View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1910_high_88 (Length: 224)
Name: NF1910_high_88
Description: NF1910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1910_high_88 |
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Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 7424454 - 7424629
Alignment:
| Q |
35 |
catttaaattttactaaatcattaggttaagttgttaactgcnnnnnnnntcgttgttggtgtttgtcaaatgagtgatttttgtcgttcaagcaactat |
134 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7424454 |
catttaaattttactaaatcattaggttaagttgttaactgcaaaaaaaatagttgttggtgtttgtcaaatgagtgatttttgtcgttcaagcaactat |
7424553 |
T |
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| Q |
135 |
gccaacatagtctgattccaaaaatgaaaatgc--tatagcgtggactactagcgaagacaaccctccttgaatat |
208 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
7424554 |
gccaacatagtctgattccaaaaatgaaaatgctatatagcgtggactactagcgaagacaaccctccttgaatat |
7424629 |
T |
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