tcctttaaatttgatatttgtaatagattgatc-tttaagttattttggtcacacataagtcttttaagtttgtaaa 364199  T

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Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 13273068 - 13273140
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||| ||||||||| ||| | |||||||||||| | |||| | |||||| ||||    
T  13273068 tcctttaagtttgatgtttgtaatagattggtcttttgaattattttggtcatacataagttctttaagtttg 13273140  T

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Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 349
Target Start/End: Original strand, 13273130 - 13273217
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||| ||||||||||    ||| ||||||||||||| || |||| |  ||||| ||||||||| ||||| ||||||||    
T  13273130 ctttaagtttgaggtttataacagattg---attttagttattttggtcccacataagttatttaagtttgtaaacattttcaatttagtc 13273217  T

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Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 5238995 - 5238920
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||| ||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  5238995 tcctttaaatttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 5238920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 17342534 - 17342592
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||| ||||||| |||| |||||||| |||||||  |||||| ||||||||    
T  17342534 tttaagttatttcggtcacacataagtcctttaagtttgtaagtgttttcaatttagtc 17342592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 349
Target Start/End: Original strand, 31091261 - 31091318
Alignment:
Q  291 tttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| ||| | ||||||  ||||||||||||||||||||| ||||||||    
T  31091261 tttaagttattttgatcaaacataaatt-tttaaatttgtaaacgttttcaatttagtc 31091318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 12341298 - 12341257
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagtt 298  Q
    |||||||||||||| |||||||||| || |||||||||||||    
T  12341298 tcctttaagtttgacgtttgtaacaaataggtcctttaagtt 12341257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 24059667 - 24059737
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| |||| |  ||||||||| ||||| | || |||| |||||||| ||||    
T  24059667 tcctttaagtttgaggtttgtaacatattgat--tttaagttactttggccccacataagtcctttaagtttg 24059737  T

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Target: chr7 (Bit Score: 70; Significance: 3e-31; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 257 - 346
Target Start/End: Complemental strand, 6694807 - 6694718
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||    
T  6694807 tcctttaagtttgaggtttgtaacatattggtcctttaagttattttggtcacacataagtcctttaagtttataaacgttttcgattta 6694718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 44294046 - 44293954
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  44294046 tttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttcgatatagtcatt 44293954  T

