View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1910_low_37 (Length: 352)
Name: NF1910_low_37
Description: NF1910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1910_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 1 - 340
Target Start/End: Original strand, 37722270 - 37722609
Alignment:
| Q |
1 |
aaaatgtgaccaaacagtttcgcccaaaagctcaattatgcatgttgagatagtgataaatataataaatatggttttaatgagctgcttaagattgtct |
100 |
Q |
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| T |
37722270 |
aaaatttgaccaaacagtttcgcccaaaagctcaattatgcatgttgatatagtgataaatataataaacatggttttaatgaactgcttaagattgtct |
37722369 |
T |
|
| Q |
101 |
tacatttgcttttttcttcctttctcacgtcaaatttacacattttctcccttttcatatatgttttccctttcgaaattctttgccgcgacagtgacat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37722370 |
tacatttgcttttttcttcctttctcacgtcaaatttacacattttctcccttttcatatatgttttccctttcgaaattctttgccgcgacagtgacat |
37722469 |
T |
|
| Q |
201 |
ccaaactgtttcatccgaattcaaccacctttgcataagcaacgttgtattcttttgattggagatgacaattgaattcatttatctatcgttgatctca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
37722470 |
ccaaactgtttcatccgaattcaaccacctttgcataagcaacgttgtattcttttgattagagatgacaattgaattcatttatctatcgttgatctca |
37722569 |
T |
|
| Q |
301 |
ctacaaattcatcaaaatttatcatttacaaaataatatt |
340 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
37722570 |
ctacaaattcatcaaaatttatcatttacaaaataatatt |
37722609 |
T |
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