View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19105_high_16 (Length: 310)

Name: NF19105_high_16
Description: NF19105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19105_high_16
NF19105_high_16
[»] chr7 (65 HSPs)
chr7 (102-306)||(36220749-36220961)
chr7 (17-95)||(10098178-10098256)
chr7 (17-95)||(42508088-42508166)
chr7 (17-95)||(15074289-15074367)
chr7 (17-97)||(18105305-18105385)
chr7 (17-96)||(46907473-46907552)
chr7 (17-100)||(48403301-48403384)
chr7 (17-95)||(35610476-35610554)
chr7 (202-306)||(36226614-36226721)
chr7 (17-97)||(12210650-12210730)
chr7 (17-96)||(7975670-7975749)
chr7 (21-95)||(41880448-41880522)
chr7 (26-91)||(40141296-40141361)
chr7 (39-95)||(618808-618864)
chr7 (19-99)||(49141680-49141760)
chr7 (30-97)||(603711-603778)
chr7 (20-95)||(17465777-17465852)
chr7 (20-95)||(17587362-17587437)
chr7 (20-95)||(18109838-18109913)
chr7 (17-96)||(42582049-42582128)
chr7 (17-95)||(45763313-45763392)
chr7 (21-95)||(7004-7078)
chr7 (17-90)||(30786485-30786559)
chr7 (202-295)||(35978178-35978274)
chr7 (202-295)||(35999590-35999686)
chr7 (17-90)||(43032912-43032986)
chr7 (20-97)||(10524420-10524497)
chr7 (30-95)||(20564007-20564072)
chr7 (18-95)||(27656973-27657050)
chr7 (200-240)||(36210862-36210902)
chr7 (30-97)||(10097848-10097915)
chr7 (17-96)||(13921324-13921403)
chr7 (50-97)||(20566453-20566500)
chr7 (21-95)||(8111-8185)
chr7 (30-96)||(41884200-41884266)
chr7 (50-96)||(46908566-46908612)
chr7 (50-95)||(10098267-10098312)
chr7 (19-95)||(45258066-45258142)
chr7 (17-95)||(9371448-9371527)
chr7 (50-97)||(16636336-16636383)
chr7 (50-97)||(17459255-17459302)
chr7 (50-97)||(17593912-17593959)
chr7 (17-68)||(17834449-17834500)
chr7 (50-97)||(48407415-48407462)
chr7 (17-95)||(10168319-10168397)
chr7 (17-95)||(10175844-10175922)
chr7 (18-68)||(30471601-30471651)
chr7 (202-295)||(35958723-35958819)
chr7 (203-257)||(35974085-35974139)
chr7 (203-257)||(35995497-35995551)
chr7 (209-306)||(36216868-36216968)
chr7 (45-95)||(42795168-42795218)
chr7 (17-86)||(43624206-43624276)
chr7 (50-91)||(9365584-9365625)
chr7 (30-95)||(28564608-28564673)
chr7 (50-91)||(30791102-30791143)
chr7 (30-95)||(35606723-35606788)
chr7 (50-91)||(43619643-43619684)
chr7 (1-33)||(30791034-30791066)
chr7 (202-285)||(35930982-35931068)
chr7 (201-253)||(35982791-35982843)
chr7 (201-253)||(36004203-36004255)
chr7 (17-89)||(40928988-40929060)
chr7 (1-33)||(43032989-43033021)
chr7 (50-98)||(45767955-45768002)
[»] chr8 (50 HSPs)
chr8 (17-95)||(184613-184691)
chr8 (17-95)||(36677990-36678068)
chr8 (17-95)||(22014496-22014574)
chr8 (17-96)||(15030817-15030896)
chr8 (17-96)||(45066422-45066501)
chr8 (17-96)||(1052491-1052570)
chr8 (18-94)||(15036764-15036840)
chr8 (20-95)||(489690-489765)
chr8 (17-92)||(26659391-26659466)
chr8 (17-96)||(25595-25674)
chr8 (17-96)||(28618496-28618575)
chr8 (17-91)||(22510486-22510560)
chr8 (17-95)||(28617503-28617581)
chr8 (30-95)||(22014180-22014245)
chr8 (50-95)||(42485632-42485677)
chr8 (20-95)||(23022351-23022426)
chr8 (17-90)||(30305604-30305678)
chr8 (17-90)||(32378982-32379056)
chr8 (17-90)||(32432937-32433011)
chr8 (17-95)||(32585050-32585128)
chr8 (30-95)||(184309-184374)
chr8 (18-95)||(914655-914732)
chr8 (17-86)||(5532405-5532474)
chr8 (30-95)||(23018619-23018684)
chr8 (30-95)||(36677646-36677711)
chr8 (17-97)||(2416135-2416215)
chr8 (17-89)||(43211472-43211544)
chr8 (21-95)||(2335212-2335286)
chr8 (17-90)||(7340005-7340079)
chr8 (17-95)||(22550925-22551003)
chr8 (45-95)||(27501535-27501585)
chr8 (17-95)||(44933794-44933872)
chr8 (30-95)||(21720-21785)
chr8 (30-95)||(22519669-22519734)
chr8 (20-97)||(27502628-27502705)
chr8 (31-95)||(915709-915773)
chr8 (45-101)||(5533113-5533169)
chr8 (50-97)||(26663127-26663174)
chr8 (50-97)||(32375583-32375630)
chr8 (17-96)||(39831090-39831169)
chr8 (17-68)||(45409833-45409884)
chr8 (17-86)||(8423850-8423920)
chr8 (45-95)||(31185533-31185583)
chr8 (45-95)||(43363348-43363398)
chr8 (30-91)||(483721-483782)
chr8 (30-95)||(1056275-1056340)
chr8 (50-91)||(7344651-7344692)
chr8 (50-90)||(17924040-17924080)
chr8 (1-33)||(30305569-30305601)
chr8 (20-96)||(32583986-32584062)
[»] chr4 (50 HSPs)
chr4 (17-95)||(52529147-52529225)
chr4 (17-95)||(54634076-54634154)
chr4 (20-96)||(37563344-37563420)
chr4 (17-98)||(30726802-30726883)
chr4 (17-96)||(26932517-26932596)
chr4 (17-71)||(39773362-39773416)
chr4 (17-95)||(40352300-40352378)
chr4 (17-95)||(49090381-49090459)
chr4 (17-96)||(55588344-55588423)
chr4 (17-95)||(6181852-6181930)
chr4 (17-95)||(21022948-21023026)
chr4 (26-96)||(30723054-30723124)
chr4 (17-95)||(31421640-31421718)
chr4 (30-95)||(1089658-1089723)
chr4 (17-98)||(55587290-55587371)
chr4 (19-91)||(9893327-9893399)
chr4 (17-95)||(13173168-13173246)
chr4 (20-98)||(13182162-13182240)
chr4 (17-95)||(14201587-14201665)
chr4 (17-95)||(26792305-26792383)
chr4 (30-95)||(1087794-1087859)
chr4 (17-94)||(1309175-1309252)
chr4 (50-97)||(41801031-41801078)
chr4 (30-97)||(54633744-54633811)
chr4 (17-95)||(3408301-3408379)
chr4 (17-95)||(23221727-23221805)
chr4 (17-95)||(31242150-31242228)
chr4 (17-95)||(46253421-46253499)
chr4 (20-97)||(7485724-7485801)
chr4 (30-95)||(37562999-37563064)
chr4 (18-95)||(40832581-40832658)
chr4 (30-95)||(49096425-49096490)
chr4 (30-95)||(49169171-49169236)
chr4 (17-101)||(7484659-7484743)
chr4 (17-100)||(49566510-49566594)
chr4 (50-97)||(39773635-39773682)
chr4 (50-101)||(41793259-41793310)
chr4 (17-95)||(23220613-23220691)
chr4 (17-95)||(51037528-51037606)
chr4 (30-95)||(31425392-31425457)
chr4 (31-96)||(40358355-40358420)
chr4 (50-96)||(6175780-6175826)
chr4 (17-95)||(38368166-38368244)
chr4 (17-95)||(38369242-38369320)
chr4 (17-95)||(53535927-53536005)
chr4 (50-95)||(55799654-55799699)
chr4 (17-65)||(16473740-16473788)
chr4 (20-96)||(26933329-26933405)
chr4 (36-95)||(49164997-49165054)
chr4 (1-33)||(49566475-49566507)
[»] chr3 (56 HSPs)
chr3 (17-95)||(1835084-1835162)
chr3 (17-95)||(41844425-41844503)
chr3 (17-98)||(46388889-46388970)
chr3 (17-97)||(42904243-42904323)
chr3 (17-95)||(35743352-35743431)
chr3 (17-95)||(34045342-34045420)
chr3 (17-97)||(4008383-4008463)
chr3 (17-95)||(16444542-16444620)
chr3 (21-95)||(29008820-29008894)
chr3 (30-95)||(2967999-2968064)
chr3 (20-97)||(3975664-3975741)
chr3 (17-98)||(19988391-19988472)
chr3 (17-95)||(50481444-50481522)
chr3 (30-95)||(46697645-46697710)
chr3 (30-95)||(49144530-49144595)
chr3 (17-90)||(8161030-8161104)
chr3 (17-95)||(12898747-12898825)
chr3 (17-95)||(27739627-27739705)
chr3 (50-96)||(34051440-34051486)
chr3 (17-95)||(46702086-46702164)
chr3 (17-95)||(50998740-50998818)
chr3 (17-98)||(54386064-54386146)
chr3 (30-95)||(35743654-35743719)
chr3 (50-103)||(54392122-54392175)
chr3 (30-97)||(25191853-25191920)
chr3 (17-96)||(34543196-34543275)
chr3 (45-103)||(12897751-12897809)
chr3 (17-95)||(16851061-16851139)
chr3 (17-95)||(26245270-26245348)
chr3 (17-95)||(27738543-27738621)
chr3 (17-90)||(30947714-30947788)
chr3 (30-96)||(41844082-41844148)
chr3 (30-95)||(2858030-2858095)
chr3 (50-99)||(6745420-6745469)
chr3 (30-95)||(9426565-9426630)
chr3 (18-95)||(28817062-28817139)
chr3 (50-95)||(46406718-46406763)
chr3 (50-95)||(49138515-49138560)
chr3 (30-98)||(3501969-3502037)
chr3 (50-90)||(3948667-3948707)
chr3 (19-95)||(11249586-11249662)
chr3 (19-95)||(42900111-42900187)
chr3 (50-101)||(4002669-4002720)
chr3 (20-94)||(1293312-1293386)
chr3 (17-95)||(11095144-11095222)
chr3 (30-96)||(42165097-42165163)
chr3 (35-96)||(2266964-2267025)
chr3 (50-95)||(2950267-2950312)
chr3 (50-91)||(3953309-3953350)
chr3 (50-91)||(8156446-8156487)
chr3 (14-95)||(19750070-19750151)
chr3 (50-91)||(30943127-30943168)
chr3 (30-96)||(1835401-1835464)
chr3 (1-33)||(3948744-3948776)
chr3 (50-98)||(11248489-11248537)
chr3 (1-33)||(30947679-30947711)
[»] chr2 (55 HSPs)
chr2 (17-95)||(44100636-44100714)
chr2 (17-92)||(22003462-22003537)
chr2 (17-101)||(39800713-39800797)
chr2 (17-97)||(42505823-42505903)
chr2 (19-95)||(45428550-45428626)
chr2 (17-96)||(30497010-30497089)
chr2 (17-95)||(20937832-20937910)
chr2 (17-95)||(39793897-39793975)
chr2 (17-95)||(43619203-43619281)
chr2 (17-91)||(43978474-43978548)
chr2 (30-95)||(17420502-17420567)
chr2 (20-101)||(39947528-39947609)
chr2 (39-95)||(38945696-38945752)
chr2 (30-97)||(30493291-30493358)
chr2 (17-96)||(43312665-43312744)
chr2 (17-91)||(3940790-3940864)
chr2 (30-96)||(5355605-5355671)
chr2 (17-95)||(10424774-10424852)
chr2 (21-95)||(15831061-15831135)
chr2 (17-95)||(20951106-20951184)
chr2 (17-95)||(28468575-28468653)
chr2 (26-95)||(21998148-21998217)
chr2 (20-95)||(26543238-26543313)
chr2 (17-96)||(29074063-29074142)
chr2 (17-90)||(213513-213587)
chr2 (17-90)||(10624526-10624600)
chr2 (33-95)||(42499687-42499749)
chr2 (6-86)||(41559984-41560065)
chr2 (50-98)||(17426492-17426540)
chr2 (17-97)||(30803078-30803158)
chr2 (19-95)||(39951212-39951288)
chr2 (17-95)||(5351897-5351976)
chr2 (50-97)||(43536034-43536081)
chr2 (17-90)||(18003333-18003407)
chr2 (17-95)||(28419342-28419420)
chr2 (50-91)||(3935768-3935809)
chr2 (37-98)||(7267525-7267586)
chr2 (21-98)||(36509900-36509977)
chr2 (201-257)||(26328010-26328066)
chr2 (17-97)||(36510916-36510996)
chr2 (17-85)||(39489128-39489196)
chr2 (39-90)||(5334515-5334566)
chr2 (50-97)||(5351826-5351873)
chr2 (50-97)||(24749618-24749665)
chr2 (50-96)||(15835305-15835351)
chr2 (45-95)||(39033033-39033083)
chr2 (17-71)||(41273308-41273362)
chr2 (50-91)||(208948-208989)
chr2 (19-92)||(43539800-43539873)
chr2 (50-91)||(43984428-43984469)
chr2 (50-95)||(44100892-44100937)
chr2 (1-33)||(213478-213510)
chr2 (45-97)||(3085969-3086021)
chr2 (1-33)||(10624491-10624523)
chr2 (1-33)||(18003298-18003330)
[»] chr6 (18 HSPs)
chr6 (17-95)||(26711983-26712060)
chr6 (30-103)||(27616641-27616714)
chr6 (20-96)||(13382562-13382638)
chr6 (17-95)||(6760932-6761010)
chr6 (20-97)||(11688046-11688123)
chr6 (31-91)||(30829726-30829786)
chr6 (50-95)||(11694154-11694199)
chr6 (34-90)||(1612826-1612882)
chr6 (30-96)||(6207167-6207233)
chr6 (17-95)||(32691085-32691163)
chr6 (39-96)||(18346974-18347031)
chr6 (50-95)||(30825984-30826029)
chr6 (50-98)||(27641845-27641893)
chr6 (20-95)||(3501086-3501161)
chr6 (35-94)||(8707917-8707976)
chr6 (21-95)||(13164321-13164395)
chr6 (26-99)||(17597594-17597667)
chr6 (50-95)||(18351737-18351782)
[»] chr5 (24 HSPs)
chr5 (17-95)||(27659874-27659952)
chr5 (17-96)||(11027028-11027107)
chr5 (17-95)||(8574617-8574694)
chr5 (17-95)||(13837658-13837736)
chr5 (17-96)||(11033523-11033602)
chr5 (26-96)||(8580549-8580619)
chr5 (50-95)||(19041211-19041256)
chr5 (30-95)||(38860242-38860307)
chr5 (30-97)||(28238071-28238138)
chr5 (17-95)||(28241860-28241938)
chr5 (17-95)||(38853413-38853491)
chr5 (34-90)||(14279788-14279844)
chr5 (39-95)||(37820930-37820986)
chr5 (30-97)||(28876575-28876642)
chr5 (50-95)||(19035139-19035184)
chr5 (17-86)||(28886454-28886523)
chr5 (50-95)||(37814516-37814561)
chr5 (17-101)||(3891412-3891496)
chr5 (26-97)||(42912947-42913018)
chr5 (17-91)||(5715-5789)
chr5 (17-95)||(14723-14801)
chr5 (17-95)||(3892497-3892575)
chr5 (17-97)||(30705069-30705149)
chr5 (44-100)||(38407128-38407184)
[»] scaffold0293 (1 HSPs)
scaffold0293 (17-92)||(783-858)
[»] chr1 (38 HSPs)
chr1 (17-95)||(19924689-19924767)
chr1 (17-95)||(3732414-3732492)
chr1 (17-95)||(13629338-13629416)
chr1 (17-95)||(38633214-38633292)
chr1 (17-97)||(586665-586745)
chr1 (19-95)||(30889995-30890071)
chr1 (18-98)||(44621179-44621259)
chr1 (21-95)||(8473717-8473791)
chr1 (30-95)||(8548743-8548808)
chr1 (30-95)||(26879369-26879434)
chr1 (30-97)||(3728667-3728734)
chr1 (20-95)||(30195447-30195522)
chr1 (17-95)||(2365169-2365247)
chr1 (17-90)||(3983025-3983099)
chr1 (17-95)||(26875627-26875705)
chr1 (17-90)||(31945922-31945996)
chr1 (17-90)||(38776187-38776261)
chr1 (21-95)||(43012709-43012783)
chr1 (34-90)||(20349396-20349452)
chr1 (17-95)||(585589-585667)
chr1 (17-95)||(19161827-19161905)
chr1 (21-95)||(19914401-19914475)
chr1 (17-95)||(22397754-22397832)
chr1 (17-95)||(22528658-22528736)
chr1 (17-95)||(43011762-43011840)
chr1 (17-95)||(47652662-47652740)
chr1 (45-98)||(4883165-4883218)
chr1 (50-95)||(19928939-19928984)
chr1 (17-69)||(38632452-38632504)
chr1 (50-100)||(3993937-3993987)
chr1 (30-95)||(15051422-15051487)
chr1 (50-91)||(20354029-20354070)
chr1 (50-91)||(20556836-20556877)
chr1 (50-95)||(30905705-30905750)
chr1 (50-91)||(38771567-38771608)
chr1 (1-33)||(3983102-3983134)
chr1 (30-102)||(27649184-27649256)
chr1 (1-33)||(31945887-31945919)
[»] scaffold0634 (1 HSPs)
scaffold0634 (17-96)||(7351-7430)
[»] scaffold0494 (2 HSPs)
scaffold0494 (17-95)||(11514-11592)
scaffold0494 (50-96)||(764-810)
[»] scaffold0101 (1 HSPs)
scaffold0101 (21-95)||(41121-41195)
[»] scaffold0744 (1 HSPs)
scaffold0744 (30-95)||(496-561)
[»] scaffold0094 (1 HSPs)
scaffold0094 (35-96)||(236-297)
[»] scaffold0014 (1 HSPs)
scaffold0014 (50-95)||(84481-84526)
[»] scaffold0260 (1 HSPs)
scaffold0260 (34-90)||(11719-11775)
[»] scaffold0016 (2 HSPs)
scaffold0016 (17-96)||(69281-69360)
scaffold0016 (40-95)||(68349-68404)
[»] scaffold0199 (1 HSPs)
scaffold0199 (17-95)||(10587-10665)
[»] scaffold1606 (1 HSPs)
scaffold1606 (50-95)||(55-100)
[»] scaffold0180 (1 HSPs)
scaffold0180 (20-95)||(15685-15760)
[»] scaffold0116 (1 HSPs)
scaffold0116 (50-95)||(11235-11280)


Alignment Details
Target: chr7 (Bit Score: 167; Significance: 2e-89; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 102 - 306
Target Start/End: Original strand, 36220749 - 36220961
Alignment:
Q  102 tatccacaactacaaacttatatatgattgtatccttctggcaactacaaacataatttacatcacaactccattaatttctactatttcctgattaa-- 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||      
T  36220749 tatccacaactacaaacttatatatgattgtatccttctggcaactacaaacataatttacatcccaactccattaatttctactatttcctgattaaca 36220848  T
Q  200 --gacatggctgaatca----tttgtgtttgatattgctgattcactgcttggaaagcttgcttatgcttttgagcaagcttctcgtgcctactgtgtgt 293  Q
      |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36220849 ttgacatggctgaatcatttgtttgtgtttgatattgctgattcactgcttggaaagcttgcttatgcttttgagcaagcttctcgtgcctaccgtgtgt 36220948  T
Q  294 atgatgatgtcca 306  Q
