View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19105_low_20 (Length: 278)

Name: NF19105_low_20
Description: NF19105
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19105_low_20
NF19105_low_20
[»] chr6 (28 HSPs)
chr6 (17-263)||(19165195-19165430)
chr6 (186-242)||(26878802-26878858)
chr6 (195-243)||(9438313-9438361)
chr6 (176-224)||(18991476-18991524)
chr6 (176-224)||(22389805-22389853)
chr6 (186-264)||(15288969-15289048)
chr6 (178-221)||(34365729-34365772)
chr6 (178-224)||(9491790-9491836)
chr6 (178-224)||(12089091-12089137)
chr6 (195-241)||(24623533-24623579)
chr6 (179-224)||(19642602-19642647)
chr6 (179-224)||(30566053-30566098)
chr6 (179-224)||(34396078-34396123)
chr6 (186-224)||(5288400-5288438)
chr6 (178-224)||(10377179-10377225)
chr6 (186-224)||(12127964-12128002)
chr6 (186-224)||(22501020-22501058)
chr6 (186-224)||(31741518-31741556)
chr6 (179-220)||(7563635-7563676)
chr6 (178-243)||(12291164-12291229)
chr6 (195-224)||(18244067-18244096)
chr6 (195-224)||(18904738-18904767)
chr6 (195-224)||(20716447-20716476)
chr6 (179-224)||(32057029-32057074)
chr6 (179-223)||(8233081-8233125)
chr6 (179-243)||(10373590-10373654)
chr6 (176-224)||(11982754-11982802)
chr6 (179-223)||(34521988-34522032)
[»] chr1 (37 HSPs)
chr1 (179-263)||(20357455-20357539)
chr1 (179-263)||(20562416-20562500)
chr1 (178-243)||(23930580-23930645)
chr1 (177-263)||(15774327-15774414)
chr1 (186-263)||(749602-749679)
chr1 (186-243)||(4429518-4429575)
chr1 (195-243)||(11802056-11802104)
chr1 (177-224)||(23464041-23464088)
chr1 (197-248)||(36164675-36164726)
chr1 (177-224)||(37490883-37490930)
chr1 (178-224)||(538384-538430)
chr1 (178-224)||(18923940-18923986)
chr1 (186-263)||(49251410-49251488)
chr1 (179-224)||(38020003-38020048)
chr1 (195-243)||(16110056-16110104)
chr1 (177-224)||(4354160-4354207)
chr1 (177-224)||(5172657-5172704)
chr1 (181-224)||(29442022-29442065)
chr1 (179-242)||(49010737-49010800)
chr1 (179-242)||(49916435-49916498)
chr1 (189-243)||(7182930-7182984)
chr1 (178-220)||(9408673-9408715)
chr1 (195-264)||(15368816-15368886)
chr1 (186-224)||(19793528-19793566)
chr1 (178-224)||(29331219-29331265)
chr1 (178-224)||(42831941-42831987)
chr1 (186-224)||(43555929-43555967)
chr1 (195-264)||(48110540-48110610)
chr1 (179-224)||(3533028-3533073)
chr1 (179-263)||(12073092-12073177)
chr1 (179-224)||(21884570-21884615)
chr1 (179-224)||(24661977-24662022)
chr1 (195-224)||(37733766-37733795)
chr1 (195-224)||(38851646-38851675)
chr1 (178-243)||(46116210-46116275)
chr1 (199-243)||(8865213-8865257)
chr1 (195-231)||(15051558-15051594)
[»] chr8 (29 HSPs)
chr8 (179-243)||(25119203-25119267)
chr8 (186-263)||(26703905-26703983)
chr8 (177-242)||(41225701-41225767)
chr8 (176-224)||(13762567-13762615)
chr8 (176-224)||(40249935-40249983)
chr8 (176-224)||(42688048-42688096)
chr8 (182-264)||(8740670-8740753)
chr8 (177-224)||(9524950-9524997)
chr8 (185-243)||(6978821-6978879)
chr8 (178-224)||(23857379-23857425)
chr8 (186-263)||(43874992-43875070)
chr8 (179-224)||(2376513-2376558)
chr8 (179-224)||(15042420-15042465)
chr8 (195-263)||(24074517-24074586)
chr8 (179-224)||(24608538-24608583)
chr8 (179-224)||(28465613-28465658)
chr8 (179-224)||(29108657-29108702)
chr8 (179-224)||(39484425-39484470)
chr8 (178-247)||(41089182-41089251)
chr8 (179-263)||(43468720-43468805)
chr8 (172-224)||(17980270-17980322)
chr8 (179-243)||(35556422-35556486)
chr8 (177-224)||(7649522-7649569)
chr8 (177-224)||(43847695-43847742)
chr8 (178-224)||(34073294-34073340)
chr8 (186-243)||(5184923-5184980)
chr8 (178-243)||(8682375-8682440)
chr8 (178-223)||(9737416-9737461)
chr8 (178-223)||(25689503-25689548)
[»] chr7 (37 HSPs)
chr7 (176-231)||(49012390-49012445)
chr7 (177-224)||(38778734-38778781)
chr7 (186-263)||(47552215-47552293)
chr7 (178-223)||(8195909-8195954)
chr7 (179-224)||(46337923-46337968)
chr7 (177-224)||(30644162-30644209)
chr7 (177-224)||(36316029-36316076)
chr7 (177-243)||(2366350-2366416)
chr7 (186-224)||(4590661-4590699)
chr7 (178-224)||(7263053-7263099)
chr7 (186-224)||(14967689-14967727)
chr7 (186-224)||(15397165-15397203)
chr7 (186-224)||(22047522-22047560)
chr7 (186-224)||(27047770-27047808)
chr7 (186-224)||(34962027-34962065)
chr7 (186-224)||(46716335-46716373)
chr7 (178-231)||(4104474-4104527)
chr7 (195-224)||(4818031-4818060)
chr7 (195-224)||(21086115-21086144)
chr7 (179-224)||(22741198-22741243)
chr7 (179-224)||(22966013-22966058)
chr7 (179-224)||(25818281-25818326)
chr7 (195-224)||(27907951-27907980)
chr7 (195-224)||(29710155-29710184)
chr7 (195-248)||(30152752-30152805)
chr7 (195-224)||(31279361-31279390)
chr7 (179-224)||(34948101-34948146)
chr7 (195-224)||(36176882-36176911)
chr7 (178-243)||(42887148-42887213)
chr7 (179-224)||(43970908-43970953)
chr7 (179-224)||(44437880-44437925)
chr7 (179-224)||(45198153-45198198)
chr7 (195-243)||(924328-924376)
chr7 (179-223)||(21925470-21925514)
chr7 (179-223)||(25087006-25087050)
chr7 (203-243)||(30699821-30699861)
chr7 (195-243)||(35368407-35368455)
[»] chr4 (42 HSPs)
chr4 (176-243)||(9924848-9924915)
chr4 (177-243)||(9172407-9172473)
chr4 (179-243)||(13211388-13211452)
chr4 (179-243)||(50657875-50657939)
chr4 (174-224)||(20753180-20753230)
chr4 (186-263)||(34773698-34773776)
chr4 (178-224)||(46482872-46482918)
chr4 (178-224)||(47018001-47018047)
chr4 (175-224)||(44074845-44074893)
chr4 (177-224)||(4722519-4722566)
chr4 (176-243)||(43142495-43142562)
chr4 (177-224)||(46735024-46735071)
chr4 (186-224)||(32885690-32885728)
chr4 (186-224)||(35031385-35031423)
chr4 (178-224)||(50783489-50783535)
chr4 (186-224)||(52608622-52608660)
chr4 (178-224)||(52743222-52743268)
chr4 (178-224)||(53291436-53291482)
chr4 (179-224)||(548942-548987)
chr4 (195-224)||(3442854-3442883)
chr4 (195-224)||(3465594-3465623)
chr4 (195-224)||(3544487-3544516)
chr4 (179-224)||(5430420-5430465)
chr4 (195-224)||(6053991-6054020)
chr4 (179-224)||(9285714-9285759)
chr4 (177-222)||(17859771-17859816)
chr4 (177-242)||(20181204-20181269)
chr4 (179-224)||(24234129-24234174)
chr4 (186-243)||(26203823-26203880)
chr4 (179-224)||(33944418-33944463)
chr4 (195-224)||(40200811-40200840)
chr4 (179-224)||(43115263-43115308)
chr4 (195-224)||(51077878-51077907)
chr4 (179-224)||(56546504-56546549)
chr4 (196-224)||(6365336-6365364)
chr4 (195-243)||(16201307-16201355)
chr4 (196-224)||(35333043-35333071)
chr4 (180-224)||(35909218-35909262)
chr4 (181-263)||(40150469-40150553)
chr4 (180-224)||(52560760-52560804)
chr4 (180-224)||(55266490-55266534)
chr4 (186-242)||(55345766-55345822)
[»] chr3 (39 HSPs)
chr3 (177-263)||(33206750-33206837)
chr3 (179-241)||(50720417-50720479)
chr3 (179-241)||(50792369-50792431)
chr3 (195-243)||(13540000-13540048)
chr3 (195-243)||(29507228-29507276)
chr3 (176-243)||(43566832-43566899)
chr3 (177-243)||(34136756-34136822)
chr3 (176-242)||(35483261-35483327)
chr3 (186-263)||(48173288-48173366)
chr3 (186-243)||(40786282-40786339)
chr3 (195-263)||(49146095-49146164)
chr3 (179-224)||(49639023-49639068)
chr3 (178-243)||(50724362-50724426)
chr3 (178-243)||(50788422-50788486)
chr3 (187-224)||(53467952-53467989)
chr3 (195-243)||(35849315-35849363)
chr3 (177-224)||(24751315-24751362)
chr3 (177-224)||(42271068-42271115)
chr3 (176-223)||(54983765-54983812)
chr3 (186-224)||(32876171-32876209)
chr3 (186-224)||(34503217-34503255)
chr3 (195-229)||(36727512-36727546)
chr3 (186-224)||(41121873-41121911)
chr3 (178-224)||(45713474-45713520)
chr3 (195-225)||(47062120-47062150)
chr3 (188-242)||(49019187-49019241)
chr3 (179-263)||(16006521-16006606)
chr3 (179-224)||(16278006-16278051)
chr3 (186-263)||(17269334-17269411)
chr3 (179-224)||(17440020-17440065)
chr3 (195-224)||(20244145-20244174)
chr3 (179-224)||(20623832-20623877)
chr3 (195-224)||(21420244-21420273)
chr3 (195-224)||(23820640-23820669)
chr3 (197-229)||(335080-335112)
chr3 (176-224)||(19540333-19540381)
chr3 (199-262)||(26366231-26366295)
chr3 (176-248)||(32508825-32508897)
chr3 (176-224)||(33072282-33072330)
[»] chr5 (35 HSPs)
chr5 (194-243)||(14487571-14487620)
chr5 (179-224)||(29050795-29050840)
chr5 (180-248)||(18872517-18872585)
chr5 (179-224)||(22599990-22600035)
chr5 (179-224)||(33800888-33800933)
chr5 (179-224)||(36888148-36888193)
chr5 (187-224)||(38426815-38426852)
chr5 (176-224)||(9577294-9577342)
chr5 (195-243)||(26169048-26169096)
chr5 (186-230)||(29096357-29096401)
chr5 (186-230)||(29841350-29841394)
chr5 (176-224)||(40339154-40339202)
chr5 (179-242)||(4666483-4666546)
chr5 (177-224)||(20945946-20945993)
chr5 (178-224)||(843423-843469)
chr5 (186-224)||(18478005-18478043)
chr5 (178-224)||(19059059-19059105)
chr5 (194-224)||(22863779-22863809)
chr5 (186-224)||(27440353-27440391)
chr5 (189-223)||(34010540-34010574)
chr5 (195-264)||(42801455-42801525)
chr5 (179-224)||(6614093-6614138)
chr5 (179-224)||(9176841-9176886)
chr5 (195-224)||(20699480-20699509)
chr5 (195-224)||(21017661-21017690)
chr5 (179-224)||(27219618-27219663)
chr5 (195-224)||(29144153-29144182)
chr5 (195-224)||(31934930-31934959)
chr5 (195-224)||(33729789-33729818)
chr5 (195-224)||(42455449-42455478)
chr5 (195-223)||(6671842-6671870)
chr5 (180-224)||(7645157-7645201)
chr5 (195-243)||(20762292-20762340)
chr5 (196-224)||(23648341-23648369)
chr5 (196-224)||(23810203-23810231)
[»] chr2 (39 HSPs)
chr2 (179-263)||(10262734-10262819)
chr2 (195-263)||(22538550-22538619)
chr2 (187-248)||(27495541-27495602)
chr2 (177-224)||(30474250-30474297)
chr2 (186-264)||(36426870-36426949)
chr2 (177-263)||(36520795-36520882)
chr2 (178-224)||(580838-580884)
chr2 (178-263)||(2114450-2114536)
chr2 (177-243)||(3179317-3179383)
chr2 (186-224)||(9791950-9791988)
chr2 (186-248)||(31956868-31956930)
chr2 (179-224)||(15392266-15392311)
chr2 (179-224)||(31564090-31564135)
chr2 (198-243)||(34620532-34620577)
chr2 (182-223)||(42091330-42091371)
chr2 (176-224)||(8234847-8234895)
chr2 (180-224)||(20122530-20122574)
chr2 (178-230)||(33001602-33001654)
chr2 (195-243)||(39726470-39726518)
chr2 (195-226)||(1836599-1836630)
chr2 (178-224)||(14879122-14879168)
chr2 (178-224)||(17154643-17154689)
chr2 (189-239)||(18007254-18007304)
chr2 (186-224)||(22297507-22297545)
chr2 (197-243)||(24034089-24034135)
chr2 (186-224)||(26807139-26807177)
chr2 (186-224)||(36481071-36481109)
chr2 (179-224)||(7086248-7086293)
chr2 (179-224)||(15690089-15690134)
chr2 (195-224)||(16028163-16028192)
chr2 (199-263)||(18386827-18386892)
chr2 (195-224)||(32891292-32891321)
chr2 (195-224)||(32943350-32943379)
chr2 (203-243)||(32891618-32891658)
