View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19106_low_22 (Length: 251)

Name: NF19106_low_22
Description: NF19106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19106_low_22
NF19106_low_22
[»] chr6 (20 HSPs)
chr6 (1-112)||(34996657-34996768)
chr6 (1-111)||(32348934-32349044)
chr6 (1-110)||(34995462-34995571)
chr6 (1-107)||(3000694-3000800)
chr6 (1-112)||(32712466-32712577)
chr6 (1-110)||(32347919-32348028)
chr6 (1-110)||(32713781-32713890)
chr6 (1-110)||(11801240-11801349)
chr6 (1-110)||(18572996-18573104)
chr6 (1-100)||(21094516-21094615)
chr6 (1-96)||(27719847-27719941)
chr6 (3-107)||(19383056-19383157)
chr6 (39-106)||(21095281-21095348)
chr6 (51-110)||(18574211-18574270)
chr6 (51-104)||(29477901-29477954)
chr6 (11-110)||(13561394-13561494)
chr6 (1-91)||(7628435-7628526)
chr6 (41-109)||(7629706-7629773)
chr6 (11-93)||(13562214-13562296)
chr6 (201-233)||(29466282-29466314)
[»] chr5 (22 HSPs)
chr5 (1-110)||(12372425-12372534)
chr5 (1-111)||(19228949-19229059)
chr5 (1-110)||(13278129-13278238)
chr5 (1-110)||(19229971-19230080)
chr5 (1-110)||(6803523-6803631)
chr5 (1-88)||(9083216-9083303)
chr5 (26-112)||(12373613-12373699)
chr5 (1-110)||(4032923-4033032)
chr5 (1-110)||(4031932-4032043)
chr5 (2-110)||(39349592-39349700)
chr5 (1-110)||(39350543-39350652)
chr5 (1-110)||(18654408-18654517)
chr5 (1-110)||(18655550-18655659)
chr5 (1-109)||(39164167-39164273)
chr5 (1-92)||(9082090-9082181)
chr5 (11-110)||(38603650-38603750)
chr5 (3-110)||(13276932-13277031)
chr5 (11-110)||(42962139-42962238)
chr5 (80-110)||(6802406-6802436)
chr5 (35-91)||(13520633-13520689)
chr5 (51-110)||(14356587-14356647)
chr5 (49-93)||(39051591-39051635)
[»] chr7 (46 HSPs)
chr7 (1-110)||(45399908-45400017)
chr7 (1-111)||(44748460-44748570)
chr7 (1-108)||(18788460-18788567)
chr7 (1-112)||(43961044-43961155)
chr7 (2-111)||(19217739-19217848)
chr7 (1-111)||(29187927-29188037)
chr7 (1-110)||(18787259-18787368)
chr7 (1-110)||(43113785-43113894)
chr7 (1-110)||(43962467-43962576)
chr7 (1-110)||(44417568-44417677)
chr7 (1-110)||(44420421-44420529)
chr7 (2-110)||(9391631-9391739)
chr7 (1-110)||(9392713-9392822)
chr7 (1-110)||(13750534-13750643)
chr7 (1-110)||(48793414-48793523)
chr7 (2-110)||(13597255-13597363)
chr7 (2-106)||(29186776-29186880)
chr7 (3-110)||(27072552-27072659)
chr7 (3-110)||(27205654-27205761)
chr7 (1-110)||(7011744-7011854)
chr7 (1-110)||(7027102-7027212)
chr7 (2-110)||(26005463-26005571)
chr7 (3-106)||(3537539-3537641)
chr7 (1-104)||(37237132-37237234)
chr7 (3-106)||(48792556-48792659)
chr7 (12-94)||(32518534-32518616)
chr7 (1-110)||(43114985-43115094)
chr7 (2-103)||(3538478-3538579)
chr7 (39-107)||(13599158-13599226)
chr7 (3-110)||(12630677-12630784)
chr7 (2-99)||(32519658-32519755)
chr7 (3-95)||(44746839-44746931)
chr7 (3-106)||(13749116-13749218)
chr7 (50-110)||(44231759-44231819)
chr7 (59-110)||(9357694-9357745)
chr7 (45-110)||(37235939-37236004)
chr7 (191-243)||(13750382-13750434)
chr7 (1-88)||(44230538-44230625)
chr7 (51-110)||(45398684-45398743)
chr7 (201-243)||(40739077-40739119)
chr7 (38-100)||(42611564-42611626)
chr7 (67-104)||(45689023-45689060)
chr7 (51-110)||(47536751-47536810)
chr7 (12-93)||(42520338-42520419)
chr7 (51-95)||(19218897-19218941)
chr7 (54-98)||(29409151-29409195)
[»] chr3 (50 HSPs)
chr3 (1-110)||(37610661-37610770)
chr3 (1-111)||(28777584-28777694)
chr3 (1-110)||(31937146-31937255)
chr3 (1-110)||(43393951-43394060)
chr3 (1-110)||(35758115-35758224)
chr3 (2-111)||(46903521-46903630)
chr3 (1-111)||(47431084-47431194)
chr3 (1-110)||(28776559-28776668)
chr3 (1-110)||(52522038-52522146)
chr3 (1-110)||(17740941-17741050)
chr3 (1-110)||(19042261-19042370)
chr3 (1-110)||(35759129-35759238)
chr3 (1-107)||(5689830-5689936)
chr3 (1-106)||(10978116-10978220)
chr3 (1-107)||(47429731-47429839)
chr3 (1-110)||(50879798-50879907)
chr3 (2-110)||(17116314-17116421)
chr3 (2-110)||(23073272-23073380)
chr3 (1-100)||(31938216-31938314)
chr3 (1-110)||(37609432-37609541)
chr3 (2-111)||(46902443-46902552)
chr3 (2-110)||(21729086-21729194)
chr3 (2-110)||(55210806-55210914)
chr3 (1-110)||(2233203-2233312)
chr3 (1-110)||(11346923-11347032)
chr3 (1-94)||(53180718-53180811)
chr3 (1-110)||(55209893-55210001)
chr3 (1-89)||(5691014-5691102)
chr3 (2-106)||(21728022-21728126)
chr3 (1-110)||(2232713-2232822)
chr3 (1-110)||(11348370-11348478)
chr3 (3-110)||(47917511-47917618)
chr3 (1-88)||(54353134-54353221)
chr3 (1-89)||(17742211-17742300)
chr3 (1-89)||(19043531-19043620)
chr3 (2-110)||(50881014-50881115)
chr3 (1-106)||(52525262-52525366)
chr3 (38-110)||(33111743-33111815)
chr3 (51-110)||(43392767-43392826)
chr3 (1-91)||(54354308-54354398)
chr3 (2-103)||(10979080-10979181)
chr3 (34-110)||(53764894-53764969)
chr3 (1-98)||(53765876-53765973)
chr3 (54-110)||(23072203-23072259)
chr3 (44-110)||(15290388-15290454)
chr3 (53-103)||(53101685-53101735)
chr3 (53-110)||(34015685-34015742)
chr3 (11-110)||(50003123-50003223)
chr3 (39-94)||(27749236-27749291)
chr3 (69-110)||(23091924-23091965)
[»] chr4 (31 HSPs)
chr4 (1-110)||(7261441-7261550)
chr4 (1-110)||(8815255-8815364)
chr4 (1-110)||(38032318-38032427)
chr4 (1-112)||(22621978-22622089)
chr4 (1-110)||(17356472-17356581)
chr4 (1-110)||(34095557-34095666)
chr4 (1-110)||(35927014-35927123)
chr4 (1-111)||(38031279-38031389)
chr4 (1-112)||(22623039-22623150)
chr4 (1-110)||(18091691-18091800)
chr4 (1-110)||(23757868-23757977)
chr4 (1-107)||(10803000-10803106)
chr4 (2-110)||(10804093-10804201)
chr4 (1-112)||(5433303-5433414)
chr4 (3-110)||(35925804-35925911)
chr4 (3-106)||(56234923-56235025)
chr4 (13-110)||(48501222-48501319)
chr4 (38-110)||(36074692-36074764)
chr4 (3-110)||(8814248-8814358)
chr4 (1-110)||(48499475-48499583)
chr4 (39-109)||(48081466-48081536)
chr4 (2-95)||(35191929-35192019)
chr4 (60-107)||(56233878-56233925)
chr4 (54-112)||(48081276-48081334)
chr4 (1-93)||(17357778-17357870)
chr4 (194-238)||(56234796-56234840)
chr4 (54-104)||(34122725-34122775)
chr4 (5-64)||(35193140-35193199)
chr4 (38-104)||(48462907-48462973)
chr4 (11-110)||(21570324-21570423)
chr4 (12-94)||(17521931-17522013)
[»] chr1 (28 HSPs)
chr1 (1-110)||(7111373-7111482)
chr1 (2-111)||(51693259-51693368)
chr1 (1-111)||(52761493-52761603)
chr1 (1-111)||(7110337-7110447)
chr1 (1-110)||(17244286-17244395)
chr1 (1-110)||(52759474-52759583)
chr1 (3-110)||(21203124-21203231)
chr1 (1-106)||(52086738-52086841)
chr1 (1-110)||(38235048-38235156)
chr1 (1-110)||(51468799-51468908)
chr1 (1-110)||(45228386-45228495)
chr1 (1-110)||(51468450-51468559)
chr1 (1-89)||(1823215-1823303)
chr1 (1-95)||(5488780-5488874)
chr1 (1-88)||(40187713-40187800)
chr1 (1-91)||(5488612-5488702)
chr1 (1-111)||(45229500-45229610)
chr1 (1-91)||(50484913-50485003)
chr1 (1-88)||(18819373-18819460)
chr1 (2-103)||(52087679-52087780)
chr1 (3-95)||(1822022-1822114)
chr1 (54-110)||(47533752-47533808)
chr1 (1-107)||(50483621-50483727)
chr1 (199-238)||(45228698-45228737)
chr1 (2-84)||(47533069-47533150)
chr1 (51-110)||(18820673-18820732)
chr1 (201-243)||(6242211-6242253)
chr1 (51-95)||(49619734-49619778)
[»] chr8 (26 HSPs)
chr8 (1-110)||(30640908-30641017)
chr8 (1-111)||(9245328-9245438)
chr8 (1-112)||(26364852-26364963)
chr8 (3-112)||(521993-522102)
chr8 (1-110)||(41636942-41637051)
chr8 (2-106)||(9244177-9244281)
chr8 (1-110)||(20309034-20309143)
chr8 (1-110)||(21095667-21095776)
chr8 (5-110)||(26366092-26366197)
chr8 (3-100)||(34642778-34642874)
chr8 (1-112)||(30644601-30644711)
chr8 (2-109)||(20309950-20310058)
chr8 (2-109)||(21096583-21096691)
chr8 (1-111)||(43584519-43584629)
chr8 (51-110)||(22012298-22012357)
chr8 (2-110)||(34643863-34643966)
chr8 (51-110)||(22013157-22013216)
chr8 (1-110)||(43585843-43585951)
chr8 (1-91)||(41638070-41638159)
chr8 (46-101)||(31203071-31203126)
chr8 (54-104)||(3714443-3714493)
chr8 (51-100)||(43133976-43134025)
chr8 (199-243)||(26365846-26365890)
chr8 (54-104)||(3713206-3713256)
chr8 (57-94)||(20066240-20066277)
chr8 (51-95)||(35462905-35462949)
[»] chr2 (14 HSPs)
chr2 (1-110)||(16602836-16602945)
chr2 (1-110)||(27892234-27892343)
chr2 (1-110)||(38243853-38243962)
chr2 (26-110)||(27891242-27891326)
chr2 (1-88)||(23833078-23833165)
chr2 (1-106)||(38242994-38243096)
chr2 (1-91)||(44800983-44801073)
chr2 (54-110)||(5033623-5033679)
chr2 (51-110)||(16604107-16604166)
chr2 (13-110)||(370885-370982)
chr2 (51-100)||(5034743-5034792)
chr2 (2-67)||(26388330-26388395)
chr2 (11-110)||(38593147-38593246)
chr2 (11-110)||(38596743-38596842)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-96)||(9269-9363)
[»] scaffold0141 (2 HSPs)
scaffold0141 (5-91)||(31148-31234)
scaffold0141 (1-91)||(35202-35292)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-91)||(79520-79610)
scaffold0049 (5-91)||(83578-83664)
[»] scaffold1425 (2 HSPs)
scaffold1425 (1-110)||(1499-1608)
scaffold1425 (3-110)||(247-353)
[»] scaffold0878 (2 HSPs)
scaffold0878 (1-100)||(2934-3034)
scaffold0878 (36-110)||(1914-1988)
[»] scaffold0026 (1 HSPs)
scaffold0026 (44-110)||(104405-104471)
[»] scaffold0018 (1 HSPs)
scaffold0018 (39-100)||(25252-25313)
[»] scaffold0081 (1 HSPs)
scaffold0081 (50-95)||(42923-42968)


Alignment Details
Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 34996768 - 34996657
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34996768 ccaattttgataattttaatctcctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 34996669  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  34996668 cttcttcttccc 34996657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32349044 - 32348934
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32349044 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 32348945  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  32348944 cttcttcttcc 32348934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34995462 - 34995571
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| ||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34995462 ccaattttaataattttaatcccctaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacatctaatttatttacttt 34995561  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  34995562 cttcttcttc 34995571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 3000800 - 3000694
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||||||||  || | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  3000800 ccaattttgataattttaatcccctaaaaacacagatcgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttacttt 3000701  T
Q  101 cttcttc 107  Q
    |||||||    
T  3000700 cttcttc 3000694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 32712466 - 32712577
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| |||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  32712466 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtaccaccaacacctaacttatttacttt 32712565  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  32712566 cttcttcttccc 32712577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 32347919 - 32348028
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | | ||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32347919 ccaattttgataattttaatcccctaaaaaaagagaacgttggattacgggggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 32348018  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  32348019 cttcttcttc 32348028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32713890 - 32713781
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||    |||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  32713890 ccaattttgataattttaatcccctaaaaaaagtgaccgttggattacggaggtctataagattttacagtgtatcaccaacacctaatttatttacttt 32713791  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  32713790 cttcttcttc 32713781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11801349 - 11801240
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||| |||||  | |||||||||||||| |||||||||| ||||||||||||||||  |||||||||||||||||||||    
T  11801349 ccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcattaacacctaatttatttacttt 11801250  T
Q  101 cttcttcttc 110  Q
    ||| ||||||    
T  11801249 cttattcttc 11801240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18572996 - 18573104
