View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1910_high_64 (Length: 250)
Name: NF1910_high_64
Description: NF1910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1910_high_64 |
 | |
|
| [»] scaffold0807 (1 HSPs) |
| | |
|
| [»] scaffold0295 (1 HSPs) |
| | |
|
| [»] scaffold0041 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7119275 - 7119035
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7119275 |
ttcaagagtgaagctacttggaatgaactttgttgttcaccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
7119176 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7119175 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaaaaaagaagtgaaacatgtggaagaaaactgcacacaattga |
7119076 |
T |
|
| Q |
201 |
gactcttctcgaatcgtggatgtcttctttgctagtattat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7119075 |
gactcttctcgaatcgtggatgtcttctttgctagtattat |
7119035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 7131753 - 7131513
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7131753 |
ttcaagagtgaagctacttggaatgaactttgttgttcgccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
7131654 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
7131653 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaacaaagcagtgaaacatgtggaagaaaactgcacacaattga |
7131554 |
T |
|
| Q |
201 |
gactcttctcgaatcgtggatgtcttctttgctagtattat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7131553 |
gactcttctcgaatcgtggatgtcttctttgctagtattat |
7131513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 6402978 - 6402777
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
6402978 |
ttcaagagtgaagctacttggaataaactttgcagttccccaactagaagtgttgaacttgtcagatacgaaggttgatgatgaaacactctatgtgatc |
6402879 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| ||||||||| | ||||||||| |||||||| ||| |||||||||| |||||||| | || |||| |||||||||| ||||||||| |||||| ||| |
|
|
| T |
6402878 |
tcaaagaattgtagtgggcttttgaaactattattgagagattgttataatgtcacagaaaagggagcgaaacatgtgatagaaaactgtacacaactga |
6402779 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
6402778 |
ga |
6402777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6585218 - 6585419
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | ||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
6585218 |
ttcaagagtgaagctacttggaataaactttttagttacccagttggaggtattgaacttgtcagatacaaaggttgatgatgaaacactctatgtgatc |
6585317 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| |||| ||||| | ||||||||||||||||||||||| |||| | |||||||| |||| ||| |||||||||||| ||||| ||||||||| ||| |
|
|
| T |
6585318 |
tcaaagagttgttctgcgcttttggaactattactgaaaggttgtgaaaatgtcacagagaagggactgaaacatgtggtagaaatttgcacacaactga |
6585417 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
6585418 |
ga |
6585419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 6432273 - 6432078
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| ||||| ||||||||||||||||| |||| | ||||||||||||||||| ||||||||| ||| |
|
|
| T |
6432273 |
agtgaagctacatggaatgaactttgaagttcccaagctgaaggtgttgaacttgtcaaatacaagcgttgatgatgaaacactttatgtgatcttaaag |
6432174 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
|||||||| |||||| || ||||||| ||| | ||||| || |||||||| |||| |||||||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
6432173 |
aattgttgtgggcttctgcaactattcctgtacaattgtgataatgtcacacagaagggagtgaaacttgtggtagaaaaatgcacacaattgaga |
6432078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 6416078 - 6415889
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
||||||||||| ||||||| ||||||| |||||| | ||||||||||||||||||||| |||| |||||| ||||| |||| ||| |||||||||| ||| |
|
|
| T |
6416078 |
agtgaagctacatggaatggactttgtagttcccaacctggaggtgttgaacttgtcaaatacaaaggttaatgataaaactctctatgtgatctcaaag |
6415979 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|||||| ||||||||||| |||||||||| || |||| || |||||||| | |||||||||||||||| ||| |||||||||||| |
|
|
| T |
6415978 |
aattgtagcgggcttttgcaactattacttgaattttgtgataatgtcacagaagtgggagtgaaacatgtggtagagaactgcacacaa |
6415889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 22 - 202
Target Start/End: Original strand, 6603204 - 6603384
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggctt |
121 |
Q |
| |
|
|||||||||||| ||||| |||| |||||||| ||||| ||||||| ||||||||||||||| || ||| |||||| |||| |||| |||||| |
|
|
| T |
6603204 |
aatgaactttgtacttcccaagctacaggtgttggacttggcagatacaggtgttgatgatgaaacagtctatgcgatctcaaagagttgtcctgggctt |
6603303 |
T |
|
| Q |
122 |
ttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||| ||||| |
|
|
| T |
6603304 |
ttggaactattattgaaatattgttattatgtcacagagaaaggagtgaaacatgtggtagaaaactgcaaacaactgaga |
6603384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 196
Target Start/End: Original strand, 10579719 - 10579913
Alignment:
| Q |
3 |
caagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctc |
102 |
Q |
| |
|
|||||||||||| |||| |||| || |||| ||||||||||||||||||||||||||||| |||| || ||||||||| |||||||| || |||||| |
|
|
| T |
10579719 |
caagagtgaagcgacttagaataaagattgtaattccccagctggaggtgttgaacttgtcatatacaaaagttgatgataaaacactctattcgatctc |
10579818 |
T |
|
| Q |
103 |
gaagaattgttgcgggcttttggaacta-ttactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||| | ||| | ||||||||||| ||||| |||||||||| |||||||||||||||| |
|
|
| T |
10579819 |
aaagaattgttgtcggcttttggaactatttactgaaaaactgtaaaagggtcacaaagaagggagttaaacatgtggtagaaaactgcacacaa |
10579913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 6594587 - 6594788
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||||||||||||||| |||||| |||||| | |||||| | |||||||||||| |||||||| |||| ||||||||||||| ||||| | ||||||| |
|
|
| T |
6594587 |
ttcaagagtgaagctacatggaataaactttttagttcccaaactggaggtgttgtacttgtcaaatacagaggttgatgatgagacactacgtgtgatc |
6594686 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| ||||||||||| |||||||| ||||| ||| || ||||| || || ||||| || | |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
6594687 |
tcaaagaattgttgtgggcttttacaactaaaactagaaaattgtgatcatctcacagaggagggagccaaacatgtggtagaaaactgcacacaattga |
6594786 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
6594787 |
ga |
6594788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 6423329 - 6423134
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
||||||||||| || |||||||||| |||||| ||||||||||||||||||||||| |||| | ||| ||| |||||||| ||| |||||| ||| |
|
|
| T |
6423329 |