    |||||||| ||||    
T  36220949 atgatgatctcca 36220961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10098178 - 10098256
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10098178 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 10098256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 42508088 - 42508166
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  42508088 cggcagtttactaccgaagggcatttccgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 42508166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 15074289 - 15074367
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  15074289 cggcagtttactaccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 18105385 - 18105305
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| || ||||||| ||||||||||||| ||||||||||    
T  18105385 cggcagtttactaccgaaggacatttccgtattttactcgtgtggtacggccatactatatgtgggaacaacaattctctt 18105305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 46907552 - 46907473
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||| ||||| |||| |||||||||||||||||||||    
T  46907552 cggcagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctct 46907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 48403384 - 48403301
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaa 100  Q
    |||||||| ||| |||||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  48403384 cggcagttaactgccgaagggcatttttgtattttactggtgtggcacagccatactatatgtgggaacagcaatactcttaaa 48403301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35610476 - 35610554
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||| ||||||| ||||  ||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35610476 cggcagttaactgccgaatggcattttcgtattttactggtgtggcacagccatactatatgtgggaacagcaattctc 35610554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 36226721 - 36226614
Alignment:
Q  202 catggctgaatcatttgtgtttgatattgctgattcactgcttggaaagct---tgcttatgcttttgagcaagcttctcgtgcctactgtgtgtatgat 298  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||   | |||||| || |||  |||||||||| |||||  ||||||||||     
T  36226721 catggccgaatcatttgtgtttgatattgctgattcgctgcttggaaagcttagttcttatgtttgtgaagaagcttctcgagcctatggtgtgtatgaa 36226622  T
Q  299 gatgtcca 306  Q
    ||| ||||    
T  36226621 gatctcca 36226614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 12210650 - 12210730
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| |||| ||||||||  |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  12210650 cggcagttaactgccgaggggcatttgagtaatttactcgtatggcacagccaaaccaaatgtgggaacagcaattctctt 12210730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 7975670 - 7975749
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||| ||||||| ||||| |||||  ||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  7975670 cggcagtttactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctct 7975749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 41880522 - 41880448
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| ||||||||||||| ||||  |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  41880522 agttaactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 41880448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 40141296 - 40141361
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||| ||||    
T  40141296 actaccgaagggcatttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaat 40141361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 618808 - 618864
Alignment:
Q  39 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||    
T  618808 atttgcgtaaattactcgtgtggcacagccatactatatgtgggaagagcaattctc 618864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 49141680 - 49141760
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaa 99  Q
    |||||| ||| |||| ||||||||  |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||||||    
T  49141680 gcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctcttaa 49141760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 603778 - 603711
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||  |||  |||||||||||||||||||| || | ||||||||||||||||||||||    
T  603778 ccgaagggcattttggtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctctt 603711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 17465777 - 17465852
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| |||||||| |||| ||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  17465777 cagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatgtgggaacatcaattctc 17465852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 17587437 - 17587362
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| |||||||| |||| ||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  17587437 cagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatgtgggaacatcaattctc 17587362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 18109838 - 18109913
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||| |||||||||||||   ||| |||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  18109838 cagtttactgccgaagggcatttgaataatttactcgtgtagcacagccaaaccaaatgtgggaacaacaattctc 18109913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 42582128 - 42582049
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||| || |||||  |||| |||||||||||||| ||||| |||| |||||||||||||||||||||    
T  42582128 cggcagttaactgccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctct 42582049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 45763392 - 45763313
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||    
T  45763392 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaaatctc 45763313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 7078 - 7004
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||| ||||||||  |||| |||||||||||||||||||| || | ||||||||||||||||||||    
T  7078 agttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 30786559 - 30786485
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  30786559 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 30786485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 35978274 - 35978178
Alignment:
Q  202 catggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttg---cttatgcttttgagcaagcttctcgtgcctactgtgtgtat 295  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||| ||||   ||||||||| |||  |||||||||  |||||  ||||||||    
T  35978274 catggctgaatcatttgtgtttgatattgctcattcactgttaggaaaacttgcatcttatgcttatgaagaagcttctctagcctatggtgtgtat 35978178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 35999686 - 35999590
Alignment:
Q  202 catggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttg---cttatgcttttgagcaagcttctcgtgcctactgtgtgtat 295  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||| ||||   ||||||||| |||  |||||||||  |||||  ||||||||    
T  35999686 catggctgaatcatttgtgtttgatattgctcattcactgttaggaaaacttgcatcttatgcttatgaagaagcttctctagcctatggtgtgtat 35999590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 43032986 - 43032912
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| |||||||| |||| |||| ||||| ||| | ||||||||||||||||| |||||||||||||||||    
T  43032986 cggcagttaactaccgagagggtatttgcgtaaattattggtgtggcacagccatactatatgtgggaacagcaa 43032912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 10524420 - 10524497
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||| ||| |||| ||||||||  |||| ||||||||||| |||||||| |||| ||||||||||| ||||||||||    
T  10524420 cagttaactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctt 10524497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 20564072 - 20564007
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  |||||||| ||||||| |||||| ||||||||||||||||||||||    
T  20564072 ccgaagggcattttggtattttactcgtatggcacaaccatactatatgtgggaacagcaattctc 20564007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 27657050 - 27656973
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||| |||| ||||||||   ||| |||||||||||||||| ||| |||| ||||||||||||||||||||    
T  27657050 ggcagttaactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaatgtgggaacagcaattctc 27656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 240
Target Start/End: Original strand, 36210862 - 36210902
Alignment:
Q  200 gacatggctgaatcatttgtgtttgatattgctgattcact 240  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  36210862 gacatggctgaatcatttgtgtttaatattgctgattcact 36210902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 10097915 - 10097848
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||| ||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||||    
T  10097915 ccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 10097848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 13921324 - 13921403
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||| | ||||||  |||| |||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  13921324 cggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctct 13921403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 20566453 - 20566500
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||    
T  20566453 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctctt 20566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 8111 - 8185
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||| ||||||||  |||| ||||| |||||||||||||| || | ||||||||||||||||||||    
T  8111 agttaactgccgaggggcatttgagtaatttacttgtgtggcacagccaaacaacatgtgggaacagcaattctc 8185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 41884200 - 41884266
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||| ||||| ||||  |||||||||||||||||||| || | ||||||||| |||||||||||    
T  41884200 ccgaaggacattttcgtattttactcgtgtggcacagccacacaacatgtgggaatagcaattctct 41884266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 46908566 - 46908612
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||    
T  46908566 ttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctct 46908612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 10098312 - 10098267
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  10098312 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 10098267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 45258066 - 45258142
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||| |||| ||||||||  |||| |||||||||||||||||||| | || ||||| ||||| ||||||||    
T  45258066 gcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaatcaaatgtgagaacaacaattctc 45258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 9371448 - 9371527
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccatacc-atatgtgggaacagcaattctc 95  Q
    |||||||| ||| || ||||||||||  |||  ||||| |||||||||| ||||||| ||||||||||||| ||||||||    
T  9371448 cggcagttaactgccaaagggcattttggtattttacttgtgtggcacaaccatacctatatgtgggaacaacaattctc 9371527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 16636336 - 16636383
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||||    
T  16636336 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 16636383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 17459302 - 17459255
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||||    
T  17459302 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 17459255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 17593912 - 17593959
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||||    
T  17593912 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctctt 17593959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 17834500 - 17834449
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 68  Q
    |||||||| ||| ||||||||||||| | ||| |||||||||||||||||||    
T  17834500 cggcagttaactgccgaagggcattttcataaattactcgtgtggcacagcc 17834449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 48407415 - 48407462
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||||    
T  48407415 ttactcgtgtggcacagccaaacaacatgtgggaagagcaattctctt 48407462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10168319 - 10168397
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| || ||||||||||   ||  |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  10168319 cggcagttaactgccaaagggcattttgatattttactcgtgtagcacatccatactatatgtgggaacaacaattctc 10168397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 10175844 - 10175922
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| || ||||||||||   ||  |||||||||| ||||| |||||| ||||||||||||| ||||||||    
T  10175844 cggcagttaactgccaaagggcattttgatattttactcgtgtagcacatccatactatatgtgggaacaacaattctc 10175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 30471601 - 30471651
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 68  Q
    ||||||| |||||||| ||||||||| |||| ||||||||||| |||||||    
T  30471601 ggcagttaactaccgaggggcatttcagtaaattactcgtgtgacacagcc 30471651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 35958819 - 35958723
Alignment:
Q  202 catggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttg---cttatgcttttgagcaagcttctcgtgcctactgtgtgtat 295  Q
    |||||| ||||||||||  ||||||||||||  ||||||| | ||||| ||||   ||||||||| |||  ||||||||||||||||  ||||||||    
T  35958819 catggcagaatcatttgcctttgatattgctcgttcactgttaggaaaacttgcatcttatgcttatgaagaagcttctcgtgcctatggtgtgtat 35958723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 35974139 - 35974085
Alignment:
Q  203 atggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttgctt 257  Q
    |||||| |||||||||| || |||||||||||||| ||||| || ||||||||||    
T  35974139 atggctaaatcatttgtcttagatattgctgattctctgctagggaagcttgctt 35974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 35995551 - 35995497
Alignment:
Q  203 atggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttgctt 257  Q
    |||||| |||||||||| || |||||||||||||| ||||| || ||||||||||    
T  35995551 atggctaaatcatttgtcttagatattgctgattctctgctagggaagcttgctt 35995497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 306
Target Start/End: Original strand, 36216868 - 36216968
Alignment:
Q  209 gaatcatttgtgtttgatattgctgattcactgcttggaaagcttg---cttatgcttttgagcaagcttctcgtgcctactgtgtgtatgatgatgtcc 305  Q