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | || ||||||||||| |||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  18572996 ccaattttgataattttaatcccctaaaaaag-acactgttggattacggaggtctatcaaattttacagtgtatcaccaacacataatttatttacttt 18573094  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  18573095 cttcttcttc 18573104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21094516 - 21094615
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||| ||||| |||||||||||  | |||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21094516 ccaattttgataactttaatcccctaaaaaaagagaccgttggattacggaggtctactagattttatagtgtatcaccaacacctaatttatttacttt 21094615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 27719847 - 27719941
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 96  Q
    ||||||||||| ||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27719847 ccaattttgatgattttaatcccctaaaaaag-agaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 27719941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 19383157 - 19383056
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||||||||||||||  |||||||||   | ||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19383157 aattttgataattttaatgccctaaaaag--agaccgttggattacgatggtctatcagattttatagtgtatca-caacatctaatttatttactttct 19383061  T
Q  103 tcttc 107  Q
    |||||    
T  19383060 tcttc 19383056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 21095348 - 21095281
Alignment:
Q  39 gttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttctt 106  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  21095348 gttggattacggaggtctaccagattttatagtgtatcaccaacacctaatttatttactttattctt 21095281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 18574270 - 18574211
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  18574270 aggtctatcagattttatagtgtaccaccaacaccggatttatttactttcttcttcttc 18574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 29477901 - 29477954
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    ||||||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  29477901 aggtctaccagattttatggtgtatcaccaacacctgatttatttactttcttc 29477954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 13561394 - 13561494
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat-ttactttcttcttctt 109  Q
    ||||||||||| ||| |||||  | | |||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||    
T  13561394 taattttaaactcctcaaaaagaagatcgttggataaagaaggtccatcagatctaatagtgtatcaccaacacctaatttatatcactttcttcatctt 13561493  T
Q  110 c 110  Q
    |    
T  13561494 c 13561494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7628435 - 7628526
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||||||||||| || |||||||||||  || |||||| ||||| | || |||| ||||||| | |||||||||||||||||||||||    
T  7628435 ccaattttgataatttcaatcccctaaaaaaaaaagaccgttagattatggagatctaccagatttcacagtgtatcaccaacacctaattt 7628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 109
Target Start/End: Complemental strand, 7629773 - 7629706
Alignment:
Q  41 tggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttctt 109  Q
    |||||||||||| | ||||||||||||||||||||| |||||| ||||||| |||||||| ||| ||||    
T  7629773 tggattacgaagatttatcagattttatagtgtatctccaacatctaattt-tttactttattcatctt 7629706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 13562296 - 13562214
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat 93  Q
    ||||||||||| |||||||||  | || ||||||| | | || || ||||||| | | |||||||||||||||||||||||||    
T  13562296 taattttaaactcctaaaaaagaagactgttggataaaggagatccatcagatctaacagtgtatcaccaacacctaatttat 13562214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 233
Target Start/End: Original strand, 29466282 - 29466314
Alignment:
Q  201 tcaaattatgcttttaaaaacccaatcttcatg 233  Q
    |||||||||| ||||||||||||||||||||||    
T  29466282 tcaaattatgtttttaaaaacccaatcttcatg 29466314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 5e-46; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12372425 - 12372534
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||||  |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12372425 ccaattttgataattttaataccctaaaaaaacataccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 12372524  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  12372525 cttcttcttc 12372534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19228949 - 19229059
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  19228949 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctattagattttatagtgtatcatcaacacctaatttatttacttt 19229048  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  19229049 cttcttcttcc 19229059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13278238 - 13278129
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||| || ||||  | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13278238 ccaattttgataattttaatcccatagaaaaagagaccgttggattagggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 13278139  T
Q  101 cttcttcttc 110  Q
     |||||||||    
T  13278138 attcttcttc 13278129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19230080 - 19229971
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||| |||||  | |||||||||||||| |||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  19230080 ccaattttgataattttaatcccctcaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcatcaacacttaatttatttacttt 19229981  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  19229980 cttcttcttc 19229971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6803631 - 6803523
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||  ||||||| || |||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6803631 ccaattttgataattttaatcctttaaaaaaacagaccgttagattacaaag-tctatcagattttatagtgtatcaccaacatctaatttatttacttt 6803533  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  6803532 cttcttcttc 6803523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9083303 - 9083216
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9083303 ccaattttgataattttaatcccctaaaaaaggagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaa 9083216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 12373699 - 12373613
Alignment:
Q  26 aaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttccc 112  Q
    |||||| || |||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  12373699 aaaaaaacagaccgttggattacgaatgtctatcagattttacactgtatcaccaacacctaatttatttactttcttcttcttccc 12373613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4033032 - 4032923
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| || ||||||||  | |||||||||||||| ||||||||||||||||||| |||||||  |||||||| ||||||||||||    
T  4033032 ccaattttaataattttaatccactaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcattaacacctagtttatttacttt 4032933  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  4032932 cttcttcttc 4032923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4031932 - 4032043
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatt--tatttact 98  Q
    ||||||||||||||||||| || ||||||||  | ||||||| |||||| | ||||| ||||||||||||||||||||||||||||||||  ||||||||    
T  4031932 ccaattttgataattttaatccactaaaaaaagagaccgttgaattacggaagtctaccagattttatagtgtatcaccaacacctaatttatatttact 4032031  T
Q  99 ttcttcttcttc 110  Q
    ||||||||||||    
T  4032032 ttcttcttcttc 4032043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 39349592 - 39349700
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    ||||||| |||||||||| |||||||||||    |||||| ||||||| |||||||| ||||||||| ||| ||||||||||||||||||||||||||||    
T  39349592 caatttttataattttaatcccctaaaaaaagtgaccgtttgattacggaggtctattagattttatcgtggatcaccaacacctaatttatttactttc 39349691  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  39349692 ttcttcttc 39349700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 39350652 - 39350543
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| || ||||||||  | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| ||||    
T  39350652 ccaatttttataattttaatcctctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttttttgcttt 39350553  T
Q  101 cttcttcttc 110  Q
     ||| |||||    
T  39350552 attcatcttc 39350543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18654408 - 18654517
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||| ||||||| ||| | |||||  | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  || ||    
T  18654408 ccaattttgatcattttaatcccattaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatcaacatt 18654507  T
Q  101 cttcttcttc 110  Q
     |||||||||    
T  18654508 tttcttcttc 18654517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18655659 - 18655550
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||| |||||||||||||| |||||||||||  | ||||||| |||||||| |||||||||||||||  ||||||||||||||  ||||||||| || |     
T  18655659 ccaactttgataattttaatcccctaaaaaaagagaccgttgaattacgaaagtctatcagattttacggtgtatcaccaacaattaatttattaacctc 18655560  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  18655559 cttcttcttc 18655550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39164167 - 39164273
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||| |||||| ||| |||||||  | || |||| |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  39164167 ccaattttgata-ttttaatcccttaaaaaaa-agactgttgaattacggaggcctatcaaattttatagtgtatcaccaacacctaatttatttacttt 39164264  T
Q  101 cttcttctt 109  Q
     ||||||||    
T  39164265 tttcttctt 39164273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9082090 - 9082181
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattta 92  Q
    ||||||||||||||||||| |||||| ||||  | |||||||||| ||| | ||||||||||||||||||| |||| | |||||||||||||    
T  9082090 ccaattttgataattttaatcccctagaaaatgagaccgttggatcacggatgtctatcagattttatagtatatcgctaacacctaattta 9082181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 38603750 - 38603650
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat-ttactttcttcttctt 109  Q
    ||||||||||| |||||||||  | |||||||||| | ||||||| ||||||| | |||||||||||||||||||| |||||| | ||||||||| ||||    
T  38603750 taattttaaactcctaaaaaagaagaccgttggataaagaaggtccatcagatctaatagtgtatcaccaacacctcatttatatcactttcttcatctt 38603651  T
Q  110 c 110  Q
    |    
T  38603650 c 38603650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 13276932 - 13277031
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| ||| |||||||  | |||||||||||||| |||| ||||| ||||||        |||||||||||||||||||||||||||    
T  13276932 aattttgataattttaatcccttaaaaaaaaagaccgttggattacggaggtgtatcacatttta--------caccaacacctaatttatttactttct 13277023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 42962139 - 42962238
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||| || |||||  | |||||||||| | | |||||||| |||| | || |||||||||||||||||||||   ||||||||||| |||||    
T  42962139 taattttaaacctctcaaaaagaagaccgttggataaaggaggtctataagatctaatggtgtatcaccaacacctaattatattactttcttcatcttc 42962238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 110
Target Start/End: Original strand, 6802406 - 6802436
Alignment:
Q  80 aacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||||||||||||||||||||||    
T  6802406 aacacctaatttatttactttcttcttcttc 6802436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 13520689 - 13520633
Alignment:
Q  35 aaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    ||||||||||||||||||||||||   || ||||  |||||||||||||| ||||||    
T  13520689 aaccgttggattacgaaggtctattttatcttatgatgtatcaccaacacataattt 13520633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 14356587 - 14356647
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaattta-tttactttcttcttcttc 110  Q
    |||||||||| || | || ||||||||||||||||| ||||| |||||||||||| |||||    
T  14356587 aggtctatcacatctaattgtgtatcaccaacacctgatttattttactttcttcatcttc 14356647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 39051635 - 39051591
Alignment:
Q  49 gaaggtctatcagattttatagtgtatcaccaacacctaatttat 93  Q
    ||||||| ||||||| | ||||||||||| |||||||||||||||    
T  39051635 gaaggtccatcagatctaatagtgtatcatcaacacctaatttat 39051591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45400017 - 45399908