agtgaagctacgtgcaatgaacttttaagttcccaagctggaggtgttgaacttgtcaaatacaagagttagcgataaaacactctatgcgatctcaaag |
6423230 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
| |||||| ||| ||||| |||||||||| |||||||| ||||||| ||||| |||||| |||||| ||||| | ||||||||||||||||||| |
|
|
| T |
6423229 |
agttgttgtgggattttgcaactattacttgaagattgtgattatgtaacaaacaaaggactgaaacgtgtggtattaaactgcacacaattgaga |
6423134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 6394982 - 6394781
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||| |||||| |||| |||||||||||||| |||||| ||||||||||||||||||||||| |||| | |||||||||||||| || ||||||| |
|
|
| T |
6394982 |
ttcaaaagtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaacttgtcaaatacaagcgttgatgatgaaactctttctgtgatc |
6394883 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| ||||||||||| ||||||||| || || ||| | ||||| | |||||||| | || || ||| ||||||||| |||||||||||||||||||| |
|
|
| T |
6394882 |
tcaaagaattgttgtgggcttttgcaattacaacttgataattgtaaaaatgtcacagaaaagggtgtggaacatgtggtagaaaactgcacacaattga |
6394783 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
6394782 |
ga |
6394781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 192
Target Start/End: Original strand, 7994165 - 7994354
Alignment:
| Q |
3 |
caagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctc |
102 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||||| |||| |||||||||||| ||||| |||| | |||| |||| |||||||| |||||||||| |
|
|
| T |
7994165 |
caagagtgaagctactaggaatgaactttgtagttccgaagctagaggtgttgaacatgtcaaatacaagggttaatgacgaaacactatatgtgatctc |
7994264 |
T |
|
| Q |
103 |
gaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcac |
192 |
Q |
| |
|
|||||||||| || |||||| |||||||||| || |||| || |||| || || | |||||||||||||||| |||||||||||| |
|
|
| T |
7994265 |
aaagaattgttctggacttttgcaactattacttgaactttgtaatgatgttaccgaggagggagtgaaacatgtggtagaaaactgcac |
7994354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 6589310 - 6589497
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||| || ||| ||||| ||||||| || ||||||| || |
|
|
| T |
6589310 |
agtgaagctacttggaatgaactttgtagttcccatgctggaggtgttgaacttgtcaaatacaaatgttaatgataaaacactatatctgatctcaaaa |
6589409 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacac |
194 |
Q |
| |
|
|||||| |||||| || || ||| ||| || |||| |||||||||| || | |||||||||||||||| |||||||||||||| |
|
|
| T |
6589410 |
aattgtatagggcttatgcaattatcacttcaactttgtaattatgtcacggaggagggagtgaaacatgtggtagaaaactgcacac |
6589497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19632557 - 19632362
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||| ||| || ||||||||||| |||||| | |||||| |||| ||||||||| ||||||| |||| |||||||||||||| ||| ||||||| |
|
|
| T |
19632557 |
ttcaatagttaacctacttggaataaactttctagttcccaagctagaggtgttggacttgtcgtatacaaaggttgatgatgagcaactttttgtgatc |
19632458 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| ||||||||||| ||||||||| |||| ||||||||| ||||| | || ||||| |||| ||||||||||| |||| ||||||||||| |||| |
|
|
| T |
19632457 |
tcaaagaattgttgtgggcttttgcaactcttactgaaaaattgtgctaatatcacagagaagggagtgaaacacgtggtagaaaactgcaaacaa |
19632362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 6410118 - 6409932
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
||||||||||| |||||||||||||| |||||| ||||| |||||||||||| |||| |||| | |||||||||||||| || |||||||||| ||| |
|
|
| T |
6410118 |
agtgaagctacatggaatgaactttgaagttcccaagctgaaggtgttgaactagtcaaatacaagcgttgatgatgaaactctttatgtgatctcaaag |
6410019 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcaca |
193 |
Q |
| |
|
|||||||| |||||||| ||||||| || | | ||| || |||||||| |||| |||||||||||||||| | |||| |||||| |
|
|
| T |
6410018 |
aattgttgtcggcttttgcaactatttttgtacaactgtgataatgtcacacagaagggagtgaaacatgtggcaaaaaaatgcaca |
6409932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 14820811 - 14820617
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||| ||||||| |||| |||||| ||||||| |||||| || | |||||||||||||| ||| |||| ||||||||| |||||||||| || ||||| |
|
|
| T |
14820811 |
ttcaggagtgaaactacatggaattaactttgcagttcccaagttagaggtgttgaacttatcaaatacaaaggttgataatgaaacactttatatgatc |
14820712 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacaca |
195 |
Q |
| |
|
|| ||||||||||| ||||||||| | ||||||| || | ||| || |||||||| |||| || ||||||||||||| | ||||||||||||| |
|
|
| T |
14820711 |
tccaagaattgttgtgggcttttgcgattattacttgaaaaatgtaatgatgtcacagagaagggtgtgaaacatgtggtaaaaaactgcacaca |
14820617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 195
Target Start/End: Complemental strand, 14818487 - 14818306
Alignment:
| Q |
14 |
ctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgtt |
113 |
Q |
| |
|
|||| |||||| ||||||| |||| | || | |||||||||||||| ||| |||| ||||||||| |||||||||| || ||||||| |||||||||| |
|
|
| T |
14818487 |
ctacatggaattaactttgcagttctcaagttagaggtgttgaacttatcaaatacaaaggttgataatgaaacactttatatgatctccaagaattgtt |
14818388 |
T |
|
| Q |
114 |
gcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacaca |
195 |
Q |
| |
|
||||||||| | ||||||| || ||||| || |||||||| |||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
14818387 |
ctgggcttttgcgattattacttgaaaattgtaataatgtcacagagaagggtgtgaaacatgtagtagaaaactgcacaca |
14818306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 196
Target Start/End: Complemental strand, 6426622 - 6426434
Alignment:
| Q |
8 |
gtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaaga |
107 |
Q |
| |
|
||||| |||| |||||||||||||| |||||| |||||||||||||||| |||||| | || | ||||||||||||| | ||| |||||| |||| |
|
|
| T |
6426622 |
gtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaatttgtcaaacacaagcattgatgatgaaactttttatgcgatctcaaaga |
6426523 |
T |
|
| Q |
108 |
attgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
||||||| || ||||| || ||||||| || ||||| | |||||||| ||| || |||||||| |||| |||||||||||||||| |
|
|
| T |
6426522 |
attgttgtcggattttgcaattattacttgaaaattgtaaaggtgtcacaatgaagggtgtgaaacaagtggtagaaaactgcacacaa |
6426434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6596909 - 6597021
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||| ||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||| | | ||| |
|
|
| T |
6596909 |
ttcaagtgtgaagcgacttgaaataaactttgaaattccccagctggaggtgttgaacttgtcaagtacaaatgttgatgatgaaacactctacgctatc |
6597008 |
T |
|
| Q |
101 |
tcgaagaattgtt |
113 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
6597009 |
tcaaagaattgtt |