    |||||||||||||||||| ||||| |||||||| | || || ||||   ||||||||| |||  |||| |||||||||||| |||| ||||| ||| |||    
T  36216868 gaatcatttgtgtttgatgttgctaattcactgttagggaaacttgcttcttatgcttatgaagaagcctctcgtgcctacggtgtatatgaagatctcc 36216967  T
Q  306 a 306  Q
    |    
T  36216968 a 36216968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 42795168 - 42795218
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  42795168 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 42795218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 43624206 - 43624276
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaaca 86  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| |||||||||| |||||| |||||||||||||    
T  43624206 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaaca 43624276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 9365625 - 9365584
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || |||||| |||||||||||    
T  9365625 ttactcgtgtggcacagccaaactatatgtaggaacagcaat 9365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 28564608 - 28564673
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||||||||  |||| |||||||||||||||| ||| |||| || |||||||| ||||||||    
T  28564608 ccgatgggcatttgagtaatttactcgtgtggcacaaccaaaccaaatatgggaacaacaattctc 28564673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 30791102 - 30791143
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  30791102 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 30791143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 35606788 - 35606723
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| |||||| ||||  ||||||||||||||||| || || | ||||||||||| ||||||||    
T  35606788 ccgaagagcattttcgtattttactcgtgtggcacaggcaaacaacatgtgggaacaacaattctc 35606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 43619684 - 43619643
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  43619684 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 43619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30791066 - 30791034
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30791066 gtttttaggaaaccggcggcagttaactaccga 30791034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 35931068 - 35930982
Alignment:
Q  202 catggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttg---cttatgcttttgagcaagcttctcgtgccta 285  Q
    |||||||||||||||||  |||||||||| | |||||||  | ||||| ||||   ||||||||| |||  ||||||||||||||||    
T  35931068 catggctgaatcatttgcctttgatattgttcattcactattaggaaaacttgcatcttatgcttatgaagaagcttctcgtgccta 35930982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 35982843 - 35982791
Alignment:
Q  201 acatggctgaatcatttgtgtttgatattgctgattcactgcttggaaagctt 253  Q
    ||||||| ||||||||||| || ||  |||| |||||||||||||||||||||    
T  35982843 acatggcagaatcatttgtcttcgacgttgccgattcactgcttggaaagctt 35982791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 36004255 - 36004203
Alignment:
Q  201 acatggctgaatcatttgtgtttgatattgctgattcactgcttggaaagctt 253  Q
    ||||||| ||||||||||| || ||  |||| |||||||||||||||||||||    
T  36004255 acatggcagaatcatttgtcttcgacgttgccgattcactgcttggaaagctt 36004203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 40928988 - 40929060
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagca 89  Q
    |||||||||||| ||||| |||||||  |||| ||| |||||||||||| ||| | || ||||||||| ||||    
T  40928988 cggcagtttactgccgaaaggcatttgagtaaattattcgtgtggcacaaccaaatcaaatgtgggaagagca 40929060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43032989 - 43033021
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  43032989 gtttttaggaaaccggcggcagttaactaccga 43033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 45767955 - 45768002
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||||||||||||||| | || |||||||||||||||| ||||||    
T  45767955 ttactcgtgtggcacagcca-aacaaatgtgggaacagcaatactctta 45768002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 184613 - 184691
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  184613 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 184691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 36677990 - 36678068
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36677990 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 36678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 22014496 - 22014574
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  22014496 cggcagtttactaccgaagggcatttccgtaatttactcgtgtggcacagccataccatacgtgcgaagagcaattctc 22014574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 15030896 - 15030817
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||| |||||||||    
T  15030896 cggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctct 15030817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 45066422 - 45066501
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||| |||||||||    
T  45066422 cggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctct 45066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 1052570 - 1052491
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||||||||||||||||| ||||  ||||| |||||||||| |||||| |||||||||||||||||||||||    
T  1052570 cggcagttaactaccgaagggcattttcgtattttactggtgtggcacatccatactatatgtgggaacagcaattctct 1052491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 15036764 - 15036840
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 94  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||| || || |||||||||| |||||||    
T  15036764 ggcaatttactaccgaagggcatttgcgtaatttactcgtgtggcacagccaaactatgtgtgggaacaacaattct 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 489690 - 489765
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  489690 cagttaactgccgaagggcattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 489765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 26659466 - 26659391
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 92  Q
    |||||||| ||| ||||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  26659466 cggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatgtgggaacagcaatt 26659391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 25595 - 25674
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||   ||  ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  25595 cggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 25674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 28618496 - 28618575
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||  |||| ||||| |||||||| ||||| |||| |||||||||||||||||||||    
T  28618496 cggcagttaactgccgaagggcatttgggtaaattacttgtgtggcatagccaaaccaaatgtgggaacagcaattctct 28618575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 22510560 - 22510486
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  22510560 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgagaacagcaat 22510486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 28617581 - 28617503
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||||||||||||    
T  28617581 cggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctc 28617503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 22014245 - 22014180
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  22014245 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 22014180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 42485632 - 42485677
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42485632 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 23022351 - 23022426
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| ||||||||||||| ||||  |||||  |||||||||||||||| ||||||||||||| ||||||||    
T  23022351 cagttaactgccgaagggcattttcgtattttactgatgtggcacagccatactatatgtgggaacaacaattctc 23022426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 30305604 - 30305678
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  30305604 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 30305678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 32378982 - 32379056
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  32378982 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 32379056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 32432937 - 32433011
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  32432937 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 32433011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 32585050 - 32585128
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| |||||||| || |||||  |||| |||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  32585050 cggcagttaactaccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaatagcaattctc 32585128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 184374 - 184309
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||    
T  184374 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 914732 - 914655
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||| |||||||||||||  |||| |||||||| ||||| ||||| |||| ||||||||||| ||||||||    
T  914732 ggcagttaactgccgaagggcatttgggtaaattactcgtctggcatagccaaaccaaatgtgggaacaacaattctc 914655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 86
Target Start/End: Complemental strand, 5532474 - 5532405
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaaca 86  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||| ||||| |||| |||||||||||    
T  5532474 cggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaaca 5532405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 23018684 - 23018619
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | |||||| |||||||||||||    
T  23018684 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtggaaacagcaattctc 23018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 36677711 - 36677646
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||    
T  36677711 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 36677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 2416215 - 2416135
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| |||  |||||| |||||  |||  ||||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  2416215 cggcagttaactgtcgaaggacattttggtattttacttgtgtggcacagccatactatatgtgggaacaacaattctctt 2416135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 43211544 - 43211472
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagca 89  Q
    |||||||  ||| ||||||||||||| |||||  ||||||||||||||||||  |||| ||||||||||||||    
T  43211544 cggcagtaaactgccgaagggcattttcgtaaagtactcgtgtggcacagccgaaccaaatgtgggaacagca 43211472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 2335212 - 2335286
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||| ||||||||  |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  2335212 agttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 2335286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 7340079 - 7340005
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||| ||||||||    
T  7340079 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtggaaacagcaa 7340005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 22550925 - 22551003
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| ||||||||||||||||||| || || |||||  |||| ||||||||    
T  22550925 cggcagttaactgccgaagggcatttaggtaaattactcgtgtggcacagccttatcaaatgtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 27501585 - 27501535
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||||||||||||||||| |||| | ||||||||||||||||||    
T  27501585 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctc 27501535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 44933872 - 44933794
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| ||||||||||||||  |||| |||| ||||||||||| ||||||||    
T  44933872 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcagtgccaaaccaaatgtgggaacaccaattctc 44933794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 21785 - 21720
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||    
T  21785 ccgaatggcattttcgtattttactcgtgtggcacagccaaacaagatgtgggaacaacaattctc 21720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 22519669 - 22519734
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  |||||||||||||||| ||| || |||||||||||||| |||||||    
T  22519669 ccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgggaacagtaattctc 22519734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 27502628 - 27502705
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||| ||| |||| ||||||||  |||| |||||||||||||| ||||| |||| |||| |||||| ||||||||||    
T  27502628 cagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtaggaacaacaattctctt 27502705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 915709 - 915773
Alignment:
Q  31 cgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  915709 cgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 915773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 5533113 - 5533169
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||| |||||||||||||||||||| | || | ||||||||| ||||||||||||||    
T  5533113 gtaatttactcgtgtggcacagccaaatcaaaagtgggaacaacaattctcttaaaa 5533169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 26663127 - 26663174
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||| ||||||||||||    
T  26663127 ttactcgtgtggcacagccaaacaaaatgtgggaatagcaattctctt 26663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 32375630 - 32375583
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||    
T  32375630 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactctt 32375583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 39831169 - 39831090
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| |||||||| ||||||||  |||| ||||||||||| | |||||| |||| |||||  |||| |||||||||    
T  39831169 cggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaaccaaatgtgtcaacaacaattctct 39831090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 45409884 - 45409833
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcc 68  Q
    |||||||| ||| ||||||||||||| |||||  ||||||||||||||||||    
T  45409884 cggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacagcc 45409833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 8423850 - 8423920
