View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19106_low_10 (Length: 365)
Name: NF19106_low_10
Description: NF19106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19106_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 39924145 - 39924494
Alignment:
| Q |
1 |
gcaagtagcaaaaggacctcnnnnnnntatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagata |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39924145 |
gcaagtagcaaaaggacctcaaaaaaatatacagaaaattttattgtcttcttgtctagctcaaaatagaaaatgatgccctacaaatttattcaagata |
39924244 |
T |
|
| Q |
101 |
ggaatcacctccatttttggnnnnnnnctatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgct |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39924245 |
ggaatcacctccatttttggaaaaaaactatcacattcccttagattttgagattttcagcagaatccaaaggcacacttgcacaaatcaagttgatgct |
39924344 |
T |
|
| Q |
201 |
tacgtacttcttcttccaattgggcacttcattttcctttgaatcatatgtctcagctcactaaactatccacatgctatagtcaataatataataatta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
39924345 |
tacgtacttcttcttccaattgggcacttcattttcctttgaatcatatgtctcagctcactaaactatccacatgctgtagtcaataatataataatta |
39924444 |
T |
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| Q |
301 |
attgtatatacaacacctcatcatttatctatatatattcatgttcagtt |
350 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39924445 |
attgtatatacaacacctcatcatttatctatatatattcatgttcagtt |
39924494 |
T |
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