chr2 (180-244)||(32988346-32988410)
chr2 (179-223)||(33956251-33956295)
chr2 (179-223)||(38402792-38402836)
chr2 (195-223)||(38530251-38530279)
chr2 (195-243)||(44721740-44721788)
[»] scaffold1086 (1 HSPs)
scaffold1086 (179-224)||(2483-2528)
[»] scaffold0334 (1 HSPs)
scaffold0334 (176-224)||(5296-5344)
[»] scaffold0343 (1 HSPs)
scaffold0343 (197-248)||(8573-8624)
[»] scaffold0191 (1 HSPs)
scaffold0191 (185-224)||(16848-16887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (186-224)||(43751-43789)
[»] scaffold0006 (1 HSPs)
scaffold0006 (186-224)||(159016-159054)
[»] scaffold0765 (1 HSPs)
scaffold0765 (187-224)||(747-784)


Alignment Details
Target: chr6 (Bit Score: 160; Significance: 3e-85; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 19165195 - 19165430
Alignment:
Q  17 tggaatgcaacatgtgaaatagttattatttaatattttactggccctcccctcaaaaaattattttactaatcctaatcacatatggctgactataaat 116  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19165195 tggaatgcaacatgtgaaatatttactatttaatattttactggccctcccctcaaaaaattattttactaatcctaatcacatatggctgactataaat 19165294  T
Q  117 ttatttgtggaaataataaattgtttagaagattatcaaatagtgacggataccctgactttgtcccgcgagcatacttcagttggtaggacaatgcatt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||      | |||     ||||||||||||||||||||||    
T  19165295 ttatttgtggaaataataaattgtttagaagattatcaaatagtgacggataccccgacttt------ctagc-----tcagttggtaggacaatgcatt 19165383  T
Q  217 attatatgaaagggttgtggttcgaacaccgacacctaacttattca 263  Q
    |||||||| |  ||||| ||||||||| ||||||||  |||||||||    
T  19165384 attatatgcagaggttggggttcgaaccccgacaccccacttattca 19165430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 26878802 - 26878858
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    ||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||    
T  26878802 gagcataattcagttggtaagacaatgcattattatatgcaggggttgtggttcgaa 26878858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 9438313 - 9438361
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  9438313 tcagttggtaggacaatgcattattatatgcaggggttggggttcgaac 9438361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 18991476 - 18991524
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||  |||||||||| |||||||||||||||||||    
T  18991476 tttgtcccgcgagcatagctcagttggtaagacaatgcattattatatg 18991524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 22389853 - 22389805
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  22389853 tttgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 22389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 15289048 - 15288969
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattcat 264  Q
    ||||||| |||||||||||||||| |||||||||||||| | ||| || ||||||||| || ||||||  ||||||||||    
T  15289048 gagcatagttcagttggtaggacattgcattattatatgtaggggctggggttcgaactccagacaccccacttattcat 15288969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 34365729 - 34365772
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattat 221  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  34365729 tgtcccgtgagcatagttcagttggtaggacaatgcattattat 34365772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 9491836 - 9491790
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  9491836 tgtcccgtgagcataactcagttggtaggacaatgcattattatatg 9491790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 12089091 - 12089137
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  12089091 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 12089137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 24623533 - 24623579
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcga 241  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||    
T  24623533 tcagttggtaggacaatgcattattatatgcaagggtcggggttcga 24623579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 19642647 - 19642602
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  19642647 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 19642602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 30566053 - 30566098
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  30566053 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 30566098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 34396078 - 34396123
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| ||||||| ||||||||||| |||||||||||||||||||    
T  34396078 gtcccgtgagcatagttcagttggtacgacaatgcattattatatg 34396123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 5288438 - 5288400
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  5288438 gagcataactcagttggtaggacaatgcattattatatg 5288400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 10377225 - 10377179
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  10377225 tgtcccgtgagtatagctcagttggtaggacaatgcattattatatg 10377179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 12128002 - 12127964
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  12128002 gagcatagctcagttggtaggacaatgcattattatatg 12127964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 22501020 - 22501058
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  22501020 gagcatagctcagttggtaggacaatgcattattatatg 22501058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 31741556 - 31741518
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  31741556 gagcatagctcagttggtaggacaatgcattattatatg 31741518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 7563676 - 7563635
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattatta 220  Q
    |||||| |||||||  ||||||||||||||||||||||||||    
T  7563676 gtcccgtgagcatagctcagttggtaggacaatgcattatta 7563635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 12291164 - 12291229
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  ||||||| ||| |||||||||||||||||| | |||||| |||| ||||    
T  12291164 tgtcccgtgagcataactcagttgttagaacaatgcattattatatggaggggttgaggttagaac 12291229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 18244096 - 18244067
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  18244096 tcagttggtaggacaatgcattattatatg 18244067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 18904767 - 18904738
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  18904767 tcagttggtaggacaatgcattattatatg 18904738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 20716476 - 20716447
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  20716476 tcagttggtaggacaatgcattattatatg 20716447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 32057029 - 32057074
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||| ||||||||||||||||||||||    
T  32057029 gtcccgtgagcatagctcagttgataggacaatgcattattatatg 32057074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 8233081 - 8233125
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| |||||||  ||||||||||||||||| |||||||||||    
T  8233081 gtcccgtgagcatagctcagttggtaggacaatacattattatat 8233125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 10373590 - 10373654
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| |||||||  | ||||||||| |||||||||||||||||| | |||| | |||||||||    
T  10373590 gtcccgtgagcataacttagttggtagaacaatgcattattatatgcaggggtcggggttcgaac 10373654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 11982754 - 11982802
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| |||||||  ||||||||||| | ||||||||||||||||    
T  11982754 tttgtcccgggagcatagctcagttggtagaataatgcattattatatg 11982802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 34521988 - 34522032
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| ||||||| | ||||||||||||||||| ||||||||||    
T  34521988 gtcccgtgagcatagtccagttggtaggacaatgaattattatat 34522032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 20357455 - 20357539
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccgacacctaacttattca 263  Q
    |||||| |||||||  |||||||||||||||||||||||||||||| | ||| || ||||||||| | |||| ||||||||||||    
T  20357455 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaacccggacaactaacttattca 20357539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 20562500 - 20562416
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccgacacctaacttattca 263  Q
    |||||| |||||||  |||||||||||||||||||||||||||||| | ||| || ||||||||| | |||| ||||||||||||    
T  20562500 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggctggggttcgaacccggacaactaacttattca 20562416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 23930645 - 23930580
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||| | |||| | |||||||||    
T  23930645 tgtcccgtgagcatagttcagttggtaggacaatgcattattatatgcaggggtcggggttcgaac 23930580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 15774414 - 15774327
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  15774414 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattca 15774327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 749679 - 749602
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccgacacctaacttattca 263  Q
    |||||||  ||||||||| | |||||||||||||||||| | |||||| ||||||||| ||||||||  |||||||||    
T  749679 gagcataactcagttggtcgaacaatgcattattatatgtaggggttggggttcgaaccccgacaccccacttattca 749602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 4429575 - 4429518
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||  |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  4429575 gagcatagctcagttggtaggacaatgcattattatatgcaggggttggggttcgaac 4429518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 11802104 - 11802056
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  11802104 tcagttggtaggacaatgcattattatatgtaggggttggggttcgaac 11802056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 23464088 - 23464041
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||    
T  23464088 ttgtcccatgagcatagttcagttggtaggacaatgcattattatatg 23464041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 36164675 - 36164726
Alignment:
Q  197 agttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||| ||||    
T  36164675 agttggtaggataatgcattattatatgtaagggttggggttcgaaccccga 36164726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 37490883 - 37490930
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||    
T  37490883 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatg 37490930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 538430 - 538384
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  538430 tgtcccgtgagcatagttcagttggtagaacaatgcattattatatg 538384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 18923986 - 18923940