6597021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 14802439 - 14802331
Alignment:
| Q |
16 |
acttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgc |
115 |
Q |
| |
|
|||||||| ||||||| |||||| || |||| |||||||| |||||| |||| ||||||||||||||||||||| ||||||| || ||||||||||| |
|
|
| T |
14802439 |
acttggaactaactttgaagttcccaagatggaagtgttgaatttgtcaaatacaaaggttgatgatgaaacactctatgtgatttcaaagaattgttgt |
14802340 |
T |
|
| Q |
116 |
gggcttttg |
124 |
Q |
| |
|
|| |||||| |
|
|
| T |
14802339 |
ggtcttttg |
14802331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 6586112 - 6586284
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggctt |
121 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||||| | |||||| | || | ||| |||||||||||||| || |||||| |||| |||| ||||| |
|
|
| T |
6586112 |
aatgaactttgtacttcccaagctagaggtgttggatttgtcaaaaacagatgttcatgatgaaacactctgtgcgatctcaaagatttgtcctaggctt |
6586211 |
T |
|
| Q |
122 |
ttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|||||||||| ||||| || |||| ||| ||||| |||||||||||||| |||||| ||||||||| |||| |
|
|
| T |
6586212 |
ttggaactatcactgataggttgtgattgggtcac--agaaaggagtgaaagatgtggtgcaaaactgcaaacaa |
6586284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 9411455 - 9411338
Alignment:
| Q |
19 |
tggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcggg |
118 |
Q |
| |
|
|||| ||||||||| |||||| ||||||||||||||||||||||| |||| ||| ||||||| |||| ||| |||||| ||||||||| | || |
|
|
| T |
9411455 |
tggattgaactttgaggttcccaagctggaggtgttgaacttgtcatatacaggtgttttcgatgaaatactctatgagatctcaaagaattgtcgtgga |
9411356 |
T |
|
| Q |
119 |
cttttggaactattactg |
136 |
Q |
| |
|
|||||| |||| |||||| |
|
|
| T |
9411355 |
cttttgcaactgttactg |
9411338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 8913966 - 8914054
Alignment:
| Q |
2 |
tcaagagtgaagctacttggaatgaactttgttgttccccagctgga-ggtgttgaacttgtcagatacgaaggttgatgatgaaacac |
89 |
Q |
| |
|
||||||||||||||||||| ||| |||||||| |||||| || |||| |||||||| |||||| ||| || ||||||||||||||| |
|
|
| T |
8913966 |
tcaagagtgaagctacttgcaataaactttgtagttcccaagttggattgtgttgaatttgtcaaatatagagtttgatgatgaaacac |
8914054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 112
Target Start/End: Complemental strand, 28935146 - 28935056
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgt |
112 |
Q |
| |
|
|||||| |||| ||||||||| || |||||||||||||||||| |||| | ||||| |||||| ||||| |||||| || |||| |||| |
|
|
| T |
28935146 |
aatgaagtttgatgttccccaactcgaggtgttgaacttgtcacatacaagagttgacgatgaagcactcagtgtgatttcaaagagttgt |
28935056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11936256 - 11936457
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||||| ||||||||| | | ||||||||| |||||| | |||||||||||| |||||||| ||| | ||||| ||| || ||||| || |||| |
|
|
| T |
11936256 |
ttcaagactgaagctacgtacattgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttgacgataaatcactctattggatc |
11936355 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| |||| |||| | ||||||||| |||| | ||| ||| |||| | ||||||| | |||||||||| ||||||| ||||| ||||||||| ||| |
|
|
| T |
11936356 |
tcaaagagttgtagtgggcttttgcaactgtcacttaaattttgtgaaggtgtcacagacaaaggagtgacgcatgtggttgaaaaatgcacacaaatga |
11936455 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
11936456 |
ga |
11936457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 11948236 - 11948437
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||||| ||||||||| | | ||||||||| |||||| | |||||||||||| |||||||| ||| | ||||| ||| || ||||| || |||| |
|
|
| T |
11948236 |
ttcaagactgaagctacgtacattgaactttgaagttcccaaactggaggtgttggacttgtcatttacaagagttgacgataaatcactctattggatc |
11948335 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| |||| |||| | ||||||||| |||| | ||| ||| |||| | ||||||| | |||||||||| ||||||| ||||| ||||||||| ||| |
|
|
| T |
11948336 |
tcaaagagttgtagtgggcttttgcaactgtcacttaaattttgtgaaggtgtcacagacaaaggagtgacgcatgtggttgaaaaatgcacacaaatga |
11948435 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
11948436 |
ga |
11948437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 102; Significance: 9e-51; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 51764421 - 51764622
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||| || ||||||||| |||||||| ||| |||| |
|
|
| T |
51764421 |
ttcaagagtgaagctacttggaatgaactttgcagttccgaagctggaggtgttagacttgtcatttacaaaagttgatgataaaacactctatgcgatc |
51764520 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| ||||||||||||||||||||| ||||||||||| || ||||| || |||||| |||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
51764521 |
tcaaagaattgttgcgggcttttgcaactattactggaacattgtgataatgtcaaggagaagggagtgaaacatgtggttgaaaactgcacacaattga |
51764620 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
51764621 |
ga |
51764622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 13470719 - 13470907
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||| ||||| |||||||| || ||||||| ||| |
|
|
| T |
13470719 |
agtgaagctacttggaatgaactttgttgttcccaatctggaggtgttgaacttgtcaaatacaaaggttaatgataaaacactctatatgatctcaaag |
13470818 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacaca |
195 |
Q |
| |
|
|||||||| ||||||||| |||||||||| || |||| || |||||||| | | |||||||||||||||| ||| ||||||||||| |
|
|
| T |
13470819 |
aattgttgtgggcttttgcaactattacttgaactttgtcataatgtcacagaagagggagtgaaacatgtggtagagaactgcacaca |
13470907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 193
Target Start/End: Original strand, 51113770 - 51113954
Alignment:
| Q |
9 |
tgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaa |
108 |
Q |
| |
|
|||||||||||||||||||||||| | |||| | ||||||||||| |||||||| |||| | ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
51113770 |
tgaagctacttggaatgaactttgaagctcccaaactggaggtgttagacttgtcaaatacaatggttgatgatgaaacactctatgtgatctcgaagag |
51113869 |
T |
|
| Q |
109 |
ttgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcaca |
193 |
Q |
| |
|
|||||| ||||||||| |||| ||||||||| ||||||| |||||||| |||| |||||||| ||||||| |||||| |||||| |
|
|
| T |
51113870 |
ttgttgtgggcttttgcaactgttactgaaaaattgttaccatgtcacagagaagggagtgaagcatgtggtagaaaaatgcaca |
51113954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 51120874 - 51121075
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| || | |||||||||||||| |||| | | ||||||||||||||||||| |||| | ||||||||||||| ||| |||| ||| |
|
|
| T |
51120874 |
ttcaagagtgaaactgcatggaatgaactttgaagttctcaaattggaggtgttgaacttgtcgcatacaagagttgatgatgaaaaactatatgtaatc |