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaaca 86  Q
    |||||||| ||| |||| |||| |||| ||||| ||| | ||||||||||||||||| |||||||||||||    
T  8423850 cggcagttaactgccgagagggtatttgcgtaaattaatggtgtggcacagccatactatatgtgggaaca 8423920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 31185533 - 31185583
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  31185533 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 31185583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 43363348 - 43363398
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  43363348 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 43363398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 483782 - 483721
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||  |||  |||||||||||||||| ||| || ||||||||||||| ||||    
T  483782 ccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgggaacaacaat 483721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 1056275 - 1056340
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||||||||| ||||| || || | ||||||||||| ||||||||    
T  1056275 ccgaagggcattttcgtattttactcgtgtgacacagtcaaacaagatgtgggaacaacaattctc 1056340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 7344651 - 7344692
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  7344651 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 7344692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 17924080 - 17924040
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||||||||||||||| || | |||||||||||||||    
T  17924080 ttactcgtgtggcacagccaaacaacatgtgggaacagcaa 17924040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30305601 - 30305569
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30305601 gtttttaggaaaccggcggcagttaactaccga 30305569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 32584062 - 32583986
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||| |||||||| ||| ||||  |||| |||||||||||||||||| | |  | | |||||||||||||||||||    
T  32584062 cagttaactaccgaggggtatttgagtaatttactcgtgtggcacagctaaagtaaaagtgggaacagcaattctct 32583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-37; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 52529225 - 52529147
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52529225 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 52529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 54634076 - 54634154
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54634076 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 54634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 37563344 - 37563420
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37563344 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccttaccatatgtgggaacagcaattctct 37563420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 30726802 - 30726883
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||||||||||||||| ||||||||||  |||||||||||||||| |||||| |||||||||||||||||||||||||    
T  30726802 cggcagtttactaccgaaggacatttccgtattttactcgtgtggcacatccatactatatgtgggaacagcaattctctta 30726883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 26932596 - 26932517
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||||| |||||  |||| ||||||||||| |||||||| || |||||||||||||||||||||||    
T  26932596 cggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaactatatgtgggaacagcaattctct 26932517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 39773416 - 39773362
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccata 71  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39773416 cggcagtttactaccgaaggacatttccgtaacttactcgtgtggcacagccata 39773362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 40352378 - 40352300
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||| |||||| ||||  |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  40352378 cggcagtttactaccgaagagcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 40352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 49090459 - 49090381
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  49090459 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 55588344 - 55588423
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||| ||||| |||| |||||||||||||||||||||    
T  55588344 cggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctct 55588423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 6181852 - 6181930
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  6181852 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 6181930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 21022948 - 21023026
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  21022948 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 21023026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 30723124 - 30723054
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||||||| ||||  |||||||||||||||||||| || | |||||||||||||||||||||    
T  30723124 actaccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctct 30723054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31421718 - 31421640
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||||||||||| ||||  ||||| ||||||||||||||||| ||||||| ||||||||||||||    
T  31421718 cggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatgtgagaacagcaattctc 31421640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 1089658 - 1089723
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1089658 ccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 55587371 - 55587290
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  55587371 cggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctctta 55587290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 9893327 - 9893399
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||| ||| ||||||||||||| ||||  ||||| ||||||||||||||||| ||||||||||||||||||    
T  9893327 gcagttaactgccgaagggcattttcgtattttacttgtgtggcacagccatactatatgtgggaacagcaat 9893399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13173246 - 13173168
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| |||  ||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  13173246 cggcagttaactgtcgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacatcaattctc 13173168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 98
Target Start/End: Original strand, 13182162 - 13182240
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    ||||| ||| ||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  13182162 cagttaactgccgaaaggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctctta 13182240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 14201587 - 14201665
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  14201587 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 14201665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 26792305 - 26792383
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| | | |||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  26792305 cggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 26792383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 1087859 - 1087794
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||  |||||||||||||||| ||||||||||||||||||||||    
T  1087859 ccgaagggcattttcgtattttactgatgtggcacagccatactatatgtgggaacagcaattctc 1087794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 1309175 - 1309252
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 94  Q
    |||||||| ||| |||||||||||||  |||  |||||||||||||||| |||||| |||||||||| ||||||||||    
T  1309175 cggcagttaactgccgaagggcatttttgtattttactcgtgtggcacaaccatactatatgtgggagcagcaattct 1309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 41801031 - 41801078
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  41801031 ttactcgtgtgacacagccatactatatgtgggaacagcaattctctt 41801078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 54633811 - 54633744
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||||| ||||  ||||||||||||||||| || || | ||||||||||||||||||||||    
T  54633811 ccgaagggcattttcgtattttactcgtgtggcacagtcaaacaacatgtgggaacagcaattctctt 54633744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 3408301 - 3408379
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||  ||||||||||||  |||| |||||||||||| ||| ||| |||| ||||||||||| ||||||||    
T  3408301 cggcagtttactgtcgaagggcatttgagtaatttactcgtgtggtacaaccaaaccaaatgtgggaacaacaattctc 3408379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 23221727 - 23221805
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||   ||| |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  23221727 cggcagttaactgccgaagggcatttgaataaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 23221805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31242228 - 31242150
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| ||||||||||||||||| || | || ||||||| ||||||||||||    
T  31242228 cggcagttaactgccgaagggcatttgagtaatttactcgtgtggcacagtcaaatcaaatgtgggcacagcaattctc 31242150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 46253499 - 46253421
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||||| ||| || |||||||||||||| |||||||    
T  46253499 cggcagttaactgccgatgggcatttgagtaatttactcgtgtggcacaaccaaactatatgtgggaacagtaattctc 46253421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 7485724 - 7485801
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||| ||| |||| ||||||||  |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||||    
T  7485724 cagttaactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctctt 7485801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 37563064 - 37562999
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||||||||| |||||||| || | ||||||||||||||||||||    
T  37563064 ccgaagggcattttcgtattttactcgtgtgacacagccaaacaacatgtgggaacagcaattctc 37562999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 40832658 - 40832581
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||| |||| ||||||||   ||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  40832658 ggcagttaactgccgaggggcatttgaataatttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 40832581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 49096425 - 49096490
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  |||||||||||||||| ||| || ||||||||||||||||||||||    
T  49096425 ccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgggaacagcaattctc 49096490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 49169171 - 49169236
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  49169171 ccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 49169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 7484743 - 7484659
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||| ||| |||| ||||||||   ||| |||||||||||||| ||||| |||| ||||||||||| |||||||| |||||    
T  7484743 cggcagttaactgccgaggggcatttggataaattactcgtgtggcatagccaaaccaaatgtgggaacatcaattctcataaaa 7484659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 49566510 - 49566594
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaa 100  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| |||||||||| |||||| |||||||||||||||||  ||||||||    
T  49566510 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaacagcaaaactcttaaa 49566594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 39773635 - 39773682
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||    
T  39773635 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctctt 39773682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 41793310 - 41793259
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||| ||||||||||| || ||||||||||||||||||||||| ||||    
T  41793310 ttactcgtatggcacagccaaactatatgtgggaacagcaattctctaaaaa 41793259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 23220691 - 23220613
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| || ||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  23220691 cggcagttaactgccaaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 23220613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 51037528 - 51037606
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| || |||||  |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  51037528 cggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaatgtgggaacaacaattctc 51037606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 31425392 - 31425457
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||    
T  31425392 ccgaaggacattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 31425457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 96
Target Start/End: Original strand, 40358355 - 40358420
Alignment:
Q  31 cgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||| ||||  |||||||||||||||||||| || | ||||||||| |||||| ||||    
T  40358355 cgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaatagcaatactct 40358420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 6175826 - 6175780
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||||    
T  6175826 ttactcgtgtggcacagccaaactatatgtgggaacaacaatactct 6175780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 38368244 - 38368166
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||||| |||||   ||| |||||||||||||| ||||| || | ||||||||||| ||||||||    
T  38368244 cggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctc 38368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 38369242 - 38369320
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||  |||| |||||||| ||||||||||| |||| | ||| ||| ||||||||||    
T  38369242 cggcagttaactgccgaagggtatttgagtaatttactcgtatggcacagccaaaccaaaagtgagaatagcaattctc 38369320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 53536005 - 53535927
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| ||||| ||||| ||||||||   ||||||||  |||||||||||||    
T  53536005 cggcagttaactgccgaagggcattttagtaaattactagtgtgacacagccaatgcatatgtgtcaacagcaattctc 53535927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 55799654 - 55799699