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  18923986 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 18923940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 49251488 - 49251410
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||  |||||||||||||||||||||||||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  49251488 gagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattca 49251410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 38020048 - 38020003
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  38020048 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 38020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 16110104 - 16110056
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||||||||||||||||| | |||||| |||||||||    
T  16110104 tcagttgataggacaatgcattattatatgcaggggttgaggttcgaac 16110056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 4354207 - 4354160
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||||    
T  4354207 ttgtcctgtgagcatagctcagttggtaggacaatgcattattatatg 4354160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 5172704 - 5172657
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  5172704 ttgtcccgtgagcatagctcagttgataggacaatgcattattatatg 5172657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 29442065 - 29442022
Alignment:
Q  181 cccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||| |||||||  ||||||||||||||||||||||||||||||    
T  29442065 cccgtgagcatagctcagttggtaggacaatgcattattatatg 29442022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 49010800 - 49010737
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    |||||| |||||||  |||||||||||||||||| ||||||||||| | | |||| ||||||||    
T  49010800 gtcccgtgagcatagctcagttggtaggacaatgtattattatatgcatgagttggggttcgaa 49010737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 49916435 - 49916498
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    |||||| |||||||  ||| |||||||||||||||||||||||||| | |||| | ||||||||    
T  49916435 gtcccgtgagcatagatcaattggtaggacaatgcattattatatgtaggggtcggggttcgaa 49916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 243
Target Start/End: Complemental strand, 7182984 - 7182930
Alignment:
Q  189 catacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||| ||||||| | ||| ||||||||||||||||| |||||||| |||||||||    
T  7182984 cataattcagttagcagggcaatgcattattatatgtaagggttgaggttcgaac 7182930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 9408715 - 9408673
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattatta 220  Q
    ||||||| |||||||  ||||||||||||||||||||||||||    
T  9408715 tgtcccgtgagcatagctcagttggtaggacaatgcattatta 9408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 15368816 - 15368886
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattcat 264  Q
    |||||||||||||||||||||||||||||| | |||  | ||||||||| || ||||||  ||||||||||    
T  15368816 tcagttggtaggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcat 15368886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 19793528 - 19793566
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  19793528 gagcataactcagttggtaggacaatgcattattatatg 19793566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 29331265 - 29331219
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  29331265 tgtcccgtgagcatagcttagttggtaggacaatgcattattatatg 29331219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 42831941 - 42831987
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  42831941 tgtcccgtgagcatagctcagttggtaggacattgcattattatatg 42831987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 43555967 - 43555929
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  43555967 gagcatagctcagttggtaggacaatgcattattatatg 43555929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Original strand, 48110540 - 48110610
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa-caccgacacctaacttattcat 264  Q
    ||||||||||| |||||||||||||||||| | ||||||  ||||||| | | ||||||| ||||||||||    
T  48110540 tcagttggtagaacaatgcattattatatgcaggggttggagttcgaacctcggacacctcacttattcat 48110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 3533073 - 3533028
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||| |||||||||||||||||||||||    
T  3533073 gtcccgtgagcatagctcagttagtaggacaatgcattattatatg 3533028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 12073177 - 12073092
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||| |||||||  ||||||||||||| |||||||||||||||  |||| | | ||||||||| || |||||| || |||||||    
T  12073177 gtcccgtgagcataactcagttggtaggataatgcattattatatctaaggatcgaggttcgaactccggacacccaatttattca 12073092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 21884570 - 21884615
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  21884570 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 21884615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 24661977 - 24662022
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  24661977 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 24662022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 37733766 - 37733795
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  37733766 tcagttggtaggacaatgcattattatatg 37733795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 38851646 - 38851675
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  38851646 tcagttggtaggacaatgcattattatatg 38851675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 46116275 - 46116210
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  | |||||||||||||||||||||| ||||| | ||| || |||||||||    
T  46116275 tgtcccgtgagcatagcttagttggtaggacaatgcattatcatatgcaggggctggggttcgaac 46116210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 8865257 - 8865213
Alignment:
Q  199 ttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||| |||||||||||||||| |||| ||| |||||||||    
T  8865257 ttggtaggataatgcattattatatgcaaggattgaggttcgaac 8865213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 15051558 - 15051594
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggt 231  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  15051558 tcagttggtagaacaatgcattattatatgcaagggt 15051594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 25119203 - 25119267
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| ||||||| |||| |||||||||||||||||||||||||| | |||||| |||||||||    
T  25119203 gtcccgtgagcatagttcaattggtaggacaatgcattattatatgcaggggttggggttcgaac 25119267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 26703983 - 26703905
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccg-acacctaacttattca 263  Q
    |||||||  |||||||||||||||||||||||||||||| |||||| | ||||||||  ||| |||||| |||||||||    
T  26703983 gagcataactcagttggtaggacaatgcattattatatgcaagggtcggggttcgaatcccgaacacctcacttattca 26703905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 242
Target Start/End: Complemental strand, 41225767 - 41225701
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg-aaagggttgtggttcgaa 242  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| || |||||| ||||||||    
T  41225767 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgtaaggggttggggttcgaa 41225701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 13762615 - 13762567
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| | ||||||| |||||||||||||||||||||||||||||||    
T  13762615 tttgtcctgtgagcatagttcagttggtaggacaatgcattattatatg 13762567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 40249983 - 40249935
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  40249983 tttgtcccgtgagcataactcagttggtaggacaatgcattattatatg 40249935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 42688048 - 42688096
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| || ||||||| |||||||||||||||||||||||||||||||    
T  42688048 tttgtctcgtgagcatagttcagttggtaggacaatgcattattatatg 42688096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Complemental strand, 8740753 - 8740670
Alignment:
Q  182 ccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattcat 264  Q
    |||||||||||  |||||||||||||||||||| ||||||||| | ||| || ||||||||| || ||||||  ||||||||||    
T  8740753 ccgcgagcataactcagttggtaggacaatgcagtattatatgcaggggctgaggttcgaactccggacaccctacttattcat 8740670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 9524950 - 9524997
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||    
T  9524950 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 9524997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 6978821 - 6978879
Alignment:
Q  185 cgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||| |||||||| ||||| |||||||||||||||| | |||||| |||||||||    
T  6978821 cgagcataattcagttgataggataatgcattattatatgcaggggttggggttcgaac 6978879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 23857425 - 23857379
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  23857425 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 23857379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 43875070 - 43874992
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||  ||||||| |||||||||||||||||||||| | ||| || |||||||||||| ||||||  |||||||||    
T  43875070 gagcataactcagttgataggacaatgcattattatatgtaggggctgaggttcgaacaccagacaccccacttattca 43874992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 2376513 - 2376558
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||    
T  2376513 gtcccgtgagcatagttcaattggtaggacaatgcattattatatg 2376558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 15042465 - 15042420
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  15042465 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 15042420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 24074517 - 24074586
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa-caccgacacctaacttattca 263  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||||| | | ||||||| |||||||||    
T  24074517 tcagttggtaggacaatgcattattatatgtaggggttgaagttcgaacctcggacacctcacttattca 24074586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 24608583 - 24608538
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  24608583 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 24608538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 28465613 - 28465658
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  28465613 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 28465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 29108657 - 29108702