51120973 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattact-gaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattg |
199 |
Q |
| |
|
|| |||| |||| | ||||||||| || | | || ||||| | ||| ||||||||| | ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
51120974 |
tcaaagagttgtcgtgggcttttgcaattgtctctagaaagct-gtttgtatgtcacacaaaaaggagtgaaacatgtggtagaaaactgcacacaattg |
51121072 |
T |
|
| Q |
200 |
aga |
202 |
Q |
| |
|
||| |
|
|
| T |
51121073 |
aga |
51121075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 194
Target Start/End: Original strand, 514788 - 514902
Alignment:
| Q |
80 |
gatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtgg |
179 |
Q |
| |
|
|||||| |||| |||||||||||||||| ||| || ||||||||| ||||||||||| || ||||| | | ||||| ||| |||||||| ||||||| |
|
|
| T |
514788 |
gatgaagcacttcatgtgatctcgaagagttgctgtgggcttttgcaactattactgcaaaattgtgaaggtatcacagagacgggagtgaagcatgtgg |
514887 |
T |
|
| Q |
180 |
aagaaaactgcacac |
194 |
Q |
| |
|
|||||||||||| |
|
|
| T |
514888 |
tgaaaaactgcacac |
514902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 102; Significance: 9e-51; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 19468480 - 19468681
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |
|
|
| T |
19468480 |
ttcaagagtgaatctacttggagtgaactttgtagttcccaagctggaggtgttgaagttgtcagatacaaaggttgatgatgaaacactttatgtgatc |
19468579 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattga |
200 |
Q |
| |
|
|| ||||| ||||| || ||||||||| |||| || | | |||| || |||||||| |||||||||||||||||||| ||||||| ||| ||||| ||| |
|
|
| T |
19468580 |
tcaaagaactgttgtggacttttggaattatttgtggacggttgtaatgatgtcacagagaaaggagtgaaacatgtgaaagaaaattgctcacaactga |
19468679 |
T |
|
| Q |
201 |
ga |
202 |
Q |
| |
|
|| |
|
|
| T |
19468680 |
ga |
19468681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 196
Target Start/End: Complemental strand, 9581148 - 9580992
Alignment:
| Q |
42 |
agctggaggtgttgaacttgtcagatacgaag--gttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaa |
139 |
Q |
| |
|
|||| |||||||||||||||||| ||| || ||| |||||||||| || |||||||||| ||||||||| | || |||||| || ||||||||| |
|
|
| T |
9581148 |
agctagaggtgttgaacttgtcatgtacaaaaaagttaatgatgaaacgctttatgtgatctcaaagaattgtcgtggacttttgtgccttttactgaaa |
9581049 |
T |
|
| Q |
140 |
gattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
||| ||||| ||||||||| || |||||||| | ||||| |||||| ||||||||| |
|
|
| T |
9581048 |
gatagttatggtgtcacaaacaatggagtgaagcgtgtggtagaaaattgcacacaa |
9580992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 195
Target Start/End: Complemental strand, 9586716 - 9586563
Alignment:
| Q |
42 |
agctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaaga |
141 |
Q |
| |
|
|||| |||||||||||||||||| |||| | ||| ||||||||||||| |||||| ||| | ||||||| | || |||||| | || |||| |||| | |
|
|
| T |
9586716 |
agctagaggtgttgaacttgtcatatacagatgttaatgatgaaacactttatgtgacctcaatgaattgtcgtggacttttgcatcttttacagaaaaa |
9586617 |
T |
|
| Q |
142 |
ttgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacaca |
195 |
Q |
| |
|
||||||| ||||||||| || ||| |||| | ||||| |||||| |||||||| |
|
|
| T |
9586616 |
ttgttatcatgtcacaagcaatggattgaagcgtgtggtagaaaattgcacaca |
9586563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 192
Target Start/End: Complemental strand, 7554554 - 7554415
Alignment:
| Q |
53 |
ttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatg |
152 |
Q |
| |
|
|||||||| ||| |||| | |||||||||||| ||||| || ||||||| |||| |||| | || ||||| |||| |||||||||| ||| || ||| |
|
|
| T |
7554554 |
ttgaacttatcatatacaagtgttgatgatgaagcactctatatgatctcaaagagttgtggtggacttttacaactgttactgaaaggatgtgataatg |
7554455 |
T |
|
| Q |
153 |
tcacaaagaaaggagtgaaacatgtggaagaaaactgcac |
192 |
Q |
| |
|
||||| | || |||||||| ||||||| |||||||||||| |
|
|
| T |
7554454 |
tcacagaaaagggagtgaagcatgtggtagaaaactgcac |
7554415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 43635010 - 43634914
Alignment:
| Q |
16 |
acttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgt |
112 |
Q |
| |
|
||||||||||| |||| || |||||||| |||| ||||||||||||| |||| |||||||| |||| |||||| |||||| ||| ||||||||| |
|
|
| T |
43635010 |
acttggaatgacctttagagtcccccagctagaggcgttgaacttgtcatatacaaaggttgacgatggaacactttatgtgacctcaaagaattgt |
43634914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 52082655 - 52082586
Alignment:
| Q |
45 |
tggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttg |
114 |
Q |
| |
|
|||||||||||||||||||| | || || |||||||||||||| | |||||||||| |||| |||||| |
|
|
| T |
52082655 |
tggaggtgttgaacttgtcaaagacaaaaattgatgatgaaacattgtatgtgatctcaaagagttgttg |
52082586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 7 - 202
Target Start/End: Complemental strand, 10614705 - 10614510
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
10614705 |
agtgaagctacttggaatgaacgttgttgttcccaatctggaggtgttgaacttgtcaaatacgaaggttaatgataaaacactctatgtgatctcgaag |
10614606 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
|| ||| | ||||||||| |||||||||| || || | || |||||||| | |||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
10614605 |
aactgtagtgggcttttgcaactattacttgaactttctcataatgtcacagaagaaggagtgaaacatgtggtagaaaactgcatgcaattgaga |
10614510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 8 - 202
Target Start/End: Original strand, 15092139 - 15092333
Alignment:
| Q |
8 |
gtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaaga |
107 |
Q |
| |
|
||||| |||| |||||||||||||| |||||| |||||||||||||||| |||||||| || |||||| ||||| |||||||| ||| |||||| |||| |
|
|
| T |
15092139 |
gtgaaactacatggaatgaactttgcagttcccgagctggaggtgttgaatttgtcagaaacaaaggttaatgataaaacactctatgcgatctcaaaga |
15092238 |
T |
|
| Q |
108 |
attgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
||||||| ||||||||| |||||||||| || ||||||| |||||||| | ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15092239 |
attgttgtgggcttttgcaactattacttgaattttgttataatgtcacagaagtgggagtgaaacatgtgctagaaaactgcacacaattgaga |
15092333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 10170145 - 10170262
Alignment:
| Q |
84 |
aaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaaga |
183 |
Q |
| |
|
|||||||| |||||||||| ||| ||||||| || |||||| ||||||| |||| ||||| || |||||||| |||||||||||||||||||| |||| |
|
|
| T |
10170145 |
aaacactctatgtgatctcaaagtattgttgtggacttttgaaactatttgtgaacaattgtaatgatgtcacagagaaaggagtgaaacatgtgaaaga |
10170244 |
T |
|
| Q |
184 |
aaactgcacacaattgag |