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45400017 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcactaacacctaatttatttacttt 45399918  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  45399917 cttcttcttc 45399908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 44748570 - 44748460
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||| ||||  | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44748570 ccaattttgataattttaatcccctagaaaaggagactgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 44748471  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  44748470 cttcttcttcc 44748460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18788567 - 18788460
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  18788567 ccaattttgataattttaatcctctaaaaaaatagaccgttggattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttacttt 18788468  T
Q  101 cttcttct 108  Q
    ||||||||    
T  18788467 cttcttct 18788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 43961044 - 43961155
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||| |||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43961044 ccaattttgataattttaatcctctacaaaaacagaccgttggattacaaaggtctatcagattttatagtgtatcactaacacctaatttatttacttt 43961143  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  43961144 cttcttcttccc 43961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 19217739 - 19217848
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    ||||||||||||||||||  ||||||||||  | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19217739 caattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttc 19217838  T
Q  102 ttcttcttcc 111  Q
    ||||||||||    
T  19217839 ttcttcttcc 19217848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29188037 - 29187927
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | ||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29188037 ccaattttgataattttaatcccctaaaaaaagagaccgttggattgcagaggtctatcagattttatagtgcatcaccaacacctaatttatttacttt 29187938  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  29187937 cttcttcttcc 29187927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18787259 - 18787368
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| |||| ||||||||||||| ||||||||||||||| |||||||||||||||    
T  18787259 ccaattttgataattttaatcccctaaaaaaatagaccgttggattacggaggtttatcagattttatggtgtatcaccaacacttaatttatttacttt 18787358  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  18787359 cttcttcttc 18787368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 43113785 - 43113894
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  43113785 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccagcacctaatttatttgcttt 43113884  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  43113885 cttcttcttc 43113894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43962576 - 43962467
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |  |||||||| || |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  43962576 ccaattttgataattttaatcatctaaaaaaacagaccgttggattacgaaggtctatcagattttatagtatatcactaacacctaatttatttccttt 43962477  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  43962476 cttcttcttc 43962467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44417568 - 44417677
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44417568 ccaattttgataattttaatcccctaaaaaaagagattgttggattacggaggtctatcagattttatagtctatcaccaacacctaatttatttacttt 44417667  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  44417668 cttcttcttc 44417677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44420529 - 44420421
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||||  ||||||||||  | ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  44420529 ccaattttgataattttaatgccctaaaaaaagataccgttggattacgaaggtctatcaga-tttatagtgtatcaccaacatctaatttatttacttt 44420431  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  44420430 cttcttcttc 44420421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 9391631 - 9391739
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| ||  |||||||  | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  9391631 caattttgataattttaatcctttaaaaaaagagaccgttggattacgaaggtctatcagattttatagtgtatcatcaacaccaaatttatttactttc 9391730  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  9391731 ttcttcttc 9391739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9392822 - 9392713
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||| ||||  | |||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9392822 ccaattttgataattttaatcccctagaaaaagagaccgttggattacagaggtctatcagattttatagtgtatcaccggcacctaatttatttacttt 9392723  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  9392722 cttcttcttc 9392713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13750643 - 13750534
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  13750643 ccaattttgataattttaatcccctaaaaaaacagaccgttggattacgaaggtctattagattttatagtgtatcatcatcaactaatttatatacttt 13750544  T
Q  101 cttcttcttc 110  Q
    | ||||||||    
T  13750543 cgtcttcttc 13750534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48793523 - 48793414
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | |||||||||  | ||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  48793523 ccaattttgataattttaatctcctaaaaaaagagaccgttggattacaaaggtgtataagattttatagtgtatcaccaacaccaaatttatttacttt 48793424  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  48793423 cttcttcttc 48793414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 13597255 - 13597363
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| || ||||||||  | | |||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13597255 caattttgataattttaatcctctaaaaaaagatatcgttggattagggaggtctataagattttatagtgtatcaccaacacctaatttatttactttc 13597354  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  13597355 ttcttcttc 13597363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 29186776 - 29186880
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| ||| |||||||  | ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29186776 caattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttc 29186875  T
Q  102 ttctt 106  Q
    |||||    
T  29186876 ttctt 29186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 27072659 - 27072552
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| || ||||||||  |||||||||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||||| |    
T  27072659 aattttgataattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtttatcaccaacacctaatttatttactttat 27072560  T
Q  103 tcttcttc 110  Q
    || |||||    
T  27072559 tcatcttc 27072552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 27205654 - 27205761
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| || ||||||||  |||||||||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||||| |    
T  27205654 aattttgataattttaatccactaaaaaaaaaaaccgttggattacagaggtctataagattttatagtctatcaccaacacctaatttatttactttat 27205753  T
Q  103 tcttcttc 110  Q
    || |||||    
T  27205754 tcatcttc 27205761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7011744 - 7011854
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 99  Q
    ||||||||||||||||||| ||  |||||||  || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7011744 ccaattttgataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactt 7011843  T
Q  100 tcttcttcttc 110  Q
    | ||| |||||    
T  7011844 tattcatcttc 7011854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7027102 - 7027212
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 99  Q
    ||||||||||||||||||| ||  |||||||  || |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7027102 ccaattttgataattttaatccattaaaaaaaaaagaccgttggattacggaggtctataagattttatagtgtatcaccaacacctaatttatttactt 7027201  T
Q  100 tcttcttcttc 110  Q
    | ||| |||||    
T  7027202 tattcatcttc 7027212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 26005463 - 26005571
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||  || ||||||||  | ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| |||||||    
T  26005463 caattttgataattttactccactaaaaaaagagaccgttggattacaaaggtctataagattttatagtgtatcaccaacacgtaatttatgtactttc 26005562  T
Q  102 ttcttcttc 110  Q
    ||| |||||    
T  26005563 ttcatcttc 26005571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 3537539 - 3537641
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||||||||| | |||||||||| |||||||| |||||||||| ||||||||||    
T  3537539 aattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtatatcaccatcacctaattt-tttactttct 3537637  T
Q  103 tctt 106  Q
    ||||    
T  3537638 tctt 3537641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 37237234 - 37237132
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||| || || ||||||||  | | |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37237234 ccaattttgataattt-aatcctctaaaaaaagagatcgttggattacggaggtctatcagattttatagtgtatgaccaacacctaatttatttacttt 37237136  T
Q  101 cttc 104  Q
    ||||    
T  37237135 cttc 37237132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 48792556 - 48792659
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| | |||||||||  | ||||||||||||| | ||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  48792556 aattttgataattttaatctcctaaaaaaagagaccgttggattacaagggtgtataagattttatagtgtatcaccaacaccaaatttatttactttct 48792655  T
Q  103 tctt 106  Q
    ||||    
T  48792656 tctt 48792659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 32518534 - 32518616
Alignment:
Q  12 aattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatt 94  Q
    |||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32518534 aattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatt 32518616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43115094 - 43114985
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||| |||||||  | |||||||||||||  | |||||||||||||||||||| |||| ||  ||||||||||||||||||    
T  43115094 ccaattttgataattttaatcccttaaaaaagaagaccgttggattactgaagtctatcagattttatagtgcatcatcataacctaatttatttacttt 43114995  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  43114994 cttcttcttc 43114985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 3538579 - 3538478
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||  |||||||||||  | |||||||||||||| || ||||||| ||||||  |||||||||||||| |||||||||||||||||    
T  3538579 caattttgataattttagtcccctaaaaaaagagaccgttggattacggagatctatcaaattttacggtgtatcaccaacatctaatttatttactttc 3538480  T
Q  102 tt 103  Q
    ||    
T  3538479 tt 3538478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 39 - 107
Target Start/End: Complemental strand, 13599226 - 13599158
Alignment:
Q  39 gttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttc 107  Q
    ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  13599226 gttggattacggaggtctatcagattttatagtgtatcagtaacacctaatttatttactttcttcttc 13599158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 12630677 - 12630784
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| |||||| ||||  | || ||||||||||  |||| |||||||||||||  || ||||| |||||||||||||||||||||||    
T  12630677 aattttgataattttaatcccctagaaaaagagactgttggattacagaggtatatcagattttattatggatcactaacacctaatttatttactttct 12630776  T
Q  103 tcttcttc 110  Q
    ||||||||    
T  12630777 tcttcttc 12630784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 32519755 - 32519658
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 99  Q
    ||||||| |||||||||| ||| |||||||  | ||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||| |||||||    
T  32519755 caattttaataattttaatcccttaaaaaaagagaccgttgaattacgaaggtctaccagattgtatagtgtgtcaccaacacctaatttttttactt 32519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 44746839 - 44746931
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||||||||||||||| ||| || ||||  | |||||||||||||| |||||||||| |||||||||||||| | |||||||||||||||||    
T  44746839 aattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcatattttatagtgtattatcaacacctaatttattt 44746931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 13749116 - 13749218
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| || ||||||||  | ||||||| |||||| |||||||| | ||||  ||||||||||||||||||||||||||||| |||||    
T  13749116 aattttgataattttaatcctctaaaaaatgagaccgttgaattacgtaggtctataaaatttc-tagtgtatcaccaacacctaatttatttaatttct 13749214  T