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Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 4048264 - 4048357
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||| |||||||||||||| ||||||||||||||||||  |||||||| |||||||||| || ||||||||||||||| |||||||||||    
T  4048264 ctttaagtctgaggtttgtaacatattggtcctttaagttataatggtcacatataaatccttgaagtttgtaaacgttttcaatttagtcatt 4048357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 11975507 - 11975604
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |||| |||||||| ||| ||||||||||| |||||||| ||||    
T  11975507 tcctttaagtttgaggtttgtaacatattgatcctttaagttattgtggtcacacataagtcctttaagtttttaaacgttttcaatttagtccttct 11975604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 40951918 - 40951826
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||||||||||||||| |||||| || |||||||||||||||||||| ||||||| ||||| ||||||||| ||||| |||||||||||    
T  40951918 tttaagtttgaggtttgtaatagattgatcatttaagttattttggtcacacataaatcatttaagtttgtaaacattttctatttagtcatt 40951826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 11975718 - 11975616
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||| ||| ||||| ||||||||  ||||| |||||||| |||||    
T  11975718 tcctttaagtttgaggtttgtaactgattggtcctttaagttatttttgtcacacataagtccttttaagtttgtaaatattttcaatttagtccttcta 11975619  T
Q  356 tta 358  Q
    |||    
T  11975618 tta 11975616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 257 - 358
Target Start/End: Complemental strand, 41666421 - 41666320
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||| | ||||| |||| ||||| || || |||||| |||||||||||||| ||||||    
T  41666421 tcctttaagtttgaggtttgtaacagatttgtcccttaagttatttcgatcacacataagtccttaaagttggtaaacattttcgatttagtccttctat 41666322  T
Q  357 ta 358  Q
    ||    
T  41666321 ta 41666320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 349
Target Start/End: Complemental strand, 30869675 - 30869585
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||   ||| |||||||| ||||||||| ||||| ||||||||    
T  30869675 ctttaagtttgaggtttgtaacagattggtcctttaagttatttttatcacgcgtaagtcctttaagtttgtaaacattttcaatttagtc 30869585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 44293850 - 44293924
Alignment:
Q  275 tgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||    
T  44293850 tgtaacagattggttctttaagttattttggtcacaaataaatactttaagtttgtaaacattttctatttagtc 44293924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 27576668 - 27576596
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||    
T  27576668 tcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 27576596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 42312819 - 42312911
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||| ||||||| ||||||||| ||||  ||||||| |||||| |||| ||||||||||||||||| |||||| ||||||||    
T  42312819 tcctttaagtttgagatttgtaatagattggtcatttagtttatttttgtcacacataagtcctttaaatttgtaaaagttttcaatttagtc 42312911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 260 - 355
Target Start/End: Complemental strand, 4048487 - 4048392
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattcta 355  Q
    |||| |||| || |||||||||||||| || |||||||||||||||| ||| |||| |||||||| ||||||||| |||||||||||||| |||||    
T  4048487 tttaggtttaagatttgtaacagattgatcatttaagttattttggttacacataagtcctttaagtttgtaaacattttcgatttagtctttcta 4048392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 27576605 - 27576511
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||||||| |||| |||||||| |||||||| |||||| |||| ||| ||||    
T  27576605 tttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaattttgtccttct 27576511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 27280677 - 27280770
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattc 353  Q
    ||||||||||||||| |||| |||||  ||  ||||||||||||||| |||  ||| |||||||| ||||||||||||||||||||||||||||    
T  27280677 tttaagtttgaggttcgtaagagattaatcacttaagttattttggtaacacgtaagtcctttaagtttgtaaacgttttcgatttagtcattc 27280770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 354
Target Start/End: Original strand, 29019332 - 29019405
Alignment:
Q  281 agattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||| ||| |||||||||||||||||||| |||| |||||||| ||||||||||||||| |||||||||||||    
T  29019332 agatttgtcgtttaagttattttggtcacacataagtcctttaagtttgtaaacgttttcaatttagtcattct 29019405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 349
Target Start/End: Complemental strand, 29710594 - 29710505
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||| |||||||| |||||||||||||||||||||| |||||| |||| || ||||| ||||||||  ||||| ||||||||    
T  29710594 tttaagtttgagatttgtaacggattggtcctttaagttattttcgtcacacataagtcatttaagtttgtaaaacttttcaatttagtc 29710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 3198273 - 3198365
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcat 351  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||| || |||| | ||| || ||||||||| ||||| ||||| ||||    
T  3198273 ctttaagtttgaggtttgtaacaaattggtcttttaagttattttggtcccacataagttcttaaagtttgtaaacattttcaatttaatcat 3198365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 6694591 - 6694682
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||| ||||||||| |||||| |||||||||||||||| || ||| |||| |||||||| |||| |||||||||| ||||||||    
T  6694591 tcctttaagtttgtggtttgtaatagattgatcctttaagttatttt-gttacacataagtcctttaagtttgcaaacgttttcaatttagtc 6694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 29710320 - 29710392
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||| |||| |||||||| ||||    
T  29710320 tcctttaagtttgacgtttgtaacagattaatcctttaagttattttggtcacatataagtcctttaagtttg 29710392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 42312759 - 42312831
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||||||| |||| |||||||| ||||    
T  42312759 tcctttaagtttgaggtttgtaatatattggtcatttaagttattttggtcacacataagtcctttaagtttg 42312831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 40951694 - 40951787
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| |||| ||||||| || ||||||||||||||||| || |||| || ||||| |||||||||| ||||||||||||| ||||    
T  40951694 tttaagtttgaggtatgtaccagattg-tcatttaagttattttggtcgcacataagtcatttaagtttgtaaacgctttcgatttagtccttct 40951787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 11975778 - 11975706
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||| || ||| |||| |||||||| ||||    
T  11975778 tcctttaagtttgagatttgaaacagattggtcctttaagttatttttgtaacagataagtcctttaagtttg 11975706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 27280946 - 27280874
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||| |||| | |||||| ||||    
T  27280946 tcctttaagtttgaggtttgtaacagcttgaccctttaagttattttggtcacacataagtactttaagtttg 27280874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 30869737 - 30869665
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||| | |||||| ||||    
T  30869737 tcctttaagtttgaggtttgtaattgattggtcctttaagttattttggtcatacataagttctttaagtttg 30869665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 31453119 - 31453047
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||||| |||||| |||| |||||||| ||||    
T  31453119 tcctttaagtttgaggtttgtaacagattagttatttaagttatttttgtcacacataagtcctttaagtttg 31453047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 329
Target Start/End: Complemental strand, 42313132 - 42313056
Alignment:
Q  254 ggatcctttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||| |||||||||||  || |||||| ||||||||||||||||| |||| |||||||||||||    
T  42313132 ggatcctttaagtttgacgtttgtaacaggctgatccttttaagttattttggtcacacataagtcctttaaatttg 42313056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 29710380 - 29710433
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||    
T  29710380 tcctttaagtttgatatttgtaacatattggtcctttaagttattttggtcaca 29710433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 43258304 - 43258401
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||  |||| |||||||| |||||| || ||||||||||||| |||||| |||| |  ||||| ||||||||| |||||||||||||| ||||    
T  43258304 tcctttaaaattgaagtttgtaatagattgatcatttaagttatttttgtcacacataagtgttttaagtttgtaaacattttcgatttagtctttct 43258401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 29710657 - 29710585
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||||| ||| |||| || ||||| ||||    
T  29710657 tcctttaagtttgacgtttgtaacagattggtcttttaggttattttggtaacacataagtcatttaagtttg 29710585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 6694533 - 6694604
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||| || || |||| |||||||| |||||    