201 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
10170245 |
aaactgctcacaactgag |
10170262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 10177670 - 10177787
Alignment:
| Q |
84 |
aaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaaga |
183 |
Q |
| |
|
|||||||| |||||||||| ||| ||||||| || |||||| ||||||| |||| ||||| || |||||||| |||||||||||||||||||| |||| |
|
|
| T |
10177670 |
aaacactctatgtgatctcaaagtattgttgtggacttttgaaactatttgtgaacaattgtaatgatgtcacagagaaaggagtgaaacatgtgaaaga |
10177769 |
T |
|
| Q |
184 |
aaactgcacacaattgag |
201 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
10177770 |
aaactgctcacaactgag |
10177787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 23)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 53761753 - 53761945
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| |||||| |||| |||| ||||||||||||| |||||| ||| | ||| |||||||| ||||||| |
|
|
| T |
53761753 |
ttcaagagtgaagctaattggaatgaactttgtagttcccaagctagaggcgttgaacttgtcatttacgaaagttaacgataaaacactc--tgtgatc |
53761850 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|||||||||||| | ||||||||| || ||||||||||| ||||| || ||||||| | || ||||||||||||||||||||||||||||||||| |
|
|
| T |
53761851 |
tcgaagaattgtcgtgggcttttgcaa-tattactgaaacattgtgataatgtcacggacaagggagtgaaacatgtggaagaaaactgcacacaa |
53761945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 45 - 191
Target Start/End: Complemental strand, 640989 - 640843
Alignment:
| Q |
45 |
tggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattg |
144 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||||||||||||| | |||| ||| |||||||| | || |||||| | || |||||| ||||||| |
|
|
| T |
640989 |
tggaggtgttgaacttgtcagatacaaacgttgatgatgaaacactctacgtgacctcaaagaattgccgtggtcttttgcatctgttactggaagattg |
640890 |
T |
|
| Q |
145 |
ttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgca |
191 |
Q |
| |
|
| ||||||| |||||||| |||||||| ||||||| ||||||||||| |
|
|
| T |
640889 |
tcattatgtaacaaagaagggagtgaatcatgtggtagaaaactgca |
640843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 7 - 193
Target Start/End: Complemental strand, 547025 - 546839
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaag |
106 |
Q |
| |
|
|||||| ||| ||||||||||||||| ||||| | |||||||| ||||||||||| ||| | || |||||||||||||| |||||||||| ||| |
|
|
| T |
547025 |
agtgaacctatttggaatgaactttgaagttcctaaattggaggtggtgaacttgtcacgtacaattgtcaatgatgaaacactctatgtgatctcaaag |
546926 |
T |
|
| Q |
107 |
aattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcaca |
193 |
Q |
| |
|
| |||||| |||||||||||| | |||||| |||| |||| | |||||||| |||| ||||||||||||||| ||||||||||||| |
|
|
| T |
546925 |
agttgttgtgggcttttggaattgttactggaagaatgttttcatgtcacagagaagggagtgaaacatgtgctagaaaactgcaca |
546839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 1548410 - 1548594
Alignment:
| Q |
7 |
agtgaagctactt-ggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaa |
105 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||||| | ||||||||||||||||||||| |||| | ||||||||||||||||| |||||||||| || |
|
|
| T |
1548410 |
agtgaagctactttggactgaactttgaaattcccaaactggaggtgttgaacttgtcacatacaagtattgatgatgaaacactcaatgtgatctcaaa |
1548509 |
T |
|
| Q |
106 |
gaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgc |
190 |
Q |
| |
|
|| |||||| ||||||||| | | |||| ||| |||| | || ||||| |||| |||||||||||| | |||||||||||| |
|
|
| T |
1548510 |
gagttgttgtgggcttttgcacttgttacaaaaacgttgtaaaaatatcacagagaagggagtgaaacatatagaagaaaactgc |
1548594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 55908709 - 55908904
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| |||||| |||| |||||| ||||| | | |||||||| ||||||||| |||| |||||||||||||||||| || ||||| |
|
|
| T |
55908709 |
ttcaagagtgaaactacttagaataaactttaaagttcctgaattagaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatc |
55908808 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| ||||||||||| |||||||| |||| || ||| || ||||| || | |||||| |||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
55908809 |
tcaaagaattgttgtgggcttttacaactgtttctggaaaattgtgatgaagtcacagagaatggtgtgaaacatgtagtcgaaaactgcacacaa |
55908904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 532307 - 532196
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| || ||| |||| |||||||||||||||||| |||| || |||||||||||| || |||||| | |
|
|
| T |
532307 |
ttcaagagtgaatctacttggaatgaactttgaagtccccaagctagaggtgttgaacttgtcatatacaaacattgatgatgaaaagctttatgtgacc |
532208 |
T |
|
| Q |
101 |
tcgaagaattgt |
112 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
532207 |
tcaaagaattgt |
532196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 55505089 - 55505281
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||| |||||| ||| |||||||||||||| || ||||| || |||||||||||||||||| |||| |||||||| |||| |||||| |||||| | |
|
|
| T |
55505089 |
ttcaacagtgaacctaattggaatgaactttagagtcccccaactagaggtgttgaacttgtcatatacaaaggttgacgatggaacactttatgtgacc |
55505188 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| ||||||||| | || |||||| | | ||| ||||| || | |||||||| |||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
55505189 |
tcaaagaattgtcgtggacttttgcatttgttattgaaaaatag---cgatgtcacagagaagggagtgaaacacgtgttagaaaactgcacacaa |
55505281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 1552757 - 1552871
Alignment:
| Q |
10 |
gaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaat |
109 |
Q |
| |
|
||||||||||||| ||||||||| ||||| | ||||| |||||||| |||||| |||| || || |||||||||||||| ||||||| || |||||| |
|
|
| T |
1552757 |
gaagctacttggactgaactttgaaattcccaaactggaagtgttgaatttgtcacatacaaatattaatgatgaaacactcaatgtgatatcaaagaat |
1552856 |
T |
|
| Q |
110 |
tgttgcgggcttttg |
124 |
Q |
| |
|
||| | ||||||||| |
|
|
| T |
1552857 |
tgtcgtgggcttttg |
1552871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 196
Target Start/End: Complemental strand, 553554 - 553402
Alignment:
| Q |
44 |
ctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagatt |
143 |
Q |
| |
|
||||||||||||||||||||| ||| | |||||||||||| |||| ||||||| || |||| ||||| ||||||||| |||| || || ||| |
|
|
| T |
553554 |
ctggaggtgttgaacttgtcatttacaagagttgatgatgaagcacttaatgtgatttcaaagagttgttctgggcttttgcaactgttgttgttttatt |
553455 |
T |
|
| Q |
144 |
gttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| | |||||||| | ||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
553454 |
gtagtgatgtcacagataaaggagtgaatcatgtggtagaaaactgcacacaa |