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  55799654 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 55799699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 16473740 - 16473788
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcaca 65  Q
    |||||||| ||| ||||||||||||| |||||  |||||||||||||||    
T  16473740 cggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcaca 16473788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 26933329 - 26933405
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||| ||||||   ||| |||||||||||||||| ||| || | | ||| ||||| |||||||||    
T  26933329 cagtttactaccgaagagcatttgattaatttactcgtgtggcacaaccaaactacacgtgcgaacatcaattctct 26933405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 49165054 - 49164997
Alignment:
Q  36 ggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||||  |||||||||||||||| ||||||  ||| |||||||||||||||||    
T  49165054 ggcattttcgtattttactcgtgtggcacaaccatac--tatatgggaacagcaattctc 49164997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 49566507 - 49566475
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  49566507 gtttttaggaaaccggcggcagttaactaccga 49566475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 6e-37; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 1835162 - 1835084
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1835162 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 1835084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 41844425 - 41844503
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  41844425 cggcaatttactaccgaaaggcatttccgtaacttactcgtgtggcacagccataccatatgtaggaacaacaattctc 41844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 46388970 - 46388889
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46388970 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctctta 46388889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 42904243 - 42904323
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| ||||||||||||| ||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42904243 cggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatgtgggaacagcaattctctt 42904323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 35743431 - 35743352
Alignment:
Q  17 cggcagtttactaccgaaggg-catttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||| ||||||||    
T  35743431 cggcaatttactaccgaaggggcatttccgtaacttactcgtgtggcacagccatactatatgtagcaacaacaattctc 35743352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 34045420 - 34045342
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  34045420 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 34045342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 4008383 - 4008463
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||| |||||||||||||  ||||  |||||||||||||| |||| |||| ||||||||||||||||||||||    
T  4008383 cggcagtttactgccgaagggcatttttgtaaaatactcgtgtggcacggccaaaccaaatgtgggaacagcaattctctt 4008463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 16444620 - 16444542
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  |||||||||||||||| |||||| ||||||||||||||||||||||    
T  16444620 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 16444542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 29008894 - 29008820
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| ||||||||||||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  29008894 agttaactgccgaagggcattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 29008820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2967999 - 2968064
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  2967999 ccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 2968064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 3975741 - 3975664
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||| ||||||||||||| |||||  ||||||||||||||||||| |||| ||||||| ||| ||||||||||    
T  3975741 cagtttactgccgaagggcattttcgtaaagtactcgtgtggcacagccaaaccaaatgtgggtacaacaattctctt 3975664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 19988472 - 19988391
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  19988472 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgagaacagcaattctctta 19988391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 50481444 - 50481522
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| || ||| ||||||||||||| ||||  ||||| |||||||||| |||||| ||||||||||||||||||||||    
T  50481444 cggcacttaactgccgaagggcattttcgtattttactggtgtggcacaaccatactatatgtgggaacagcaattctc 50481522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 46697710 - 46697645
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  46697710 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtgggaacagcaattctc 46697645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 49144530 - 49144595
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  ||||||||||| ||||||||||| ||||||||||||||||||||||    
T  49144530 ccgaagggcattttggtattttactcgtgtgacacagccatactatatgtgggaacagcaattctc 49144595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 8161030 - 8161104
Alignment:
Q  17 cggcagtttactaccgaa-gggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| ||||| ||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  8161030 cggcagttaactgccgaaagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 8161104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 12898747 - 12898825
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| |||  ||| ||||||||  |||| |||||||||||||| ||||| |||| ||||||||||||||||||||    
T  12898747 cggcagttaactgtcgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 12898825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 27739627 - 27739705
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  27739627 cggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 27739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 34051440 - 34051486
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  34051440 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctct 34051486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 46702086 - 46702164
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| | ||||| |||||  |||  |||||||||||||||| |||||| ||||||||||||||||||||||    
T  46702086 cggcagttaactgctgaaggacattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 46702164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 50998740 - 50998818
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||||||||| |||| ||| ||||||| ||||||||    
T  50998740 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgcgggaacaacaattctc 50998818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 54386146 - 54386064
Alignment:
Q  17 cggcagtttactaccgaa-gggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| ||| ||||| ||||||||  |||  ||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  54386146 cggcagttaactgccgaaagggcattttggtattttactcgtgtggcacagccatactatatgtgagaagagcaattctctta 54386064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 35743654 - 35743719
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  35743654 ccgaatggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 35743719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 54392122 - 54392175
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaata 103  Q
    |||||||||||||||||||| || |||||||||||||||||| |||| ||||||    
T  54392122 ttactcgtgtggcacagccaaactatatgtgggaacagcaatactctaaaaata 54392175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 25191920 - 25191853
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||||| ||||  |||||||||||||||||||  || | ||||||||| ||||||||||||    
T  25191920 ccgaagggcattttcgtattttactcgtgtggcacagccgaacaacatgtgggaagagcaattctctt 25191853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 34543196 - 34543275
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||| || |||||  |||| |||||| ||||||||||||| |||| ||||||||||| |||||||||    
T  34543196 cggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaaccaaatgtgggaacaacaattctct 34543275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 12897809 - 12897751
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaata 103  Q
    |||| |||||||||||||||||||| |||| | ||||||||| ||||||||| ||||||    
T  12897809 gtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctctaaaaata 12897751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 16851139 - 16851061
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||| ||||| || | ||||||||||| ||||||||    
T  16851139 cggcagttaactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctc 16851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 26245348 - 26245270
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||| ||||  |||| |||||||||||||||||||||| || | ||||||||| ||||||||    
T  26245348 cggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccatatcaaaagtgggaacaacaattctc 26245270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 27738621 - 27738543
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| |||||||||| ||| || || |||| ||||||||||| ||||||||    
T  27738621 cggcagttaactgccgaagggcatttgggtaaattactcgtgtagcatagtcaaaccaaatgtgggaacaacaattctc 27738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 30947714 - 30947788
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| |||||||||| |||||| |||||||||||||||||    
T  30947714 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactatatgtgggaacagcaa 30947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 41844148 - 41844082
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||  |||  |||||||||||||||||||| || | ||||||||| |||||||||||    
T  41844148 ccgaagggcatttttgtattttactcgtgtggcacagccaaacaacatgtgggaagagcaattctct 41844082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2858030 - 2858095
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||| ||| ||||  |||||||||||||||||||| || | ||||||||||| ||||||||    
T  2858030 ccgaagggcgttttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 2858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 6745420 - 6745469
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaa 99  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||    
T  6745420 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactcttaa 6745469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 9426630 - 9426565
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||| ||| ||| || | ||||||||||||||||||||    
T  9426630 ccgaagggcattttcgtattttactcgtgtggtacaaccaaacaacatgtgggaacagcaattctc 9426565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 28817062 - 28817139
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| ||| |||| ||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  28817062 ggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 28817139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 46406718 - 46406763
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||    
T  46406718 ttactcgtgtgacacagccaaactatatgtgggaacagcaattctc 46406763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 49138560 - 49138515
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||    
T  49138560 ttactcatgtggcacagccaaactatatgtgggaacagcaattctc 49138515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 3501969 - 3502037
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||||| || ||||  |||||||||||||||| ||| || | ||||||||||| |||||||||||    
T  3501969 ccgaagggcagtttcgtattttactcgtgtggcacaaccaaacaacatgtgggaacaacaattctctta 3502037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 3948707 - 3948667
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  3948707 ttactggtgtggcacagccatactatatgtgggaacagcaa 3948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 11249586 - 11249662
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||| |||||||| ||||  |||| |||||||||||||||||||| |  | | ||||||||||||||||||    
T  11249586 gcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaagtaaaagtgggaacagcaattctc 11249662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 42900187 - 42900111
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||| |||||||||||||  |||  |||||||||||||||||||| || | ||||||||||| ||| ||||    
T  42900187 gcagttaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaacatgtgggaacaacaactctc 42900111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 4002720 - 4002669
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||||||||||||||| |||| ||||||||||| ||| ||||| ||||    
T  4002720 ttactcgtgtggcacagccaaaccaaatgtgggaacaacaactctctaaaaa 4002669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 1293386 - 1293312
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 94  Q
    ||||||||| ||||||||||||| |||||  || |  ||||||||| ||| | || |||||||||||||||||||    
T  1293386 cagtttactgccgaagggcattttcgtaaagtatttatgtggcacaaccaaagcaaatgtgggaacagcaattct 1293312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11095144 - 11095222
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| | ||| |||| ||||||||  |||| |||||||||||||| ||||| |||| | ||||||||| ||||||||    
T  11095144 cggcagctaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaacgtgggaacaacaattctc 11095222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 42165163 - 42165097
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||| |||||  |||||||||||||||||| || || |||||  |||| |||||||||    
T  42165163 ccgaagggcattttcgtaaaatactcgtgtggcacagccttatcaaatgtgtaaacaacaattctct 42165097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 2267025 - 2266964
Alignment:
Q  35 gggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||  |||| ||||||||||| ||| |||| |||| ||||||||||| |||||||||    
T  2267025 gggcatttgagtaatttactcgtgtgacacggccaaaccaaatgtgggaacatcaattctct 2266964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 2950312 - 2950267
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||| |||| ||| || ||||||||||||||||||||||    
T  2950312 ttactcgtgtgacacaaccaaactatatgtgggaacagcaattctc 2950267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 3953309 - 3953350
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  3953309 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 3953350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 8156487 - 8156446