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  29108657 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 29108702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 39484470 - 39484425
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  39484470 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 39484425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 41089251 - 41089182
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccg 247  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||| | |||| | |||| ||||||||    
T  41089251 tgtcccgcgagtatagcttagttggtaggacaatgcattattatatgcaggggtcggggtttgaacaccg 41089182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 43468805 - 43468720
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||| |||||||  |||||||||||||||||||||| ||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  43468805 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatgtaggggtcggggttcgaactccggacaccccacttattca 43468720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 17980270 - 17980322
Alignment:
Q  172 tgactttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||| |||||||| |||||||  |||||||||||||||| |||||||||||||    
T  17980270 tgacattgtcccgtgagcatagctcagttggtaggacaaagcattattatatg 17980322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 35556486 - 35556422
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| |||||||  | ||||||||||||||||||||| |||||| | |||||| |||||||||    
T  35556486 gtcccgtgagcatagcttagttggtaggacaatgcattagtatatgtaggggttggggttcgaac 35556422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 7649522 - 7649569
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||| ||||||||||||||||||||||||||    
T  7649522 ttgtcccgtgagcatagctcacttggtaggacaatgcattattatatg 7649569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 43847695 - 43847742
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| || |||||||  ||||||||||||||||||||||||||||||    
T  43847695 ttgtctcgtgagcatagctcagttggtaggacaatgcattattatatg 43847742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 34073340 - 34073294
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||| || |||||||||||||| ||||||||||||||||    
T  34073340 tgtcccgtgagcgtagttcagttggtaggataatgcattattatatg 34073294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 5184980 - 5184923
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||  |||||||||||||||||| ||||||||||| | ||| || |||||||||    
T  5184980 gagcatagctcagttggtaggacaatggattattatatgcaggggctggggttcgaac 5184923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 8682375 - 8682440
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  ||||||||||||||||| | |||||||||| | ||||||  ||||||||    
T  8682375 tgtcccgtgagcatagctcagttggtaggacaattctttattatatgcaggggttggagttcgaac 8682440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 9737461 - 9737416
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    ||||||| |||||||  ||||||||||||||||| |||||||||||    
T  9737461 tgtcccgtgagcatagctcagttggtaggacaatacattattatat 9737416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 223
Target Start/End: Complemental strand, 25689548 - 25689503
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||    
T  25689548 tgtcccgtgagcatagctcagttggttggacaatgcattattatat 25689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 49012390 - 49012445
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggt 231  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||| ||||    
T  49012390 tttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgaaggggt 49012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 38778781 - 38778734
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||    
T  38778781 ttgtcccgtgagcatatctcagttggtaggacaatgcattattatatg 38778734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 47552215 - 47552293
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||  |||||||||||||||||||||||||||||| |||||  | ||||||||| || ||||||  |||||||||    
T  47552215 gagcatagctcagttggtaggacaatgcattattatatgcaagggccggggttcgaaccccggacaccctacttattca 47552293  T

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Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 8195909 - 8195954
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||    
T  8195909 tgtcccgtgagcatagctcagttggtaggacaatgcattattatat 8195954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 46337968 - 46337923
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| || |||| |||||||||||||||||||||||||||||||    
T  46337968 gtcccgtgaacatagttcagttggtaggacaatgcattattatatg 46337923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 30644162 - 30644209
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  30644162 ttgtcccgtgagtatagctcagttggtaggacaatgcattattatatg 30644209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 36316076 - 36316029
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||| ||||||||||||||||    
T  36316076 ttgtcccgtgagcatagctcagttggtaggataatgcattattatatg 36316029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 2366350 - 2366416
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||| ||| |||  ||||||| |||||||||||||||||||||| | |||| | |||||||||    
T  2366350 ttgtcccgtgagtataactcagttgataggacaatgcattattatatgcaggggtcggggttcgaac 2366416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 4590699 - 4590661
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  4590699 gagcatagctcagttggtaggacaatgcattattatatg 4590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 7263099 - 7263053
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  7263099 tgtcccgtgagtatagctcagttggtaggacaatgcattattatatg 7263053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 14967727 - 14967689
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  14967727 gagcataactcagttggtaggacaatgcattattatatg 14967689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 15397203 - 15397165
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  15397203 gagcataactcagttggtaggacaatgcattattatatg 15397165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 22047522 - 22047560
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  22047522 gagcatagctcagttggtaggacaatgcattattatatg 22047560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 27047808 - 27047770
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  27047808 gagcatagctcagttggtaggacaatgcattattatatg 27047770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 34962065 - 34962027
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  34962065 gagcatagctcagttggtaggacaatgcattattatatg 34962027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 46716335 - 46716373
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  46716335 gagcatagctcagttggtaggacaatgcattattatatg 46716373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 4104474 - 4104527
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggt 231  Q
    ||||||| |||||||  ||| ||| |||||||||||||||||||||| ||||||    
T  4104474 tgtcccgtgagcatagctcaattgttaggacaatgcattattatatgcaagggt 4104527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 4818031 - 4818060
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  4818031 tcagttggtaggacaatgcattattatatg 4818060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 21086115 - 21086144
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  21086115 tcagttggtaggacaatgcattattatatg 21086144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 22741198 - 22741243
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  || |||||||||||||||||||||||||||    
T  22741198 gtcccgtgagcatagctcggttggtaggacaatgcattattatatg 22741243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 22966058 - 22966013
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  22966058 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 22966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 25818281 - 25818326
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  25818281 gtcccgtgagcataactcagttggtaggataatgcattattatatg 25818326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 27907980 - 27907951
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  27907980 tcagttggtaggacaatgcattattatatg 27907951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 29710184 - 29710155
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  29710184 tcagttggtaggacaatgcattattatatg 29710155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 30152752 - 30152805
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    |||||||||||||||||||||||||||||  | |||| | ||||||||| ||||    
T  30152752 tcagttggtaggacaatgcattattatatataggggtcggggttcgaaccccga 30152805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 31279390 - 31279361
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  31279390 tcagttggtaggacaatgcattattatatg 31279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 34948101 - 34948146
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||||||||||||||| |||||    
T  34948101 gtcccgtgagcatagctcagttggtaggacaatgcattatcatatg 34948146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 36176882 - 36176911
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  36176882 tcagttggtaggacaatgcattattatatg 36176911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 42887148 - 42887213
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  |||||||||| |||||| |||||||||||| | ||| || |||||||||    
T  42887148 tgtcccgtgagcatagctcagttggtacgacaattcattattatatgcaggggctgaggttcgaac 42887213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 43970953 - 43970908
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||| ||||||||||||||||||    
T  43970953 gtcccgtgagcataactcagttggtagaacaatgcattattatatg 43970908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 44437925 - 44437880
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||| |||||||||||||||||||||||    
T  44437925 gtcccgtgagcatagctcagttagtaggacaatgcattattatatg 44437880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 45198198 - 45198153
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  45198198 gtcccgtgagcataactcagttggtaggataatgcattattatatg 45198153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 924376 - 924328
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||||| | |||||||||||||| | |||||| |||||||||    
T  924376 tcagttggtaggatagtgcattattatatgtaggggttggggttcgaac 924328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 21925470 - 21925514