553402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 201
Target Start/End: Complemental strand, 570468 - 570269
Alignment:
| Q |
2 |
tcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatct |
101 |
Q |
| |
|
|||| |||||| || | |||| ||||||||| |||| | | || |||||||||||||||||| |||| |||||| | ||| |||| || |||| | |
|
|
| T |
570468 |
tcaaaagtgaaactgcgtggattgaactttgaagttctcaaactcgaggtgttgaacttgtcatatacaggagttgataacgaagaactctatctgattt |
570369 |
T |
|
| Q |
102 |
cgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgag |
201 |
Q |
| |
|
| |||| |||| ||||||||||| |||| ||||| | ||||||||||||| || || | ||| ||||| ||||||| |||||||||||||||| |||| |
|
|
| T |
570368 |
caaagagttgtcgcgggcttttgcaactgttacttgagcattgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgag |
570269 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 202
Target Start/End: Original strand, 1513407 - 1513586
Alignment:
| Q |
20 |
ggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggc |
119 |
Q |
| |
|
||||||||||||| |||||| | || || ||||||||||||||| ||| || |||||||||||||||||| | || ||||| ||| |||| | |||| |
|
|
| T |
1513407 |
ggaatgaactttgaagttcccaaactagaagtgttgaacttgtcatttacaaatgttgatgatgaaacactctacgtaatctcaaagtgttgtcgtgggc |
1513506 |
T |
|
| Q |
120 |
ttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
||||| |||| ||||||||| ||| ||| ||||||| ||| |||||||| | |||| |||||| ||||||||| ||||| |
|
|
| T |
1513507 |
ttttgcaactcatactgaaaggttg-tat--tgtcacagagatgggagtgaagcttgtgctagaaaaatgcacacaactgaga |
1513586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 1524485 - 1524665
Alignment:
| Q |
19 |
tggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcggg |
118 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||| |||||| ||| | |||||||||||||||||| || ||||||| ||| |||| | ||| |
|
|
| T |
1524485 |
tggaatgaactttgaagttcccaatttggaggtgttgaatttgtcacgtacaagtgttgatgatgaaacactctatatgatctcacagagttgtcgtggg |
1524584 |
T |
|
| Q |
119 |
cttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
|||||| |||| ||| || | ||| |||||||||| ||| |||||||| ||||| |||||||||||||||| ||||| |
|
|
| T |
1524585 |
cttttgcaactgttattg---cgtagttgttatgtcacagagaggggagtgaattatgtgatagaaaactgcacacaactgaga |
1524665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 201
Target Start/End: Complemental strand, 7307934 - 7307778
Alignment:
| Q |
45 |
tggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattg |
144 |
Q |
| |
|
||||||| |||||||||||| |||| | |||||||||||| |||| | | ||||||| |||| |||||| |||||||| | || |||||| ||| ||| |
|
|
| T |
7307934 |
tggaggtattgaacttgtcatatacagaagttgatgatgaagcactacgtatgatctcaaagagttgttgtaggcttttgcacctgttactggaaggttg |
7307835 |
T |
|
| Q |
145 |
ttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgag |
201 |
Q |
| |
|
|| | |||||| | || ||| |||| ||||||| |||||||||||| ||| |||| |
|
|
| T |
7307834 |
ttttattgtcacgatgactggattgaagcatgtggtagaaaactgcacgcaactgag |
7307778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 8184031 - 8184155
Alignment:
| Q |
21 |
gaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggct |
120 |
Q |
| |
|
|||||||||||| ||||| | || |||||||||||||||||| |||| | ||||||||| | ||||| ||| ||||| |||| |||||| ||||| |
|
|
| T |
8184031 |
gaatgaactttgaagttccgaaactagaggtgttgaacttgtcacatacaagagttgatgatatagcactctatgcaatctcaaagagttgttgtgggct |
8184130 |
T |
|
| Q |
121 |
tttggaactattactgaaagattgt |
145 |
Q |
| |
|
||||||||| |||||| || ||||| |
|
|
| T |
8184131 |
tttggaactgttactggaaaattgt |
8184155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 370958 - 370843
Alignment:
| Q |
81 |
atgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtgga |
180 |
Q |
| |
|
||||| |||| ||||||||||| |||| |||||| |||||||| ||||||||||| || ||||| | | ||||||||| |||||||| ||||||| |
|
|
| T |
370958 |
atgaagcacttcatgtgatctcaaagagttgttgtcggcttttgcaactattactgcaaaattgtgaaggtatcacaaagatgggagtgaagcatgtggt |
370859 |
T |
|
| Q |
181 |
agaaaactgcacacaa |
196 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
370858 |
gaaaaactgcacacaa |
370843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 202
Target Start/End: Complemental strand, 558542 - 558415
Alignment:
| Q |
75 |
ttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaaca |
174 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| |||| | |||||||||||||| | || || |||| || || ||| | ||||||||||| || |
|
|
| T |
558542 |
ttgatgatgaagcactccatgtgatctcaaagagttgtcgtgggcttttggaactgtatcttcaattttgtatttgcgttacagataaaggagtgaagca |
558443 |
T |
|
| Q |
175 |
tgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
|||| |||||||||||||||| ||||| |
|
|
| T |
558442 |
tgtgctagaaaactgcacacaaatgaga |
558415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 196
Target Start/End: Original strand, 12121458 - 12121633
Alignment:
| Q |
21 |
gaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggct |
120 |
Q |
| |
|
|||||||||||| |||||| | || || ||||||||||||||| |||| || |||||||||||||||||| || ||||| ||| ||| | ||||| |
|
|
| T |
12121458 |
gaatgaactttgaagttcccaaactagaagtgttgaacttgtcatatacaaatgttgatgatgaaacactctccgtaatctcaaagtgttgccgtgggct |
12121557 |
T |
|
| Q |
121 |
tttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|||| |||| | |||| || || | || ||||||| ||| |||||||| ||||||| |||||| ||||||||| |
|
|
| T |
12121558 |
tttgcaactctcactggaatggtgcttttttgtcacagagatgggagtgaagcatgtggtagaaaaatgcacacaa |
12121633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 192
Target Start/End: Original strand, 1537757 - 1537939
Alignment:
| Q |
10 |
gaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaat |
109 |
Q |
| |
|
|||||| | |||||||||||||| |||||| | || || ||||||||||||||| |||| || ||| |||| ||||||| ||| ||||| ||| | |
|
|
| T |
1537757 |
gaagctgcatggaatgaactttgaagttcccaaactagaagtgttgaacttgtcatatacaaatgttaatgacaaaacactgtgtgtaatctcaaagtgt |
1537856 |
T |
|
| Q |
110 |
tgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcac |
192 |
Q |
| |
|
||| | ||||||||| |||| |||||| || ||||||| ||||||| |||| |||||||| ||||| |||||| ||||| |
|
|
| T |
1537857 |
tgtcgtgggcttttgcaacttttactggaactttgttatcttgtcacacagaagggagtgaagtatgtgctagaaaaatgcac |
1537939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 1519143 - 1519224
Alignment:
| Q |
21 |
gaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctc |
102 |
Q |
| |
|
|||||||||||| |||||| | || |||||||||||||||||| |||| | ||||||||| || ||||| |||||||||| |
|
|
| T |
1519143 |
gaatgaactttgaagttcccaaactagaggtgttgaacttgtcacatacaagggttgatgaataagcactctatgtgatctc |