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  8156487 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 8156446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 19750070 - 19750151
Alignment:
Q  14 cggcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||| ||| |||| ||| ||||  |||| ||||||| |||||||||||| |||| | ||||||||| ||||||||    
T  19750070 cggctgcagttaactgccgaggggtatttgagtaatttactcgcgtggcacagccaaaccaaaagtgggaacaacaattctc 19750151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 30943168 - 30943127
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  30943168 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 30943127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 1835401 - 1835464
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||| ||||||| ||||  |||||||||||||||| ||| ||   |||||||||||||||||||||    
T  1835401 ccgaaaggcattttcgtattttactcgtgtggcacaaccaaac---atgtgggaacagcaattctct 1835464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3948744 - 3948776
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3948744 gtttttaggaaaccggcggcagttaactaccga 3948776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 11248537 - 11248489
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| ||||| ||||| |||| ||||||||||| |||||||||||    
T  11248537 ttactcgtatggcatagccaaaccaaatgtgggaacatcaattctctta 11248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 30947711 - 30947679
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  30947711 gtttttaggaaaccggcggcagttaactaccga 30947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 4e-32; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 44100714 - 44100636
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  44100714 cggcagtttactaccgaagggcatttccgtaacttactcatgtggcacagccataccatatgtgagaacagcaattctc 44100636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 22003462 - 22003537
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 92  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||| |||||||||||||||||    
T  22003462 cggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaatt 22003537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 39800713 - 39800797
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||| ||| |||||||||||||   ||  ||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  39800713 cggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctctcaaaa 39800797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 42505823 - 42505903
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| |||||||| ||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42505823 cggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctctt 42505903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 45428626 - 45428550
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||| |||||||||  ||||||||||| ||||||||||  ||||||||||||| ||||||||    
T  45428626 gcagtttactaccgaagggtatttccgtattttactcgtgtgacacagccatattatatgtgggaacaacaattctc 45428550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 30497010 - 30497089
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  30497010 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 30497089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 20937910 - 20937832
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  20937910 cggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 20937832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 39793975 - 39793897
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||   ||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  39793975 cggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 39793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 43619203 - 43619281
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||   ||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  43619203 cggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 43619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 43978548 - 43978474
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||    
T  43978548 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaat 43978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 17420567 - 17420502
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17420567 ccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 17420502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 39947609 - 39947528
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||||||||||||| |||| |||||  ||||||||||||||||| | |||| ||||||||||| |||||||| |||||    
T  39947609 cagtttactaccgaagggtattttcgtaaagtactcgtgtggcacagcaaaaccaaatgtgggaacaacaattctcataaaa 39947528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 38945752 - 38945696
Alignment:
Q  39 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  38945752 atttgcgtaaattactcgtgtggcacagccatactatatgtgggaacagcaattctc 38945696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 30493358 - 30493291
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||||    
T  30493358 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaagatgtgggaacagcaattctctt 30493291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 43312744 - 43312665
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||| ||||||||||||| |||||  || |||||||| ||||||| |||| ||||||||||| |||||||||    
T  43312744 cggcagtttactgccgaagggcattttcgtaaaatattcgtgtggtacagccaaaccaaatgtgggaacaacaattctct 43312665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 3940790 - 3940864
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| ||||    
T  3940790 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaat 3940864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 5355605 - 5355671
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | |||||||||||||||||||||    
T  5355605 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctct 5355671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 10424852 - 10424774
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| | || ||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  10424852 cggcagttaactgctgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 10424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 15831135 - 15831061
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||||||| |||| ||||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  15831135 agttaactgccgaagggaattttcgtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 15831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 20951106 - 20951184
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| ||||| ||||||||||||| || || ||||||||||||||||||||    
T  20951106 cggcagttaactgccgaagggcatttaggtaatttactggtgtggcacagccttatcacatgtgggaacagcaattctc 20951184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 28468653 - 28468575
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||||| |||| ||||  |||||||||||||||||||| || ||| ||||||||| ||||||||    
T  28468653 cggcagtttactatcgaagggtatttgcgtattttactcgtgtggcacagccaaactatacgtgggaacaacaattctc 28468575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 21998217 - 21998148
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||  |||| |||||||||||||||| ||| || ||||||||||||| ||||||||    
T  21998217 actaccgaagggcatttgagtaatttactcgtgtggcacaaccaaactatatgtgggaacatcaattctc 21998148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 26543313 - 26543238
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||| | ||||||| ||||| |||||  ||||||||||||||||||| |||| ||||||||||| ||||||||    
T  26543313 cagtttagtgccgaaggacattttcgtaaagtactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 26543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29074063 - 29074142
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||| ||||||||  |||| |||||||||||||||| ||| |||| ||||||||||| |||||||||    
T  29074063 cggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtgggaacaacaattctct 29074142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 213513 - 213587
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  213513 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 213587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 10624526 - 10624600
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  10624526 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 10624600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 95
Target Start/End: Complemental strand, 42499749 - 42499687
Alignment:
Q  33 aagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||  |||  |||||||||||||||||||| || ||||||||||||||||||||||    
T  42499749 aagggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 42499687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 41560065 - 41559984
Alignment:
Q  6 taggaaaccggcggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaaca 86  Q
    ||||||||||||||||||| ||| |||| | || |||| ||||| ||||| ||||||||||||||||  |||||||||||||    
T  41560065 taggaaaccggcggcagttaactgccgagaaggtatttgcgtaaattactggtgtggcacagccatagtatatgtgggaaca 41559984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 17426492 - 17426540
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||||    
T  17426492 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctctta 17426540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 30803078 - 30803158
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| |||| || |||||  |||| |||||||||||||||||||| |||| ||||||||||| ||||| ||||    
T  30803078 cggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattttctt 30803158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 95
Target Start/End: Original strand, 39951212 - 39951288
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||| |||| | ||||||  |||| ||||||||||| |||||||| |||| ||||||||||||||||||||    
T  39951212 gcagttaactgccgaggagcatttgagtaatttactcgtgtgacacagccaaaccaaatgtgggaacagcaattctc 39951288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 5351976 - 5351897
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagc-cataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| | |||||||||||  |||  |||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  5351976 cggcagttaactgcagaagggcattttggtattttactcgtgtggcacagcgcatactatatgtgggaacaacaattctc 5351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 43536081 - 43536034
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | ||||||||||||||||||||||    
T  43536081 ttactcgtgtggcacagccaaacaagatgtgggaacagcaattctctt 43536034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 18003333 - 18003407
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| || |||||||||||||| |||||||||||||||||    
T  18003333 cggcagttaactgccgagagggtatttgcgtaaattactggtttggcacagccatactatatgtgggaacagcaa 18003407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 28419420 - 28419342
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  ||||  |||||||||||||||||| || || |||||  |||||||||||||    
T  28419420 cggcagttaactgccgaagggcatttaggtaaaatactcgtgtggcacagccttatcaaatgtgtaaacagcaattctc 28419342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 3935809 - 3935768
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  3935809 ttactcgtgtggcacagccaaactatatgtgggaacagcaat 3935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 7267525 - 7267586
Alignment:
Q  37 gcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||| ||||  |||||||||||||||||||| || | |||||| ||||||||||||||||    
T  7267525 gcattttcgtattttactcgtgtggcacagccaaacaacatgtggaaacagcaattctctta 7267586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 36509977 - 36509900
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||||||| |||| || |||||  |||| ||||||||||| || ||||| |||| ||||||||||| |||||||||||    
T  36509977 agtttactgccgagggacatttgagtaatttactcgtgtgacatagccaaaccaaatgtgggaacaacaattctctta 36509900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 26328010 - 26328066
Alignment:
Q  201 acatggctgaatcatttgtgtttgatattgctgattcactgcttggaaagcttgctt 257  Q
    ||||||| || |||||| | |||||||||||||||||||| |||| |||||||||||    
T  26328010 acatggcagattcatttctctttgatattgctgattcactccttgaaaagcttgctt 26328066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 36510916 - 36510996
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| |||| ||| ||||  |||| ||||||||||| |||||||| |||| | ||||||||| ||||||||||    
T  36510916 cggcagttaactgccgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaaagtgggaacaacaattctctt 36510996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 85
Target Start/End: Complemental strand, 39489196 - 39489128
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaac 85  Q
    |||||||| ||| |||||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||    
T  39489196 cggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaac 39489128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 5334566 - 5334515
Alignment:
Q  39 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||| ||||| ||||| ||||||||||||| ||| |||||||||||||||||    
T  5334566 atttgcgtaaattactggtgtggcacagccctactatatgtgggaacagcaa 5334515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 5351826 - 5351873
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||    
T  5351826 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactctt 5351873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 97
Target Start/End: Complemental strand, 24749665 - 24749618
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||||    
T  24749665 ttactagtgtggcacagccttatcacatgtgggaacagcaattctctt 24749618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Original strand, 15835305 - 15835351
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||||| || | ||||||||||| |||||||||    
T  15835305 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctct 15835351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 39033083 - 39033033
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||||||||||| ||||||| |||| ||||||||||| ||||||||    
T  39033083 gtaatttactcgtgtggtacagccaaaccaaatgtgggaacaacaattctc 39033033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 41273308 - 41273362