Q  103 tctt 106  Q
    ||||    
T  13749215 tctt 13749218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 44231819 - 44231759
Alignment:
Q  50 aaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  44231819 aaggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcctcttc 44231759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 9357745 - 9357694
Alignment:
Q  59 cagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  9357745 cagatcttatagtgtatcaccaacacctaatttatttactttcttcatcttc 9357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 37235939 - 37236004
Alignment:
Q  45 ttacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||| ||||| ||||||||||| | ||||||||||||||||||||||||||||||  ||||||||    
T  37235939 ttacggaggtcaatcagattttacaatgtatcaccaacacctaatttatttactttactcttcttc 37236004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 13750434 - 13750382
Alignment:
Q  191 atcatcttcatcaaattatgcttttaaaaacccaatcttcatgtcttcatctc 243  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  13750434 atcatcttcatcaaattatgcttttaaaaccccaatattcatgtcttcttctc 13750382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44230538 - 44230625
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    |||||||| ||||||| || ||||||  |||  | |||||||||||||  ||||||||||||||||| ||||||||| ||||||||||    
T  44230538 ccaattttaataatttcaatcccctacgaaaagagaccgttggattacagaggtctatcagattttacagtgtatcatcaacacctaa 44230625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 45398684 - 45398743
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||| ||||| || ||||||||||||||||||| |||||||||||||||||||| |||||    
T  45398684 aggtttatcaaatcttatagtgtatcaccaacatctaatttatttactttcttcatcttc 45398743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 40739077 - 40739119
Alignment:
Q  201 tcaaattatgcttttaaaaacccaatcttcatgtcttcatctc 243  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  40739077 tcaaattatgtttttaaaaacccaatcttcatgtcttcttctc 40739119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 42611564 - 42611626
Alignment:
Q  38 cgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||| |||| |||||||||| ||||||||||||| ||| || | |||||||||||||    
T  42611564 cgttggattaggaagatctatcagatcttatagtgtatcatcaatacttgatttatttacttt 42611626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 104
Target Start/End: Original strand, 45689023 - 45689060
Alignment:
Q  67 atagtgtatcaccaacacctaatttatttactttcttc 104  Q
    |||||||||||||||||| |||||||||||||||||||    
T  45689023 atagtgtatcaccaacacttaatttatttactttcttc 45689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 47536810 - 47536751
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||||||||| | || |||||||||||||||||||||   ||||||||||| |||||    
T  47536810 aggtctatcagatctaatggtgtatcaccaacacctaattatattactttcttcatcttc 47536751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 42520338 - 42520419
Alignment:
Q  12 aattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat 93  Q
    |||||||||||| | |||||  | |||||||||| | | ||||||||||||| | |  ||||||||||||||| ||||||||    
T  42520338 aattttaaacccattaaaaagtagaccgttggataaaggaggtctatcagatctaacggtgtatcaccaacacataatttat 42520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 19218941 - 19218897
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||| || |||||| | |||||||||||||||||||||||||||    
T  19218941 aggtccatgagatttaacagtgtatcaccaacacctaatttattt 19218897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 29409195 - 29409151
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttact 98  Q
    |||||||||| | | ||||||| ||||||||||||||||||||||    
T  29409195 tctatcagatctaacagtgtataaccaacacctaatttatttact 29409151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37610770 - 37610661
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37610770 ccaattttgataattttaatcccctaaaaaaaaagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 37610671  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  37610670 cttcttcttc 37610661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 28777694 - 28777584
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28777694 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 28777595  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  28777594 cttcttcttcc 28777584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 31937146 - 31937255
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31937146 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttttttacttt 31937245  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  31937246 cttcttcttc 31937255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43394060 - 43393951
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  43394060 ccaattttgataattttaaccccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaatttatttacttt 43393961  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  43393960 cttcttcttc 43393951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 35758115 - 35758224
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||   |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35758115 ccaattttgataattttaatccaaaaaaaaaacaaaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttacttt 35758214  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  35758215 cttcttcttc 35758224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 46903630 - 46903521
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||| ||||||| |||||||||||  | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  46903630 caattttgatgattttaatcccctaaaaaaaaagaccgttggattacggaggtctattagattttatagtgtatcaccaacacctaatttatttactttc 46903531  T
Q  102 ttcttcttcc 111  Q
    ||||||||||    
T  46903530 ttcttcttcc 46903521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 47431194 - 47431084
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||| | |||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  47431194 ccaattttgataattttaatcccctaaaaaaagagaccgttggattatggaggtctattagattttatagtgtatcacccacacctaatttatttacttt 47431095  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  47431094 cttcttcttcc 47431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28776559 - 28776668
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||||||||   | |||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  28776559 ccaattttgataattttaatcccctaaaaacagagaccgttggattacggaggtctatcagattttataatgtatcatcaacacctaatttatttacttt 28776658  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  28776659 cttcttcttc 28776668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52522038 - 52522146
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||| ||||| |||||||||||  | || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52522038 ccaattttgataactttaatcccctaaaaaaa-agacagttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 52522136  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  52522137 cttcttcttc 52522146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17740941 - 17741050
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||  ||||||   | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17740941 ccaattttgataattttaatcctttaaaaatagagaccgtcggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 17741040  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  17741041 cttcttcttc 17741050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19042261 - 19042370
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||  ||||||   | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19042261 ccaattttgataattttaatcctttaaaaatagagaccgtcggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 19042360  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  19042361 cttcttcttc 19042370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35759238 - 35759129
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |    |||||| || |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35759238 ccaattttgataattttaatctaaaaaaaaaacagaccgttggattacgaatgtctatcagattttacagtgtatcaccaacacctaatttatttacttt 35759139  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  35759138 cttcttcttc 35759129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 5689830 - 5689936
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||  ||||| |  | |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5689830 ccaattttgataattttaatcctttaaaacaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacttaatttatttacttt 5689929  T
Q  101 cttcttc 107  Q
    |||||||    
T  5689930 cttcttc 5689936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10978116 - 10978220
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||    
T  10978116 ccaattttaataattttaatcccctaaaaaaagaaaccgttggattacgaaggtctataaaattttatagtgtatcaccatcacctaattt-tttacttt 10978214  T
Q  101 cttctt 106  Q
    ||||||    
T  10978215 cttctt 10978220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 47429731 - 47429839
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaa--ccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttact 98  Q
    ||||||||||||||||||| |||||||||||  |||  | ||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  47429731 ccaattttgataattttaatcccctaaaaaaaaaaagactgttggattacggaggtctattagattttatagtgtatcaccaacatctaatttatttact 47429830  T
Q  99 ttcttcttc 107  Q
    |||||||||    
T  47429831 ttcttcttc 47429839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 50879798 - 50879907
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||| || ||||  ||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  50879798 ccaattttgataattttaatcccatagaaaaaaaaatcgttagattacggaggtctatcagattttatagtgtatcaccaacacctaatttgtttccttt 50879897  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  50879898 cttcttcttc 50879907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 17116314 - 17116421
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| ||| |||||||  | |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| ||||||    
T  17116314 caattttgataattttaatccc-taaaaaatgacaccgttggattacggaggtccatcagagtttatagtgtatcaccaacacctaatttattcactttc 17116412  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  17116413 ttcttcttc 17116421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 23073380 - 23073272
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| |||||||||||  | ||||||| |||||| |||| ||||| ||||||  ||||||||||||||||||||||||||||||||    
T  23073380 caattttgataattttaatcccctaaaaaaagagaccgttgaattacggaggtgtatcaaattttacggtgtatcaccaacacctaatttatttactttc 23073281  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  23073280 ttcttcttc 23073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31938314 - 31938216
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  31938314 ccaattttaataattttaatcccctaaaaaaagagaccgttggattacgaaggtctataagattttatagtgtatcaccaacacctaattt-tttacttt 31938216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37609432 - 37609541
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | |||||||||||| | |||||||| |||||| ||||||| ||| ||||||||||||||||||||||    
T  37609432 ccaattttaataattttaatcccctaaaaaaagagaccgttggattagggaggtctataagatttaatagtgtctcatcaacacctaatttatttacttt 37609531  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  37609532 cttcttcttc 37609541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 46902443 - 46902552
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| ||||||||| |  | |  ||| ||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  46902443 caattttgataattttaatcccctaaaagaagagattgttagattacggaggtctatcagattttatagtgtatcactaacaccaaatttatttactttc 46902542  T
Q  102 ttcttcttcc 111  Q
    ||||||||||    
T  46902543 ttcttcttcc 46902552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 21729194 - 21729086
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| || ||||||||  | ||| |||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||||||    
T  21729194 caattttgataattttaatcctctaaaaaatgagaccattggattatgaaggtctaccatattttatagtgtatcatcaacacctaatttatttactttc 21729095  T
Q  102 ttcttcttc 110  Q
    ||| |||||    
T  21729094 ttcatcttc 21729086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 55210914 - 55210806