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| |||||||  ||| |||||||||||||||||||||||||    
T  21925470 gtcccgtgagcatagctcaattggtaggacaatgcattattatat 21925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 25087050 - 25087006
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| ||||||| || |||| ||||||||||||||||||||||    
T  25087050 gtcccgtgagcatagtttagttcgtaggacaatgcattattatat 25087006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 30699821 - 30699861
Alignment:
Q  203 taggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||| | |||||| |||||||||    
T  30699821 taggacaatgcattattatatgtaggggttggggttcgaac 30699861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 35368407 - 35368455
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||||||| |||||||||||||  | ||| ||||||||||||    
T  35368407 tcagttggtaggacattgcattattatatttaggggctgtggttcgaac 35368455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 9924848 - 9924915
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||| | |||| | |||||||||    
T  9924848 tttgtcccgtgagcatagttcagttggtaggacaacgcattattatatgcaggggtcggggttcgaac 9924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Complemental strand, 9172473 - 9172407
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| | |||| | |||||||||    
T  9172473 ttgtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaac 9172407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Complemental strand, 13211452 - 13211388
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||| | |||| | |||||||||    
T  13211452 gtcccgtgagtatagttcagttggtaggacaatgcattattatatgcatgggtcggggttcgaac 13211388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 243
Target Start/End: Original strand, 50657875 - 50657939
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| |||||||  |||||||||||||||||||||||||||||| | ||||  ||||||||||    
T  50657875 gtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcatggttcgaac 50657939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 20753230 - 20753180
Alignment:
Q  174 actttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||| |||||||  ||||||||||||| ||||||||||||||||    
T  20753230 actttgtcccgtgagcatagctcagttggtaggaaaatgcattattatatg 20753180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 34773776 - 34773698
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    ||||||| |||||||| |||||||||||||||||||||| | ||| || ||||||||| || ||||||  |||||||||    
T  34773776 gagcatagttcagttgataggacaatgcattattatatgcaggggctgaggttcgaaccccggacaccccacttattca 34773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 46482918 - 46482872
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  46482918 tgtcccgtgagcataattcagttggtaggacaatacattattatatg 46482872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 47018047 - 47018001
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  47018047 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 47018001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 224
Target Start/End: Original strand, 44074845 - 44074893
Alignment:
Q  175 ctttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  44074845 ctttgtcccgcgagcatagctcagt-ggtaggacaatgcattattatatg 44074893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 4722566 - 4722519
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| || ||||  ||||||||||||||||||||||||||||||    
T  4722566 ttgtcccgtgaacatagctcagttggtaggacaatgcattattatatg 4722519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 243
Target Start/End: Original strand, 43142495 - 43142562
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| || |||||||  |||||| |||||||| |||||||||||||| | |||||| |||||||||    
T  43142495 tttgtctcgtgagcataactcagttagtaggacagtgcattattatatgtaggggttggggttcgaac 43142562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 46735071 - 46735024
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  46735071 ttgtcccgtgagcatagctcagttggtaggacactgcattattatatg 46735024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 32885690 - 32885728
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  32885690 gagcatagctcagttggtaggacaatgcattattatatg 32885728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 35031385 - 35031423
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  35031385 gagcatagctcagttggtaggacaatgcattattatatg 35031423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 50783535 - 50783489
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||| ||||||||||||||    
T  50783535 tgtcccgtgagcatagctcagttggtaggacattgcattattatatg 50783489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 52608660 - 52608622
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  52608660 gagcatagctcagttggtaggacaatgcattattatatg 52608622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 52743222 - 52743268
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  || |||||||||||||||||||||||||||    
T  52743222 tgtcccgtgagcatagctcggttggtaggacaatgcattattatatg 52743268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 53291436 - 53291482
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||| ||||||||||||||||    
T  53291436 tgtcccgtgagcataactcagttggtaggataatgcattattatatg 53291482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 548987 - 548942
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||   |||||||||||||||||||||||||||||    
T  548987 gtcccgtgagcatagcccagttggtaggacaatgcattattatatg 548942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 3442854 - 3442883
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  3442854 tcagttggtaggacaatgcattattatatg 3442883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 3465594 - 3465623
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  3465594 tcagttggtaggacaatgcattattatatg 3465623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 3544516 - 3544487
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  3544516 tcagttggtaggacaatgcattattatatg 3544487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 5430465 - 5430420
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||    
T  5430465 gtcccgtgagcatagctcagttggtaggacaatgtattattatatg 5430420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 6053991 - 6054020
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  6053991 tcagttggtaggacaatgcattattatatg 6054020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 9285759 - 9285714
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  9285759 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 9285714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 222
Target Start/End: Original strand, 17859771 - 17859816
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattata 222  Q
    |||||| | |||||||  ||||||||||||||||||||||||||||    
T  17859771 ttgtcctgtgagcatagctcagttggtaggacaatgcattattata 17859816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 20181204 - 20181269
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    |||| ||| |||||||  |||||||||||||||||||| ||||||||| | |||| | ||||||||    
T  20181204 ttgttccgtgagcatagctcagttggtaggacaatgcagtattatatgtaggggtaggggttcgaa 20181269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 24234174 - 24234129
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||    
T  24234174 gtcccgtgagcatagctcagttggtaggtcaatgcattattatatg 24234129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 26203880 - 26203823
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||  ||||||||||||||| ||||||||||||| || |||||| |||| ||||    
T  26203880 gagcatagctcagttggtaggacagtgcattattatataaaggggttggggtttgaac 26203823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 33944463 - 33944418
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||| ||||||||||||||||    
T  33944463 gtcccgtgagcataactcagttggtaggataatgcattattatatg 33944418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 40200840 - 40200811
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  40200840 tcagttggtaggacaatgcattattatatg 40200811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 43115263 - 43115308
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||| || ||||||||||||||||||| |||||||||||    
T  43115263 gtcccgtgagcttagttcagttggtaggacaatgtattattatatg 43115308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 51077878 - 51077907
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  51077878 tcagttggtaggacaatgcattattatatg 51077907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 56546549 - 56546504
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||| ||||||||||||||||||||||||||    
T  56546549 gtcccgtgagcatagctcaattggtaggacaatgcattattatatg 56546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 6365336 - 6365364
Alignment:
Q  196 cagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||||||||||||||    
T  6365336 cagttggtaggacaatgcattattatatg 6365364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16201307 - 16201355
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||| ||| | |||||| |||| ||||    
T  16201307 tcagttggtaggacaatgcattattacatgtaggggttggggtttgaac 16201355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 35333071 - 35333043
Alignment:
Q  196 cagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||||||||||||||    
T  35333071 cagttggtaggacaatgcattattatatg 35333043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 35909262 - 35909218
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| || |||| |||||||||||||||||| ||||||||||||    
T  35909262 tcccgtgaacatagttcagttggtaggacaatacattattatatg 35909218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 40150469 - 40150553
Alignment:
Q  181 cccgcgagcatacttcagttggtagga-caatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||  | |||| | ||||||||| || ||||||| |||||||||    
T  40150469 cccgtgagcatagttcagttggcaggaacaatgcattattatatacaggggtcggggttcgaaccccggacacctcacttattca 40150553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 52560760 - 52560804
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| |||||||  ||| ||||||||||||||||||||||||||    
T  52560760 tcccgtgagcatagctcaattggtaggacaatgcattattatatg 52560804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 55266534 - 55266490
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| |||||||  ||||||||||| ||||||||||||||||||    
T  55266534 tcccgtgagcatagctcagttggtagaacaatgcattattatatg 55266490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 55345766 - 55345822