T  6694533 ctttaagtttgaggtttgtaataaattggtcttttaagttattttgttcccacataagtcctttaagtttgt 6694604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 255 - 333
Target Start/End: Complemental strand, 6069340 - 6069262
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaa 333  Q
    ||||||||||||||||||||||||||| ||  ||| |||||||||||||| ||| | |||| | |||||| ||||||||    
T  6069340 gatcctttaagtttgaggtttgtaacatatatgtcatttaagttattttgatcaaacataagttctttaagtttgtaaa 6069262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 22750379 - 22750477
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||| |||||||||||||| | |||| || ||||| ||||||| |||| | ||||||| ||||| ||||| ||||||||| |||||| |||| |||||    
T  22750379 tttaattttgaggtttgtaatatattgatcatttaaattatttttgtcatacataaatcttttaagtttgtgaacgttttcaatttagccattttatta 22750477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 44294109 - 44294051
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  44294109 tcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataa 44294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 41666204 - 41666293
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    ||||||||||||||||||||||||| |||| |  ||| || ||||||||| ||| |||| |  ||||| ||||||||||||| |||||||    
T  41666204 tcctttaagtttgaggtttgtaacatattgatttttttagctattttggttacacataagtagtttaagtttgtaaacgtttacgattta 41666293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 27280614 - 27280686
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||| | |||| |||| || ||||| ||||    
T  27280614 tcctttaagtttgaagtttgttacaaattggtcctttaagttattttagccacacataagtcatttaagtttg 27280686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 30869409 - 30869481
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||||||  ||||||||| | ||||||||||||| ||| | || |||||||| ||||    
T  30869409 tcctttaagtttgaggtttgtaatcgattggtccctaaagttattttggttacacacaagtcctttaagtttg 30869481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 26186036 - 26185970
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||| |||||||  | |||||||||| |||||||||||||| |||| ||||||||    
T  26186036 tcctttaagtttgaggtgtgtaacat-tgggtcctttaaattattttggtcacacataagtcctttaa 26185970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 6222080 - 6222138
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||||||| |||||||||| | ||||||| ||||||||||||| |||||| ||||    
T  6222080 tcctttaagtttaaggtttgtaatatattggtcttttaagttattttagtcacacataa 6222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 321
Target Start/End: Complemental strand, 27280884 - 27280822
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctt 321  Q
    ||||||||||||||||  ||||| |||| ||||||||||||||||||| ||| |||| |||||    
T  27280884 ctttaagtttgaggttcataacaaattgatcctttaagttattttggtaacacataagtcctt 27280822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 42313068 - 42313010
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||| |||||  ||||||||| ||||||||||||| |||||||||||||| ||||    
T  42313068 tcctttaaatttgatatttgtaacaaattggtcctttaaattattttggtcacacataa 42313010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 40081191 - 40081256
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||||||||||| ||| |||||| |||||| || |||||||||||||||| ||| |||||| ||||    
T  40081191 tcctttaagtttaagggttgtaatagattgatcatttaagttattttggttacacataaattcttt 40081256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 4048205 - 4048269
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||||||||| ||| |  | ||||||||||||||||||||| |||| | ||||||    
T  4048205 tttaagtttgaggtttgtaatagactaattctttaagttattttggtcacacataagttctttaa 4048269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 40951634 - 40951690
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||||| ||||||  |||||| || |||||||||||||| ||||||||||    
T  40951634 ctttaagtttgagatttgtagtagattgatcatttaagttattttgctcacaaataa 40951690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 43258522 - 43258435
Alignment:
Q  266 tttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||| ||||||| |||||| |  ||||| |||||||| ||||| |||| |||||||| ||| ||||||||||  |||||||||||||    
T  43258522 tttgagatttgtaatagattgatt-tttaaattattttgatcacacataagtcctttaagtttttaaacgtttttaatttagtcattct 43258435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 46713272 - 46713352
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    |||||||||||| |||||||| | ||| ||| ||||| |||||||  | ||| |||| ||||||||||||| |||||||||    
T  46713272 ctttaagtttgaagtttgtaataaattagtcatttaaattattttaataacacataagtcctttaaatttgcaaacgtttt 46713352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 41666145 - 41666216
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||| ||||| |||| || ||||||||||||| || | | |||| |||||||| ||||    
T  41666145 cctttaagtttgaggtttataacaaattgatcatttaagttatttttgttatatataagtcctttaagtttg 41666216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 329
Target Start/End: Original strand, 30662153 - 30662227
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||| ||| | ||| |||||||||| ||| |||||||||||||| | ||| |||| |||||||| ||||    
T  30662153 gatcctttaaatttaaagttcgtaacagattagtcttttaagttattttgattacacataagtcctttaagtttg 30662227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 303
Target Start/End: Original strand, 48130042 - 48130088
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttatttt 303  Q
    ||||||||||||  ||||||||||| ||||||||||| |||||||||    
T  48130042 tcctttaagttttcggtttgtaacacattggtccttttagttatttt 48130088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 3198219 - 3198256
Alignment:
Q  263 aagtttgaggtttgtaacagattggtcctttaagttat 300  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  3198219 aagtttgaagtttgtaacagattgatcctttaagttat 3198256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 3198512 - 3198459
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    ||||||||||||||||| | ||| | ||||||  ||||||||||||||||||||    
T  3198512 tcctttaagtttgaggtctataataaattggttatttaagttattttggtcaca 3198459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 6068714 - 6068807
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||| |||||||||||||| | ||  ||||||||| |||||||  ||| | |||||| || ||| ||| |||||| |||| |||||||||||    
T  6068714 ctttaaatttgaggtttgtaataaatatgtcctttaaattattttaatcatacataaattctataagtttataaacgatttcaatttagtcatt 6068807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 46713213 - 46713262
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtca 308  Q
    |||||| |||||||||||||| ||||| ||  ||||||||||||||||||    
T  46713213 ctttaaatttgaggtttgtaatagattagttatttaagttattttggtca 46713262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 315
Target Start/End: Original strand, 6222141 - 6222197
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||||| |  ||||||||||||| ||  |||||||||||||||||||| ||||    
T  6222141 ctttaagtttaaaatttgtaacagattagttatttaagttattttggtcacacataa 6222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 288
Target Start/End: Original strand, 29019255 - 29019283
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggt 288  Q
    |||||||||||||||||||||||||||||    
T  29019255 tttaagtttgaggtttgtaacagattggt 29019283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 44293778 - 44293843
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||| ||||||||||| ||| |    ||||||||||||||||||| |||| | ||||||    
T  44293778 gatcctttaagtttgtggtttgtaacaaattag----ttaagttattttggtcacacataagttctttaa 44293843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 20209534 - 20209442
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  20209534 tttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttcgatatagtcatt 20209442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 20229242 - 20229150
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||||||||| |||||||| ||||||||    
T  20229242 tttacgtttgaggtttgtaacagattgatcctttaagttattttggtcacaaataagtactttaagtttgtaaacattttcgatatagtcatt 20229150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 24827417 - 24827514
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||| |||||||| ||||| ||| ||||||||||||| |||||| |||| || |||||||||||||||||||||||||||||| ||||    
T  24827417 tcctttaagtttgatgtttgtaatagatttgtcatttaagttattttagtcacacataagtcttttaaatttgtaaacgttttcgatttagtccttct 24827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 354
Target Start/End: Original strand, 41151465 - 41151562
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||| |||||| |||||||| ||||    
T  41151465 tcctttaagtttgagtttagtaacagattggtcctttaagttattttggtcacacataagtcctttatgtttgtaaatgttttcaatttagtccttct 41151562  T