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| || ||||||||  | || |||| |||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  55210914 caattttgataattttaatccactaaaaaaagatactgttgaattacggagatctatcagattttataatgtatcaccaacacataatttatttactttc 55210815  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  55210814 ttcttcttc 55210806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2233312 - 2233203
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||||||||  | | |||||||||| | || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  2233312 ccaattttgataattttaatcctctaaaaaaagagatcgttggattatggagatctataagattttatagcgtatcaccaacacctaatttaattacttt 2233213  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  2233212 cttcttcttc 2233203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 11346923 - 11347032
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||| ||||   | ||| |||||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||||    
T  11346923 ccaattttgataattttaatcccctgaaaagagagaccattggattatgaaggtctaccatattgtatagtgtatcaccaacacctaatttatttacttt 11347022  T
Q  101 cttcttcttc 110  Q
    |||| |||||    
T  11347023 cttcatcttc 11347032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 53180811 - 53180718
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatt 94  Q
    |||||||| |||||||||| || ||||||||  | |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  53180811 ccaattttaataattttaatcctctaaaaaaggagaccgttggattacggaggtctatcagattgtatagtgtatcaccaacacctaatttatt 53180718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 55209893 - 55210001
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || | ||||||  | ||| |||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  55209893 ccaattttgataattttaatccacgaaaaaag-agaccattggattacggaggtctatcagaatttatagtgtattaccaacacctaatttatttacttt 55209991  T
Q  101 cttcttcttc 110  Q
     |||||||||    
T  55209992 attcttcttc 55210001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5691102 - 5691014
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaat 89  Q
    |||||||||||||||| || |||||||||||  | |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  5691102 ccaattttgataatttaaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaat 5691014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 21728022 - 21728126
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| | |||||||||  | || ||| |||||||||||||||||  |||||||| ||||||||||||||||||||||||||| |||    
T  21728022 caattttgataattttaatctcctaaaaaagtagactgttagattacgaaggtctatctcattttataatgtatcaccaacacctaatttatttaccttc 21728121  T
Q  102 ttctt 106  Q
    |||||    
T  21728122 ttctt 21728126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2232713 - 2232822
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||| ||||  | ||| |||||||||| |||||||| ||||||||  |||||||| ||||||||||||||||||||||    
T  2232713 ccaattttaataattttaatcccctagaaaaaaagaccattggattacggaggtctatgagattttacggtgtatcagcaacacctaatttatttacttt 2232812  T
Q  101 cttcttcttc 110  Q
    ||| ||||||    
T  2232813 ctttttcttc 2232822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11348478 - 11348370
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||||  || || ||||  | ||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  11348478 ccaattttgataattttaattccttagaaaaagagaccgttgaattacggaggtctatcagattttatagtatatcacc-acacctaattaatttacttt 11348380  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  11348379 cttcttcttc 11348370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 47917618 - 47917511
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||| |||||||||| ||||||||||   | |  ||||||||||| |||| |||||||||||||||||||| ||||||||| |||||||||||||||     
T  47917618 aattttaataattttaatcccctaaaaataaagattgttggattacggaggtttatcagattttatagtgtattaccaacaccgaatttatttactttcc 47917519  T
Q  103 tcttcttc 110  Q
    ||||||||    
T  47917518 tcttcttc 47917511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 54353134 - 54353221
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    |||||||| |||||||||| |||| ||||||  | ||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  54353134 ccaatttttataattttaatccccgaaaaaaagagaccgttggattacgaaggtctatcagattttatcgtgtatcactaacacctaa 54353221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17742300 - 17742211
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattt-tatagtgtatcaccaacacctaat 89  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  17742300 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 17742211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19043620 - 19043531
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattt-tatagtgtatcaccaacacctaat 89  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||| || ||||||||| |||||||||||    
T  19043620 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagatttatacagtgtatcaacaacacctaat 19043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 50881115 - 50881014
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| |||||||||||        |||||||| ||||||||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  50881115 caattttgataattttaatcccctaaaaaaa-------ttggattatgaaggtctaccatattttatagtgtaccaccaacacctaatttatttattttc 50881023  T
Q  102 ttcttcttc 110  Q
    ||| |||||    
T  50881022 ttcatcttc 50881014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 52525366 - 52525262
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | |||||||||||| ||||||  || |||||||||| ||| ||||||||| ||||||| ||||||||    
T  52525366 ccaattttaataattttaatcccctaaaaaaagagaccgttggattatgaaggttaataagattttataatgtgtcaccaacatctaattt-tttacttt 52525268  T
Q  101 cttctt 106  Q
    ||||||    
T  52525267 cttctt 52525262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 33111815 - 33111743
Alignment:
Q  38 cgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||| |||||| |||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||||    
T  33111815 cgttgtattacggaggtctataaaattttatagtgtatctcccacacctaatttatttactttcttcttcttc 33111743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 43392767 - 43392826
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||    
T  43392767 aggtctatcagattttatagtgtaccaccaacaccaaatttatttattttcttcttcttc 43392826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 54354398 - 54354308
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||||||||||||||  ||||| ||||  | ||| ||||||||   ||||||||||||||||| |||||||||||||||||||||||    
T  54354398 ccaattttgataattttaattccctataaaaagagaccattggattatagaggtctatcagattttacagtgtatcaccaacacctaattt 54354308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 10979181 - 10979080
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||  ||| | |||||  | ||| |||||||||| |||| ||||| ||||||  |||||||||||||| |||||||||||||||||    
T  10979181 caattttgataattttagtccctttaaaaaagagaccattggattacggaggtttatcaaattttacggtgtatcaccaacatctaatttatttactttc 10979082  T
Q  102 tt 103  Q
    ||    
T  10979081 tt 10979080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Original strand, 53764894 - 53764969
Alignment:
Q  34 aaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||||| |||||| |||||||||||||||||| ||||||||||||||| |||||| |||||||| ||| |||||    
T  53764894 aaaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacttaattt-tttactttattcatcttc 53764969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 53765973 - 53765876
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttact 98  Q
    |||||||| |||||||||| ||||||||||   ||||  |||||||||| |||||||  |||||||| |||||||||||| || || |||||||||||    
T  53765973 ccaattttaataattttaatcccctaaaaagagaaactattggattacggaggtctacgagattttacagtgtatcaccaccatctgatttatttact 53765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 23072203 - 23072259
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  23072203 tctatcagattttatagtgtaccgccaacaccagatttatttactttcttcttcttc 23072259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 15290454 - 15290388
Alignment:
Q  44 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||| ||||||||| || |||||||||||||||| ||| |||||||||||||| ||||||| |||||    
T  15290454 attatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttattttcttcatcttc 15290388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 53101685 - 53101735
Alignment:
Q  53 gtctatcagattttatagtgtatcaccaacacctaatttatttactttctt 103  Q
    ||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  53101685 gtctaccagatcttatagtgtatcaccaacacttaatttatttactttctt 53101735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 34015742 - 34015685
Alignment:
Q  53 gtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||| ||||| |||| ||||||||||||||||| ||| ||||||||||||| |||||    
T  34015742 gtctaccagatcttatggtgtatcaccaacacctgattgatttactttcttcatcttc 34015685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 50003223 - 50003123
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat-ttactttcttcttctt 109  Q
    ||||||||||| ||| |||||  | |||||||||| | | ||||| ||||||| | |  ||||||||||||||| |||||||| ||||||||||| ||||    
T  50003223 taattttaaactccttaaaaataagaccgttggataaaggaggtcaatcagatctaacggtgtatcaccaacacataatttatattactttcttcctctt 50003124  T
Q  110 c 110  Q
    |    
T  50003123 c 50003123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 27749236 - 27749291
Alignment:
Q  39 gttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatt 94  Q
    ||||||| | |||| |||||||||| |||||||||||||||||||| | |||||||    
T  27749236 gttggataaagaagatctatcagatcttatagtgtatcaccaacacttgatttatt 27749291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 23091924 - 23091965
Alignment:
Q  69 agtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||||||||||||||||| || |||| |||||||    
T  23091924 agtgtatcaccaacacctaatttattaaccttctccttcttc 23091965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 3e-41; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7261550 - 7261441
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7261550 ccaattttgataattttaatcccctaaaaaaatagaccattggattacgaaggtctataagattttatagtgtatcaccaacacctaatttatttacttt 7261451  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  7261450 cttcttcttc 7261441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 8815364 - 8815255
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8815364 ccaattttgataattttaatcctctaaaaaaaaaaaccgttggattacggaggtctatcagattttatagtgtatcaccaacaccaaatttatttacttt 8815265  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  8815264 cttcttcttc 8815255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38032427 - 38032318
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38032427 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 38032328  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  38032327 cttcttcttc 38032318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22621978 - 22622089
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22621978 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccgacaccgaatttatttacttt 22622077  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  22622078 cttcttcttccc 22622089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17356472 - 17356581
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  17356472 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctagttcatttacttt 17356571  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  17356572 cttcttcttc 17356581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 34095666 - 34095557
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34095666 ccaattttgataattttaatcccctaaaaaaggagaccgttgaattacggaggtctatcagattttatagtgtatcacccacacctaatttatttacttt 34095567  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  34095566 cttcttcttc 34095557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 35927123 - 35927014
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | |||||||||  | | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35927123 ccaattttgataattttaatctcctaaaaaaaaagatcgttggattacgaaggtctaccagattttatagtgtatcaccaacacctaatttatttacttt 35927024  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  35927023 cttcttcttc 35927014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 38031279 - 38031389