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    |||||||  ||||||||||||||||||| |||||||||  | |||||| ||||||||    
T  55345766 gagcatagctcagttggtaggacaatgcgttattatatacaggggttgaggttcgaa 55345822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 33206750 - 33206837
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||| |||||||  |||||||||||||||||||||||||||||| | ||| || ||||||||| || ||||||  |||||||||    
T  33206750 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggctggggttcgaaccccggacaccccacttattca 33206837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 50720417 - 50720479
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcga 241  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| | |||| | |||||||    
T  50720417 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgtatgggtcgaggttcga 50720479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 50792431 - 50792369
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcga 241  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||| | |||| | |||||||    
T  50792431 gtcccgtgagcatagttcagttggtaggacaatgcattattatatgtatgggtcgaggttcga 50792369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 13540048 - 13540000
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||    
T  13540048 tcagttggtaggacaatgcattattatatgtaggggttggggttcgaac 13540000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 29507228 - 29507276
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||||    
T  29507228 tcagttggtaggacaatgcattattatatgcaggagttgtggttcgaac 29507276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 243
Target Start/End: Complemental strand, 43566899 - 43566832
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||| || ||||  |||||||||||||||||||||||||||||| | |||| | |||||||||    
T  43566899 tttgtcccgtgaacatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaac 43566832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 34136756 - 34136822
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||| | |||||||  ||||||||||| |||||||||||||||||| | |||||| |||||||||    
T  34136756 ttgtcctgtgagcatagctcagttggtagaacaatgcattattatatgtaggggttggggttcgaac 34136822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 242
Target Start/End: Original strand, 35483261 - 35483327
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    ||||||||| |||||||  |||||| ||||||||||||||||||||||| | |||| | ||||||||    
T  35483261 tttgtcccgtgagcatagctcagttagtaggacaatgcattattatatgcaggggtcggggttcgaa 35483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 263
Target Start/End: Original strand, 48173288 - 48173366
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||  |||||||||| ||||||||||||||||||| | ||||||  |||||||| || ||||||| |||||||||    
T  48173288 gagcatagctcagttggtaagacaatgcattattatatgtatgggttggagttcgaaccccggacacctcacttattca 48173366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 40786282 - 40786339
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||  |||||||||||||||||||||||||||||| | |||| | |||||||||    
T  40786282 gagcatagctcagttggtaggacaatgcattattatatgcatgggtcggggttcgaac 40786339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 49146095 - 49146164
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||||||||||||||||||||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  49146095 tcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccggacaccccacttattca 49146164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 49639023 - 49639068
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  49639023 gtcccgtgagcatagctcagttggtaggacaatgcattattatatg 49639068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 243
Target Start/End: Original strand, 50724362 - 50724426
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||| | |||||| |||||||||    
T  50724362 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggggttggggttcgaac 50724426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 50788486 - 50788422
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||| |||||||  ||||||||| |||||||||||||||||||| | |||||| |||||||||    
T  50788486 tgtcccgtgagcatagctcagttggt-ggacaatgcattattatatgcaggggttggggttcgaac 50788422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 53467952 - 53467989
Alignment:
Q  187 agcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||||||||||||||||||||||||||    
T  53467952 agcatagttcagttggtaggacaatgcattattatatg 53467989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 35849363 - 35849315
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | ||  ||||||||||||    
T  35849363 tcagttggtaggacaatgcattattatatgcagggactgtggttcgaac 35849315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 24751362 - 24751315
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  |||||| |||||||||||||||||||||||    
T  24751362 ttgtcccgtgagcatagctcagttagtaggacaatgcattattatatg 24751315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 42271115 - 42271068
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  |||||||||||||||||||||| |||||||    
T  42271115 ttgtcccgtgagcatagctcagttggtaggacaatgcattgttatatg 42271068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 223
Target Start/End: Complemental strand, 54983812 - 54983765
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    ||||||||| |||||||  ||||||||||||| |||||||||||||||    
T  54983812 tttgtcccgtgagcatagctcagttggtaggataatgcattattatat 54983765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 32876209 - 32876171
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  32876209 gagcatatctcagttggtaggacaatgcattattatatg 32876171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 34503217 - 34503255
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  34503217 gagcatagctcagttggtaggacaatgcattattatatg 34503255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 229
Target Start/End: Complemental strand, 36727546 - 36727512
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagg 229  Q
    |||||||||||||||||||||||||||||| ||||    
T  36727546 tcagttggtaggacaatgcattattatatgcaagg 36727512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 41121873 - 41121911
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  41121873 gagcataactcagttggtaggacaatgcattattatatg 41121911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 45713474 - 45713520
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  | ||||||||||||||||||||||||||||    
T  45713474 tgtcccgtgagcataacttagttggtaggacaatgcattattatatg 45713520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 225
Target Start/End: Complemental strand, 47062150 - 47062120
Alignment:
Q  195 tcagttggtaggacaatgcattattatatga 225  Q
    |||||||||||||||||||||||||||||||    
T  47062150 tcagttggtaggacaatgcattattatatga 47062120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 49019187 - 49019241
Alignment:
Q  188 gcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    ||||| ||||||||||| ||||||||||||||||||| | |||| | ||||||||    
T  49019187 gcatagttcagttggtaagacaatgcattattatatgtaggggtcggggttcgaa 49019241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 16006606 - 16006521
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||| |||||||  ||||||||||| |||||||||||| ||||| ||| || | ||||||||| || ||||||  |||||||||    
T  16006606 gtcccgtgagcataactcagttggtagaacaatgcattataatatgcaagagtcggggttcgaaccccagacaccccacttattca 16006521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 16278051 - 16278006
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||||| |||||||||||||||    
T  16278051 gtcccgtgagcatagctcagttggtaggaccatgcattattatatg 16278006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 17269411 - 17269334
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccgacacctaacttattca 263  Q
    |||||||  ||||||||||||||| |||||||||||||| | || |   ||||||||  ||||||||| |||||||||    
T  17269411 gagcataactcagttggtaggacattgcattattatatgtagggatcagggttcgaattccgacacctcacttattca 17269334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 17440065 - 17440020
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  || |||||||||||||||||||||||||||    
T  17440065 gtcccgtgagcatagctcggttggtaggacaatgcattattatatg 17440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 20244145 - 20244174
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  20244145 tcagttggtaggacaatgcattattatatg 20244174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 20623877 - 20623832
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||| |||||||||||||||||||||||    
T  20623877 gtcccgtgagcataactcagtttgtaggacaatgcattattatatg 20623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 21420273 - 21420244
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  21420273 tcagttggtaggacaatgcattattatatg 21420244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 23820640 - 23820669
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  23820640 tcagttggtaggacaatgcattattatatg 23820669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 229
Target Start/End: Complemental strand, 335112 - 335080
Alignment:
Q  197 agttggtaggacaatgcattattatatgaaagg 229  Q
    |||||||||||||||||||||||||||| ||||    
T  335112 agttggtaggacaatgcattattatatgtaagg 335080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 19540333 - 19540381
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||  |||||||  ||||||||||||||||| ||||||||||||    
T  19540333 tttgtcccatgagcatagctcagttggtaggacaatacattattatatg 19540381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 26366295 - 26366231
Alignment:
Q  199 ttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattc 262  Q
    ||||||||| |||||||||||||||| |  |||||| |||||||| || ||||||| ||||||||    
T  26366295 ttggtaggataatgcattattatatgcagaggttgtagttcgaactccggacaccttacttattc 26366231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 32508897 - 32508825
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    ||||||||| |||| ||  ||||||| ||||| |||||||||||||||| | |||| | ||||||||| ||||    
T  32508897 tttgtcccgtgagcctaactcagttgataggataatgcattattatatgcaggggtcggggttcgaaccccga 32508825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 33072282 - 33072330
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| || |||||||  ||||||| ||||||||||||||||||||||    
T  33072282 tttgtctcgtgagcataactcagttgataggacaatgcattattatatg 33072330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 14487571 - 14487620
Alignment:
Q  194 ttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||||||||||||||||||||||| | |||||| |||||||||    
T  14487571 ttcagttggtaggacaatgcattattatatgtaggggttggggttcgaac 14487620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 29050795 - 29050840
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  29050795 gtcccgcgagcatagctcagttggtaggacaatgcattattatatg 29050840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 248
Target Start/End: Original strand, 18872517 - 18872585
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    ||||| |||||||  |||||||||||||||||||||||||||||| | |||| | ||||||||| ||||    
T  18872517 tcccgtgagcatagctcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccga 18872585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 22600035 - 22599990
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  22600035 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 22599990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 33800888 - 33800933
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  33800888 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 33800933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 36888193 - 36888148
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  36888193 gtcccgtgagcatatctcagttggtaggacaatgcattattatatg 36888148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 224
Target Start/End: Complemental strand, 38426852 - 38426815
Alignment:
Q  187 agcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  38426852 agcatacttcagttggtaggataatgcattattatatg 38426815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 9577294 - 9577342
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| ||| |||  ||||||||||||||||||||||||||||||    
T  9577294 tttgtcccgtgagtataactcagttggtaggacaatgcattattatatg 9577342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 26169096 - 26169048
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||||||    
T  26169096 tcagttggtaggacaatgcattattatatgcaggggttggagttcgaac 26169048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 29096401 - 29096357
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaaggg 230  Q
    |||||||  |||||||||||||||||||||||||||||| |||||    
T  29096401 gagcatagctcagttggtaggacaatgcattattatatgcaaggg 29096357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 29841350 - 29841394
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaaggg 230  Q
    |||||||  |||||||||||||||||||||||||||||| |||||    
T  29841350 gagcatagctcagttggtaggacaatgcattattatatgcaaggg 29841394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 40339202 - 40339154
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| |||||||  |||||| |||||||||||||||||||||||    
T  40339202 tttgtcccgtgagcatagctcagttagtaggacaatgcattattatatg 40339154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 179 - 242
Target Start/End: Complemental strand, 4666546 - 4666483
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaa 242  Q
    |||||| |||||||  ||| ||||||| |||||||||||||||||| |||||| | ||||||||    
T  4666546 gtcccgtgagcatagctcaattggtagaacaatgcattattatatgcaagggtcgaggttcgaa 4666483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 20945993 - 20945946
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||| ||||||||||||||||||||||||||    
T  20945993 ttgtcccgtgagcataactcaattggtaggacaatgcattattatatg 20945946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 843469 - 843423
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  |||||||||| |||||||||||||||||||    
T  843469 tgtcccgtgagcatatctcagttggtatgacaatgcattattatatg 843423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 18478005 - 18478043
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  18478005 gagcatagctcagttggtaggacaatgcattattatatg 18478043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 19059105 - 19059059
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  |||||||||||||||||||||||| |||||    
T  19059105 tgtcccgtgagcatagctcagttggtaggacaatgcattatcatatg 19059059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 224
Target Start/End: Original strand, 22863779 - 22863809
Alignment:
Q  194 ttcagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||||||||||||||||    
T  22863779 ttcagttggtaggacaatgcattattatatg 22863809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 27440391 - 27440353
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  27440391 gagcatagctcagttggtaggacaatgcattattatatg 27440353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 223
Target Start/End: Original strand, 34010540 - 34010574
Alignment:
Q  189 catacttcagttggtaggacaatgcattattatat 223  Q
    |||| ||||||||||||||||||||||||||||||    
T  34010540 catagttcagttggtaggacaatgcattattatat 34010574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 264
Target Start/End: Complemental strand, 42801525 - 42801455
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattcat 264  Q
    |||||||||| || |||||||||||||||| | |||| | ||||||||| || ||||||| ||||||||||    
T  42801525 tcagttggtatgataatgcattattatatgcaggggtcggggttcgaaccccggacacctcacttattcat 42801455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 6614138 - 6614093
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||  |||| |||||| ||||||||||||||||||    
T  6614138 gtcccgcgagcataactcagctggtagaacaatgcattattatatg 6614093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 9176886 - 9176841
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||| |||||||||||||||||||||    
T  9176886 gtcccgtgagcataactcagttggaaggacaatgcattattatatg 9176841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 20699509 - 20699480
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  20699509 tcagttggtaggacaatgcattattatatg 20699480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 21017690 - 21017661
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  21017690 tcagttggtaggacaatgcattattatatg 21017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 27219663 - 27219618
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  | ||||||||||||||||||||||||||||    
T  27219663 gtcccgtgagcatagcttagttggtaggacaatgcattattatatg 27219618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 29144153 - 29144182
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  29144153 tcagttggtaggacaatgcattattatatg 29144182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 31934959 - 31934930
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  31934959 tcagttggtaggacaatgcattattatatg 31934930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 33729789 - 33729818
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  33729789 tcagttggtaggacaatgcattattatatg 33729818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 42455478 - 42455449
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  42455478 tcagttggtaggacaatgcattattatatg 42455449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 6671870 - 6671842
Alignment:
Q  195 tcagttggtaggacaatgcattattatat 223  Q
    |||||||||||||||||||||||||||||    
T  6671870 tcagttggtaggacaatgcattattatat 6671842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 7645201 - 7645157
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| |||||||  | ||||||||||||||||||||||||||||    
T  7645201 tcccgtgagcatagcttagttggtaggacaatgcattattatatg 7645157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 20762292 - 20762340
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||| |||||||||||||||||  || ||||| |||||||||    
T  20762292 tcagttggtagaacaatgcattattatatataacggttggggttcgaac 20762340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Original strand, 23648341 - 23648369
Alignment:
Q  196 cagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||||||||||||||    
T  23648341 cagttggtaggacaatgcattattatatg 23648369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 23810231 - 23810203
Alignment:
Q  196 cagttggtaggacaatgcattattatatg 224  Q
    |||||||||||||||||||||||||||||    
T  23810231 cagttggtaggacaatgcattattatatg 23810203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 10262734 - 10262819
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||| |||||||  |||||||||||||||||||||||||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  10262734 gtcccgtgagcataactcagttggtaggacaatgcattattatatgcaggggtcggggttcgaaccccagacaccccacttattca 10262819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 22538550 - 22538619
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccg-acacctaacttattca 263  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||  ||| |||||| |||||||||    
T  22538550 tcagttggtaggacaatgcattattatatgcaggggttggggttcgaatcccgaacacctcacttattca 22538619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 248
Target Start/End: Original strand, 27495541 - 27495602
Alignment:
Q  187 agcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    |||||| ||||||||||||||||||||||||||||||| | |||||| | ||||||| ||||    
T  27495541 agcataattcagttggtaggacaatgcattattatatgcaggggttgagattcgaaccccga 27495602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 30474297 - 30474250
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||| |||||||  ||||||||||||||||||||||||||||||    
T  30474297 ttgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 30474250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 36426949 - 36426870
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccg-acacctaacttattcat 264  Q
    |||||||  ||| |||||||||||||||||||||||||| | |||||| ||||||||| ||| |||||  ||||||||||    
T  36426949 gagcatagctcacttggtaggacaatgcattattatatgtaggggttggggttcgaactccgaacaccccacttattcat 36426870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 36520882 - 36520795
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||| |||| ||  |||||||||||||||||||||||||||||| | |||| | ||||||||| || ||||||  |||||||||    
T  36520882 ttgtcccgtgagcgtagctcagttggtaggacaatgcattattatatgtaggggtcggggttcgaaccccggacaccccacttattca 36520795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 224
Target Start/End: Complemental strand, 580884 - 580838
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  ||||||||||||||||||||||||||||||    
T  580884 tgtcccgtgagcatagctcagttggtaggacaatgcattattatatg 580838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 263
Target Start/End: Complemental strand, 2114536 - 2114450
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    ||||||| |||||||  ||||||||||| |||||||||||||||||| | |||| | ||||||||| || ||||||| | |||||||    