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccata 71  Q
    |||||||| ||| ||||||||||||| | |||  |||||||||||||||||||||    
T  41273308 cggcagttaactgccgaagggcattttcataaagtactcgtgtggcacagccata 41273362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 208989 - 208948
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  208989 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 208948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 43539800 - 43539873
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 92  Q
    |||||| ||| ||||||| ||||| || |  ||||| |||||||||| |||||| ||||||||||||| |||||    
T  43539800 gcagttaactgccgaaggacattttcgcattttactggtgtggcacaaccatactatatgtgggaacaacaatt 43539873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 43984428 - 43984469
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||| ||||||||||||| || ||||||||||||||||||    
T  43984428 ttactcatgtggcacagccaaactatatgtgggaacagcaat 43984469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 44100892 - 44100937
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||||||||| ||||||||    
T  44100892 ttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 44100937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 213510 - 213478
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  213510 gtttttaggaaaccggcggcagttaactaccga 213478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 3086021 - 3085969
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||| |||||||||||||||| ||| || | ||||||||||| ||||||||||    
T  3086021 gtaatttactcgtgtggcacaaccaaactaaatgtgggaacaacaattctctt 3085969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 10624523 - 10624491
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  10624523 gtttttaggaaaccggcggcagttaactaccga 10624491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 18003330 - 18003298
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  18003330 gtttttaggaaaccggcggcagttaactaccga 18003298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 26712060 - 26711983
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  26712060 cggcagtttactaccgaagggcatttccgtaacttactcgtttggcacagcc-taccatatgtgggaacagcaattctc 26711983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 27616714 - 27616641
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaata 103  Q
    |||||||||||||  |||  ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  27616714 ccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctcataaaata 27616641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 13382638 - 13382562
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||||||||||||||| |||||  |||| |||||||||||||||||||| |||| ||||||||||| |||||||||    
T  13382638 cagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctct 13382562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 6760932 - 6761010
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| |||||| | ||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  6760932 cggcagttaactaccaaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 6761010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 11688123 - 11688046
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||| ||| |||||||||||||  |||  |||||||||||||||||||||||  |||||||||||| ||||||||||    
T  11688123 cagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactgtatgtgggaacaacaattctctt 11688046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 30829726 - 30829786
Alignment:
Q  31 cgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||| ||||  |||||||||||||||| |||||| ||||||||||||||||||    
T  30829726 cgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacagcaat 30829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 11694154 - 11694199
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  11694154 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 11694199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 1612826 - 1612882
Alignment:
Q  34 agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  1612826 agggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 1612882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 6207167 - 6207233
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||  |||  ||||||||||||||||| || || ||||||||||| |||||||||||    
T  6207167 ccgaagggcattttggtattttactcgtgtggcacagtcaaactatatgtgggaaaagcaattctct 6207233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 32691163 - 32691085
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| |||  ||| |||||||| ||||| ||||| |||||||||| ||| |||| ||||||||||| ||||||||    
T  32691163 cggcagttaactgtcgaggggcatttgcgtaatttacttgtgtggcacaaccaaaccaaatgtgggaacaacaattctc 32691085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 18347031 - 18346974
Alignment:
Q  39 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||| ||||| |||||| ||||||||| |||||| ||||||||||||| |||||||||    
T  18347031 atttgcgtaaattactcatgtggcacaaccatactatatgtgggaacaacaattctct 18346974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 30826029 - 30825984
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  30826029 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 30825984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 27641845 - 27641893
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    ||||| |||||||||||||| || | |||||||||||||||||||||||    
T  27641845 ttactagtgtggcacagccaaacaacatgtgggaacagcaattctctta 27641893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 3501161 - 3501086
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| ||||||||||||| |||||  ||||||||||||| |||| || || |||||  |||||||||||||    
T  3501161 cagttaactgccgaagggcatttacgtaaaatactcgtgtggcagagccttatcaaatgtgtaaacagcaattctc 3501086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 8707976 - 8707917
Alignment:
Q  35 gggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattct 94  Q
    ||||||||  |||| ||||||||||||||| |||| |||| ||||||||||| |||||||    
T  8707976 gggcatttgagtaatttactcgtgtggcacggccaaaccaaatgtgggaacaacaattct 8707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 13164321 - 13164395
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||| ||||||||  |||| |||||||||||||| ||||| || | ||||||||||| ||||||||    
T  13164321 agttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaactaaatgtgggaacaacaattctc 13164395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 17597594 - 17597667
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaa 99  Q
    ||||||||||  |||||  |||| |||||||||||| ||||  | || ||||||||||||| ||||||||||||    
T  17597594 actaccgaagaacatttgagtaatttactcgtgtggtacagttaaactatatgtgggaacatcaattctcttaa 17597667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 18351737 - 18351782
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||| ||||||||||||||    
T  18351737 ttactcgtgtggcacagccaaacaacatgtgagaacagcaattctc 18351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 27659952 - 27659874
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||||||||||||    
T  27659952 cggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 27659874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 11027107 - 11027028
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| |||||||||    
T  11027107 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctct 11027028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 8574694 - 8574617
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||||||  |||| |||||||||| ||||||||| |||| ||||||||||| ||||||||    
T  8574694 cggcagtttactaccgaagggcatttgagtaatttactcgtgt-gcacagccaaaccaaatgtgggaacaacaattctc 8574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13837736 - 13837658
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||| |||||||||||||  ||||  ||||||||||||||||||| | || ||||||||||||||||||||    
T  13837736 cggcagtttactgccgaagggcatttttgtaaagtactcgtgtggcacagccaaagcaaatgtgggaacagcaattctc 13837658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 11033523 - 11033602
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| ||||||| |||||  |||  |||||| |||||||||||||||| |||||||||||||||||||||||    
T  11033523 cggcagttaactgccgaaggacattttggtattttactcatgtggcacagccatactatatgtgggaacagcaattctct 11033602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 8580549 - 8580619
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||||||||  |||| |||||||||||||||||| | || ||||||||||| |||||||||||    
T  8580549 actaccgaagggcatttgagtaatttactcgtgtggcacagctaaactatatgtgggaatagcaattctct 8580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 19041211 - 19041256
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19041211 ttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19041256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 38860242 - 38860307
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  38860242 ccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 38860307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 28238138 - 28238071
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||| ||||||||||||    
T  28238138 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaagagcaattctctt 28238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 28241860 - 28241938
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||   ||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  28241860 cggcagttaactgccgaagggtattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 28241938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 38853491 - 38853413
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| |||| || ||||| ||||||||    
T  38853491 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatatgagaacaacaattctc 38853413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 14279844 - 14279788
Alignment:
Q  34 agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  14279844 agggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 14279788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 37820930 - 37820986
Alignment:
Q  39 atttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||||| |||||||||||||||| |||||| ||||||||||||| ||||||||    
T  37820930 atttgcgtaatttactcgtgtggcacaaccatactatatgtgggaacaacaattctc 37820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 28876642 - 28876575
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||| ||||| ||||    
T  28876642 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattttctt 28876575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 19035184 - 19035139
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||||||| || || ||||||||||||||||||||||    
T  19035184 ttactcgtgtggcacagtcaaactatatgtgggaacagcaattctc 19035139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 28886454 - 28886523
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaaca 86  Q
    |||||||| | | ||||||||||||   || | ||||||||||||||||||||||| |||||||||||||    
T  28886454 cggcagttaattgccgaagggcattaaggtcatttactcgtgtggcacagccatactatatgtgggaaca 28886523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 37814561 - 37814516
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  37814561 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 37814516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 3891496 - 3891412
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaa 101  Q
    |||||||| ||| |||| ||| ||||  |||| |||||||||||||||||||| |  | | |||||||||||||||||| |||||    
T  3891496 cggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaaagtgggaacagcaattctcctaaaa 3891412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 42912947 - 42913018
Alignment:
Q  26 actaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||||||||||||   |||  |||||||||||||||||| || || |||||  |||||||||||||||    
T  42912947 actaccgaagggcatttaaataaaatactcgtgtggcacagccttatcaaatgtgtaaacagcaattctctt 42913018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 5789 - 5715
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||| ||| |||| |||| |||  |||| |||||||||||||||||| | |||| ||||||||||| ||||    
T  5789 cggcagttaactgccgaggggcgtttgagtaatttactcgtgtggcacagctaaaccaaatgtgggaacaacaat 5715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 14723 - 14801
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||||| |||||  |||| |||||||||||||||| || || || |||||  |||||||||||||    
T  14723 cggcagttaactgccgaaggacatttgagtaatttactcgtgtggcacaaccttatcaaatgtgtaaacagcaattctc 14801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 3892497 - 3892575
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| || |||||  |||| |||||||||||||| | ||| |||| ||||||||||| ||||||||    
T  3892497 cggcagttaactgccgagggacatttgagtaatttactcgtgtggcataaccaaaccaaatgtgggaacaacaattctc 3892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 30705149 - 30705069
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| | ||||||||||| ||||| | ||||||||||||||||| ||  | |||||  |||| ||||||||||    
T  30705149 cggcagttaactgctgaagggcatttacgtaaatgactcgtgtggcacagccttatgaaatgtgtaaacaacaattctctt 30705069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 38407184 - 38407128
Alignment:
Q  44 cgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaa 100  Q
    ||||| ||||||||||| |||| || || || ||||||||||| |||||||||||||    
T  38407184 cgtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaattctcttaaa 38407128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 783 - 858
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaatt 92  Q
    |||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||||||| |||||    
T  783 cggcagtttactaccgaagggcatttccgtattttactcatgtggcacagccatactatatgtgggaacaacaatt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 19924767 - 19924689
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  19924767 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 19924689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 3732414 - 3732492
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||| |||||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  3732414 cggcagttaactgccgaatggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 13629416 - 13629338