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||| |||||||  | ||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38031279 ccaattttgataattttaatcccataaaaaaaaagaccgttgaattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 38031378  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  38031379 cttcttcttcc 38031389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22623150 - 22623039
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||| ||||  | |||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |    
T  22623150 ccaattttgataattttaatcccctacaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccaacatctaatttatttactct 22623051  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  22623050 cttcttcttccc 22623039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18091691 - 18091800
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | | |||||||  | ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18091691 ccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 18091790  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  18091791 cttcttcttc 18091800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23757977 - 23757868
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || | ||||||  | ||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23757977 ccaattttgataattttaatcctccaaaaaaagagaccgttgaattacggaggtctatcagattttatggtgtatcaccaacacctaatttatttacttt 23757878  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  23757877 cttcttcttc 23757868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 10803000 - 10803106
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||||  ||||||||||  | |||||||||||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  10803000 ccaattttgataattttaataccctaaaaaaagagaccgttggattacggaggtttatcagattttatattgtatcaccaacaccgaatttatttacttt 10803099  T
Q  101 cttcttc 107  Q
    |||||||    
T  10803100 cttcttc 10803106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 10804201 - 10804093
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| || ||||||||  | |||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  10804201 caattttgataattttaatccactaaaaaaaaagaccgttggattacggaggtctatcagattttacagtgtatcatcaacgcctaatttatttactttc 10804102  T
Q  102 ttcttcttc 110  Q
    ||| |||||    
T  10804101 ttcatcttc 10804093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 5433414 - 5433303
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||||  |||||||||   | || |||| |||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||    
T  5433414 ccaattttgataattttaataccctaaaaattgagactgttgtattacggaggtctatcagattttataatgtatcacaaacacctaatttatttaattt 5433315  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  5433314 cttcttcttccc 5433303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 35925804 - 35925911
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| |  ||||||||  | || ||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35925804 aattttgataattttaatcttctaaaaaaaaagactgttggattacggagatctatcagattttatagtgtatcgtcaacacctaatttatttactttct 35925903  T
Q  103 tcttcttc 110  Q
    ||||||||    
T  35925904 tcttcttc 35925911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 56235025 - 56234923
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||||||| |||||| || ||||||||| | |||  || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  56235025 aattttgatacttttaatcctctaaaaaac-agaccaatgaattacgaaggtctatcagattttataatgtatcaccaacacctaatttatttactttct 56234927  T
Q  103 tctt 106  Q
    ||||    
T  56234926 tctt 56234923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 110
Target Start/End: Complemental strand, 48501319 - 48501222
Alignment:
Q  13 attttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||| |||||||||||  | |||||| ||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  48501319 attttaatcccctaaaaaaagagaccgttagattacggaggtctgtcagattttattgtgtatcatcaacacctaatttatttactttcttcttcttc 48501222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 36074764 - 36074692
Alignment:
Q  38 cgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  36074764 cgttggattacgaaggtctatcatattttatagtgtatcaccaacacctaatttatttaatttcctcttcttc 36074692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 8814248 - 8814358
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacaccta----atttatttact 98  Q
    |||||||||||||||||  ||||||||||  | || ||||||||||| |||||||||||||||||||||||| ||||||||||||    |||||||||||    
T  8814248 aattttgataattttaataccctaaaaaat-agactgttggattacggaggtctatcagattttatagtgtaacaccaacacctaatttatttatttact 8814346  T
Q  99 ttcttcttcttc 110  Q
    ||||||||||||    
T  8814347 ttcttcttcttc 8814358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 48499475 - 48499583
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | | |||||||||||  |||||||||||||||||  |||||||||||||| ||||||| ||||||||    
T  48499475 ccaattttgataattttaatcccctaaaaaaagagatcgttggattacagaggtctatcagattttacggtgtatcaccaacatctaattt-tttacttt 48499573  T
Q  101 cttcttcttc 110  Q
     ||| |||||    
T  48499574 attcatcttc 48499583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 48081536 - 48081466
Alignment:
Q  39 gttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttctt 109  Q
    |||||||| || |||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  48081536 gttggattgcggaggtctttcagagtttataatgtatcaccaacacctaatttatttactttcttcttctt 48081466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 35191929 - 35192019
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    |||||||||||||||||| |||||||||||  | | |||||||||||| | |||||||| ||||||||||||   |||| ||||||||||||||    
T  35191929 caattttgataattttaatcccctaaaaaaagagaacgttggattacggaagtctatcaaattttatagtgt---accaccacctaatttattt 35192019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 56233878 - 56233925
Alignment:
Q  60 agattttatagtgtatcaccaacacctaatttatttactttcttcttc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  56233878 agattttatagtgtatcgccaacacctaatttatttactttcttcttc 56233925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 48081334 - 48081276
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttccc 112  Q
    ||||| ||| |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  48081334 tctatgagagtttatactgtatcaccaacacctaatttatttactttcttctttttccc 48081276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17357870 - 17357778
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat 93  Q
    ||||||||||||||||||| | ||| |||||  | ||||||| |||||| ||||||| ||||||||||| ||||||| ||| || ||||||||    
T  17357870 ccaattttgataattttaatctcctgaaaaaagagaccgttgaattacggaggtctaccagattttataatgtatcagcaatacttaatttat 17357778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 56234840 - 56234796
Alignment:
Q  194 atcttcatcaaattatgcttttaaaaacccaatcttcatgtcttc 238  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  56234840 atcttcatcaaattatgcttttaaaaccccaatcttcatgtcttc 56234796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 34122775 - 34122725
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  34122775 tctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 34122725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 35193199 - 35193140
Alignment:
Q  5 ttttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagatt 64  Q
    ||||||||||||||| |||||| ||||  | |||||||||||||| ||||||||||||||    
T  35193199 ttttgataattttaatcccctagaaaaagagaccgttggattacggaggtctatcagatt 35193140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 104
Target Start/End: Complemental strand, 48462973 - 48462907
Alignment:
Q  38 cgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    |||||||||| | || |||||||||| ||||| ||||||| |||||| | |||||||||||||||||    
T  48462973 cgttggattagggagatctatcagatcttatactgtatcatcaacacatgatttatttactttcttc 48462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 21570423 - 21570324
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||||| || |||||  | |||||||||| | | ||||||||||||| | || ||||||||||| | |||||||   ||||||||||| |||||    
T  21570423 taattttaaacctctcaaaaagaagaccgttggataaaggaggtctatcagatctaatcgtgtatcaccagcgcctaattatattactttcttcatcttc 21570324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 17521931 - 17522013
Alignment:
Q  12 aattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatt 94  Q
    |||||||| |||||||||||  | ||| |||||| |  ||||||||| |||| | | |||||||||||||||| |||||||||    
T  17521931 aattttaatcccctaaaaaagaagaccattggataaacaaggtctatgagatctaacagtgtatcaccaacacttaatttatt 17522013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7111482 - 7111373
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7111482 ccaattttgataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcatcaacacctaatttatttacttt 7111383  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  7111382 cttcttcttc 7111373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 51693259 - 51693368
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    ||||||||||||||||||  ||||||||||  | |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51693259 caattttgataattttaataccctaaaaaaagagaccgttggattacggaggtctatcggattttatagtgtatcaccaacacctaatttatttactttc 51693358  T
Q  102 ttcttcttcc 111  Q
    ||||||||||    
T  51693359 ttcttcttcc 51693368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 52761603 - 52761493
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||||| |||||  | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52761603 ccaattttgataattttaatcccctgaaaaaagagaccgttggattgcggaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 52761504  T
Q  101 cttcttcttcc 111  Q
    || ||||||||    
T  52761503 ctccttcttcc 52761493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7110337 - 7110447
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||||||||||  | | ||||||||| || ||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  7110337 ccaattttgataattttaatcccctaaaaaaagagatcgttggattgcggaggtctatcagattttatagtgtatcatcaacgcctaatttatttacttt 7110436  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  7110437 cttcttcttcc 7110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17244286 - 17244395
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | |||||||||  | |||||||||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  17244286 ccaattttgataattttaatctcctaaaaaaagagaccgttggattacggaggtctatcagattttataatgtatcaccgatacctaatttatttacttt 17244385  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  17244386 cttcttcttc 17244395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 52759474 - 52759583
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | | |||||||  | ||||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52759474 ccaattttgataattttaatctcttaaaaaatgagaccgttgaattacagaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 52759573  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  52759574 cttcttcttc 52759583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 21203124 - 21203231
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||| |||||| ||| |||||||||||  | ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21203124 aattttcataattctaatcccctaaaaaaagagaccgttggattacaaaggtctatcagattttatagtgtatcatcaacacctaatttatttactttct 21203223  T
Q  103 tcttcttc 110  Q
    | ||||||    
T  21203224 tattcttc 21203231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52086738 - 52086841
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||    
T  52086738 ccaattttaataattttaatcccctaaaaaa--aaaccgttggattacgaaggtctataaaattttatagtgtatcaccatcacctaatttttttacttt 52086835  T
Q  101 cttctt 106  Q
    ||||||    
T  52086836 cttctt 52086841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38235156 - 38235048
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||| ||||| |||  ||||||| |||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38235156 ccaattttaataagtttaatcccaaaaaaaac-aaaccgttggattacgaatgtctataagattttacagtgtatcaccaacacctaatttatttacttt 38235058  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  38235057 cttcttcttc 38235048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 51468908 - 51468799
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  ||| | |||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  51468908 ccaattttaataattttaatcccctaaaaaaaaaaagcattggattacggagatctattagattttacagtgtatcaccaacacctaatttatttacttt 51468809  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  51468808 cttcttcttc 51468799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45228386 - 45228495