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Target: chr8; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 41151680 - 41151586
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||| |||  |||||||||||||    
T  41151680 tttaagttcgtggtttgtaacagattggtcctttaagttcttttggtcacacataagtcctttaagtttgtaaacggtttgaatttagtcattct 41151586  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 6220458 - 6220364
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||||| |||| |||||||| ||| ||||||||||| |||||||| ||||    
T  6220458 ctttaagtttgagatttgtaacagattggtactttaagttattgtggtcacacataagtcctttaagttt-taaacgttttcaatttagtccttct 6220364  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 27052671 - 27052583
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    ||||| ||||||||| ||||||||||||||    
T  27052671 tcctttaagtttgaggtttataacagattggtcctttaagttattttgatcacacataa----tttaagtttgtaaactttttcgatttagtc 27052583  T

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Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 20209338 - 20209412
Alignment:
Q  275 tgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||    
T  20209338 tgtaacagattggttctttaagttattttggtcacaaataaatactttaagtttgtaaacattttctatttagtc 20209412  T

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Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 20229046 - 20229120
Alignment:
Q  275 tgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||    
T  20229046 tgtaacagattggttctttaagttattttggtcacaaataaatactttaagtttgtaaacattttctatttagtc 20229120  T

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Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 27127938 - 27128031
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||| |||| |||||||| |||||||| |||||| |||||||| ||||    
T  27127938 tttaagtttgag-tttgtaacagattgattctttaagttattttggtcacacataagtcctttaagtttgtaaatgttttcaatttagtccttct 27128031  T

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Target: chr8; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 24909681 - 24909605
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaa 333  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||| |||||||| ||||||||    
T  24909681 tcctttaagtttgaggtttgtagcagattggtcctttaaattattttggtcacgcataagtcctttaagtttgtaaa 24909605  T

