View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1910_low_98 (Length: 222)
Name: NF1910_low_98
Description: NF1910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1910_low_98 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 42800509 - 42800730
Alignment:
| Q |
1 |
gttgttaggggggtggatttttcttgcaatatagttgctacttaaaatgtcggtttaatggattcttgtttataatatacaaatttgttataaatgtggt |
100 |
Q |
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| T |
42800509 |
gttgttaggggggtggatttttcttgcaatatagttgctacttaaaatgtcggtttaatggattcttgtttataatatacaaatttgttataaatgtgat |
42800608 |
T |
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| Q |
101 |
tattgtctataatgttgtttattatagtggttgagtactactcccagttaaagaattttcatattataaacctatgactaatcaaatctctttaatcaga |
200 |
Q |
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| T |
42800609 |
tattgtctataatgttgtttattatagtggttgagtactactcccagttaaaggattttcatattataaacctatgactaatcaaatctctttaatcaga |
42800708 |
T |
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| Q |
201 |
gaagaaacttcaaaaattcctt |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
42800709 |
gaagaaacttcaaaaattcctt |
42800730 |
T |
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