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | |||||||||||||| || ||||||| ||||||||||||||||| ||| | |||||||||||||||    
T  45228386 ccaattttaataattttaatcccctaaaaaaagagaccgttggattacggagatctatcaaattttatagtgtatcacaaacgcttaatttatttacttt 45228485  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  45228486 cttcttcttc 45228495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 51468450 - 51468559
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | |  | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51468450 ccaattttaataattttaatcccctaaaaaaaaagattgatggattacggaggtctatcagattttatagtgtatcaccaacacccaatttatttacttt 51468549  T
Q  101 cttcttcttc 110  Q
     |||||||||    
T  51468550 tttcttcttc 51468559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1823303 - 1823215
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaat 89  Q
    ||||||||||||||||||| |  |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1823303 ccaattttgataattttaatcttctaaaaagataaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaat 1823215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5488874 - 5488780
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||||||||||||||||| ||| || ||||  | |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  5488874 ccaattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttattt 5488780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40187713 - 40187800
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    |||||||| |||||||||| |||||||||||  | |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40187713 ccaatttttataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcagattttatcgtgtatcaccaacacctaa 40187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5488612 - 5488702
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    ||||||||||||||||||| ||| || ||||  | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5488612 ccaattttgataattttaatcccttagaaaaagagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacgtaattt 5488702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 45229610 - 45229500
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||  |||||||  | |  ||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||| |||    
T  45229610 ccaattttgataattttaatcctataaaaaaaaagattgttggattacggaggtctatcagattttataatggatcaccaacacctaatttatttagttt 45229511  T
Q  101 cttcttcttcc 111  Q
    ||| |||||||    
T  45229510 cttgttcttcc 45229500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 50485003 - 50484913
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    ||||||||||||||||||| |||||||||||  | ||| |||||||||  ||||||||||||||||| |||||||||||||||||||||||    
T  50485003 ccaattttgataattttaatcccctaaaaaaagagaccattggattacataggtctatcagattttacagtgtatcaccaacacctaattt 50484913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 18819373 - 18819460
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    |||||||| |||||||||| ||||||  |||  |||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  18819373 ccaattttaataattttaatcccctatgaaaagaaaccgttggattacggaggtatatcagattttatagtgtatcaccaacacctaa 18819460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 103
Target Start/End: Complemental strand, 52087780 - 52087679
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||  |||||||||||  | ||||||| |||||| |||||||||| ||||||  |||||||||||||| |||||||||||| ||||    
T  52087780 caattttgataattttagtcccctaaaaaaagagaccgttgaattacggaggtctatcaaattttacggtgtatcaccaacatctaatttatttaatttc 52087681  T
Q  102 tt 103  Q
    ||    
T  52087680 tt 52087679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 1822022 - 1822114
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||||||||||||||| ||  |||||||  | |||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||    
T  1822022 aattttgataattttaatcctttaaaaaaagagaccgttgggttacgaaggtctatctgattttatagtgtatcattaacacctaatttattt 1822114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 47533808 - 47533752
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47533808 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcatcttc 47533752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 50483621 - 50483727
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 99  Q
    |||||||| |||||||||  |||||||||||   | || ||||||||||| | ||||| |||||||||| |||||| |||||||||||||||||||||||    
T  50483621 ccaatttttataattttactcccctaaaaaaaagagactgttggattacggaagtcta-cagattttatcgtgtataaccaacacctaatttatttactt 50483719  T
Q  100 tcttcttc 107  Q
    ||||||||    
T  50483720 tcttcttc 50483727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 238
Target Start/End: Original strand, 45228698 - 45228737
Alignment:
Q  199 catcaaattatgcttttaaaaacccaatcttcatgtcttc 238  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  45228698 catcaaattatgcttttaaaaccccaatcttcatgtcttc 45228737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 47533069 - 47533150
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacac 84  Q
    |||||||||||||||||| |  ||||||||| | || |||| |||| | | ||||||||||||||||| ||||||||||||||    
T  47533069 caattttgataattttaatcttctaaaaaac-agactgttgaattatggaagtctatcagattttataatgtatcaccaacac 47533150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 18820732 - 18820673
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||  |||||| |||||||||||| ||||||| ||| ||||||||||||| |||||    
T  18820732 aggtctactagatttgatagtgtatcactaacacctgattcatttactttcttcctcttc 18820673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 243
Target Start/End: Complemental strand, 6242253 - 6242211
Alignment:
Q  201 tcaaattatgcttttaaaaacccaatcttcatgtcttcatctc 243  Q
    |||||||||| |||||||||| |||||||||||||||| ||||    
T  6242253 tcaaattatgtttttaaaaactcaatcttcatgtcttcttctc 6242211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 49619778 - 49619734
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||||||||||||| |  ||||||||||||||||| ||||||||    
T  49619778 aggtctatcagatttaactgtgtatcaccaacacctgatttattt 49619734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30640908 - 30641017
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30640908 ccaattttaataattttaatcccctaaaaaaagagaccgttggattacggaggtctatcaaattttatagtgtatcaccaacacctaatttatttacttt 30641007  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  30641008 cttcttcttc 30641017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 9245438 - 9245328
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| |||||||||||  | ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9245438 ccaatttttataattttaatcccctaaaaaaagagaccgttggattgctgaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 9245339  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  9245338 cttcttcttcc 9245328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26364852 - 26364963
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||||||||  | |||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||| |||    
T  26364852 ccaattttgataattttaatcctctaaaaaaagagaccgttggattacagaggtctatcagattttataatgtatcaccaacacctaatttatttagttt 26364951  T
Q  101 cttcttcttccc 112  Q
    ||||||||||||    
T  26364952 cttcttcttccc 26364963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 522102 - 521993
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    ||||||||||||||||| |||||| ||||  | || ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  522102 aattttgataattttaatcccctagaaaaagagactgttggattacggaggtctatcaaattttatagtgtatcaccaacccctaatttatttactttct 522003  T
Q  103 tcttcttccc 112  Q
    ||||||||||    
T  522002 tcttcttccc 521993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41636942 - 41637051
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||| ||| |||||||||| |||||||||||  | |||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||    
T  41636942 ccaacttttataattttaatcccctaaaaaaagagaccgttggattacggaagtctatcagattttatcgtgtatcaccaacacctaatttatttacttt 41637041  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  41637042 cttcttcttc 41637051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 9244177 - 9244281
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| ||| |||||||  | ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9244177 caattttgataattttaatcccttaaaaaatgagaccgtaggattacggaggtctatcagattttatagtgtatcaccaacacctaatttatttattttc 9244276  T
Q  102 ttctt 106  Q
    |||||    
T  9244277 ttctt 9244281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 20309034 - 20309143
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||| | |||||| ||||  | |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20309034 ccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttacttt 20309133  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  20309134 cttcttcttc 20309143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21095667 - 21095776
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||| | |||||| ||||  | |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21095667 ccaattttgataattttgatcccctagaaaaagagaccgttggatcactgaggtctatcagattttatagtgtatcaccaatacctaatttatttacttt 21095766  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  21095767 cttcttcttc 21095776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 26366197 - 26366092
Alignment:
Q  5 ttttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    |||| |||||||||| |||||||||||  | |||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  26366197 ttttaataattttaatcccctaaaaaaaaagaccgttagattacggaggtctattagattttatagtgtatcaccaacacataatttatttactttcttc 26366098  T
Q  105 ttcttc 110  Q
    ||||||    
T  26366097 ttcttc 26366092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 34642778 - 34642874
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||| |||||||||||  ||||||||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34642778 aattttgataattttaatcccctaaaaaaa-aaaccgttggattgcggaggtctatcagattttatagtatatcaccaacatctaatttatttacttt 34642874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 30644711 - 30644601
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| || ||||||||  | |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||| |||    
T  30644711 ccaattttgataattttaatcctctaaaaaag-agaccgttggattacggaggtctatcaaattttataatggatcaccaacacctaatttatttagttt 30644613  T
Q  101 cttcttcttccc 112  Q
     |||||||||||    
T  30644612 tttcttcttccc 30644601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 20310058 - 20309950
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||| ||| || ||||  || |||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  20310058 caattttgataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttacttt 20309959  T
Q  101 cttcttctt 109  Q
    ||| |||||    
T  20309958 ctttttctt 20309950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 21096691 - 21096583
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaa-accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||||||||||||| ||| || ||||  || |||||||||||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||    
T  21096691 caattttgataattttaatcccttagaaaaaaaagaccgttggattatgaaggtctgtcagattttatagtgtatcacctacacctaacttatttacttt 21096592  T
Q  101 cttcttctt 109  Q
    ||| |||||    
T  21096591 ctttttctt 21096583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 43584519 - 43584629
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |   |||||||  | ||||||||||||| || ||||||||||||||||| |||||||||||   ||||||||||||||||    
T  43584519 ccaattttgataattttaatcttttaaaaaaagagaccgttggattacaaaagtctatcagattttataatgtatcaccaatgtctaatttatttacttt 43584618  T
Q  101 cttcttcttcc 111  Q
    |||||||||||    
T  43584619 cttcttcttcc 43584629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 22012298 - 22012357
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22012298 aggtctaccagattttatagtgtatcaccaacacctgatttatttactttcttcttcttc 22012357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 34643966 - 34643863
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||||||||||||||||| |||||||||||  | |||||||||||    |||||||||||||||||| | ||||||||||||||||||||||||   |||    