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Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 9400102 - 9400007
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcc-tttaaatttgtaaacgttttcgatttagtcattc 353  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||||||||| |||| ||| ||||| ||||||||| ||||| ||||||||||||    
T  9400102 ctttgagtttgaggtttgtagcatgttggtcctttaagttattttggtcacacataagtccttttaagtttgtaaaccttttcaatttagtcattc 9400007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 27855620 - 27855714
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||| |||||||||| ||||||||||| ||||||| ||||||| ||| ||||||| ||||| ||| |||| ||||||||||||||| ||||    
T  27855620 tttaagttcgaggtttgtagcagattggtcccttaagttgttttggttacatataaatcatttaagtttttaaatgttttcgatttagtccttct 27855714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 322
Target Start/End: Complemental strand, 41151741 - 41151679
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||    
T  41151741 tttaagtttgaggtttgtaacagattagtcctttaagttattttggtcacacataagtccttt 41151679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 6220243 - 6220344
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||| |||||| |||| || ||| || ||||||| |||||| |||||||  ||||||    
T  6220243 tcctttaagtttgaggtttgtaactgattggtcatttaagtaatttttgtcacacataagtctttttaagttgtaaatgttttcaatttagtacttctat 6220342  T
Q  357 ta 358  Q
    ||    
T  6220343 ta 6220344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 24827357 - 24827429
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||| |||||||| ||||    
T  24827357 tcctttaagtttgaggtttgtaacagattggtcatttaagttatattgatcacaactaagtcctttaagtttg 24827429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 24909741 - 24909669
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||||| ||||    
T  24909741 tcctttaagtttgagatttgtaacaaattggtcctttaagttattttgatcacacataagtcctttaagtttg 24909669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 41151405 - 41151477
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| ||||| |||| |||||||| ||||    
T  41151405 tcctttaagtttgagttttgtaacatattggtcctttaagttattttgatcacacataagtcctttaagtttg 41151477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 36053121 - 36053027
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||| |||||||||||||| | |||| |||||||||||||||| |||||| |||| | |||||| |||||||| |||||| || ||||||||||    
T  36053121 tttaaatttgaggtttgtaaaatattgatcctttaagttattttagtcacacataagttctttaagtttgtaaaagttttcaatctagtcattct 36053027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 14895218 - 14895126
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||||| ||||||| | ||||||| | |||||||| ||||  ||| ||||||||||||| ||||||||||||||| |||||||||||    
T  14895218 ctttaagtttgagttttgtaataaattggtc-tctaagttatattggctacatataaatcctttaagtttgtaaacgttttcaatttagtcatt 14895126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 27052471 - 27052540
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||| |||||||||||| |||||||||||||||||||| ||||||| |||| |||||||| ||||    
T  27052471 tttaagtttaaggtttgtaacacattggtcctttaagttatttcggtcacacataagtcctttaagtttg 27052540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 346
Target Start/End: Complemental strand, 28618886 - 28618825
Alignment:
Q  285 tggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  28618886 tggtcctttaagttattttggtcacaaataaattttttaagtttgtaaacgttttcaattta 28618825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 38414956 - 38415025
Alignment:
Q  290 ctttaagttattttggtcacaaataaa-tcctttaaatttgtaaacgttttcgatttagtcattctatta 358  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||| |||||||||    
T  38414956 ctttaagttattttggtcacatataaaatcctttaaatttgtaaatgttttcaatttagttattctatta 38415025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 6220183 - 6220255
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| || ||| |||| |||||||| ||||    
T  6220183 tcctttaagtttgaggtttgaaacaaattggtcctttaagttatttttgtaacagataagtcctttaagtttg 6220255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 6220520 - 6220448
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||| | |||||| ||||    
T  6220520 tcctttaagtttgaggtttgtaacaaattggttctttaagttatttttgtcacacataagttctttaagtttg 6220448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 9399816 - 9399883
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||  ||| ||||||||    
T  9399816 tcctttaagtttgaggtttgtaacatattggttctttaagttactttggtcacacgtaagtcctttaa 9399883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 9400166 - 9400099
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatccttt 322  Q
    |||| |||||||||||||||||||||| |||| || |||||||||||||||||||| |||||| ||||    
T  9400166 gatcttttaagtttgaggtttgtaacatattgatcgtttaagttattttggtcacacataaattcttt 9400099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 354
Target Start/End: Complemental strand, 14895069 - 14895012
Alignment:
Q  297 ttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||| |||| ||||||| ||||||||||||||||||||| |||||||||||||    
T  14895069 ttattttggccacacataaatcttttaaatttgtaaacgttttcaatttagtcattct 14895012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 27855559 - 27855624
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||  |||| ||||||| |||||    
T  27855559 ctttaagtttaaggtttgtaatagattggtcctttaagttattttgaacacacataaatcatttaa 27855624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 337
Target Start/End: Complemental strand, 29428021 - 29427952
Alignment:
Q  268 tgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtt 337  Q
    |||||||| ||||||||||||| |||||||||||||||||| | |||| |||||||| |||||| |||||    
T  29428021 tgaggtttctaacagattggtcttttaagttattttggtcatacataagtcctttaagtttgtacacgtt 29427952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 20057089 - 20057014
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||||| ||||||||||||| |||||||||||||  ||| || ||| |||| |||||||| |||||||    
T  20057089 tcctttaagtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataagtcctttaactttgtaa 20057014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 257 - 324
Target Start/End: Original strand, 27052408 - 27052475
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    |||||||||||||| |||||||| |||||||||| |||||||||||| |||||| |||| || |||||    
T  27052408 tcctttaagtttgatgtttgtaatagattggtcccttaagttattttagtcacatataagtcatttaa 27052475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 20209597 - 20209539