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  |||||||||||||||| |||||| ||||||||||||||||||||||    
T  13629416 cggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaattctc 13629338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 38633214 - 38633292
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| |||| |||||||  |||| |||||||||||||||||||| || ||||||||||||| ||||||||    
T  38633214 cggcagtttactatcgaaaggcatttgagtaatttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 38633292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 586665 - 586745
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||||| ||| |||||||| ||||  |||| |||||||||||||||||||| |||| | ||||||||||||||||||||    
T  586665 cggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacagcaattctctt 586745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 30890071 - 30889995
Alignment:
Q  19 gcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||| ||| |||||||||||||  |||  ||||||||||||||||||||||| ||||||||||||| ||||||||    
T  30890071 gcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 30889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 44621179 - 44621259
Alignment:
Q  18 ggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    ||||||| ||| ||||||||||||| ||||  |||||||||||||||| |||||| ||| ||||||||| |||||||||||    
T  44621179 ggcagttaactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatacgtgggaacaacaattctctta 44621259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 8473791 - 8473717
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| ||||||||||||| ||||  |||||||||||||||| |||||| |||||||||||||| |||||||    
T  8473791 agttaactgccgaagggcattttcgtattttactcgtgtggcacatccatactatatgtgggaacagtaattctc 8473717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 8548743 - 8548808
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||    
T  8548743 ccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 8548808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 26879369 - 26879434
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  26879369 ccgaagggcattttcgtattttactggtgtggcacagccatactatatgtgggaacaacaattctc 26879434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 97
Target Start/End: Complemental strand, 3728734 - 3728667
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctt 97  Q
    |||||| |||||| ||||  |||||||||||||||||||| || | ||||||||||||||||||||||    
T  3728734 ccgaagagcattttcgtattttactcgtgtggcacagccaaacaagatgtgggaacagcaattctctt 3728667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 30195447 - 30195522
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| |||||||||||||  |||| |||||||||||||| ||||| |||| ||||||||||| ||||||||    
T  30195447 cagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 30195522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 2365247 - 2365169
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  || | |||||||||||||||||||| ||||  |||||||||| ||||||||    
T  2365247 cggcagttaactgccgaagggcatttaggtcatttactcgtgtggcacagccaaaccaattgtgggaacaacaattctc 2365169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 3983099 - 3983025
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  3983099 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 3983025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 26875705 - 26875627
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||  ||||| ||||||||||||||||| ||| ||||||| ||||||||||    
T  26875705 cggcagttaactgccgaagggcatttttgtattttactggtgtggcacagccatactatacgtgggaatagcaattctc 26875627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 31945922 - 31945996
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  31945922 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 31945996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 38776187 - 38776261
Alignment:
Q  17 cggcagtttactaccga-agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||||||| ||| |||| |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  38776187 cggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 38776261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 43012709 - 43012783
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||||| |||||||  |||| |||||||||||||| ||||| |||| ||||||||| ||||||||||    
T  43012709 agtttactgccgaaaggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaagagcaattctc 43012783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 20349452 - 20349396
Alignment:
Q  34 agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  20349452 agggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 20349396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 585667 - 585589
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| | | |||||||||||||  |||| |||||| ||||||| ||||| || | ||||||||||||||||||||    
T  585667 cggcagttaattgccgaagggcatttgggtaaattactcctgtggcatagccaaactaaatgtgggaacagcaattctc 585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 19161905 - 19161827
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| ||||| |||||||  |||| |||||| ||||||||||||| |||| ||||||||| || |||||||    
T  19161905 cggcagttaactgccgaaaggcatttgagtaatttactcttgtggcacagccaaaccaaatgtgggaatagtaattctc 19161827  T

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Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 19914475 - 19914401
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||| ||||||||  |||| |||||||||||||||||||| || | ||||||||||| ||||||||    
T  19914475 agttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 19914401  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 22397832 - 22397754
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||  |||  ||||||||||||||||||| ||| ||| ||||||||| ||||||||    
T  22397832 cggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccttactatacgtgggaacaacaattctc 22397754  T

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Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 22528658 - 22528736
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||| ||||  |||| |||||||||||| |||||||  ||| ||||||||||| ||||||||    
T  22528658 cggcagttaactgccgaagggaatttaggtaaattactcgtgtggtacagccaatccaaatgtgggaacatcaattctc 22528736  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 43011840 - 43011762
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| ||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| ||||||||    
T  43011840 cggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctc 43011762  T

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Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 47652740 - 47652662
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||| || |||||  |||| ||||||||||| |||||||| |||| | ||||||||||||||||||    
T  47652740 cggcagttaactgccgagggacatttgagtaatttactcgtgtgacacagccaaaccaaacgtgggaacagcaattctc 47652662  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 4883218 - 4883165
Alignment:
Q  45 gtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctctta 98  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| |||||||||||    
T  4883218 gtaatttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctctta 4883165  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 19928939 - 19928984
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || | ||||||||||||||||||||    
T  19928939 ttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 19928984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 38632504 - 38632452
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagcca 69  Q
    |||||||| |||||||||||||||||  |||| |||||| |||||||||||||    
T  38632504 cggcagttaactaccgaagggcatttgagtaatttactcctgtggcacagcca 38632452  T

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Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 100
Target Start/End: Original strand, 3993937 - 3993987
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaa 100  Q
    |||||||||||||||||||| || | |||||||||||||||| ||| ||||    
T  3993937 ttactcgtgtggcacagccaaacaacatgtgggaacagcaatactcataaa 3993987  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 15051422 - 15051487
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||||||||| |||| ||| || | ||||||||| ||||||||||    
T  15051422 ccgaagggcattttcgtattttactcgtgtgacacaaccaaacaacatgtgggaagagcaattctc 15051487  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 20354029 - 20354070
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  20354029 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20354070  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 20556877 - 20556836
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  20556877 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 30905750 - 30905705
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  30905750 ttactggtgtggcacagccttatcacatgtgggaacagcaattctc 30905705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 38771608 - 38771567
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaat 91  Q
    |||||||||||||||||||| || | ||||||||||||||||    
T  38771608 ttactcgtgtggcacagccaaacaacatgtgggaacagcaat 38771567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 3983102 - 3983134
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3983102 gtttttaggaaaccggcggcagttaactaccga 3983134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 102
Target Start/End: Complemental strand, 27649256 - 27649184
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctcttaaaat 102  Q
    |||| ||||||||| |||| ||||| ||||| ||||||||   ||||||||  |||| |||||||||||||||    
T  27649256 ccgaggggcatttcggtaaattactagtgtgacacagccaatgcatatgtgtcaacaacaattctcttaaaat 27649184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 31945919 - 31945887
Alignment:
Q  1 gtttttaggaaaccggcggcagtttactaccga 33  Q
    |||||||||||||||||||||||| ||||||||    
T  31945919 gtttttaggaaaccggcggcagttaactaccga 31945887  T

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Target: scaffold0634 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 7430 - 7351
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||||||| ||||||||||||| |||||  |||||||||| |||||||| |||| ||||||||||| |||||||||    
T  7430 cggcagtttactgccgaagggcattttcgtaaagtactcgtgtgtcacagccaaaccagatgtgggaacaacaattctct 7351  T

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Target: scaffold0494 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11514 - 11592
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| ||| |||||||||||||  |||| |||||||||||||||||||| |||| ||||||||||| ||||||||    
T  11514 cggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatgtgggaacaacaattctc 11592  T

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Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 96
Target Start/End: Complemental strand, 810 - 764
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    ||||| ||||||||||||| || || |||||||||||||||||||||    
T  810 ttactggtgtggcacagccttatcacatgtgggaacagcaattctct 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 41121 - 41195
Alignment:
Q  21 agtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| ||| |||||||| ||||  |||  ||||||||||||||||||||||| ||||||||||||||||||||||    
T  41121 agttaactgccgaagggtattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctc 41195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 496 - 561
Alignment:
Q  30 ccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||||||||||| ||||  ||||| |||||||||| |||||| ||||||||||||| ||||||||    
T  496 ccgaagggcattttcgtattttactggtgtggcacaaccatactatatgtgggaacaacaattctc 561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 236 - 297
Alignment:
Q  35 gggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||||| ||||| |||||||||||||| |||| ||||||||||| |||||||||    
T  236 gggcatttgcgtaatttacttgtgtggcacagccaaaccaaatgtgggaacaacaattctct 297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 84526 - 84481
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || ||||||||||||||||||||||    
T  84526 ttactcgtgtggcacagccaaactatatgtgggaacagcaattctc 84481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 11775 - 11719
Alignment:
Q  34 agggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaa 90  Q
    |||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  11775 agggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaacagcaa 11719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 69281 - 69360
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctct 96  Q
    |||||||| ||| |||| ||| ||||  |||| |||||||||||||||||||| |||| | ||||||||| |||||||||    
T  69281 cggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctct 69360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 68404 - 68349
Alignment:
Q  40 tttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||| |||| |||||| ||||||| ||||| |||| ||||||||||||||||||||    
T  68404 tttcagtaatttactcatgtggcatagccaaaccaaatgtgggaacagcaattctc 68349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 10665 - 10587
Alignment:
Q  17 cggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||| | | |||||||||||||  |||| ||||||||||| |||| ||| |||| ||||||||||| ||||||||    
T  10665 cggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaaatgtgggaacaacaattctc 10587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 55 - 100
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||    
T  55 ttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 15685 - 15760
Alignment:
Q  20 cagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||| ||||||| ||||| |||||  ||||||||||||||| ||| |||| |||||| |||| ||||||||    
T  15685 cagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaaatgtggaaacaccaattctc 15760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 11280 - 11235
Alignment:
Q  50 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 95  Q
    ||||| ||||||||||||| || || ||||||||||||||||||||    
T  11280 ttactagtgtggcacagccttatcaaatgtgggaacagcaattctc 11235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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