1519224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 21834365 - 21834423
Alignment:
| Q |
7 |
agtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcag |
65 |
Q |
| |
|
||||||||||| | | || |||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
21834365 |
agtgaagctacatagtatcaactttgtagttcccaagctggaggtgttggacttgtcag |
21834423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 1508033 - 1508073
Alignment:
| Q |
50 |
gtgttgaacttgtcagatacgaaggttgatgatgaaacact |
90 |
Q |
| |
|
||||||||||||||| |||| || ||||||||||||||||| |
|
|
| T |
1508033 |
gtgttgaacttgtcacataccaatgttgatgatgaaacact |
1508073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 6006304 - 6006244
Alignment:
| Q |
142 |
ttgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
||||||| ||||||||||||| ||||||| || || | ||||||||||| |||||||||| |
|
|
| T |
6006304 |
ttgttatgatgtcacaaagaagggagtgatgcaagtcgtagaaaactgcaaacaattgaga |
6006244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 8187115 - 8187195
Alignment:
| Q |
44 |
ctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttg |
124 |
Q |
| |
|
||||||||||||||||||||| |||| | ||||||||| ||||||| ||| || || |||| |||||| ||||||||| |
|
|
| T |
8187115 |
ctggaggtgttgaacttgtcacatacaagagttgatgataaaacactttatgcaatttcaaagagttgttgtgggcttttg |
8187195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 20478066 - 20478264
Alignment:
| Q |
4 |
aagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcg |
103 |
Q |
| |
|
||||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| |||| || |||||||| |||||| | ||||||||| |
|
|
| T |
20478066 |
aagagcgaagctacttggaataaacgttgtaattccccagctggaggtgttgaacttgtcatatacaaatgttgatgacgaaacattatctgtgatctca |
20478165 |
T |
|
| Q |
104 |
aagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
| ||||||||| ||||||||| || || |||||||| |||| || ||||||||| |||||||| ||||||||| | |||||||||||||||| ||||| |
|
|
| T |
20478166 |
aggaattgttgtgggcttttgcaaatactactgaaaaattgcgataatgtcacaatgaaaggagcgaaacatgtcgtagaaaactgcacacaactgaga |
20478264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 41889535 - 41889713
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||| |||||||||||||| |||||||||| |||||| | |||||||||||||||| ||| |||| || ||||||||||||||||| || |||| |
|
|
| T |
41889535 |
ttcaatagtgaagctacttgaaatgaactttaaagttcccaaattggaggtgttgaacttatcatatacaaaagttgatgatgaaacactttataagatc |
41889634 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtgg |
179 |
Q |
| |
|
|| |||| |||||||||||||| | || | ||||| ||| |||||||| ||||||||||||| |||||||| ||||||| |
|
|
| T |
41889635 |
tcaaagagttgttgcgggctttcgaaattgttacttaaaaattgttatgatgtcacaaagaagggagtgaatcatgtgg |
41889713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 202
Target Start/End: Original strand, 41901550 - 41901717
Alignment:
| Q |
35 |
gttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattac |
134 |
Q |
| |
|
|||||| | ||||||||||||||||||||| |||| || |||||||||||| |||| || ||||||| |||| |||||| || |||||| || | | || |
|
|
| T |
41901550 |
gttcccaaactggaggtgttgaacttgtcatatacaaaagttgatgatgaagcactttatatgatctcaaagagttgttgtggacttttgaaattgtcac |
41901649 |
T |
|
| Q |
135 |
tgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
| |||||||| || ||||||||||||| |||||||| ||||||| ||||||||| || ||||||||| |
|
|
| T |
41901650 |
ttcaagattgtaatgatgtcacaaagaagggagtgaagcatgtggtagaaaactgtacgcaattgaga |
41901717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 192
Target Start/End: Complemental strand, 32267572 - 32267402
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggctt |
121 |
Q |
| |
|
||||||||||| |||||| | ||||||| |||||||||||| | || | |||||||||||| |||| || ||||||| |||| |||||| |||||| |
|
|
| T |
32267572 |
aatgaactttgaagttcccaaattggaggtattgaacttgtcacaaacaatagttgatgatgaagcactttatatgatctcaaagagttgttgtgggctt |
32267473 |
T |
|
| Q |
122 |
ttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcac |
192 |
Q |
| |
|
||| || | | ||| ||| ||||| || || |||||||||| |||||||| ||||| | |||||||||||| |
|
|
| T |
32267472 |
ttgaaattgtcacttaaaaattgtaatgatatcacaaagaagggagtgaagcatgtagtagaaaactgcac |
32267402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 17205600 - 17205527
Alignment:
| Q |
118 |
gcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgca |
191 |
Q |
| |
|
||||||| | ||| ||||| || ||||| || |||||||| | |||||| |||||||||||| ||||||||||| |
|
|
| T |
17205600 |
gcttttgcatctaatactggaacattgtaatgatgtcacagaaaaaggattgaaacatgtggtagaaaactgca |
17205527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 196
Target Start/End: Original strand, 45245112 - 45245261
Alignment:
| Q |
47 |
gaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgtt |
146 |
Q |
| |
|
||||||||||| |||||||| || | |||||||||||||||||||||||||||||| |||| |||| | ||||||||| |||||||| ||||| | |||| |
|
|
| T |
45245112 |
gaggtgttgaatttgtcagagacaatggttgatgatgaaacactccatgtgatctcaaagagttgtcgtgggcttttgcaactattattgaaaaaatgtt |
45245211 |
T |
|
| Q |
147 |
attatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| |||||||| | || |||||||||||||||| |||||| ||||||||| |
|
|
| T |
45245212 |
atcatgtcacagataagggagtgaaacatgtggtagaaaattgcacacaa |
45245261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 1037645 - 1037840
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| |||||| |||| |||||| ||||| | | |||||||| ||||||||| |||| |||||||||||||||||| || ||||| |
|
|
| T |
1037645 |
ttcaagagtgaaactacttagaataaactttaaagttcctgaattagaggtgtttaacttgtcacatacatgtgttgatgatgaaacactctatatgatc |
1037744 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| ||||||||||| |||||||| |||| || ||| || ||||| || | |||||| |||| || ||||||||||| | ||||||||||||||| |
|
|
| T |
1037745 |
tcaaagaattgttgtgggcttttacaactgtttctggaaaattgtgatgaagtcacagagaatggtgtgaaacatgtagtcgaaaactgcacacaa |
1037840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 7)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 18315254 - 18315449
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
||||||| ||||||||| ||||||||||||| |||||| | ||||||||||||||||||||| |||| || |||||||||||| ||||| |||||||| |
|
|
| T |
18315254 |
ttcaagaatgaagctacgtggaatgaactttaaagttcccaaactggaggtgttgaacttgtcacatacaaaagttgatgatgaagcactctatgtgatc |
18315353 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|| |||| |||| | |||||||| |||| ||| || || |||| | |||||||| ||||||||| || |||||| |||||||||||||||| |
|
|
| T |
18315354 |