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  20209597 tcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataa 20209539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 315
Target Start/End: Complemental strand, 20229305 - 20229247
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||| |||||||||||||||| ||| ||||||||| |||||||||||||| ||||    
T  20229305 tcctttaaatttgaggtttgtaacatattagtcctttaaattattttggtcacacataa 20229247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 27052729 - 27052659
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||| |||||| | |||||||||||||| ||| || |||| |||||||| ||||    
T  27052729 ctttaagtttgaggtttgtaatagattgattctttaagttatttttgtcgcacataagtcctttaagtttg 27052659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 257 - 354
Target Start/End: Complemental strand, 27128153 - 27128055
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtccttt-aagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||| |||||| ||||| |||| || ||| ||||||||||||||||| |||| |  ||| | | ||||||||||||| |||||||||||||    
T  27128153 tcctttaagtttaaggtttctaacaaattgatctttttaagttattttggtcacacataagttttttcagtctgtaaacgttttcaatttagtcattct 27128055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 24793023 - 24793116
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    ||||||||||| ||||| ||| |||| | |||||||| |||||||||| ||| |||| | |||||||||||||||  ||||| ||||| |||||    
T  24793023 ctttaagtttgcggtttataatagatagatcctttaaattattttggttacacataagtactttaaatttgtaaaaattttcaatttaatcatt 24793116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 9399876 - 9399970
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcatt 352  Q
    |||||||||||| |||||||||| ||| ||   ||||||||||||||||||||| || || | |||||  |||||||| ||||| |||||||||||    
T  9399876 tcctttaagtttaaggtttgtaatagagtgactctttaagttattttggtcacacat-aagcttttaagattgtaaacattttcaatttagtcatt 9399970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 15564116 - 15564022
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||| ||||| |||||||| |||||| || | ||||||||||| || ||| |||| |||||||||||||| ||||||||  ||||||| |||||    
T  15564116 ctttaaatttgaagtttgtaatagattgatcttctaagttatttttgttacacataagtcctttaaatttgt-aacgtttttaatttagttattct 15564022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 42667446 - 42667521
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    |||||||||||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  42667446 tcctttaagtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagatatgtcctttaactttgtaa 42667521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 14549958 - 14550016
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||| |||||||||||||||||| | |||||| ||||| ||||||||||||||| ||||    
T  14549958 tcctctaagtttgaggtttgtaatatattggttctttatgttattttggtcacacataa 14550016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 24083305 - 24083223
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttag 347  Q
    ||||||||||||||||||||||||||| |  |||||||||||||| ||||    | ||||||||| ||||||||| ||||| ||||||    
T  24083305 tttaagtttgaggtttgtaacagattgat-ttttaagttattttgatcac----atatcctttaagtttgtaaacattttcaatttag 24083223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 315
Target Start/End: Original strand, 27127878 - 27127935
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||||| ||||| ||||    
T  27127878 tcctttaagtttgag-tttgtaacagattggttatttaagttattttgatcacacataa 27127935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 336
Target Start/End: Original strand, 15563907 - 15563983
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgt 336  Q
    ||||||||||||| |||||||| |||  | ||| ||||||||||||||| | |||| |||||||| ||| |||||||    
T  15563907 tttaagtttgagggttgtaacatattaatacttaaagttattttggtcatacataagtcctttaagtttctaaacgt 15563983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 16913001 - 16913073
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||| ||||||| ||||||| | | ||||| |||||||||||||| ||||| |||||| |||||| ||||    
T  16913001 tcctttatgtttgagatttgtaataaaatggtcttttaagttattttgatcacatataaattctttaagtttg 16913073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 335
Target Start/End: Original strand, 9089971 - 9090046
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacg 335  Q
    |||||||||||||||||| | || | |||||||||| ||||||| | |||| |||||| |||||| ||| ||||||    
T  9089971 tttaagtttgaggtttgtgataggtaggtcctttaaattatttttgccacacataaattctttaagtttataaacg 9090046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 16913063 - 16913114
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcaca 310  Q
    |||||||||||||||| |||||||||||||| |  ||||||||||| |||||    
T  16913063 ctttaagtttgaggttcgtaacagattggtcataaaagttattttgatcaca 16913114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 20056570 - 20056645
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  20056570 tcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 20056645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 324
Target Start/End: Complemental strand, 27128212 - 27128146
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||||||| ||||| | || ||||||||    
T  27128212 tcctttaagtttgaggtttgtaatagattggt-ttttaggttattttgatcacacacaagtcctttaa 27128146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Complemental strand, 45215981 - 45215906
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  45215981 tcctttatgtttgacgtttgtaacagatgggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 45215906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 14550070 - 14550147
Alignment:
Q  266 tttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||||| |||| || || |||||   ||||| ||| |||| |||||||| ||||||||||||||| |||||    
T  14550070 tttgaggtttgtaacatattgatctttgaagtt---ttggttacacataagtcctttaagtttgtaaacgttttcaattta 14550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 14550285 - 14550204
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagtta--ttttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    ||||||||||||||||||||  |||| || |||||| |||  ||||||||||| |||| || ||||| ||||||||| ||||    
T  14550285 tttaagtttgaggtttgtaatggattagttctttaaattattttttggtcacacataagtcatttaagtttgtaaacatttt 14550204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 302
Target Start/End: Original strand, 16915224 - 16915266