T  34643966 caattttgataattttaatcccctaaaaaa--agaccgttggattg---aggtctatcagattttatggcgtatcaccaacacctaatttatttggattc 34643872  T
Q  102 ttcttcttc 110  Q
    |||||||||    
T  34643871 ttcttcttc 34643863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 22013216 - 22013157
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22013216 aggtctaccagattttatagtgtatcaccaacacctgatttatttactttcatcttcttc 22013157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43585951 - 43585843
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    |||||||| |||||||||| ||  |||||||  | ||| |||||||| ||||||||| || |||||||||||||||| ||| |||||||||||||| |||    
T  43585951 ccaattttaataattttaatcctttaaaaaaa-agaccattggattatgaaggtctaccatattttatagtgtatcatcaatacctaatttatttatttt 43585853  T
Q  101 cttcttcttc 110  Q
    |||| |||||    
T  43585852 cttcatcttc 43585843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 41638159 - 41638070
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||| |||||||||| |||||||||||  | ||  |||||||||  ||||||||||  |||||||||||||||||||||||||||||    
T  41638159 ccaattttaataattttaatcccctaaaaaag-agacaattggattacagaggtctatcatgttttatagtgtatcaccaacacctaattt 41638070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 31203071 - 31203126
Alignment:
Q  46 tacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttc 101  Q
    |||| |||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  31203071 tacggaggtctatcaaattttataatgtatcaccaacacctaacttatttactttc 31203126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 3714493 - 3714443
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||||    
T  3714493 tctatcagatcttatagtgtatcaccaacacttgatttatttactttcttc 3714443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 43134025 - 43133976
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||| |||||||||||||||||||||||||| | |||||||||||||    
T  43134025 aggtctaccagattttatagtgtatcaccaacacttgatttatttacttt 43133976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 26365890 - 26365846
Alignment:
Q  199 catcaaattatgcttttaaaaacccaatcttcatgtcttcatctc 243  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  26365890 catcaaattatgcttttaaaaccccaatcttcatgtcttcttctc 26365846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 104
Target Start/End: Original strand, 3713206 - 3713256
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttc 104  Q
    ||||| |||| |||||||||||||| ||||| | |||||||||||||||||    
T  3713206 tctattagatcttatagtgtatcacaaacacttgatttatttactttcttc 3713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 94
Target Start/End: Original strand, 20066240 - 20066277
Alignment:
Q  57 atcagattttatagtgtatcaccaacacctaatttatt 94  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  20066240 atcagatttaacagtgtatcaccaacacctaatttatt 20066277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 35462949 - 35462905
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    ||||||||| ||| | | |||||||||||||||||||||||||||    
T  35462949 aggtctatctgatctaacagtgtatcaccaacacctaatttattt 35462905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16602836 - 16602945
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |||  ||||||  | |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16602836 ccaattttgataattttaatccctaaaaaaaaaagaccgttggattacggatgtctatcagattttacagtgtatcaccaacacctaatttatttacttt 16602935  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  16602936 cttcttcttc 16602945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 27892343 - 27892234
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| |    |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27892343 ccaattttgataattttaatcaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 27892244  T
Q  101 cttcttcttc 110  Q
     || ||||||    
T  27892243 ttttttcttc 27892234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 38243962 - 38243853
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | |||||||||  | || |||||||||| ||||| ||| |||||||| ||||||| ||||||||| ||||||||||||||    
T  38243962 ccaattttgataattttaatctcctaaaaaaagatactgttggattacaaaggtgtataagattttacagtgtattaccaacaccaaatttatttacttt 38243863  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  38243862 cttcttcttc 38243853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 27891242 - 27891326
Alignment:
Q  26 aaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||| || |||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27891242 aaaaaaacagaccgttagattacgaatgtctatcagattttccagtgtatcaccaacacctaatttatttactttcttcttcttc 27891326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23833078 - 23833165
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaa 88  Q
    ||||||||||||||||||| |||||||||||  | |||||||||||||| |||||||  |||||||||||||||||| ||||||||||    
T  23833078 ccaattttgataattttaatcccctaaaaaagaagaccgttggattacggaggtctagaagattttatagtgtatcatcaacacctaa 23833165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 38242994 - 38243096
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| | |||||||||  | ||||||||||||| |||   ||| |||||||||| ||||||||||||||| ||||||||||||||    
T  38242994 ccaattttgataattttaatctcctaaaaaaagagaccgttggattacaaag---tataagattttataatgtatcaccaacaccaaatttatttacttt 38243090  T
Q  101 cttctt 106  Q
    ||||||    
T  38243091 cttctt 38243096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 44800983 - 44801073
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||||||||||| || |||||||||||| | ||||||||||||   |||| || ||||||| | |||||||||||||||||| ||||    
T  44800983 ccaattttgataatttcaatcccctaaaaaacaagaccgttggattatagaggtttaccagatttcacagtgtatcaccaacacctgattt 44801073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 5033623 - 5033679
Alignment:
Q  54 tctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  5033623 tctaccagattttatagtgtatcaccaacatttaatttatttactttcttcatcttc 5033679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 16604166 - 16604107
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    ||||||| |||||||||||||||| |||||||||   |||||||||||||||||||||||    
T  16604166 aggtctaccagattttatagtgtaccaccaacactggatttatttactttcttcttcttc 16604107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 110
Target Start/End: Original strand, 370885 - 370982
Alignment:
Q  13 attttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||||||| ||||||||  | |||||||||| |   |||||||||| || | || |||||||||||||||||||||   ||||||||||| |||||    
T  370885 attttaaacctctaaaaaataagaccgttggataaatgaggtctatcaaatctaatggtgtatcaccaacacctaattatattactttcttcatcttc 370982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 5034792 - 5034743
Alignment:
Q  51 aggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||| ||||||||| |||||||||||||||| | |||||||||||||    
T  5034792 aggtctaacagattttagagtgtatcaccaacacttgatttatttacttt 5034743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 26388330 - 26388395
Alignment:
Q  2 caattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagatttta 67  Q
    |||||||||||||||||| ||| || ||||  | |||||| ||||||| |||||||||||||||||    
T  26388330 caattttgataattttaatcccatataaaaaaagaccgtttgattacggaggtctatcagatttta 26388395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 38593147 - 38593246
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat-ttactttcttcttctt 109  Q
    ||||||||||| ||| |||||  | |||||||||| | || | || ||||||| | |||||||||||||||||| |||||||| | ||||||||| ||||    
T  38593147 taattttaaactcctcaaaaagaagaccgttggataaaga-gatccatcagatctaatagtgtatcaccaacacttaatttatatcactttcttcatctt 38593245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 110
Target Start/End: Original strand, 38596743 - 38596842
Alignment:
Q  11 taattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttat-ttactttcttcttctt 109  Q
    ||||||||||| ||| |||||  | |||||||||| | || | || ||||||| | |||||||||||||||||| |||||||| | ||||||||| ||||    
T  38596743 taattttaaactcctcaaaaagaagaccgttggataaaga-gatccatcagatctaatagtgtatcaccaacacttaatttatatcactttcttcatctt 38596841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9269 - 9363
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttattta 96  Q
    ||||||||||| ||||||| |||||||||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9269 ccaattttgatgattttaatcccctaaaaaag-agaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaatttattta 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 31148 - 31234
Alignment:
Q  5 ttttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||| |||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31148 tttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattt 31234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35292 - 35202
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||| |||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  35292 ccaatttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 35202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 79520 - 79610
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||||||| |||||||||| ||||||||||| || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  79520 ccaatttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttacagtgtatcaccaacacctaattt 79610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 83664 - 83578
Alignment:
Q  5 ttttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaattt 91  Q
    |||| |||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  83664 tttttataattttaatcccctaaaaaaacagaccgttggattacggaggtctatcagattttatagtgtatcaccaacacctaattt 83578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1608 - 1499
Alignment:
Q  1 ccaattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||||||||||| ||| ||||||| || ||||||||||||   |||||||||||||||||  |||||| ||||||||||||||| ||||||||    
T  1608 ccaattttgataattttaatcccttaaaaaaacagaccgttggattatagaggtctatcagattttacggtgtataaccaacacctaatttttttacttt 1509  T
Q  101 cttcttcttc 110  Q
    ||||||||||    
T  1508 cttcttcttc 1499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1425; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 247 - 353
Alignment:
Q  3 aattttgataattttaaacccctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttct 102  Q
    |||||||||||||||||  || |||||||  | |||||||||||||  ||||||||||||||||| || |||||||||||||||||||| |||||||| |    
T  247 aattttgataattttaattccttaaaaaaagagaccgttggattacagaggtctatcagattttacagcgtatcaccaacacctaattt-tttactttat 345  T
Q  103 tcttcttc 110  Q
    || |||||    
T  346 tcatcttc 353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3034 - 2934
Alignment:
Q  1 ccaattttgataattttaaacc-cctaaaaaaccaaaccgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 99  Q
    ||||||||||||||||||| ||    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3034 ccaattttgataattttaatccaaaaaaaaaaacagaccgttagattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactt 2935  T
Q  100 t 100  Q
    |    
T  2934 t 2934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 110
Target Start/End: Original strand, 1914 - 1988
Alignment:
Q  36 accgttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||| ||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  1914 accgttagattacgaatgtctattagattttccagtgtatcaccaacacctaatttatttactttcttcttcttc 1988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 104405 - 104471
Alignment:
Q  44 attacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttactttcttcttcttc 110  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  104405 attacggaggtctatcagattttatagtgtatcaccaacatctaatttatttactttcttcttcttc 104471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 100
Target Start/End: Complemental strand, 25313 - 25252
Alignment:
Q  39 gttggattacgaaggtctatcagattttatagtgtatcaccaacacctaatttatttacttt 100  Q
    ||||||||||| |||| ||||| |||||||||||||| | ||||||||||||||||||||||    
T  25313 gttggattacggaggtttatcacattttatagtgtattatcaacacctaatttatttacttt 25252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 42968 - 42923
Alignment:
Q  50 aaggtctatcagattttatagtgtatcaccaacacctaatttattt 95  Q
    |||||| || |||||| | |||||||||||||||||||||||||||    
T  42968 aaggtccatgagatttaacagtgtatcaccaacacctaatttattt 42923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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