View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19105_high_18 (Length: 291)
Name: NF19105_high_18
Description: NF19105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19105_high_18 |
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Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 275
Target Start/End: Complemental strand, 32264431 - 32264157
Alignment:
| Q |
1 |
tatactactagcctctgcactatcatgtggattcaacatacacataagaacagaactgtaaggtttgtggaatcattacaattagataatgctagctact |
100 |
Q |
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||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32264431 |
tatactactagcctctgcaatatcatgtggactcaatatacacataagaacagaactgtaaggtttgtggaatcattacaattagataatgctagctact |
32264332 |
T |
|
| Q |
101 |
atacgaggattgcaaaaagatttttcgatgaggaattaaattaagattcgactagaannnnnnnggagtacatacataatacaagttcaattgggcctgc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
32264331 |
atacgaggattgcaaaaagatttttcgatgaggaattaaattaagattcgactagaatttttttggagtacatacataatacaagttcaattgggcctgc |
32264232 |
T |
|
| Q |
201 |
cactgtcattatctatagtcatgtataacgattctctttccttatacataatgtgaaattaaaattggaagaaga |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32264231 |
cactgtcattatctatagtcatgtataacgattctctttccttatacataatgtgaaattaaaattggaagaaga |
32264157 |
T |
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