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattt 302  Q
    |||||||||||| |||||||||||||| || ||||||||||||    
T  16915224 tttaagtttgagatttgtaacagattgatcatttaagttattt 16915266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 36052895 - 36052977
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgtttt 339  Q
    |||||||||||||| ||||  ||||||||| || |||| |||||||||||||||  ||| |  ||||| ||||||||| ||||    
T  36052895 tcctttaagtttgaagtttacaacagattgatcatttatgttattttggtcacacgtaagttgtttaagtttgtaaacatttt 36052977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 298
Target Start/End: Complemental strand, 42667965 - 42667924
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagtt 298  Q
    ||||||| |||||| ||||||||||||| |||||||||||||    
T  42667965 tcctttatgtttgacgtttgtaacagataggtcctttaagtt 42667924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 20209266 - 20209331
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||| ||||||||||| ||| |    ||||||||||||||||||| |||| | ||||||    
T  20209266 gatcctttaagtttgtggtttgtaacaaattag----ttaagttattttggtcacacataagttctttaa 20209331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 324
Target Start/End: Original strand, 20228974 - 20229039
Alignment:
Q  255 gatcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaa 324  Q
    ||||||||||||||| ||||||||||| ||| |    ||||||||||||||||||| |||| | ||||||    
T  20228974 gatcctttaagtttgtggtttgtaacaaattag----ttaagttattttggtcacacataagttctttaa 20229039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 304
Target Start/End: Original strand, 24083122 - 24083166
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttg 304  Q
    ||||||| |||||||| ||||||||||||| |||| |||||||||    
T  24083122 tttaagtatgaggtttttaacagattggtcatttacgttattttg 24083166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 63; Significance: 4e-27; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 161682 - 161580
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||| |||||  |||||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||||| |||||| ||||||||||||| |    
T  161682 tcctttaaatttgatatttgtaacagattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaatttagtcattctgt 161583  T
Q  357 tag 359  Q
    |||    
T  161582 tag 161580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 161404 - 161476
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||||    
T  161404 tcctttaagtttgaggtttgtaacagattggtcctttaacttattttggtcacacataagtcctttaagtttg 161476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 161742 - 161670
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||| |||||||||||||    
T  161742 tcctttaagtttgatgtttgtaatagattgatcctttaagttattttggtcacacataagtcctttaaatttg 161670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 257 - 331
Target Start/End: Original strand, 161464 - 161538
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgta 331  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||| |||||||| ||||||    
T  161464 tcctttaagtttgagatttgtaacagattggtcctttaacttatttttgtcacacataagtcctttaagtttgta 161538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 21580 - 21681
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    ||||||||||||||| ||||||||||| |  |||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||||||| ||||||    
T  21580 tcctttaagtttgagatttgtaacagactaatcctttaaattatttcggtcacacataagtcttttaaatttgtaaacgttttcgatttagtccttctat 21679  T
Q  357 ta 358  Q
    ||    
T  21680 ta 21681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 21794 - 21700
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    ||||||||| ||||||| || | |||| || |||||||||||||||||||| ||||||||||||| ||||||||   |||| |||||||| ||||    
T  21794 tttaagtttaaggtttgcaatatattgatcttttaagttattttggtcacacataaatcctttaagtttgtaaaaaatttcaatttagtccttct 21700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 21520 - 21592
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| |||||| || |||||||||||||  ||||| |||| |||||||| ||||    
T  21520 tcctttaagtttgaggtttgtaatagattgatcatttaagttattttaatcacacataagtcctttaagtttg 21592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 324
Target Start/End: Complemental strand, 21854 - 21790
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatcctttaa 324  Q
    |||| |||||||||||||| |||||||||| ||||||||||||| |||||| |||| || |||||    
T  21854 ttaaatttgaggtttgtaatagattggtccttttaagttatttttgtcacacataagtcttttaa 21790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 1272 - 1200
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||| ||||    
T  1272 tcctttaagtttgacgtttgtaacagattggtcctttaagttattttggtcacacataagtcatttaagtttg 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 1209 - 1115
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||  |||||||| ||||||||||||| ||||||||||||||| |||| |||||||| |||||||| |||||| |||| ||| ||||    
T  1209 tttaagtttgatatttgtaactgattggtcctttaggttattttggtcacacataagtcctttaagtttgtaaaagttttcaattttgtccttct 1115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 6e-20; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 12318 - 12228
Alignment:
Q  261 ttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattct 354  Q
    |||||||||||||||||||||||||||| |||||| |||||||| ||||  ||||||| |||||||||||||| |||||| |||||||| ||||    
T  12318 ttaagtttgaggtttgtaacagattggt-ctttaacttattttgatcac--ataaatcttttaaatttgtaaatgttttcaatttagtccttct 12228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 12110 - 12200
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtc 349  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||| |||||| | || |||||||| ||||||||| ||||||||| ||||    
T  12110 cctttaagtttgagatttgtaacaaattggtcctt-aagttatttttgtcacacacaagtcctttaagtttgtaaacattttcgattgagtc 12200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 12051 - 12121
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttg 329  Q
    ||||||||||||||||||||||| | ||||||  || ||||||||||||||||| ||| | ||||||| ||||    
T  12051 tcctttaagtttgaggtttgtaataaattggt--ttcaagttattttggtcacacatataccctttaagtttg 12121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 260 - 315
Target Start/End: Complemental strand, 12377 - 12324
Alignment:
Q  260 tttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataa 315  Q
    |||||||||||||||||||| |||||| |  |||||||||||||| ||||| ||||    
T  12377 tttaagtttgaggtttgtaatagattgat--tttaagttattttgatcacatataa 12324  T