T  2114536 tgtcccgtgagcatagctcagttggtagaacaatgcattattatatgtaggggtcggggttcgaaccccggacacctcatttattca 2114450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 3179317 - 3179383
Alignment:
Q  177 ttgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||| |||||||  ||||||||||| |||||||||||||||||| | |||| | |||||||||    
T  3179317 ttgtcccgtgagcataactcagttggtagaacaatgcattattatatgcaggggtcgaggttcgaac 3179383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 9791988 - 9791950
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  9791988 gagcatagttcagttggtaggacaatgcattattatatg 9791950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 248
Target Start/End: Original strand, 31956868 - 31956930
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    |||||||  |||||||||||||||||||||||||||||| | ||| || ||||||||| ||||    
T  31956868 gagcataactcagttggtaggacaatgcattattatatgtaggggctggggttcgaactccga 31956930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 15392311 - 15392266
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  15392311 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 15392266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 31564090 - 31564135
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  31564090 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 31564135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 34620532 - 34620577
Alignment:
Q  198 gttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||    
T  34620532 gttggtaggacaatgcattattatatgcaagggttggggtttgaac 34620577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 42091371 - 42091330
Alignment:
Q  182 ccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||||||||  |||||||||||||||||||||||||||||    
T  42091371 ccgcgagcataactcagttggtaggacaatgcattattatat 42091330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Complemental strand, 8234895 - 8234847
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||| |||||||  ||||||||||||||||| ||||||||||||    
T  8234895 tttgtcccgtgagcatagctcagttggtaggacaatacattattatatg 8234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 20122574 - 20122530
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||    
T  20122574 tcccgtgagcatagctcagttggtaggacaatgcattattatatg 20122530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 33001654 - 33001602
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatgaaaggg 230  Q
    ||||||| |||||||  ||||||||||||||||||| |||||||||| |||||    
T  33001654 tgtcccgtgagcataactcagttggtaggacaatgcgttattatatgcaaggg 33001602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 39726518 - 39726470
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||||| | |||| | |||||||||    
T  39726518 tcagttggtaggacaatgcattattatatgtaggggtcgaggttcgaac 39726470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 226
Target Start/End: Original strand, 1836599 - 1836630
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaa 226  Q
    ||||||||||||||||||||||||||||||||    
T  1836599 tcagttggtaggacaatgcattattatatgaa 1836630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 14879122 - 14879168
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| ||||||| ||| |||||||||||||| ||||||||||||    
T  14879122 tgtcccgtgagcatagttccgttggtaggacaatacattattatatg 14879168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 224
Target Start/End: Original strand, 17154643 - 17154689
Alignment:
Q  178 tgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||| |||||||  || |||||||||||||||||||||||||||    
T  17154643 tgtcccgtgagcataactcggttggtaggacaatgcattattatatg 17154689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 18007254 - 18007304
Alignment:
Q  189 catacttcagttggtaggacaatgcattattatatgaaagggttgtggttc 239  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||| |||||    
T  18007254 catagttcagttggtaggacaatgtattattatatgtaaaggttggggttc 18007304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 22297545 - 22297507
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  22297545 gagcatagctcagttggtaggacaatgcattattatatg 22297507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 243
Target Start/End: Complemental strand, 24034135 - 24034089
Alignment:
Q  197 agttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||||||||| | |||| | |||||||||    
T  24034135 agttggtaggacaatgcattattatatgcaggggtcggggttcgaac 24034089  T

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Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 26807177 - 26807139
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  26807177 gagcataactcagttggtaggacaatgcattattatatg 26807139  T

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Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 36481071 - 36481109
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  36481071 gagcatagctcagttggtaggacaatgcattattatatg 36481109  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 7086248 - 7086293
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||| |||||||||||||||||    
T  7086248 gtcccgtgagcatagctcagttggtagggcaatgcattattatatg 7086293  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 15690134 - 15690089
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  |||||||||||||||||||||| |||||||    
T  15690134 gtcccgtgagcatagctcagttggtaggacaatgcattgttatatg 15690089  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Complemental strand, 16028192 - 16028163
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  16028192 tcagttggtaggacaatgcattattatatg 16028163  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 18386892 - 18386827
Alignment:
Q  199 ttggtaggacaatgcattattatatgaaagggttgtggttcgaacacc-gacacctaacttattca 263  Q
    |||||||||||||||||||||||||| | ||| || ||||||||| || ||||||  |||||||||    
T  18386892 ttggtaggacaatgcattattatatgtaggggctggggttcgaactccggacaccccacttattca 18386827  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 32891292 - 32891321
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  32891292 tcagttggtaggacaatgcattattatatg 32891321  T

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Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 224
Target Start/End: Original strand, 32943350 - 32943379
Alignment:
Q  195 tcagttggtaggacaatgcattattatatg 224  Q
    ||||||||||||||||||||||||||||||    
T  32943350 tcagttggtaggacaatgcattattatatg 32943379  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Original strand, 32891618 - 32891658
Alignment:
Q  203 taggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    |||||||||||||||||||||| | |||||| |||||||||    
T  32891618 taggacaatgcattattatatgcaggggttggggttcgaac 32891658  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 32988346 - 32988410
Alignment:
Q  180 tcccgcgagcatacttcagttggtaggacaatgcattattatatgaaagggttgtggttcgaaca 244  Q
    ||||| |||||||  |||||||||| ||||||||||||||||| | | ||| || ||||||||||    
T  32988346 tcccgtgagcatagctcagttggtaagacaatgcattattatacgcaggggctggggttcgaaca 32988410  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 33956251 - 33956295
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| |||||||  ||| |||||||||||||||||||||||||    
T  33956251 gtcccgtgagcataactcaattggtaggacaatgcattattatat 33956295  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 38402792 - 38402836
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatat 223  Q
    |||||| |||||||  || ||||||||||||||||||||||||||    
T  38402792 gtcccgtgagcataactcggttggtaggacaatgcattattatat 38402836  T

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Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 38530279 - 38530251
Alignment:
Q  195 tcagttggtaggacaatgcattattatat 223  Q
    |||||||||||||||||||||||||||||    
T  38530279 tcagttggtaggacaatgcattattatat 38530251  T

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Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 44721788 - 44721740
Alignment:
Q  195 tcagttggtaggacaatgcattattatatgaaagggttgtggttcgaac 243  Q
    ||||||||||| |||||||||||||||||| | |||| | |||||||||    
T  44721788 tcagttggtagaacaatgcattattatatgcaggggtcggggttcgaac 44721740  T

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Target: scaffold1086 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1086
Description:

Target: scaffold1086; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 2483 - 2528
Alignment:
Q  179 gtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||  ||||||||||||||||||||||||||||||    
T  2483 gtcccgtgagcataactcagttggtaggacaatgcattattatatg 2528  T

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Target: scaffold0334 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 5296 - 5344
Alignment:
Q  176 tttgtcccgcgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| ||||||||||  ||| ||||||||||||||||||||||||||    
T  5296 tttgtcgcgcgagcatagctcaattggtaggacaatgcattattatatg 5344  T

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Target: scaffold0343 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 8573 - 8624
Alignment:
Q  197 agttggtaggacaatgcattattatatgaaagggttgtggttcgaacaccga 248  Q
    ||||| |||||||||||||||||||||| | |||||| ||||||||| ||||    
T  8573 agttgataggacaatgcattattatatgtaggggttggggttcgaaccccga 8624  T

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Target: scaffold0191 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 224
Target Start/End: Original strand, 16848 - 16887
Alignment:
Q  185 cgagcatacttcagttggtaggacaatgcattattatatg 224  Q
    ||||||||  ||||||||||||||||||||||||||||||    
T  16848 cgagcatagctcagttggtaggacaatgcattattatatg 16887  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 43789 - 43751
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  43789 gagcatagctcagttggtaggacaatgcattattatatg 43751  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 224
Target Start/End: Original strand, 159016 - 159054
Alignment:
Q  186 gagcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||||  ||||||||||||||||||||||||||||||    
T  159016 gagcataactcagttggtaggacaatgcattattatatg 159054  T

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Target: scaffold0765 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 187 - 224
Target Start/End: Original strand, 747 - 784
Alignment:
Q  187 agcatacttcagttggtaggacaatgcattattatatg 224  Q
    |||||| |||||||| ||||||||||||||||||||||    
T  747 agcatagttcagttgataggacaatgcattattatatg 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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