tcaaagagttgtcgtaggcttttgcaactgttattggaacgctgttgtgatgtcacagagaaaggagaaaagtatgtggtagaaaactgcacacaa |
18315449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 27922605 - 27922425
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggctt |
121 |
Q |
| |
|
||||||||||| |||||| | |||||||||||||||||||| |||| || |||||||||||| |||| || ||||||| |||| |||||| |||||| |
|
|
| T |
27922605 |
aatgaactttgaagttcccaaattggaggtgttgaacttgtcatatacaaatgttgatgatgaagcactttatatgatctcaaagagttgttgtgggctt |
27922506 |
T |
|
| Q |
122 |
ttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
||| || | | ||| || ||||| || || |||||||||| |||||||| ||||||| |||||||||||| ||| ||||| |
|
|
| T |
27922505 |
ttgaaattgtcacttgaaaattgtaatgatttcacaaagaagggagtgaaccatgtggtagaaaactgcactcaactgaga |
27922425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 17628039 - 17628129
Alignment:
| Q |
45 |
tggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattact |
135 |
Q |
| |
|
|||||||||||||||||||| |||| | ||||||||| || |||||| ||||||||| |||||||||| ||||| ||| |||||||||| |
|
|
| T |
17628039 |
tggaggtgttgaacttgtcacatactagagttgatgataaagcactccgtgtgatctcaaagaattgttttgggctcttgaaactattact |
17628129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 21235658 - 21235476
Alignment:
| Q |
19 |
tggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcggg |
118 |
Q |
| |
|
|||| ||||||||| |||||| | ||||||||||||||||||||| |||| |||||| | ||| |||| || |||| || |||| ||| || || |
|
|
| T |
21235658 |
tggagtgaactttgaagttcccaaactggaggtgttgaacttgtcatatacaggagttgataacgaagaactctatttgatttcaaagagctgtcgcagg |
21235559 |
T |
|
| Q |
119 |
cttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgag |
201 |
Q |
| |
|
|||||| |||| ||||| | |||||||||||||||| || | ||| ||||| ||||||| |||||||||||||||| |||| |
|
|
| T |
21235558 |
cttttgcaactgttacttgagcattgttattatgtcactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgag |
21235476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 129
Target Start/End: Complemental strand, 32151412 - 32151291
Alignment:
| Q |
8 |
gtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaaga |
107 |
Q |
| |
|
|||||||| | |||||||||||| | ||| || | ||||||||||| ||||||||| ||| | | ||||||||||||||||| |||||||||| |||| |
|
|
| T |
32151412 |
gtgaagctgcgtggaatgaacttcgaagtttccaatctggaggtgttaaacttgtcatgtacaaggtttgatgatgaaacactctatgtgatctcaaaga |
32151313 |
T |
|
| Q |
108 |
attgttgcgggcttttggaact |
129 |
Q |
| |
|
|||| | ||||||||| |||| |
|
|
| T |
32151312 |
gttgtagtgggcttttgcaact |
32151291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 201
Target Start/End: Original strand, 34936164 - 34936344
Alignment:
| Q |
21 |
gaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggct |
120 |
Q |
| |
|
|||||| ||||| |||||| | || ||||||||| |||||||| |||| | ||||||||| |||||||| ||| ||| | |||| |||| | ||||| |
|
|
| T |
34936164 |
gaatgatctttgatgttccaaaactagaggtgttggacttgtcatatacaagagttgatgataaaacactctatgccatcgcaaagagttgtcgtgggct |
34936263 |
T |
|
| Q |
121 |
tttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgag |
201 |
Q |
| |
|
|||| |||||||||| || |||||| | ||||||| |||| ||||| | | ||||| ||||| |||||||||||||| |
|
|
| T |
34936264 |
tttgcaactattacttcaaaattgttgtgatgtcacggagaagggagttgagcgtgtggttgaaaattgcacacaattgag |
34936344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 196
Target Start/End: Complemental strand, 44736570 - 44736458
Alignment:
| Q |
84 |
aaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaaga |
183 |
Q |
| |
|
|||||||| ||||||||| |||| |||||| ||||||||| |||| || ||| |||||||| ||||||||| ||| |||||||||||||| | ||| |
|
|
| T |
44736570 |
aaacactcattgtgatctcaaagagttgttgtgggcttttgtaactggtattgagctattgttataatgtcacaacgaagggagtgaaacatgttgtaga |
44736471 |
T |
|
| Q |
184 |
aaactgcacacaa |
196 |
Q |
| |
|
||| || |||||| |
|
|
| T |
44736470 |
aaattgtacacaa |
44736458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0807 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0807
Description:
Target: scaffold0807; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 1466 - 1643
Alignment:
| Q |
22 |
aatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgat---gatgaaacactccatgtgatctcgaagaattgttgcggg |
118 |
Q |
| |
|
|||||||||||| ||||| |||| ||||||||| |||||||| |||| || |||||| |||||||||||| |||||||||| |||||||||| ||| |
|
|
| T |
1466 |
aatgaactttgtagttcctaagctagaggtgttggacttgtcaaatacaaatgttgatgatgatgaaacactctatgtgatctcaaagaattgttcaggg |
1565 |
T |
|
| Q |
119 |
cttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
||||||||||| ||||| | ||||| ||| |||| | |||||||||||||| |||| | |||||||||| |||| |
|
|
| T |
1566 |
attttggaactaagactgataaattgtgattgggtcatagagaaaggagtgaaagatgtcgtggaaaactgcaaacaa |
1643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0295 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0295
Description:
Target: scaffold0295; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 605 - 800
Alignment:
| Q |
1 |
ttcaagagtgaagctacttggaatgaactttgttgttccccagctggaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatc |
100 |
Q |
| |
|
|||||||||||| |||||| |||| |||||| ||||| | | |||||||| ||||||||| |||| | || ||||||||||||||| || ||||| |
|
|
| T |
605 |
ttcaagagtgaaactacttagaataaactttaaagttcctgaattagaggtgtttaacttgtcacatacaagtgtcgatgatgaaacactctatatgatc |
704 |
T |
|
| Q |
101 |
tcgaagaattgttgcgggcttttggaactattactgaaagattgttattatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaa |
196 |
Q |
| |
|
|||||||||||||| ||||| || |||| |||||| || ||||| || | |||| | |||| || ||||||||||| | |||||||||||||||| |
|
|
| T |
705 |
tcgaagaattgttgtgggctattacaactgttactggaaaattgtgatgaagtcatagagaatggtgtgaaacatgtagtagaaaactgcacacaa |
800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 202
Target Start/End: Complemental strand, 39256 - 39101
Alignment:
| Q |
47 |
gaggtgttgaacttgtcagatacgaaggttgatgatgaaacactccatgtgatctcgaagaattgttgcgggcttttggaactattactgaaagattgtt |
146 |
Q |
| |
|
||||||||||||||| || ||| |||||| ||||||||||||| |||||||||| |||| |||| | ||||||||| | || ||||| || | |||| |
|
|
| T |
39256 |
gaggtgttgaacttgacatttacaaaggttaatgatgaaacactttatgtgatctcaaagagttgtagtgggcttttgcacctgatactggaaaaatgtt |
39157 |
T |
|
| Q |
147 |
attatgtcacaaagaaaggagtgaaacatgtggaagaaaactgcacacaattgaga |
202 |
Q |
| |
|
| |||||||| ||| |||||||||||||||| | | |||||||| ||| ||||| |
|
|
| T |
39156 |
ctcgtgtcacaatgaagggagtgaaacatgtggtaaacaactgcacgcaactgaga |
39101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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