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Target: scaffold0578 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 330
Target Start/End: Complemental strand, 2517 - 2445
Alignment:
Q  259 ctttaagtttgaggtttgtaacagattggtcc-tttaagttattttggtcacaaataaatcctttaaatttgt 330  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||| || ||||| |||||    
T  2517 ctttaagtttgaggtttgtaatagattggtccttttaagttattttgttcacacataagtcatttaagtttgt 2445  T

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Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 257 - 358
Target Start/End: Original strand, 2441 - 2542
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgatttagtcattctat 356  Q
    |||||||||||||| ||||  || ||||| | | ||||| ||||||| |||||| |||| | |||||| ||||||||||||| | || ||||| ||||||    
T  2441 tcctttaagtttgaagtttacaaaagattagacatttaatttattttagtcacacataagttctttaagtttgtaaacgtttcctatctagtccttctat 2540  T
Q  357 ta 358  Q
    ||    
T  2541 ta 2542  T

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Target: scaffold0128; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 2667 - 2580
Alignment:
Q  258 cctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaaacgttttcgattta 346  Q
    |||||||||||||||||| ||||||||| ||  ||||||||| |||  | ||| |||| | |||||| ||||||||||||||| |||||    
T  2667 cctttaagtttgaggtttataacagatt-gttatttaagttacttttataacacataagttctttaagtttgtaaacgttttcaattta 2580  T

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Target: scaffold0246 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 332
Target Start/End: Original strand, 25846 - 25921
Alignment:
Q  257 tcctttaagtttgaggtttgtaacagattggtcctttaagttattttggtcacaaataaatcctttaaatttgtaa 332  Q
    ||||||| |||||| ||||||||||||| |||||||||||||  ||| || ||| |||  |||||||| |||||||    
T  25846 tcctttatgtttgacgtttgtaacagataggtcctttaagtttgttttgtaacagataggtcctttaactttgtaa 25921  T

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